BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G24580.1
Length=1137
Score E
Sequences producing significant alignments: (Bits) Value
Ahg342623 jgi|Araly1|342623|fgenesh1_pg.C_scaffold_3002386 1303 0.0
Ahg930559 jgi|Araly1|930559|scaffold_303016.1 891 0.0
Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1 481 6e-135
Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461 455 3e-127
Ahg930557 jgi|Araly1|930557|scaffold_303014.1 298 6e-80
Ahg930371 jgi|Araly1|930371|scaffold_302828.1 233 2e-60
Ahg333377 jgi|Araly1|333377|fgenesh1_pm.C_scaffold_672000001 233 2e-60
Ahg314206 jgi|Araly1|314206|fgenesh1_pm.C_scaffold_1002986 213 2e-54
Ahg342182 jgi|Araly1|342182|fgenesh1_pg.C_scaffold_3001945 202 5e-51
Ahg930556 jgi|Araly1|930556|scaffold_303013.1 167 2e-40
Ahg327685 jgi|Araly1|327685|fgenesh1_pm.C_scaffold_6002905 100 2e-20
Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1 73.1 4e-12
Ahg929120 jgi|Araly1|929120|scaffold_301577.1 71.3 1e-11
Ahg479548 jgi|Araly1|479548|fgenesh2_kg.3__2249__AT3G20400.1 71.3 1e-11
Ahg318995 jgi|Araly1|318995|fgenesh1_pm.C_scaffold_3002011 56.5 4e-07
Ahg930412 jgi|Araly1|930412|scaffold_302869.1 52.8 5e-06
Ahg317222 jgi|Araly1|317222|fgenesh1_pm.C_scaffold_3000238 52.8 5e-06
> Ahg342623 jgi|Araly1|342623|fgenesh1_pg.C_scaffold_3002386
Length=1329
Score = 1303 bits (705), Expect = 0.0
Identities = 1006/1146 (88%), Gaps = 41/1146 (4%)
Strand=Plus/Plus
Query 1 ATGACGAAGATGTCTAATCTCCCTAATGATTTGGCGGAAGAGGTGCTCTCTAGGGTTTCG 60
||||| ||||| |||||||| ||||| ||||||| ||| |||||||||||||||||| ||
Sbjct 1 ATGACTAAGATATCTAATCTTCCTAAGGATTTGGTGGAGGAGGTGCTCTCTAGGGTTCCG 60
Query 61 TTAACATCTCTGAGAAACGTCCGACTT-ACTTGTAAAGATTGGAATACTTTATCTAAAGG 119
||||||||| | ||||| ||||| || ||||| ||| | ||||| | |||||| |||||
Sbjct 61 TTAACATCTTTAAGAAATATCCGA-TTAACTTGCAAAAAGTGGAACATTTTATCCAAAGG 119
Query 120 TGAGAGCTTTGCAAAGAATCACCTTGGTTATCAAGCAATAGTAGCAGCGAA-GGAAAAAG 178
|||||||||||||||||| ||||||||| ||||||||| || |||||| || ||||| ||
Sbjct 120 TGAGAGCTTTGCAAAGAAGCACCTTGGTGATCAAGCAAAAGAAGCAGC-AACGGAAAGAG 178
Query 179 AGTTTATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTTCAC 237
|||||||||||||| |||||||||||||||||||||||||||| |||||||| | |||||
Sbjct 179 AGTTTATGATGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGAGTCAATC-TTCAC 237
Query 238 AATGACATTGAGTCGTGTATTAAGCCTGAAGGTGAGCTTATTAGCTTGGGCGATGAAGTC 297
|||||| ||||||| ||||| |||||||||||||| |||||| |||| | ||| |||| |
Sbjct 238 AATGACGTTGAGTCATGTATAAAGCCTGAAGGTGAACTTATTTGCTTAGACGAAGAAGAC 297
Query 298 GATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGGAAGATAACGAA 357
|||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||
Sbjct 298 GATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATTATGGAAGATAAC--- 354
Query 358 GATAACGCTAAGG-TCGTTCTTTGGAACCCGTATTGGGGGCAAACAC-GGTGGATCGAGT 415
| || ||| | || |||||||||||||||||||||| || | ||||||||| |
Sbjct 355 ----A--CT-AGGATTGTGGTTTGGAACCCGTATTGGGGGCATAC-CTGGTGGATCGTGC 406
Query 416 CTACAAATAATTTCCACAAATTGGACATGTATACGTATGCTCTCGGATACAAGAAGAGCA 475
||||| |||||||||||||||||||| | |||||||||||||| ||||||||| ||||||
Sbjct 407 CTACACATAATTTCCACAAATTGGACGTTTATACGTATGCTCTTGGATACAAGCAGAGCA 466
Query 476 GCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTGATTTTTCTCCCACTTGTTCTG 535
|||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 467 GCAAATCATGTCGCAGCTACAAAATCTTGAGATTTATTGATTTTTCTCGCACTTGTTTTG 526
Query 536 AGTTCAAAATCTACAATATCAACTCTGATTCATGGAAGGTTCTTGATGTGTCTCCAGACT 595
| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 527 AATTCAAAATCTACAATATAAACTCTGATTCATGGAAGGTTCTTGATGTCTCTCCAGATT 586
Query 596 GGAAGATAGATTCTTATATTCGTGGCGTGTCTCTCAAGGGAAATACATACTGGATTGCTA 655
|||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||
Sbjct 587 GGAAGATAGATTCTTATAGTCGTGGCGTGTCTCTCAAGGGAAATACGTACTGGTTTGCTA 646
Query 656 GAGAGAGGCACGGATACGGCCA-TACTTTCTTAGTCTGTTTTGATTTCACAAGAGAGAGA 714
|||||||||| ||| | | || |||||||||||||||||||||||||||||||||||||
Sbjct 647 GAGAGAGGCAAGGA-A--G-CAGTACTTTCTTAGTCTGTTTTGATTTCACAAGAGAGAGA 702
Query 715 TTTAGGTCGCGTTTACCTCTGCCGAGTCAGCCGTGTGTTTTAGATACCGTGAGTCTATCT 774
||||| || ||||| |||||||||| |||||||| | |||||||||||||||||||||||
Sbjct 703 TTTAGATCACGTTTTCCTCTGCCGATTCAGCCGTATATTTTAGATACCGTGAGTCTATCT 762
Query 775 AGTGTTAGAGAAGAGCAGCTTGCTGTTTTATTTCAGTGCTCAAG-T-A-CAT---TGGAG 828
|||||||||||||||||||| || |||||||||||| ||||||| | | || |||||
Sbjct 763 AGTGTTAGAGAAGAGCAGCTAGCGGTTTTATTTCAGCGCTCAAGATTATCAGAGATGGAG 822
Query 829 ATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATGCGGTGTTGTGGAACAGCAAGGTG 888
||| |||||||| |||| || ||| |||||||||| ||||||| ||||||||||||||||
Sbjct 823 ATGGAGATCTGGATAACCACGAAACTTGAGCCCAACGCGGTGTCGTGGAACAGCAAGGTG 882
Query 889 TTCTTAGCTGTGGATAT-G-CACTCACTTAAGTTTCAGTTTCAAGTTAGAGCTTCGAGTT 946
|||||||| ||||||| | | || | || ||||||||||||||||||||| | ||||
Sbjct 883 TTCTTAGCAATGGATATTGGC-CTT-C--AA-TTTCAGTTTCAAGTTAGAGCTGCAAGTT 937
Query 947 TCTTTATCGACGAGGAGAAGAGAGTTGTTGTTGTTTTTGATAAAGA-AAAACGTTATTTA 1005
|||||||||| |||||||||| ||||||||| |||||||||||||| |||| | |||||
Sbjct 938 TCTTTATCGATGAGGAGAAGAAAGTTGTTGTGGTTTTTGATAAAGAGAAAAAAT-ATTTA 996
Query 1006 GCGTCCTCTCGCAACAAAGCTTACATCGTTGGAGTGGATGGAACCTGGGAACAAGTGGAC 1065
| |||| ||| ||||| |||||||||| |||||| ||||||||||| ||||||||||||
Sbjct 997 GTGTCCACTCACAACATAGCTTACATCTTTGGAGAGGATGGAACCTTGGAACAAGTGGAT 1056
Query 1066 CTTGGAATGTCTGTAGACAAATTT-GTTTACCCACTTGTGTGCTCTTATGTTCCAAGTTT 1124
|||||| | |||| |||||||||| ||| | ||||||||||||| |||||||||||||||
Sbjct 1057 CTTGGATTATCTGCAGACAAATTTTGTT-ATCCACTTGTGTGCTGTTATGTTCCAAGTTT 1115
Query 1125 AGTGCA 1130
||||||
Sbjct 1116 AGTGCA 1121
> Ahg930559 jgi|Araly1|930559|scaffold_303016.1
Length=1149
Score = 891 bits (482), Expect = 0.0
Identities = 947/1158 (82%), Gaps = 86/1158 (7%)
Strand=Plus/Plus
Query 1 ATGACGAAGATGTCTAATC-TCCCTAATGATTT-GGCGGAAGAGGTGCTCTCTAGGGTTT 58
|||||||||||||| |||| |||| | ||||| ||| || |||||||||| ||| ||
Sbjct 22 ATGACGAAGATGTCCAATCTTCCC-AGCGATTTGGGC-GAGGAGGTGCTCTGTAGAATTC 79
Query 59 CGTTAACATCTCTGAGAAACGTCCGACT-TACTTGTAAAGATTGGAATACTTTA-TCTAA 116
|||| |||||||||||||| |||||| | |||||| ||| | ||||| |||||| || ||
Sbjct 80 CGTTGACATCTCTGAGAAAAGTCCGA-TCTACTTGCAAAAAGTGGAACACTTTATTC-AA 137
Query 117 AGGTGAGAGCTTTGCAAAGAA-TCACCTTGGTTATCAAGCAATAGTAGCAGCGAA-GGAA 174
||||||||||||||| ||||| | |||||||| ||||||||| ||||||||| || ||||
Sbjct 138 AGGTGAGAGCTTTGCGAAGAAGT-ACCTTGGTGATCAAGCAAAAGTAGCAGC-AACGGAA 195
Query 175 AAAGAGTTTATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGT 233
|||||||||||||||||| |||||||||||||||||||||||||||| || ||||| | |
Sbjct 196 AAAGAGTTTATGATGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGCGTCAATC-T 254
Query 234 TCACAATGACATTGAGTCGTGTATTAA-GCCTGAAGGTGAGCTTATTAGCTTGGGCGATG 292
|||||||||| || |||| |||| ||| || ||||||||| ||| ||||||| | ||||
Sbjct 255 TCACAATGACGTTAAGTCATGTA-TAATGCGTGAAGGTGAACTTGTTAGCTTAGAAGATG 313
Query 293 AAGTCGATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGGAAGATA 352
||||| ||||||||||||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct 314 AAGTCAATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATTATGGAAGATA 373
Query 353 ACGAAGATAACGCTAAGGTCGTTCTTTGGAACCCGTATTGGGGGCAAACACGGTGGATCG 412
| || | || ||| ||| ||||||||||||||||||||||||| |||| |||||
Sbjct 374 A------TA-C--TAGGGTTGTTGTTTGGAACCCGTATTGGGGGCAAACCCGGTTGATCG 424
Query 413 AGTCTACAA-ATAATTTCCACAAA-TTGGACAT-GTATACGTATGCTCTCGGATACAAGA 469
|||||| | || ||||||| ||| || | | ||||| |||||||||||||||| |||
Sbjct 425 AGTCTA-AGCATGATTTCCAAAAAATTT-AT-TCGTATATGTATGCTCTCGGATACGAGA 481
Query 470 AGAGCAGCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTGATTTTTCTCCCACTT 529
|||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 482 AGAGCAGCAAGTCATGCCGCATCTACAAAATCTTGAGATTTATTGATTTTTCTCCCACTT 541
Query 530 GT-TCTGAGTTCAAAATCTACAATATCAACTCTGATTCATGGAAGGTTCTTGATGTG-TC 587
| | |||||| ||||||||| |||| |||||| ||||||||| || ||||||||| ||
Sbjct 542 ATGT-TGAGTTTAAAATCTACGATATTAACTCTAATTCATGGAGGGATCTTGATGTCATC 600
Query 588 --TCCAGACTGGAAGATAGATTCTTATATTCGTGGCGTGTCTCTCAAGGGAAATACATAC 645
|||| |||| |||||| | || || |||||| || ||| ||||||||||||| |||
Sbjct 601 ACTCCATACTGTAAGATATACGCTCATCGTCGTGGTGTCTCTGTCAAGGGAAATACGTAC 660
Query 646 TGGATTGCTAGAGAGAGGCACGGATACGGCCATACTTTCTTAGTCTGTTTTGATTTCACA 705
||| |||||||| | |||| || | | |||| || |||||||||||||||
Sbjct 661 TGGTTTGCTAGAAATCGGCA---AT--GT--A-ACTTACT----CTGTTTTGATTTCACT 708
Query 706 AGAGAGAGATTTAGGTCGCGTTTACCTCTGCCGAGTCAGCCGTGTGTT-TT-AGATACCG 763
|||||||||||| || | |||| ||||||||| |||| | | || || |||||| |
Sbjct 709 AGAGAGAGATTTGGGCCATGTTTGCCTCTGCCGTTTCAGTT-T-TATTATTCAGATACTG 766
Query 764 TGAGTCTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATTTCAGTGCTCA-AGTACA 822
| |||||||||||||| ||||||||||||||||| ||||||||||| ||||| | ||||
Sbjct 767 TCAGTCTATCTAGTGTCAGAGAAGAGCAGCTTGCGGTTTTATTTCAATGCTCCTA-TACA 825
Query 823 TTGGAGATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATGCGG-TGTTGTGGAACAG 881
|| | ||||| | || || |||||||| || ||| ||| |||||||||
Sbjct 826 TT--A----CAGAT--G---AA-AA------TTGAGCCCTAT-CGGGTGTCGTGGAACAG 866
Query 882 CAAGGTGTTCTTAGCTGTGGATATGCACTCACTTAAGT--TT-CAGTTTCAAGTTAGAGC 938
|||||||||||||| ||||||||| || ||||| | || |||||||| ||||| ||
Sbjct 867 AAAGGTGTTCTTAGCAGTGGATATGAACCCACTTGTTTCCTTTCAGTTTCAGGTTAGTGC 926
Query 939 TTCGAGTTTCTTTATCGACGAGGAGAAGAGAGTTGTTGTTGTTTTTGATAAAGA-AAA-A 996
| |||||||||| || ||||||||||| | ||| | ||||||||||||||||| ||| |
Sbjct 927 TGCGAGTTTCTTCATTGACGAGGAGAATAAAGTCGCCGTTGTTTTTGATAAAGACAAAGA 986
Query 997 CG-TT-ATTTAGCGTCCT-CTCGCAACAAAGCTTACATCGTTGGAGTGGATGGAACCTGG 1053
| || | | | | ||| |||||||| |||||||||||||||||||||||||| || |
Sbjct 987 AGGTTTAATGAAC--CCTACTCGCAACGTAGCTTACATCGTTGGAGTGGATGGAATCTTG 1044
Query 1054 GAACAAGTGGACCTTGGAATGTCTGTAGACAAATTT-GTTTACCCACTTGTGTGCTCTTA 1112
||| ||||||| |||||| | |||| || ||||||| ||| |||||||||||||||||||
Sbjct 1045 GAAGAAGTGGATCTTGGAGTATCTGCAGCCAAATTTTGTT-ACCCACTTGTGTGCTCTTA 1103
Query 1113 TGTTCCAAGTTTAGTGCA 1130
|||||| |||||||||||
Sbjct 1104 TGTTCCGAGTTTAGTGCA 1121
> Ahg479258 jgi|Araly1|479258|fgenesh2_kg.3__1959__AT3G19470.1
Length=1263
Score = 481 bits (260), Expect = 6e-135
Identities = 890/1175 (76%), Gaps = 119/1175 (10%)
Strand=Plus/Plus
Query 6 GAAGATGTCTAATCTCCCTAA-TGATTTGGCGGAAGAGGTGCTCTCTAGGGTTTCGTTAA 64
||||||||| ||||| || || |||||| |||| |||||||||| ||| || |||| |
Sbjct 76 GAAGATGTCCAATCTTCC-AAGAGATTTGTCGGAGGAGGTGCTCTGTAGAATTCCGTTGA 134
Query 65 CATCTCTGAGAAAC-GTCCGACT-TACTTGTAAAGATTGGAATACTTTATCTAAAGGTGA 122
|||||||||| | |||||| | |||||| ||| | |||| |||||||| ||| |||
Sbjct 135 CATCTCTGAG-GCCTGTCCGA-TCTACTTGCAAAAAGTGGAGCACTTTATCCAAATGTGG 192
Query 123 GAGCTTTGCAAAGAATCACCTTGGTTATCAAGCAATAGTAGCAGCGAAGGAAAAAGAGTT 182
||||||||||||||| |||||| | |||||||| ||||||| ||| | ||| |||||
Sbjct 193 GAGCTTTGCAAAGAAGCACCTT-G--CTCAAGCAAAAGTAGCA--GAA-GCAAAGGAGTT 246
Query 183 TATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTTCACAATG 241
||| ||||| |||||| | ||||||||||||||||||| ||||||| | |||| ||
Sbjct 247 CATGGTGGTCATGATGAAGAATTTTAGGGTTTATTTGATGAGAGTCAATC-TTCAAAAC- 304
Query 242 ACA-TTGAGTCGT---GTATTAAGC-CTGAAGGTGAGCTTATTAGCTTGGGCGATGAAGT 296
|| |||| || | |||| || | | |||| | | |||||| |||| |||||||| |
Sbjct 305 ACGGTTGAATCATCATGTATAAAACGC-GAAGCTAAACTTATTGGCTTAGGCGATGATGA 363
Query 297 -C--GATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGGAAGATAA 353
| ||| |||||||||||||||||||||||||||||||| ||||||||| | | | |
Sbjct 364 ACTTGATATATCTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATCA-GCA---TCA 419
Query 354 CGAA-GATAACG-CTAAGG-TCGTTCTTTGGAACCCGTATTGGGGGCAAACACGGTGGA- 409
| || || || | ||| || |||| |||||||||| ||||||||||| || || | |
Sbjct 420 CCAAAGACAA-GACTA-GGCTCGTGGTTTGGAACCCCTATTGGGGGCATACCCG-TCCAA 476
Query 410 TCGAGTCTACAAAT-AATTTCCACAAATTGGACATG-TATACGTATGCTCTCGGATACAA 467
||||| | ||| || |||| | ||||| | || | | ||| ||||||||||||||||| |
Sbjct 477 TCGAGCCCACACATCAATT-CAACAAACTCGATA-GCTATTCGTATGCTCTCGGATACGA 534
Query 468 GAAGAGCAGCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTGATTT-TTCTCCCA 526
|||||||||||||| || | | | ||| ||||||| |||| | || || | |
Sbjct 535 CAAGAGCAGCAAATC---CC--A-C-A-AAA-TCTTGAGGGGTATT-ACTTGTT-TGA-A 582
Query 527 CTTGTTCTGAGTTCAAAATCTACAATATCAACTCTGATTCATGGAAGGTTCTTGATGTGT 586
| || | |||||||||| || | |||||||||||||||| ||||||||||||
Sbjct 583 ---GCCCT---T-CAAAATCTACGATTTTAACTCTGATTCATGGAGGGTTCTTGATGTCA 635
Query 587 CTCCAGACTGGAAGATA-G-ATTCTTATATTCGTGGCGTGTCTCTCAAGGGAAATACATA 644
||||||||||| | || | | | || | | |||||||||||||||||||||| | ||
Sbjct 636 CTCCAGACTGGCACTTAAGGACTATTC-AC-CATGGCGTGTCTCTCAAGGGAAATGCGTA 693
Query 645 CTGGATTGCTAGA-GAGAGGCA--CGGATAC--G-GCCATA--C--TTT---CTTAGTCT 691
|||| ||||| || |||| | | | || || | | ||| | ||| ||||||||
Sbjct 694 CTGGTTTGCT-GAAGAGAAGTATTCCGAAACCAGAGAAATAGACGATTTTTTCTTAGTCT 752
Query 692 GTTTTGATTTCACAAGAGAGAGATTTAGGTCGCGTTTACCTCTGCCGAGTCAGCCGTG-T 750
||||||||||||||||||||| |||| || ||| ||| ||||| ||| | || || |
Sbjct 753 GTTTTGATTTCACAAGAGAGACATTTGGGCCGCCTTTGCCTCTTCCGTTTGAGTT-TGCT 811
Query 751 GTTT-T-A-GATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATTT 807
|||| | | ||| | ||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 812 GTTTCTGAAGATGCTATGAGTGTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATAT 871
Query 808 CAGT-GCTCA-AGTACATTGGAGATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATG 865
||| | | | |||||| ||||| |||||||||| || | || ||||||||||| |
Sbjct 872 CAGCCG-TGGGA-TACATTAAAGATGGAGATCTGGGTTACGTCTAAGATTGAGCCCAACG 929
Query 866 CGGTGTTGTGGAACAGCAAGGTGTTCTTAGCTGTG-GAT-ATG-CA-CTCACTTAAGTT- 920
|||| | ||||||||||||||||||||| | ||| | | | || |||| || |
Sbjct 930 CGGTCTCCTGGAACAGCAAGGTGTTCTTATCAGTGAGTTTAAAACAACTCA-TTG-GCCC 987
Query 921 TCAGTTTCAAGTTAGAGCTTCG--AGTTTCTTTATCGACGAGGAGAAGAGAGTTGTTGTT 978
||||||||| || | || | |||||||| || ||||||||||||| ||| | |||
Sbjct 988 TCAGTTTCATTTTT-AT-TTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTG 1045
Query 979 GTTTTTGATAAAGA--A-AAACGTTATTTAGCGTCCTCTCGCAACAAAGCTTACATCGTT 1035
|||||||||||||| | ||| | || |||| | |||| ||||||||| ||
Sbjct 1046 GTTTTTGATAAAGACTACAAA-GATA---AGCG-C-------AACATGGCTTACATCATT 1093
Query 1036 GGAGTGGATGGAACCTGGGAACAAGTGGACCTTGGA-ATGTCTGTAGACA-AATTTGTTT 1093
|||||||||||| ||| || ||||||| |||||| | || |||| || ||||
Sbjct 1094 GGAGTGGATGGATCCTTTAAAGAAGTGGATCTTGGAGAA-TC---AGACGTAAGGTGTT- 1148
Query 1094 ACCCACTTGTGTGCTCTTATGTTCCAAGTTTAGTG 1128
||||||| ||||||||||||||||||||| |||||
Sbjct 1149 ACCCACTCGTGTGCTCTTATGTTCCAAGTCTAGTG 1183
> Ahg342698 jgi|Araly1|342698|fgenesh1_pg.C_scaffold_3002461
Length=1110
Score = 455 bits (246), Expect = 3e-127
Identities = 609/774 (79%), Gaps = 66/774 (9%)
Strand=Plus/Plus
Query 1 ATGACGAAGATGTCTAATCTCCCTA-ATGATTTGGCGGAAGAGGTGCTCTCTAGGGTTTC 59
||||||||||| || ||||| |||| | ||||||||||| |||||||||| || | || |
Sbjct 1 ATGACGAAGATATCCAATCTTCCTAGA-GATTTGGCGGAGGAGGTGCTCTGTAAGATTCC 59
Query 60 GTTAACATCTCTGAGAAAC-GTCCGACT-TACTTGTAAAGATTGGAATACTTTATCTAAA 117
||| ||||||||| | ||| ||||| | ||||| ||| | ||||| |||||||| |||
Sbjct 60 GTTGACATCTCTGCG-AACTATCCGA-TCCACTTGCAAAAAGTGGAACACTTTATCCAAA 117
Query 118 GGTGAGAGCTTTGCAAAGAA-TCACCTTGGTTATCAAGCAATAGTAGCAGCGAA-GGAAA 175
|||||| ||||||||||| | |||||||| ||||||||| |||||||| || |||||
Sbjct 118 TATGAGAGTTTTGCAAAGAAGT-ACCTTGGTGATCAAGCAAAAGTAGCAG-AAAGGGAAA 175
Query 176 AAGAGTTTATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTT 234
|||||||||| ||||| |||||||| ||||||||||||||||||| |||| || | ||
Sbjct 176 GAGAGTTTATGGTGGTCATGATGATGAATTTTAGGGTTTATTTGATGAGAGTTAATC-TT 234
Query 235 C---ACAATG-ACATTGAGTCGTGTATTAAGCCTGAAGGTGAGCTTATTAGCTTGGGCGA 290
| |||||| | | | || ||||| |||| ||||| ||| ||||||||||| || ||
Sbjct 235 CAAAACAATGTTGAATCA-TCATGTATAAAGCGTGAAGCTGAACTTATTAGCTTAGGTGA 293
Query 291 TGAAGTCGATGTATCTCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGGAAGA 350
|||||| ||| ||||||||||||||||||| |||||||||||| ||||||||| | |
Sbjct 294 TGAAGTTGATATATCTCAAGTCTTTCACTGTGACGGTTTATTGTTATGCATCA--G--CA 349
Query 351 T-AACGAAGATAACG-CTAAGG-TCGTTCTTTGGAACCCGTATTGGGGGCAAACACGGTG 407
| | | |||| || | || ||| |||| ||||||||||||||||||| || || |||
Sbjct 350 TCACCAAAGACAA-GACT-AGGCTCGTGGTTTGGAACCCGTATTGGGGACATACCCGGAC 407
Query 408 GATCG-AGTCTACAAATAATTTCCACA-AATTGGACATG-TATACGTATGCTCTCGGATA 464
||||| | || ||| |||| || || | || | || | | |||| |||||||||||||||
Sbjct 408 GATCGAACTC-ACACATAACTTACAGATAA-TCGATA-GATATATGTATGCTCTCGGATA 464
Query 465 CAAGAAGAGCAGCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTGA-TT--T-TT 520
||| ||||||||||||| | | | ||||||||||||| || ||| | || |
Sbjct 465 CAACAAGAGCAGCAAAT-----C-C--C-ACAAAATCTTGAGGTTCATT-ACTTACTGGG 514
Query 521 CTCCCACTTGTT-CTGAGTTCAAAATCTACAATATCAACTCTGATTCATGGAAGGTTCTT 579
||||| || || ||||||||||||||| || | |||||| ||||||||| |||||||
Sbjct 515 ATCCCAATT-TTGAAGAGTTCAAAATCTACGATTTGAACTCTAATTCATGGAGGGTTCTT 573
Query 580 GATGTGTCTCCAGACTGGAAGATAGATTCTTA-TATTCGTGGCGTGTCTCTCAAGGGAAA 638
||||| |||||||||||| |||| | || || || | |||||||||||||||||||||
Sbjct 574 GATGTCACTCCAGACTGGACGATA-AGTCATATTAACCATGGCGTGTCTCTCAAGGGAAA 632
Query 639 TACATACTGGATTGCT-A-GAG-AG-A----G--GCACG--GATA-CGGCCATACTTTCT 685
| | |||||| ||||| | ||| || | | || | || | || |||| |||||
Sbjct 633 TGCGTACTGGTTTGCTAATGAGAAGTATTCTGAAACAAGAAGA-ACCGACCATTTTTTCT 691
Query 686 TAGTCTGTTTTGATTTCACAAGAGAGAGATTTAGGTC-GCGTTTACCTCTGCCG 738
||||||||||||||||||||||||||| |||| || | || ||| ||||| |||
Sbjct 692 TAGTCTGTTTTGATTTCACAAGAGAGACATTT-GGACCGCTTTTGCCTCTTCCG 744
Score = 139 bits (75), Expect = 4e-32
Identities = 244/322 (76%), Gaps = 26/322 (8%)
Strand=Plus/Plus
Query 819 TACATTGGAGATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATGCGGTGTTGTGGAA 878
|||||| ||||| |||||||| | || | || ||||||||||| | ||||| ||||||
Sbjct 795 TACATTAAAGATGGAGATCTGGATTACGTCTAAGATTGAGCCCAACGTGGTGTCGTGGAA 854
Query 879 CAGCAAGGTGTTCTTAGCTGTG-G-AT--ATGCACTCACTTAAGTTTCAGTTTCAAGTTA 934
|||||||||||||||| | ||| | || | ||||| || |||||||| ||||
Sbjct 855 CAGCAAGGTGTTCTTATCAGTGAGTATAAAAAAACTCA-TTGCCCCTCAGTTTC-AGTTT 912
Query 935 GAGCTT--CGAGTTTCTTTATCGACGAGGAGAAGAGAGTTGTTGTTGTTTTTGATAAAGA 992
| ||| ||||||||| || ||||||||||||| ||| | ||| ||||||||| |
Sbjct 913 TA-CTTGGGGAGTTTCTTCATTGACGAGGAGAAGAAAGTCGCTGTGGTTTTTGAT----A 967
Query 993 AAAACGTTATTTAGCGTCCTC-TCGCAACAAAGCTTACATCGTTGGAGTGGATGGAACCT 1051
|| || || | || || |||| || |||||||||| |||||||||||||| |||
Sbjct 968 AATAC--TA--CAACG--ATCGGCGCAGCATAGCTTACATCATTGGAGTGGATGGATCCT 1021
Query 1052 GGGAA-CAAGTGGACCTTGGA-ATGTCTGTAGAC-AAATTTGTTTACCCACTTGTGTGCT 1108
|| | |||||| || ||| | || | | || ||| || |||||||||||||||||
Sbjct 1022 TCAAAGC-AGTGGATCTCGGAGA-ATCGGCATACGCAATGTG-TTACCCACTTGTGTGCT 1078
Query 1109 CTTATGTTCCAAGTTTAGTGCA 1130
|||||||||||||| |||||||
Sbjct 1079 CTTATGTTCCAAGTATAGTGCA 1100
> Ahg930557 jgi|Araly1|930557|scaffold_303014.1
Length=643
Score = 298 bits (161), Expect = 6e-80
Identities = 479/625 (77%), Gaps = 52/625 (8%)
Strand=Plus/Plus
Query 534 TGAGTTCAAAATCTA-CAATATCAACTCTGATTCATGGAAGGTTCTTGATGTGTCTCCAG 592
||||| ||||||||| | | | |||||||||||||||| |||| | ||||| ||||||
Sbjct 7 TGAGTACAAAATCTATGACT-TTAACTCTGATTCATGGAGGGTTATCGATGTCACTCCAG 65
Query 593 ACTGGAAGATAG-ATTCTTAT-ATTCGTGGCGTGTCTCTCAAGGGAAATACATACTGGAT 650
|||||| || | ||| |||| | |||||||| ||||||||||||||||||| ||| |
Sbjct 66 ACTGGACTAT-GTATTTTTATGA-CCGTGGCGTCTCTCTCAAGGGAAATACAT--TGGTT 121
Query 651 TGCTAGAGAGAGGCA-CGGATACG--GCCA-TACTTTCTTAGTCTGTTTTGATTTCACAA 706
||||| | ||| || | || | | | |||||||||| ||||||||||||| ||||
Sbjct 122 TGCTA-A-AGA-CCAGCTTTTA-GAAGAAAGTACTTTCTTAATCTGTTTTGATTTTACAA 177
Query 707 GAGAGAGATTTAGG-TCGCGTTTACCTCTGCCG-AGTCAGCCGTGTGTTTT--AGATACC 762
| ||||||||| || ||| ||| || ||||| | | || ||| |||| || |||
Sbjct 178 GCGAGAGATTT-GGACCGCATTTGTCTATGCCGTA-TGAG--TTGTATTTTGAAGGTACT 233
Query 763 GTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTTGCTGTTTTATTTCAGTGCTCAAG-TAC 821
| ||||||||||||||| | ||||||||||||||| ||||| ||||| | | | |||
Sbjct 234 GCGAGTCTATCTAGTGTCAAAGAAGAGCAGCTTGCAGTTTTGTTTCAACG-TTGGGATAC 292
Query 822 ATTGGAGAT-GCAGATCTGGGTAACAACCAAAATTGAGCCCAATGCGGTGT-TGTGGAAC 879
||| ||||| | | || ||| | || || || ||||||||||| ||||||| | ||||||
Sbjct 293 ATTAGAGATAG-AAATATGGATTACGACTAAGATTGAGCCCAACGCGGTGTCT-TGGAAC 350
Query 880 AGCAAGGTGTTCTTAGCTGTGGATAT--G--CACTCACTTAAG-TTTCAGTTTCA-AGTT 933
||||||||||||||||| ||| |||| | || |||||| | ||| | ||||| | ||
Sbjct 351 AGCAAGGTGTTCTTAGCCGTGAATATGAGATCATTCACTT--GCTTTGACTTTCAGATTT 408
Query 934 AG---A-GC-TTCGAGTTTCTTTATCGACGAGGAGAAGAGAGTTGTTGTTGTTTTTGAT- 987
| | | | |||||||||| || ||| ||||||||| ||| | || || ||||||
Sbjct 409 TGCTCACACATGCGAGTTTCTTCATTGACAAGGAGAAGAAAGTCGCCGTAGTGTTTGATA 468
Query 988 -AAAGAAA-AACGTTA-TTTAGCGTCCTCTCGCAACAAAGCTTACATCGTTGGAGTGGAT 1044
||| ||| |||| | | | | || |||||| | ||||||||||||||||||||||
Sbjct 469 AAAACAAAGAACGCAACGTAAAC-CCCACTCGCACCGTAGCTTACATCGTTGGAGTGGAT 527
Query 1045 GGAACCTGGGAACAAGTGGACCTTGGA-ATGTCTGTAGACAAA-TTTGTTTACCCACTTG 1102
||| ||| | || ||| || |||||| | | || ||||||| ||| ||| |||||||
Sbjct 528 GGATCCTTGAAAGAAGCCGATCTTGGAGA-ATATGGAGACAAACATTG-TTATCCACTTG 585
Query 1103 TGTGCTCTTATGTTCCAAGTTTAGT 1127
|||||||||||||||||||||||||
Sbjct 586 TGTGCTCTTATGTTCCAAGTTTAGT 610
> Ahg930371 jgi|Araly1|930371|scaffold_302828.1
Length=984
Score = 233 bits (126), Expect = 2e-60
Identities = 363/472 (77%), Gaps = 38/472 (8%)
Strand=Plus/Plus
Query 681 TTTCTTAGTCTGTTTTGATTTCACAAGAGAGAGATTTAGGTCGCGTTTACCTCTGCCGAG 740
||||||| |||||||||||||||||||||||| ||||||| ||||||| ||||||||| |
Sbjct 499 TTTCTTACTCTGTTTTGATTTCACAAGAGAGACATTTAGGCCGCGTTTGCCTCTGCCG-G 557
Query 741 -TCAGCCGTGTGTTTTAGATAC-C-GTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTTGC 797
| || ||| | || |||||| | || | | |||||||||||||||| |||||||||||
Sbjct 558 TTGAGTCGTATCTTGAAGATACTCTGTTA-T-TATCTAGTGTTAGAGATGAGCAGCTTGC 615
Query 798 TGTTTTATTTCAGTGC-TCA-AG-TACATTGGAGATGCAGATCTGGGTAACAACCAAAAT 854
|| |||||||| || | | | |||||| ||||| |||||||||| ||||| || ||
Sbjct 616 GGTGTTATTTCA--GCAT-ATGGATACATTACAGATGGAGATCTGGGTGACAACTAAGAT 672
Query 855 TGAGCCCAATGCGGTGTTGTGGAACAGCAAGGTGTTCTTAGCTGTGGATAT----GCACT 910
||||||||| |||||| ||||| ||||||| | |||||| | || ||||| | |||
Sbjct 673 TGAGCCCAACACGGTGTCGTGGAGCAGCAAGTTCTTCTTATCAGTTGATATGAGAGAACT 732
Query 911 CA-CTTAAGTT--TC-A-G-TTTCAAG-TTA-GAGCTTCGAGTTTCTTTATC-GACGAGG 961
|| | | || || | | |||| | ||| | ||| | |||||||| | | || ||||
Sbjct 733 CACCGGCATTTACTCTATGTTTTC--GTTTATG-GCTGCAAGTTTCTTCA-CTGATGAGG 788
Query 962 AGAAGAGAGTTGTTGTTGTTTTTGATAAA-GAAAAACGTTATTTAGCGTCCTCTCGCAAC 1020
|||||| ||||| || |||||||||||| |||||| | | || | | |||||
Sbjct 789 AGAAGAAAGTTGCAGTGGTTTTTGATAAAGGAAAAAAG--AGGAAG-ATGAT-GCGCAAT 844
Query 1021 AAAGCTTACATCGTTGGAGTGGATGGAACCTGGGAACAAGTGGACCTTGGA-ATGTCTGT 1079
||||||||| ||||||| ||||||| ||| | || ||||||| |||||| | |||
Sbjct 845 GCAGCTTACATTGTTGGAGAGGATGGATCCTTGAAAGAAGTGGATCTTGGAGA-ATCTCC 903
Query 1080 AGACAAATTTGT-TTACCCACTTGTGTGCTCTTATGTTCCAAGTTTAGTGCA 1130
| ||||| | | | |||||||||||||||||||||||||||| ||||||
Sbjct 904 AAACAAAAATCTCCGA-CCACTTGTGTGCTCTTATGTTCCAAGTTCAGTGCA 954
> Ahg333377 jgi|Araly1|333377|fgenesh1_pm.C_scaffold_672000001
Length=1047
Score = 233 bits (126), Expect = 2e-60
Identities = 364/474 (77%), Gaps = 36/474 (8%)
Strand=Plus/Plus
Query 678 TACTTTCTTAGTCTGTTTTGATTTCACAAGAGAGAGATTTAGG-TCGCGTTTACCTCTGC 736
|||||||||| ||||||||||||| ||||| ||||||||| || ||| ||| || |||
Sbjct 573 TACTTTCTTAATCTGTTTTGATTTTACAAGCGAGAGATTT-GGACCGCATTTGTCTATGC 631
Query 737 CG-AGTCAGCCGTGTGTTTT--AGATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGC 793
|| | | || ||| |||| || ||| | ||||||||||||||| | |||||||||||
Sbjct 632 CGTA-TGAG--TTGTATTTTGAAGGTACTGCGAGTCTATCTAGTGTCAAAGAAGAGCAGC 688
Query 794 TTGCTGTTTTATTTCAGTGCTCAAG-TACATTGGAGAT-GCAGATCTGGGTAACAACCAA 851
|||| ||||| ||||| | | | |||||| ||||| | | || ||| | || || ||
Sbjct 689 TTGCAGTTTTGTTTCAACG-TTGGGATACATTAGAGATAG-AAATATGGATTACGACTAA 746
Query 852 AATTGAGCCCAATGCGGTGT-TGTGGAACAGCAAGGTGTTCTTAG-C-TG----TG-GAT 903
||||||||||| ||||||| | |||||||||||||||||||||| | || || |||
Sbjct 747 GATTGAGCCCAACGCGGTGTCT-TGGAACAGCAAGGTGTTCTTAGCCGTGAATATGAGAT 805
Query 904 -ATGCACTCAC-TTAAGTTTCAGTTTCAAG-TTAGAGC-TTCGAGTTTCTTTATCGACGA 959
|| |||| | || | ||||||||| | | | | | | |||||||||| || ||| |
Sbjct 806 CATTCACTTGCTTTGACTTTCAGTTT-TTGCTCACA-CATGCGAGTTTCTTCATTGACAA 863
Query 960 GGAGAAGAGAGTTGTTGTTGTTTTTGAT--AAAGAAA-AACGTTA-TTTAGCGTCCTCTC 1015
|||||||| ||| | || || |||||| ||| ||| |||| | | | | || |||
Sbjct 864 GGAGAAGAAAGTCGCCGTAGTGTTTGATAAAAACAAAGAACGCAACGTAAAC-CCCACTC 922
Query 1016 GCAACAAAGCTTACATCGTTGGAGTGGATGGAACCTGGGAACAAGTGGACCTTGGA-ATG 1074
||| | ||||||||||||||||||||||||| ||| | || ||| || |||||| |
Sbjct 923 GCACCGTAGCTTACATCGTTGGAGTGGATGGATCCTTGAAAAAAGCCGATCTTGGAGA-A 981
Query 1075 TCTGTAGACAAA-TTTGTTTACCCACTTGTGTGCTCTTATGTTCCAAGTTTAGT 1127
| || ||||||| ||| ||| ||||||||||||||||||||||||||||||||
Sbjct 982 TATGGAGACAAACATTG-TTATCCACTTGTGTGCTCTTATGTTCCAAGTTTAGT 1034
> Ahg314206 jgi|Araly1|314206|fgenesh1_pm.C_scaffold_1002986
Length=957
Score = 213 bits (115), Expect = 2e-54
Identities = 166/190 (87%), Gaps = 5/190 (3%)
Strand=Plus/Plus
Query 140 ACCTTGGTTATCAAGCAATAGTAGCAGCGAAGGAAAA-AGAGTTTATGATGGTCCTGATG 198
|||||| | ||||||||| ||||| ||| || ||||| ||| ||| || ||||| |||||
Sbjct 44 ACCTTGATGATCAAGCAAAAGTAGAAGC-AAAGAAAAGAGAATTTCTGGTGGTCATGATG 102
Query 199 ATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTTCACAATGACATTGAGTCGTGTAT 257
||||||||||||||||||||||| || ||||| | ||||||||||| ||||||| |||||
Sbjct 103 ATGGATTTTAGGGTTTATTTGATGCGCGTCAATC-TTCACAATGACGTTGAGTCATGTAT 161
Query 258 TAAGCCTGAAGGTGAGCTTATTAGCTTGGGCGATGAAGTCGATGTATCTC-AAGTCTTTC 316
|||| ||||||||| ||| |||| || |||||||||||||||||||||| |||||||||
Sbjct 162 AAAGCGTGAAGGTGAACTTTTTAGTTTAGGCGATGAAGTCGATGTATCTCTAAGTCTTTC 221
Query 317 ACTGCGACGG 326
||||||||||
Sbjct 222 ACTGCGACGG 231
> Ahg342182 jgi|Araly1|342182|fgenesh1_pg.C_scaffold_3001945
Length=981
Score = 202 bits (109), Expect = 5e-51
Identities = 420/558 (75%), Gaps = 69/558 (12%)
Strand=Plus/Plus
Query 123 GAGCTTTGCAAAGAATCACCTTGGTTATCAAGCAATAGTA---GCAGCGAAGGAAAAAGA 179
||||||||||||||| |||||| | |||||||| |||| ||||| |||||||| ||
Sbjct 27 GAGCTTTGCAAAGAAGCACCTT-G--CTCAAGCAAGAGTAGCTGCAGCAAAGGAAAAGGA 83
Query 180 GTTTATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGA-GTCAA-CGTTCAC 237
||||||| ||||| ||||||||||||||||||||||| |||| | | || || | |||||
Sbjct 84 GTTTATGGTGGTCATGATGATGGATTTTAGGGTTTATCTGATGC-ACGTGAATC-TTCAC 141
Query 238 AATGAC-A--TTGAGTCGTGTATTAAGCCTGAAGGTGA-GCTTA-TTAGCTTG--G--GC 288
| ||| | |||| | || || || | | ||||| | |||| || | | | |
Sbjct 142 TACGACAAGGTTGAATTATGCATGAAACGTCAAGGT-ACACTTATTTTCCCCGACGCCTC 200
Query 289 -GATGAAGTCGATGTATC-TCAAGTCTTTCACTGCGACGGTTTATTGCTATGCATCACGG 346
||| || || ||||| | |||||||||||||||||||||||||||| |||||||| | |
Sbjct 201 AGATCAAATCTATGTA-CGTCAAGTCTTTCACTGCGACGGTTTATTGTTATGCATC-CTG 258
Query 347 AAGATAACGAAGATAACGCTAAGG-TCGTTCTTTGGAACCCGTATTGGGGGCAAACACGG 405
|| | | | || | ||| || ||||| ||| ||||||||||| |||||| |||||
Sbjct 259 AA-AGA-C-AAC----C-CTA-GGCTCGTTGTTTTTAACCCGTATTGTGGGCAACCACGG 309
Query 406 TGGATCGA-GTCTACAAATAATT-TCCACAAATTGGACATGT-ATACGTATGCTCTCGGA 462
|||||||| | | ||| ||||| || | | |||||| || | || ||| | |||| |||
Sbjct 310 TGGATCGAAGCC-ACATATAATAATC-AGAGATTGGA-ATTTTATTCGTTTTCTCTGGGA 366
Query 463 TACAAGAAG-AGCAGCAAATCAAGCCGCAGCTACAAAATCTTGAGATTTATTG-ATTT-- 518
||||| | | | || |||||| || | | | ||| |||||||||||||| || |
Sbjct 367 TACAATA-GCAACACCAAATC---CC--A-C-A-AAA-TCTTGAGATTTATTTTATATCA 416
Query 519 T--TCTCC-CACTT-G--TT---CTGAGTTCAAAATCTACAA-TATCAACTCTGATTCAT 568
| ||| | ||| | || ||||||||||||||||| | | | |||||||||||||
Sbjct 417 TGGTCTTTTCTCTTTGGCTTTGGCTGAGTTCAAAATCTACGACTTT-AACTCTGATTCAT 475
Query 569 GGAAGGTTCTTGATGTGT-CTCCAGACTGGAAGATAGATTCTTATATTCG-TGGCGTGTC 626
||| |||||||||||| | ||| ||||||| | ||||||| ||| || ||| || ||
Sbjct 476 GGAGGGTTCTTGATGT-TACTCGAGACTGGGACATAGATTGGTATCG-CGGTGGTGTCTC 533
Query 627 TCTCAAGGGAAATACATA 644
||||||||||||| ||||
Sbjct 534 TCTCAAGGGAAATGCATA 551
> Ahg930556 jgi|Araly1|930556|scaffold_303013.1
Length=272
Score = 167 bits (90), Expect = 2e-40
Identities = 196/244 (80%), Gaps = 19/244 (8%)
Strand=Plus/Plus
Query 177 AGAGTTTATGATGGTCCTGATGATGGATTTTAGGGTTTATTTGATTCGAGTCAA-CGTTC 235
|||||||||||||||| |||||||||||||||||||||||||||| || ||||| | |||
Sbjct 11 AGAGTTTATGATGGTCATGATGATGGATTTTAGGGTTTATTTGATGCGCGTCAATC-TTC 69
Query 236 ACAATGACATTGAGTCGTGTATTAAGCCTGAAGGTGAGCTTATTAGCTTGGGCGAT---G 292
|||| || |||| || ||||| |||| ||||| | | ||||||||| | | |||| |
Sbjct 70 ACAACAACGTTGAATCATGTATAAAGCGTGAAGCTAAACTTATTAGCCTAGACGATTCAG 129
Query 293 ---AAGTCGATGTATCTCAAGTCT-TTCACTGCGACGGTTTATTGCTATGCATCACGGAA 348
|||| |||||| ||| ||| | |||||||||||||||||||| |||||||||| ||
Sbjct 130 TTGAAGTAGATGTAACTCGAGT-TGTTCACTGCGACGGTTTATTGTTATGCATCACTAAA 188
Query 349 GATAACGAAGATAACGCTAAGGTCGTTCTTTGGAACCCGTATTGGGGGCAAACACGGTGG 408
|| | || | ||||| |||| |||| |||||||||| ||||||||| ||||||
Sbjct 189 GA---C-----TA-CACTAAGTTCGTGGTTTGTAACCCGTATTTGGGGCAAACCCGGTGG 239
Query 409 ATCG 412
||||
Sbjct 240 ATCG 243
> Ahg327685 jgi|Araly1|327685|fgenesh1_pm.C_scaffold_6002905
Length=1017
Score = 100 bits (54), Expect = 2e-20
Identities = 338/465 (73%), Gaps = 60/465 (13%)
Strand=Plus/Plus
Query 681 TTTCTTAGTCTGTTTTGATTTCACAAGAGAGAGATTTAGG-TCGCGTT-TACCTCTGCCG 738
|||| || ||| ||||||||| |||| ||||||||| || ||| || | ||||||||
Sbjct 537 TTTCCTACTCTCTTTTGATTTTACAACCGAGAGATTT-GGACCGC-TTCTGCCTCTGCC- 593
Query 739 AGT-CAGCCG-TGTGTTT-TAGATACCGTGAGTCTATCTAGTGTTAGAGAAGAGCAGCTT 795
| || || | | ||| |||||| || | ||| ||||||||||||||| ||||||||
Sbjct 594 TTTCCA--CGCTTTCTTTGGAGATACTGTCACTCTTTCTAGTGTTAGAGAAAAGCAGCTT 651
Query 796 GCTGTTTTATTTCAG---TGCTCAAGTACATTGG--AGA-TG-C-AGATCTGGGTAACAA 847
|| || | |||||| | || ||||| ||| | | | | |||| ||| | | |
Sbjct 652 GCCGTGCTGTTTCAGAAAT-CTGGTGTACA-TGGATACACCGTCAAGATATGGATTAGTA 709
Query 848 CCAAAATTGAGCCCAATGCGGTGTTGT-GGAACAGCAAG-GTGTTCTTAGCTGTGGATAT 905
| || |||||||||||||| |||| || || | ||| || ||||||||||||| |||||
Sbjct 710 CTAAGATTGAGCCCAATGCAGTGTCGTGGGGA-AGC-AGCTTGTTCTTAGCTGTTGATAT 767
Query 906 G-CACTCACTTAAGTTTCAGTTTCAAGTTAGAGCTTCG-AGTTTCTTTATCGACGAGGAG 963
| || ||| | | | | || || | || | | |||||||| | |||||||||
Sbjct 768 GAAAC-CAC-TCA----CTGGTT----TTCGCGC-TAGCAGTTTCTTCGTTGACGAGGAG 816
Query 964 AAGAGA-GTTGTTGTTGTTTTTGATAAAGAAAAACGTTATTTAGCGT-CCTCTCGCAACA 1021
|||| | || | ||| ||| ||||||||| || | | | || ||||||||||
Sbjct 817 AAGA-ACGTCGCTGTGGTTCTTGATAAAG----AC---A-GT-G-GTAAATCTCGCAACA 865
Query 1022 AAGCTTACATCGTTGGAGTGGATGGA-ACCTGGGAACAAGTGGACCTT-G-GAATGTCT- 1077
||||||||| ||||| | ||||| | || | |||||||||| ||| | ||| |||
Sbjct 866 TTGCTTACATCATTGGAAAGAATGGATA-CTTGAAACAAGTGGATCTTGGTGAA--TCTA 922
Query 1078 GTAGACAAATT-TGTTTACCCACTTGTGTGCTCTTATGTTCCAAG 1121
| | || |||| || ||||||||||||||||||||||||||||||
Sbjct 923 G-AAACCAATTCTG-TTACCCACTTGTGTGCTCTTATGTTCCAAG 965
> Ahg479757 jgi|Araly1|479757|fgenesh2_kg.3__2458__AT3G22421.1
Length=1236
Score = 73.1 bits (39), Expect = 4e-12
Identities = 95/120 (79%), Gaps = 12/120 (10%)
Strand=Plus/Plus
Query 1014 TCGCAACAAAGCTT-ACATCGTTGGAGTGGATGGA-ACCTGGGAACAAGTGGACCTTGGA 1071
|||| ||| || || ||||||| |||| || |||| || | || ||||||| || |||
Sbjct 1005 TCGCGACACAG-TTCACATCGTGGGAGAGGCTGGATACGT-TAAAGAAGTGGATCTAGGA 1062
Query 1072 -ATGTCTGTA-GACAAAT--TTGTTTACCCACTTGTGTGCTCTTATGTTCCAAGTTTAGT 1127
| ||| | ||||||| || ||| |||||||||||||||||||||||||||||||||
Sbjct 1063 GA-ACCTG-ATGACAAATACTT-TTT-CCCACTTGTGTGCTCTTATGTTCCAAGTTTAGT 1118
> Ahg929120 jgi|Araly1|929120|scaffold_301577.1
Length=1237
Score = 71.3 bits (38), Expect = 1e-11
Identities = 45/48 (94%), Gaps = 2/48 (4%)
Strand=Plus/Plus
Query 293 AAGTCGATGTATCTCAA-GTCTTTCACTGCGACGGTTTATTGCTATGC 339
||||||| |||||| || ||||||||||||||||||||||||||||||
Sbjct 301 AAGTCGAGGTATCT-AATGTCTTTCACTGCGACGGTTTATTGCTATGC 347
> Ahg479548 jgi|Araly1|479548|fgenesh2_kg.3__2249__AT3G20400.1
Length=318
Score = 71.3 bits (38), Expect = 1e-11
Identities = 230/319 (72%), Gaps = 28/319 (9%)
Strand=Plus/Plus
Query 829 ATGCAGATCTGGGTAACAACCAAAATTGAGCCCAATGCGGTGTTGTGGAACAGCAAGGTG 888
||| |||||||||| ||||| || ||||||||||| || ||| |||| ||||||| |
Sbjct 1 ATGGAGATCTGGGTTACAACTAAGATTGAGCCCAACACGTTGTCGTGGGGCAGCAAGTTC 60
Query 889 TTCTTAGCTGTGGATATG-CA---CTCA-C-TTAA---GTTTCA-G-TTTCAAG-TTAGA 936
|||||| | ||||||||| | |||| | || |||| | | |||| | ||||
Sbjct 61 TTCTTATCAGTGGATATGAGAGTTCTCACCGGCAATGGGTTT-ATGTTTTC--GTTTAGT 117
Query 937 GCTTCGAGTTTCTTTATCGACGAGGAGAAGAGAGTTGTTGTTGTTTTTGATAAA-G-AAA 994
| | | |||||||| || || |||||||||| | | | ||| |||||| ||||| | |||
Sbjct 118 GGTGCAAGTTTCTTCATTGATGAGGAGAAGAAAATCGCTGTGGTTTTTAATAAAGGCAAA 177
Query 995 AACGTTATTTAGCGTCCTCTCGCAACAAAGCTTACATCGTTGGAGTGGATGGAACCTGGG 1054
|| | | | | | | || ||| ||||| |||| | |||| ||||||| | |
Sbjct 178 GACATGA--T-G-GGGAT-GCGTAACGCAGCTTTCATCATCGGAGAGGATGGATCTTTTA 232
Query 1055 AACAAGTGGACCTT-G-GAATGTCTGTAGACA-AATTTGTTTACCCACTTGTGTGCTCTT 1111
|| ||||||| || | |||| || | | ||| || | | | ||||||||||||||||
Sbjct 233 AAGAAGTGGATTTTGGAGAATCTC-G-AAACAGAA-ATCTCGAACCACTTGTGTGCTCTT 289
Query 1112 ATGTTCCAAGTTTAGTGCA 1130
|||||||||||| | ||||
Sbjct 290 ATGTTCCAAGTTCAATGCA 308
> Ahg318995 jgi|Araly1|318995|fgenesh1_pm.C_scaffold_3002011
Length=1152
Score = 56.5 bits (30), Expect = 4e-07
Identities = 32/33 (97%), Gaps = 0/33 (0%)
Strand=Plus/Plus
Query 308 AAGTCTTTCACTGCGACGGTTTATTGCTATGCA 340
|||| ||||||||||||||||||||||||||||
Sbjct 296 AAGTTTTTCACTGCGACGGTTTATTGCTATGCA 328
> Ahg930412 jgi|Araly1|930412|scaffold_302869.1
Length=665
Score = 52.8 bits (28), Expect = 5e-06
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1103 TGTGCTCTTATGTTCCAAGTTTAGTGCA 1130
||||||||||||||||||||||||||||
Sbjct 572 TGTGCTCTTATGTTCCAAGTTTAGTGCA 599
> Ahg317222 jgi|Araly1|317222|fgenesh1_pm.C_scaffold_3000238
Length=639
Score = 52.8 bits (28), Expect = 5e-06
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 1103 TGTGCTCTTATGTTCCAAGTTTAGTGCA 1130
||||||||||||||||||||||||||||
Sbjct 500 TGTGCTCTTATGTTCCAAGTTTAGTGCA 527
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 42392683704
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5