BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G24780.1
Length=2148
Score E
Sequences producing significant alignments: (Bits) Value
Ahg479996 jgi|Araly1|479996|fgenesh2_kg.3__2697__AT3G24780.1 2656 0.0
Ahg905626 jgi|Araly1|905626|Al_scaffold_0003_2754 1991 0.0
Ahg319184 jgi|Araly1|319184|fgenesh1_pm.C_scaffold_3002200 1369 0.0
Ahg488135 jgi|Araly1|488135|fgenesh2_kg.6__1269__AT5G13210.1 1162 0.0
Ahg899811 jgi|Araly1|899811|Al_scaffold_0004_461 363 4e-99
Ahg948830 jgi|Araly1|948830|scaffold_800717.1 100 4e-20
> Ahg479996 jgi|Araly1|479996|fgenesh2_kg.3__2697__AT3G24780.1
Length=2193
Score = 2656 bits (1438), Expect = 0.0
Identities = 1747/1889 (92%), Gaps = 49/1889 (3%)
Strand=Plus/Plus
Query 1 ATGGCTTCTCAGTTCCCTGGTCCATC-CGAGATCCAAGACTCCAACGCTCCCCTCACATC 59
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
Sbjct 1 ATGGCTTCTCAGTTCCCTGGTCCA-CACGAGATCCAAGACTCCAACGCTCCCCTCACAGC 59
Query 60 TTCTGGTCCCACCAATCCAGTCAATACTTCACCTCCGATGGGACAGACCGAGGAAAGACC 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 TTCTGGTCCCAGCAATCCAGTCAATACTTCACCTCCGATGGGACAGACCGAGGAAAGACC 119
Query 120 CCACACGTACCTCGCCGCTCTCCTCAAGAACATCAACACTTGTCGTCCCAGCGTCCCAAA 179
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 120 CCCCACGTACCTCGCCGCTCTCCTCAAAAACATCAACACTTGTCGTCCCAGCGTCCCAAA 179
Query 180 GGTCTCAAACATCAAGAAATCAACTAAAGTCAACGTCAATCCTGTT--A-------GACC 230
|||||||||| ||||||||||||||||||||||||||||||||||| | ||||
Sbjct 180 GGTCTCAAACGTCAAGAAATCAACTAAAGTCAACGTCAATCCTGTTAGACCGGTTCGACC 239
Query 231 TGTTAGACCGGTTCGACCTATTAGACCGGTTAGACCTGTTAGACCGGTTAGACCTGTTAG 290
|||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TGTTAGGCCGGTTCGGCCTGTTAGACCGGTTAGACCTGTTAGACCGGTTAGACCTGTTAG 299
Query 291 ACGGCGAAGAGTAGATTTAAACAAATCTTCACCTGCGATGGGCTACACTGAGAATAGATC 350
|||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 300 ACGGCGAAAAGTAGATTTAAACATATCTTCACCTGCGATGGGCTACACCGAGAATAGATC 359
Query 351 CGCCACCTACCTCTCCTCAGGTAACCCCTGCCTCGACTTCTTCTTTCACATTGTTCCTTC 410
|||||| |||||||||||||| |||||||| |||||||||||||||||| ||||||||||
Sbjct 360 CGCCACGTACCTCTCCTCAGGCAACCCCTGTCTCGACTTCTTCTTTCACGTTGTTCCTTC 419
Query 411 CACGCCCAAGAAATCTCTGGAGCAGCGGCTAGAGGAGGCTTGGGACCATGATTCTTTAAC 470
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 420 CACGCCCAAGAAATCTCTGGAGCAGCGGCTAAAGGAGGCTTGGGACCATGATTCTTTAAC 479
Query 471 CACTCTCAAGCTTATCTGTAACCTTCGTGGAGTCCGTGGCACTGGAAAATCTGACAAGGA 530
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 CACTCTCAAGCTTATCTGTAACCTTCGAGGAGTCCGTGGCACTGGAAAATCTGACAAGGA 539
Query 531 AGGGTTTTACACGGCGGCGTTGTGGCTCCATGGTCGCCATCCCAAAACCCTAGCTTGTAA 590
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 540 AGGGTTTTACACGGCGGCGTTGTGGCTCCATAGTCGCCATCCGAAAACCCTAGCTTGTAA 599
Query 591 CCTCGAGTCTC-TCTCCAAATTTGGCTATTTTAAAGATTTTCCGGAGATTCTTTACCGGA 649
||||||||| | ||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 600 CCTCGAGTC-CATCTCCAAGTTTGGCTATTTTAAAGATTTTCAAGAGATTCTTTACCGGA 658
Query 650 TTCTACAAGGACCTGAAATCCGCAGTATACAGAAAACGCAAAGGTACGATACAATAGCCG 709
||||||||||| |||||||||||||||| |||||| || || ||||| | ||||||||||
Sbjct 659 TTCTACAAGGATCTGAAATCCGCAGTATCCAGAAATCGGAATGGTACAAGACAATAGCCG 718
Query 710 CAGC-ATCTCTACGTAGAAGATCCCGTTTCTCTAGA----G--GT-G-G-T---CGTGGT 756
|||| || ||| |||||||||||| ||||| ||| | || | | | ||||||
Sbjct 719 CAGCAAT-TCTTCGTAGAAGATCCAAATTCTCGAGAGGCGGTCGTGGTGTTGGCCGTGGT 777
Query 757 TTTGGTGGTGGTCGTAGTAGGGGT--C-G--TCATT--T--T--T-TAAAAAGGTCGGCA 804
|||||| |||||||| | |||||| | | | || | | | | |||||| |||||
Sbjct 778 TTTGGTCGTGGTCGTGGAAGGGGTCGCGGAATGGTTCGTCGTGGTCTTAAAAGGCCGGCA 837
Query 805 GCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGA 864
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 GCCACGAGGGAGCTGAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGA 897
Query 865 GCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCGAAGGCTGCATCTACAAAGTAT 924
||||||||||||||||||||||||||||||||| ||| |||||| |||||||||| ||||
Sbjct 898 GCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCATTGGGGAAGGCCGCATCTACAAGGTAT 957
Query 925 TCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGAACTATTCGCAAATCAA 984
|||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 958 TCTAACGATCCAAAATATAGGTTCCTCCACGAACGTGTCTCTGATCTATTCGCAAATCAA 1017
Query 985 CTAAAGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAACAAAATCTCTCTAGCGGCT 1044
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1018 CTAAGGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAATAAAATCTCTCTAGCGGCT 1077
Query 1045 AAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTTATCTGCGAGAGCATA 1104
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1078 AAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTGCTCTGCGAGAGCATT 1137
Query 1105 GCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTCAC 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 GCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTCAC 1197
Query 1165 TATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTGTTCCTCTCCGGAAGACT 1224
|||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||
Sbjct 1198 TATGCGTACAGAGTTCGTGATCGGCTAAGGAAACAAGTTCTTGTTCCCCTCCGGAAGACT 1257
Query 1225 CTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCAATCTCTCCCTTATAACCGT 1284
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1258 CTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCGATCTCTCCCTTACAACCGT 1317
Query 1285 GTTGCATCAGTGGCGATGAAGTCATACAAGGAGGTTTTCTTGTATCGTGACGAAAAGAGG 1344
||||||||||||||||||||||| ||||| || |||||||||| ||||||| | |||||
Sbjct 1318 GTTGCATCAGTGGCGATGAAGTCGTACAAAGAAATTTTCTTGTACCGTGACGCAGAGAGG 1377
Query 1345 TTTCAGCAATATCTTAACGATGCCAAGACGGGGAAAACGAAGATAGCCGCCGGTGCTGTG 1404
||||||||||||||||| ||||| | || ||||||||||||||||||||| |||||||||
Sbjct 1378 TTTCAGCAATATCTTAAAGATGCGAGGATGGGGAAAACGAAGATAGCCGCGGGTGCTGTG 1437
Query 1405 TTACCTCACGAGATAATCAGAGAGTTAAACGGCGGAGACGGTGG-CAAAGTCGCTGAGCT 1463
||||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||||||
Sbjct 1438 TTACCTCACGAGATAATCAGAGAATTAGACGGCGGAGACGGTGGACAA-GTCGCTGAGCT 1496
Query 1464 GCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAAGGTTCTTTGACCAACTGCATGGC 1523
||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||||
Sbjct 1497 GCAATGGAAACGAATGGTTGATGATCTTAAAAAGAAAGGTTCTTTGACCAACTGCATGGC 1556
Query 1524 TATATGTGACGTTTCGGGATCTATG-AATGGTGAGCCAATGGAGGTTTCAGTCGCCCTTG 1582
||| |||||||||||||| |||||| || |||||||||||||||||||||||||| ||||
Sbjct 1557 TATCTGTGACGTTTCGGGGTCTATGGAA-GGTGAGCCAATGGAGGTTTCAGTCGCACTTG 1615
Query 1583 GATTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATTCAGAC 1642
| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1616 GTTTGCTAGTCTCTGAGTTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATTCAG-C 1674
Query 1643 AAAGTCC-TGAACTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACAGAGTTT-GT 1700
||| || |||| |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1675 AAAAACCCTGAATTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACA-AGTTTCGT 1733
Query 1701 GGAGAGCATGCAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTAA 1760
||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 GGAGAATATGGAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTGATTCTTAA 1793
Query 1761 AGTGGCCGTGGAAAGCAAGCTTAAGCC-GCAAGACATGATCAAGAGGGTGTTTGTGTTCA 1819
||||||||| ||| | ||||| ||||| | |||| |||||||||||||||||||||||||
Sbjct 1794 AGTGGCCGTAGAAGGGAAGCTGAAGCCAG-AAGAGATGATCAAGAGGGTGTTTGTGTTCA 1852
Query 1820 GTGACATGGAGTTTGATGAAGCGTCGACT 1848
||||||||||||||||| |||||||||||
Sbjct 1853 GTGACATGGAGTTTGATCAAGCGTCGACT 1881
Score = 230 bits (124), Expect = 4e-59
Identities = 171/192 (89%), Gaps = 10/192 (5%)
Strand=Plus/Plus
Query 1963 GATTACAAGGTGATTGTGAGAAAGTATAGAGAGAAAGGGTACGGAGAGGCTGTGCCGGAG 2022
||||| ||||||||||||| ||||| | |||||||||||||||||| ||||||||| ||
Sbjct 1930 GATTATGAGGTGATTGTGAGCAAGTACAAAGAGAAAGGGTACGGAGAAGCTGTGCCGCAG 1989
Query 2023 ATTGTGTTTTGGAATCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 2082
|| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1990 ATAGTGTTTTGGAACCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 2049
Query 2083 GTGGCTTTGGTAAGTGGGTTTTCCAA-AA----A--A---TGTTCTTGGATTACGATGGA 2132
||||||||||||||||||||||| || || | | ||||||||||| ||||||||
Sbjct 2050 GTGGCTTTGGTAAGTGGGTTTTCGAAGAATTTGATGAAAATGTTCTTGGATCACGATGGA 2109
Query 2133 GAGATTGATCCC 2144
||||||||||||
Sbjct 2110 GAGATTGATCCC 2121
> Ahg905626 jgi|Araly1|905626|Al_scaffold_0003_2754
Length=2157
Score = 1991 bits (1078), Expect = 0.0
Identities = 1429/1594 (90%), Gaps = 42/1594 (3%)
Strand=Plus/Plus
Query 282 ACCTGTTAGACGGCGAAGAGTAGATTTAAACAAATCTTCACCTGCGATGGGCTACA-CTG 340
|||||| |||| ||||| ||| ||| | | |||||||||| | |||||||||||| | |
Sbjct 288 ACCTGTAAGACCGCGAAAAGTTGATCCATATAAATCTTCACGTCCGATGGGCTACAGC-G 346
Query 341 AGAATAGATCCGCCACCTACCTCTCCTCAGGTAACCCCTGCCTCGACTTCTTCTTTCACA 400
||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 347 AGAATGGATCCGCCACGTACCTCTCCTCAGGCAACCCCTGCCTCGACTTCTTCTTTCACA 406
Query 401 TTGTTCCTTCCACGCCCAAGAAATCTCTGGAGCAGCGGCTAGAGGAGGCTTGGGACCATG 460
|||||||||| ||||| ||| |||||| |||||||||||| ||||||||||||||||||
Sbjct 407 TTGTTCCTTCAACGCCAAAGTTATCTCTAGAGCAGCGGCTACAGGAGGCTTGGGACCATG 466
Query 461 ATTCTTTAACCACTCTCAAGCTTATCTGTAACCTTCGTGGAGTCCGTGGCACTGGAAAAT 520
|| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 467 ATGCCTTAACCACTCTCAAGCTTATCTGTAACCTTCGTGGAGTCCGAGGCACTGGAAAAT 526
Query 521 CTGACAAGGAAGGGTTTTACACGGCGGCGTTGTGGCTCCATGGTCGCCATCCCAAAACCC 580
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 527 CTGACAAGGAAGGGTTTTACACGGCGGCGTTGTGGCTCCATGGTCACCATCCGAAAACCC 586
Query 581 TAGCTTGTAACCTCGAGTCTC-TCTCCAAATTTGGCTATTTTAAAGATTTTCCGGAGATT 639
||||| ||||||||||||| | ||||||| ||||||||||||||||||||||||||||||
Sbjct 587 TAGCTAGTAACCTCGAGTC-CATCTCCAAGTTTGGCTATTTTAAAGATTTTCCGGAGATT 645
Query 640 CTTTACCGGATTCTACAAGGACCTGAAATCCGCAGTATACAGAAAACGCAAAGGTACGAT 699
||||||||||||||||||||| |||||||||||||||| |||||| || || ||||| |
Sbjct 646 CTTTACCGGATTCTACAAGGATCTGAAATCCGCAGTATCCAGAAATCGGAATGGTACAAG 705
Query 700 ACAATAGCCGCAGC-ATCTCTACGTAGAAGATCCCGTTTCTCTAGAGGTGGTCGTGGT-T 757
|||||||||||||| || ||| |||||||||||| ||||| ||| | ||||||||| |
Sbjct 706 ACAATAGCCGCAGCAAT-TCTTCGTAGAAGATCCAAATTCTCCAGACGCGGTCGTGGTGT 764
Query 758 TTG--GTGG---TGGTC---GT-A--GTAGGGGT--C-G--T-CATTTTTTAAAAAGGTC 800
| | |||| ||||| || | | |||||| | | | | | | |||||||| |
Sbjct 765 TGGCCGTGGTTTTGGTCTTGGTCATGGAAGGGGTCGCAGAATGCGTGGTCTAAAAAGGCC 824
Query 801 GGCAGCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGC 860
||||||||||||| || |||||||||||||| |||| ||| ||||||||||||||||
Sbjct 825 GGCAGCCACGAGGTCTCTGAGGGTAGCGAACGCAAAGAGAAAGGACCAAGAGGAGAAAGC 884
Query 861 CAGAGCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCG-AAGGCTGCATCTACAA 919
|| |||||||||| ||||||||||||||||||||||||||| | ||||| |||| ||| |
Sbjct 885 CAAAGCAAGCTTGGAGCGCAAGCAAAAGAAGGTTTCAATGG-GTAAGGCCGCATTTAC-A 942
Query 920 AG-TATTCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGAACTATTCGCA 978
|| ||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 943 AGATATACTAACGATCCAGACTATAGGTTTCTCCACGAACGTGTCTCTGATCTATTCGCA 1002
Query 979 AATCAACTAAAGAGAGACCTTGAGTTTTTGACATC-CGGCCAACC-AAACAAAATCTCTC 1036
||||| |||| |||||||||||||||||| | ||| | ||||||| |||| ||||||||
Sbjct 1003 AATCAGCTAAGGAGAGACCTTGAGTTTTTAAAATCAC-GCCAACCAAAAC-AAATCTCTT 1060
Query 1037 TAGCGGCTAAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTTATCTGCG 1096
||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||
Sbjct 1061 TAGCGGCTAAATGGTGTCCCTCGCTTGATTCTTCGTTCGACAAAGCAACTCTTCTTTGCG 1120
Query 1097 AGAGCATAGCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAG 1156
|||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1121 AGAGTATTGCTAGGAAGATCTTTCCCAAAGAATCATTCCCGGAATACGAAGGCGTGGAAG 1180
Query 1157 ATGCTCACTATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTGTTCCTCTCC 1216
| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| || |
Sbjct 1181 AAGCTCACTATGCGTACAGAGTTCGTGATCGGCTAAGGAAACAAGTTCTTGTTCCCCTTC 1240
Query 1217 GGAAG-ACTCTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCAATCTCTCCCT 1275
|| || || |||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1241 GG-AGAACCCTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCGATTTCTCCCT 1299
Query 1276 TATAACCGTGTTGCATCAGTGGCGATGAAGTCATACAAGGAGGTTTTCTTGTATCGTGAC 1335
|| || |||||| |||||||||| ||| ||| || |||||| |||||||||| ||||||
Sbjct 1300 TACAATCGTGTTCCATCAGTGGCAATGGCGTCCTATAAGGAGATTTTCTTGTACCGTGAC 1359
Query 1336 GAAAAGAGGTTTCAGCAATATCTTAACGATGCCAAGACGGGGAAAACGAAGATAGCCGCC 1395
| | |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1360 GCAGAGAGGTTTCAACAATATCTTAACGATGCGAAGACGGGGAAAACGAAGATAGCCGCC 1419
Query 1396 GGTGCTGTGTTACCTCACGAGATAATCAGAGAGTTAAACGGCGGAGACGGTGGCA-AAGT 1454
||||| ||| |||||||||||||||| | | | ||| |||| ||||||||||| | ||||
Sbjct 1420 GGTGCAGTGCTACCTCACGAGATAATAAAAAATTTAGACGGTGGAGACGGTGG-ACAAGT 1478
Query 1455 CGCTGAGCTGCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAAGGTTCTTTGACCAA 1514
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1479 TGCTGAGCTACAATGGAAACGAATGGTTGATGACCTTAAAGAGAAAGGTTCTTTGACCAA 1538
Query 1515 CTGCATGGCTATATGTGACGTTTCGGGATCTATGAATGGTGAGCCAATGGAGGTTTCAGT 1574
|||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 1539 CTGCATGGCTATCTGTGACGTTTCGGGGTCTATGAGTGGTGAGCCAATGGAGGTTTCAGT 1598
Query 1575 CGCCCTTGGATTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAAC 1634
||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1599 CGCGCTTGGTTTGTTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAAC 1658
Query 1635 ATTCAGACAAAG-TCCTGAACTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACAG 1693
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1659 ATTCAG-CAAAGACCCTGAACTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACA- 1716
Query 1694 AGTTT-GTGGAGAGCATGCAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTG 1752
||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1717 AGTTTCGTGAAGAGAATGCAATGGGATATGAACACTGATTTTCAGAAAGTGTTTGATTTG 1776
Query 1753 ATTCTTAAAGTGGCCGTGGAAAGC-AAGCTTAAGCCGCAAGACATGATCAAGAGGGTGTT 1811
||||||||||||||||| ||| || ||||| |||||| |||| |||||||||| | ||||
Sbjct 1777 ATTCTTAAAGTGGCCGTAGAA-GCCAAGCTGAAGCCGGAAGAGATGATCAAGACGTTGTT 1835
Query 1812 TGTGTTCAGTGACATGGAGTTTGATGAAGCGTCG 1845
|||||||||||| |||||||||||||||||||||
Sbjct 1836 TGTGTTCAGTGATATGGAGTTTGATGAAGCGTCG 1869
Score = 239 bits (129), Expect = 7e-62
Identities = 151/162 (93%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 79 GTCAATACTTCACCTCCGATGGGACAGACCGAGGAAAGACCCCACACGTACCTCGCCGCT 138
||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 139 GTCAACACTTCGCCTCCGACGGGACAGACCGAGGAAAGACCCCCCACGTACCTCGCCGCT 198
Query 139 CTCCTCAAGAACATCAACACTTGTCGTCCCAGCGTCCCAAAGGTCTCAAACATCAAGAAA 198
|||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 199 CTCCTCAAAAACATCAACACTTGTCGTCCCAGCGTCCCAAAGGTCTCAAACGTCAGGAAA 258
Query 199 TCAACTAAAGTCAACGTCAATCCTGTTAGACCTGTTAGACCG 240
|||||||||||||||||||| ||||| | |||||| ||||||
Sbjct 259 TCAACTAAAGTCAACGTCAAACCTGTCAAACCTGTAAGACCG 300
Score = 189 bits (102), Expect = 7e-47
Identities = 110/114 (96%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 1992 AGAGAAAGGGTACGGAGAGGCTGTGCCGGAGATTGTGTTTTGGAATCTGAGGGATTCGAG 2051
|||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||
Sbjct 1902 AGAGAAAGGGTACGGAGAAGCTGTGCCGGAGATTGTGTTTTGGAACCTGAGGGCTTCGAG 1961
Query 2052 GTCAACGCCTGTGCTTGGAAACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTC 2105
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1962 GTCAACGCCTGTGCTTGGAAACAAGAAAGGAGTGGCTTTGTTAAGTGGGTTTTC 2015
> Ahg319184 jgi|Araly1|319184|fgenesh1_pm.C_scaffold_3002200
Length=1932
Score = 1369 bits (741), Expect = 0.0
Identities = 969/1077 (90%), Gaps = 24/1077 (2%)
Strand=Plus/Plus
Query 792 AAA-AAGGTCGGCAGCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAG 850
||| |||| |||| |||| ||| |||| ||||||| | |||| ||||||||||||||||
Sbjct 560 AAATAAGGCCGGCCTCCACTAGGCAGCTGAGGGTAGAGTACGCAGAGAGGAAGAACCAAG 619
Query 851 AGGAGAAAGCCAGAGCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCGAA-GG-C 908
| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| || |
Sbjct 620 AAGAGAAAGCCAGAGCAAGCTTGGAGCGCAAGCAAAAGAAGGTTTCAATGG-GAATGGAC 678
Query 909 TGCATCTACAAAGTATTCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGA 968
|||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 679 -GCATTTACAAAATATTCTAACGATCCAGACTATAGGTTTCTCCACGAACGCGTCTCTGA 737
Query 969 ACTATTCGCAAATCAACTAAAGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAACAA 1028
||||| || |||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 738 CCTATTTGCCAATCAACTAAGGAGAGACCTTGAGTTTTTGACATCCGGCGAACCAAACAA 797
Query 1029 AATCTCTCTAGCGGCTAAATGGTGTCCATCCCTTGATTCTTCG-TTCGACAAAGCAACTC 1087
|||||| |||||||||||||||||||| || |||||||||| | || || ||||||||||
Sbjct 798 AATCTCCCTAGCGGCTAAATGGTGTCCCTCACTTGATTCTT-GCTTTGATAAAGCAACTC 856
Query 1088 TTATCTGCGAGAGCATAGCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAG 1147
|| ||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||
Sbjct 857 TTCTCTGCGAGAGCATTGCTAGGAAGATCTTTTCCCGTGAATCATTCCCCGAATACGAAG 916
Query 1148 GCGTGGAAGATGCTCACTATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTG 1207
|||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct 917 GCGTTGAAGATGCTCACTATGCGTACAGAGTTCGTGATCGACTAAGGAAACAGGTTCTTG 976
Query 1208 TTCCTCTCCGGAAGACTCTGCAACTCCCTGAAGTATACATGGGAGCTAGAGCTTGGCAAT 1267
||||||||||||||||||||||||||||||||||||| |||||||| |||| |||| |||
Sbjct 977 TTCCTCTCCGGAAGACTCTGCAACTCCCTGAAGTATATATGGGAGCGAGAGATTGGGAAT 1036
Query 1268 CTCTCCCTTATAACCGTGTTGCATCAGTGGCGATGAAGTCATACAAGGAG-GTTTTCTTG 1326
|||||||||| ||||||||||||||||||||||||||||| ||||||| | ||||||||
Sbjct 1037 CTCTCCCTTACAACCGTGTTGCATCAGTGGCGATGAAGTCGTACAAGG-GTTTTTTCTTG 1095
Query 1327 TATCGTGACGAAAAGAGGTTTCAGCAATATCTTAACGATGCCAA-GACGGGGAAAACGAA 1385
| | ||||| ||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct 1096 AAACATGACGCTGAGAGGTTTCAGCAATATCTTAACGATG-CAAGGATGGGGAAAACGAC 1154
Query 1386 GATAGCCGCCGGTGCTGTGTTACCTCACGAGATAATCA-GAGAGTTAAAC---GGCGGAG 1441
|||||| || |||||| ||||||||||||||||||| | |||| ||| || || ||||
Sbjct 1155 GATAGCTGCGGGTGCTCTGTTACCTCACGAGATAAT-ACGAGAATTAGACTGGGGAGGAG 1213
Query 1442 ACGGTGGCA-AAGTCGCTGAGCTGCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAA 1500
||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1214 ACGGTGG-ACAAGTCGCTGAGCTGCAATGGAAACGAATGGTTGATGACCTTAAAGAGAAA 1272
Query 1501 GGTTCTTTGACCAACTGCATGGCTATATGTGACGTTTCGGGATCTATGAAT-GGTGAGCC 1559
|||||||| || |||||||||||||| | ||||||||||||||||||| || ||||||||
Sbjct 1273 GGTTCTTTAACGAACTGCATGGCTATCTCTGACGTTTCGGGATCTATG-ATGGGTGAGCC 1331
Query 1560 AATGGAGGTTTCAGTCGCCCTTGGATTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAA 1619
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1332 AATGGAGGTTTCAGTCGCCCTTGGTTTGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAG 1391
Query 1620 AGGAAAGCTTATAACATTCAGAC-AAAGTCCTGAACTGCATTTGGTGAAAGGAGACGATT 1678
||||||||||||||||||||| | ||| ||||||||||||||||||| |||||||||||
Sbjct 1392 AGGAAAGCTTATAACATTCAG-CGAAAACCCTGAACTGCATTTGGTGACAGGAGACGATT 1450
Query 1679 TGAGATCAAAAACAGAGTTTGTGGA-GAGCATGCAATGGGATATGAACACTGATTTTCAG 1737
|||| ||||||||||||||||| || || ||| ||||||||||||||||||||||||||
Sbjct 1451 TGAGGTCAAAAACAGAGTTTGT-GAGGAATATGGAATGGGATATGAACACTGATTTTCAG 1509
Query 1738 AAAGTGTTTGATTTGATTCTTAAAGTGGCCGTGGAAAGCAAGCTTAAGCCGCAAGACATG 1797
|||||||||||||||||||| | ||| ||||| ||| | ||||||| ||||||||| |||
Sbjct 1510 AAAGTGTTTGATTTGATTCTGAGAGTCGCCGTAGAAGGGAAGCTTAGGCCGCAAGATATG 1569
Query 1798 ATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTTGATGAAGCGTCGACTTCGACT 1854
||||||||||||||||||||||||||||||||||||||| |||| || || |||||
Sbjct 1570 ATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTTGATCAAGCACCGCCTCCGACT 1626
Score = 490 bits (265), Expect = 2e-137
Identities = 339/375 (90%), Gaps = 4/375 (1%)
Strand=Plus/Plus
Query 312 CAAATCTTCACCTGCGATGGGCTACACTGAGAATAGATCCGCCACCTACCTCTCCTCAGG 371
||| |||||||| | ||||||||||| |||||| |||||||||| ||||||||| ||||
Sbjct 48 CAACTCTTCACCCCCCATGGGCTACACCGAGAATGGATCCGCCACGTACCTCTCCGCAGG 107
Query 372 TAACCCCTGCCTCGACTTCTTCTTTCACATTGTTCCTTCCACGCCCAAGAAATCTCTGGA 431
||||||||||||||||||||||| ||| ||||||| |||||||||||| ||||||| ||
Sbjct 108 CAACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCCTCCACGCCCAAGGAATCTCTTGA 167
Query 432 GCAGCGGCTAGAGGAGGCTTGGGACCATGATTCTTTAACCACTCTCAAGCTTATCTGTAA 491
| |||||||| | |||||||||| ||| || | |||||||| |||||||||||||||||
Sbjct 168 GAAGCGGCTACAAGAGGCTTGGGGCCACGACGCCTTAACCACCCTCAAGCTTATCTGTAA 227
Query 492 CCTTCGTGGAGTCCGTGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTT 551
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 228 CCTTCGTGGAGTCCGTGGCACCGGAAAATCTGACAAGGAAGGGTTTTACACCGCGGCGTT 287
Query 552 GTGGCTCCATGGTCGCCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTC-TCTCCAA-A 609
|||||||||||||| ||||||||||||||||||||||||||||||||| | |||| || |
Sbjct 288 GTGGCTCCATGGTCACCATCCCAAAACCCTAGCTTGTAACCTCGAGTC-CATCTC-AACA 345
Query 610 TTTGGCTATTTTAAAGATTTTCCGGAGATTCTTTACCGGATTCTACAAGGACCTGAAATC 669
||||| || |||||||||||||| ||| ||||||||||||||||||||||| ||||||||
Sbjct 346 TTTGGTTACTTTAAAGATTTTCCAGAGGTTCTTTACCGGATTCTACAAGGATCTGAAATC 405
Query 670 CGCAGTATACAGAAA 684
|||||||| ||||||
Sbjct 406 CGCAGTATCCAGAAA 420
Score = 239 bits (129), Expect = 7e-62
Identities = 139/144 (97%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 1963 GATTACAAGGTGATTGTGAGAAAGTATAGAGAGAAAGGGTACGGAGAGGCTGTGCCGGAG 2022
||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1648 GATTATGAGGTGATTGTTAGAAAGTATAGAGAGAAAGGGTACGGAGAAGCTGTGCCGGAG 1707
Query 2023 ATTGTGTTTTGGAATCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 2082
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1708 ATAGTGTTTTGGAATCTGAGGGATTCGAGGTCAACGCCTGTGCTTGGAAACAAGAAAGGA 1767
Query 2083 GTGGCTTTGGTAAGTGGGTTTTCC 2106
||||||||||||||||||||||||
Sbjct 1768 GTGGCTTTGGTAAGTGGGTTTTCC 1791
> Ahg488135 jgi|Araly1|488135|fgenesh2_kg.6__1269__AT5G13210.1
Length=2115
Score = 1162 bits (629), Expect = 0.0
Identities = 913/1050 (87%), Gaps = 20/1050 (2%)
Strand=Plus/Plus
Query 805 GCCACGAGGGAGCTAAGGGTAGCGAACGCGGAGAGGAAGAACCAAGAGGAGAAAGCCAGA 864
||||| |||||||| || ||||| ||||| |||||||||||||||| |||||||||||||
Sbjct 697 GCCACAAGGGAGCTGAGAGTAGCCAACGCAGAGAGGAAGAACCAAGCGGAGAAAGCCAGA 756
Query 865 GCAAGCTTGAAGCGCAAGCAAAAGAAGGTTTCAATGGCGAAGG-CTGCATCTACAAAG-T 922
||||||||| | |||||| |||||||||||||||||| ||||| | || | ||| ||| |
Sbjct 757 GCAAGCTTGGATCGCAAGAAAAAGAAGGTTTCAATGGGGAAGGAC-GCGTTTAC-AAGAT 814
Query 923 ATTCTAACGATCCAAACTATAGGTTTCTCCACGAACGTGTCTCTGAACTATTCGCAAATC 982
||||| | |||||| ||||| ||| |||||||||||| |||||||| |||||||||||||
Sbjct 815 ATTCTCATGATCCAGACTATCGGTATCTCCACGAACGCGTCTCTGATCTATTCGCAAATC 874
Query 983 AACTAAAGAGAGACCTTGAGTTTTTGACATCCGGCCAACCAAACAAAATCTCTCTAGCGG 1042
|||||||||||| ||||||||||||||||||| |||| ||||| |||||||||| || |
Sbjct 875 GACTAAAGAGAGATCTTGAGTTTTTGACATCCGACCAAACAAACCAAATCTCTCTTGCTG 934
Query 1043 CTAAATGGTGTCCATCCCTTGATTCTTCGTTCGACAAAGCAACTCTTATCTGCGAGAGCA 1102
|||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||
Sbjct 935 CTAAATGGTGTCCATCGCTTGATTCTTCGTTTGACAAAACAACTCTTCTCTGCGAGAGCA 994
Query 1103 TAGCTAGGAAGATCTTTCCCCAAGAATCATTCCCGGAATACGAAGGCGTGGAAGATGCTC 1162
| ||||||||||||||||| | |||||||||||| |||||||||||||| || || ||||
Sbjct 995 TTGCTAGGAAGATCTTTCCTCGAGAATCATTCCCTGAATACGAAGGCGTTGACGAAGCTC 1054
Query 1163 ACTATGCGTACAGAGTTCGTGACCGGCTAAGGAAACAAGTCCTTGTTCCTCTCCGGAAGA 1222
||||||| |||||||||||||| || ||||||||| |||| ||||||||||| ||||| |
Sbjct 1055 ACTATGCCTACAGAGTTCGTGATCGTCTAAGGAAAGAAGTTCTTGTTCCTCTGCGGAAAA 1114
Query 1223 CTCTGCAACTCCCTGAAGTATACATGGGAGCTAG-AGCTTGGCAAT-CTCTCCCTTATAA 1280
||||||||||||||||||||||||||||||| || | | ||| || |||| || || ||
Sbjct 1115 CTCTGCAACTCCCTGAAGTATACATGGGAGCGAGAAAC-TGG-GATACTCTTCCGTACAA 1172
Query 1281 CCGTGTTGCATCAGTGGCGATGAAGTCATACAAGGAGGTTTTCTTGTATCGTGACGAAAA 1340
|||||| ||||||||||| |||||| | |||||||| | |||||| ||| |||| | |
Sbjct 1173 CCGTGTAGCATCAGTGGCAATGAAGACGTACAAGGATATATTCTTGAATCACGACGCAGA 1232
Query 1341 GAGGTTTCAGCAATATCTTAACGATGCCAAGACGGGGAAAACGAAGATAGCCGCCGGTGC 1400
||||||||| ||||| ||| ||||||| |||||||| ||||| ||| |||| ||||||||
Sbjct 1233 GAGGTTTCAACAATACCTTGACGATGCAAAGACGGGTAAAACCAAGGTAGCTGCCGGTGC 1292
Query 1401 TGTGTTACCTCACGAGATAATCAGAGAGTTAAACGGCGGAGACGGTGG-CAAAGTCGCTG 1459
||||||||||||||||||||||||||| ||| |||| ||||||||||| ||| || ||||
Sbjct 1293 TGTGTTACCTCACGAGATAATCAGAGATTTAGACGGTGGAGACGGTGGACAA-GTAGCTG 1351
Query 1460 AGCTGCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAAGGTTCTTTGACCAACTGCA 1519
|||||||||||||||||| ||| || || || ||||||||||||||||||| || || |
Sbjct 1352 AGCTGCAATGGAAACGAACGGTGGATGATCTGAAAGAGAAAGGTTCTTTGAGGAATTGTA 1411
Query 1520 TGGCTATATGTGACGTTTC-GGGATCTATGAATGGTGAGCCAATGGAGGTTTCAGTCGCC 1578
| ||||| ||||||||||| ||| |||||| ||||||| ||||||||||||||||||||
Sbjct 1412 TAGCTATCTGTGACGTTTCAGGG-TCTATGGATGGTGATCCAATGGAGGTTTCAGTCGCT 1470
Query 1579 CTTGGAT-TGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAAAGCTTATAACATT 1637
|||| | |||||||||| ||| |||| ||||||||||||| ||||||||||||||| ||
Sbjct 1471 -TTGGGTCTGCTAGTCTCAGAGTTATCTGAAGAGCCATGGAGAGGAAAGCTTATAACTTT 1529
Query 1638 CAGACAAAGTCCTGA-ACTGCATTTGGTGAAAGGAGACGATTTGAGATCAAAAACAGAGT 1696
||| |||| || || | |||||||||||| ||||||||| |||||||||||| ||||||
Sbjct 1530 CAGCCAAAACCCGGAGA-TGCATTTGGTGACAGGAGACGACTTGAGATCAAAATCAGAGT 1588
Query 1697 TTGTGGAG-AGCATGCAATGGG-ATATGAACACTGATTTTCAGAAAGTGTTTGATTTGAT 1754
||||| || | |||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 1589 TTGTG-AGGAATATGCAATGGGGA-ATGAACACTGATTTTCAGAAAGTGTTTGACTTGAT 1646
Query 1755 TCTTAAAGTGGCCGTGGAAAGCAAGCTTAAGCCGCAAGACATGATCAAGAGGGTGTTTGT 1814
||| | ||| || || ||| | ||||| || ||| |||| ||||||||||||||||||||
Sbjct 1647 TCTGAGAGTTGCGGTAGAAGGGAAGCTGAAACCGGAAGAGATGATCAAGAGGGTGTTTGT 1706
Query 1815 GTTCAGTGACATGGAGTTTGATGAAGCGTC 1844
||||||||| |||||||||||| |||||||
Sbjct 1707 GTTCAGTGATATGGAGTTTGATCAAGCGTC 1736
Score = 407 bits (220), Expect = 2e-112
Identities = 333/386 (86%), Gaps = 14/386 (4%)
Strand=Plus/Plus
Query 316 TCTTCACCTGCGATGGGCTACACTGAGAATAGA-TCCGCCAC-CTACCTCTCCTCAGGTA 373
||||| ||| | ||||||||||| ||||| | | |||||||| | ||||||||||||| |
Sbjct 181 TCTTCTCCTCCCATGGGCTACACCGAGAACA-ATTCCGCCACGC-ACCTCTCCTCAGGCA 238
Query 374 ACCCCTGCCTCGACTTCTTCTTTCACATTGTTCCTTCCACGCC-CAAGAAATCTCTGGAG 432
|||||||||||||||||||||| ||| ||||||| |||||| ||| | |||||||||
Sbjct 239 ACCCCTGCCTCGACTTCTTCTTCCACGTTGTTCCAAGCACGCCTAAAG-ACTCTCTGGAG 297
Query 433 CAGCGGCTAGA-GGAGGCTTGGGACCATGATTCTTTAACCACTCTCAAGCTTATCTGTAA 491
||| ||||| | ||| ||||||||||| || | || |||||||||||||||||||||||
Sbjct 298 CAGTGGCTACAGGGA-GCTTGGGACCACGACGCCTTGACCACTCTCAAGCTTATCTGTAA 356
Query 492 CCTTCGTGGAGTCCGTGGCACTGGAAAATCTGACAAGGAAGGGTTTTACACGGCGGCGTT 551
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||
Sbjct 357 CCTTCGTGGAGTCCGTGGCACCGGAAAATCCGACAAGGAAGGGTTTTACACGGCGGCTTT 416
Query 552 GTGGCTCCATGGTCGCCATCCCAAAACCCTAGCTTGTAACCTCGAGTCTCTCTC-CAAAT 610
|||||||||||| | ||||||||||| |||||||||||||||||||| ||||| ||| |
Sbjct 417 ATGGCTCCATGGTTGTCATCCCAAAACTCTAGCTTGTAACCTCGAGTCCCTCTCTCAA-T 475
Query 611 TTGGCTATTTTAAAGATTTTCCGGAGATTCTTTACCGGATTCTACAAGGACCTGAAATCC 670
|||| || ||||||||||| || |||||||||||||||||||| |||||| |||| |||
Sbjct 476 TTGGATACTTTAAAGATTTCCCAGAGATTCTTTACCGGATTCTTCAAGGATCTGACATCA 535
Query 671 GCA-GTATACAGAAAAC-GCAAAGGT 694
| | | || |||||| | | ||||||
Sbjct 536 GGAAG-ATCCAGAAATCAG-AAAGGT 559
Score = 165 bits (89), Expect = 1e-39
Identities = 134/155 (86%), Gaps = 6/155 (4%)
Strand=Plus/Plus
Query 1954 TGGCAAACGGATTACAAGGTGATTGTGAGAAAGTATAGAG-AGAAAGGGTACGGAGAGGC 2012
||| |||| ||||| ||||||||||||| |||||||| | |||| ||||| ||||| |
Sbjct 1777 TGGGAAACTGATTATGAGGTGATTGTGAGGAAGTATAG-GCAGAATGGGTATGGAGAAGT 1835
Query 2013 TGTGCCGGAGATTGTGTTTTGGAATC-TGAGGGATTCGAG-GTCAACGCCTGTGCTTGGA 2070
||||||||| || ||||||||||| | |||||||||| || | ||||||| |||| |||
Sbjct 1836 TGTGCCGGATATAGTGTTTTGGAA-CTTGAGGGATTCAAGAG-CAACGCCGGTGCCGGGA 1893
Query 2071 AACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTC 2105
|||||||||||||||||||||||||||||||||||
Sbjct 1894 AACAAGAAAGGAGTGGCTTTGGTAAGTGGGTTTTC 1928
> Ahg899811 jgi|Araly1|899811|Al_scaffold_0004_461
Length=813
Score = 363 bits (196), Expect = 4e-99
Identities = 318/376 (85%), Gaps = 12/376 (3%)
Strand=Plus/Plus
Query 1388 TAGCCGCCGGTGCTGTGTTACCTCACGAGATAATCAGAGAGTTAAACGGCGGAGACGGTG 1447
|||| || ||||||||||||||||||||||||||||||| ||| | || ||||| ||||
Sbjct 371 TAGCTGCTGGTGCTGTGTTACCTCACGAGATAATCAGAGTTTTAGATGGTGGAGAAGGTG 430
Query 1448 G-CAAAGTCGCTGAGCTGCAATGGAAACGAATGGTTGACGACCTTAAAGAGAAAGGTTCT 1506
| ||| || ||||||||||| ||||||| |||||| || || || |||||||||||||||
Sbjct 431 GACAA-GTAGCTGAGCTGCAGTGGAAACAAATGGTGGATGATCTGAAAGAGAAAGGTTCT 489
Query 1507 TTGACCAACTGCATGGCTATATGTGACGTTTC-GGGATCTATGAATGGTGAGCCAATGGA 1565
|||| || | || ||||| ||||||||||| ||| |||||||||||||| |||||||
Sbjct 490 TTGAGGAATTATATCGCTATCTGTGACGTTTCAGGG-TCTATGAATGGTGATTCAATGGA 548
Query 1566 GGTTTCAGTCGCCCTTGGAT-TGCTAGTCTCTGAGCTATCAGAAGAGCCATGGAAAGGAA 1624
|||||||||||| |||| | |||||||||| ||| |||| ||||||||||||| |||||
Sbjct 549 GGTTTCAGTCGCT-TTGGGTCTGCTAGTCTCAGAGTTATCTGAAGAGCCATGGAGAGGAA 607
Query 1625 AGCTTATAACATTCAGACAAAGTCCTGA-ACTGCATTTGGTGAAAGGAGACGATTTGAGA 1683
|||||||||| ||||| |||| || || | ||| ||||||| |||||| || ||||||
Sbjct 608 AGCTTATAACTTTCAGTCAAAACCCGGAGA-TGCGCTTGGTGACAGGAGATGACTTGAGA 666
Query 1684 TCAAAAACAGAGTTTGTGGAG-AGCATGCAATGGG-ATATGAACACTGATTTTCAGAAAG 1741
|| ||| ||||||||||| || | |||||||||| | |||||||||| |||||||||||
Sbjct 667 TCGAAATCAGAGTTTGTG-AGGAATATGCAATGGGGA-ATGAACACTGTTTTTCAGAAAG 724
Query 1742 TGTTTGATTTGATTCT 1757
||||||| ||||||||
Sbjct 725 TGTTTGACTTGATTCT 740
> Ahg948830 jgi|Araly1|948830|scaffold_800717.1
Length=2014
Score = 100 bits (54), Expect = 4e-20
Identities = 221/297 (74%), Gaps = 30/297 (10%)
Strand=Plus/Plus
Query 1557 GCCAATGGAGGTTTCAGTCGCCCTTGGATTGCTAGTCTCTGAGCTATCA-GAAGAGCCAT 1615
||| |||||||||| || || || || || | || || || || | | |||||||| |
Sbjct 1364 GCCTATGGAGGTTTGTGTAGCGCTCGGGTTATTGGTTTCGGAACT-TAATGAAGAGCCGT 1422
Query 1616 GGAAA-GGAAAGCTTATAACATTCAGAC-AAAGTCCTG-AACTGCA-TTTGGTGAAAGGA 1671
||||| |||||| |||| || || || | ||| || | | |||| || || | ||
Sbjct 1423 GGAAAGGGAAAG-TTATCACCTTTAG-CGAAA-ACCCGCAGTTGCACATT-GTCACGGGT 1478
Query 1672 GACGA-TTTGAGATCAAAA-ACAGAGTTTGTGGAGAG-CATGCAAT-GGGATATGAACAC 1727
| ||| | ||||| |||| || |||||||| || | ||| | | |||| ||||||||
Sbjct 1479 G-CGAGTCTGAGA-GAAAAGACTGAGTTTGT-CAGGGAAATGGATTGGGGA-ATGAACAC 1534
Query 1728 TGATTTTCAGAAAGTGTTTGATTTG-ATTCTTA-AAGTGGCCGTGGA-AAGCAAGCTTAA 1784
||||||||||| || ||||| | | |||| || |||| || || || || || |||||
Sbjct 1535 GGATTTTCAGAAGGTATTTGA-TCGTATTC-TAGAAGTTGCAGTCGAGAA-TAA-CTTAA 1590
Query 1785 GCCGCA--AG-ACATGATCAAGAGGGTGTTTGTGTTCAGTGACATGGAGTTTGATGA 1838
||| | || | ||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1591 -CCG-ATGAGCAGATGATCAAGCGGTTGTTTGTGTTCAGTGACATGGAGTTTGATGA 1645
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80827499890
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5