BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G25460.1 Length=1086 Score E Sequences producing significant alignments: (Bits) Value Ahg930679 jgi|Araly1|930679|scaffold_303136.1 1109 0.0 Ahg930677 jgi|Araly1|930677|scaffold_303134.1 1027 0.0 Ahg930681 jgi|Araly1|930681|scaffold_303138.1 1022 0.0 Ahg342715 jgi|Araly1|342715|fgenesh1_pg.C_scaffold_3002478 383 2e-105 Ahg472870 jgi|Araly1|472870|fgenesh2_kg.1__2824__AT1G25141.1 163 2e-39 Ahg318995 jgi|Araly1|318995|fgenesh1_pm.C_scaffold_3002011 102 5e-21 Ahg930217 jgi|Araly1|930217|scaffold_302674.1 95.3 8e-19 Ahg904936 jgi|Araly1|904936|Al_scaffold_0003_2064 63.9 2e-09 Ahg934692 jgi|Araly1|934692|scaffold_402680.1 52.8 5e-06 > Ahg930679 jgi|Araly1|930679|scaffold_303136.1 Length=1135 Score = 1109 bits (600), Expect = 0.0 Identities = 949/1112 (85%), Gaps = 46/1112 (4%) Strand=Plus/Plus Query 1 ATGATGATGCCAGAACTTCCAGAGGATTTGTTAGTGGAGATACTCTGCCGCGTTCCGGCT 60 ||||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 23 ATGATGATGCCGGAACTTCCAGAAGATTTGTTAGAGGAGATACTCTGCCGCGTTCCGGCT 82 Query 61 ACATCTTTGAAACGA-TTACGATCTACTTGCAAACTATGGAACCATTTATACAACGATAA 119 ||||||||||||| | ||||||| |||||||||||||||||||| ||||| ||||||||| Sbjct 83 ACATCTTTGAAAC-AGTTACGATGTACTTGCAAACTATGGAACCGTTTATTCAACGATAA 141 Query 120 GAGATTCAAAAGCAAACACTGCCATAAAGCCCCAAGGCAATCTCTGATTCTCATGTGGAA 179 ||||||| ||| ||||||| || |||||||||||||||||||||||||||||||| ||| Sbjct 142 GAGATTCGCAAGAAAACACTTCCGTAAAGCCCCAAGGCAATCTCTGATTCTCATGTTGAA 201 Query 180 GAATTTTGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTATAGAGGTCAC 239 |||||| || ||||||||||| ||| |||||||||| |||||||||| |||||| ||| Sbjct 202 GAATTTAGGGTTTTCTTCGATGAGCTTCAATCTCCACCGAGTTTCACCAATAGAGATCAT 261 Query 240 TGGTGAACTTAACCTAATCGACCATCATTCTAGTTTAGGTATGTTCAGGAACTCTCCATT 299 ||||||||||||||||||||||| ||||||||||| | | | |||| || || || | Sbjct 262 TGGTGAACTTAACCTAATCGACCCTCATTCTAGTTCATATCTATTCAAGATCTATCAAAG 321 Query 300 ATGTCAAACTTC---TGGCTTATTGTTATGCGT---CAACGTGGAGAAAATTAATACTAG 353 | ||| | ||| || |||||||||||||| |||| ||||| | | |||||| Sbjct 322 CTATCACAGTTCAGACGGTTTATTGTTATGCGTCAACAACATGGAG-GGA--AGTACTAG 378 Query 354 GCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATTCAACACAGAAGGATGGG 413 |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| || Sbjct 379 GCTCGTGGTATGGAACCCGTGTACTGGTCAAACCAAGTGGATCCAACACAGAAAGATAGG 438 Query 414 CTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAATCC-GACAATAATAGCT 472 |||| |||||| |||| |||||||||||||||||||||| |||||| || |||||||||| Sbjct 439 CTACTTCTGCACCTATTCTCTTGGATCCTACCAAGACAACAAATCCGGA-AATAATAGCT 497 Query 473 ACAAAATATTGAGCCACGGGATTTATGGTGGCCAAGAGTTCGAAATTTATGAGATTAACT 532 ||||||||||||||| ||||| ||||| || ||| |||||||||||||||||||||| Sbjct 498 ACAAAATATTGAGCCGTAGGATTAATGGTTACCCAGAATTCGAAATTTATGAGATTAACT 557 Query 533 CAAATTCATGGAGG-ATTCTTGATGTCACTGTGGACTCCTC-TTT--GTACATTGAAAAC 588 |||||||||||||| || ||||||||||||||||||| | | ||| |||| || ||||| Sbjct 558 CAAATTCATGGAGGCAT-CTTGATGTCACTGTGGACTGCACCTTTATGTACCTTCAAAAC 616 Query 589 GTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAATGATAAACCG-T-GCG 646 || ||||||||||| ||||||||||||||||||| ||||| ||| || |||| | | | | Sbjct 617 GTGTCTTTGAAGGGAAAGACTTACTGGTTTGCTAGAGATGAAAAAGAGAAACAGCTTG-G 675 Query 647 ACCTATTCTT---GATCTGTTTTGATTATACGACAGAAAGATTTGAACGTCTATGTCTTC 703 | || |||| |||| ||||||||||||| ||||||||||||||||||||| ||||| Sbjct 676 -CTTAATCTTAATGATCAGTTTTGATTATACAACAGAAAGATTTGAACGTCTACATCTTC 734 Query 704 CGTATCAG-ATTCC-GTATTTTCGTAATACATC--TCTATCAGTTGTTAAAGAAGAGAAA 759 ||||| || || || | ||||||| || |||| | | || ||||||| ||| |||||| Sbjct 735 CGTATAAGTAT-CCTG-ATTTTCG-AA-ACATTGATTTTTCTGTTGTTAGAGACGAGAAA 790 Query 760 CTTTCCGTGTTATTACAAC-CTTCCCTTACATCGAAGACACAGATATGGGTGACAAATAA 818 ||||||||||||||||||| | || ||||| |||||||| | ||||||||||||||||| Sbjct 791 CTTTCCGTGTTATTACAACGCAACC-TTACACCGAAGACAGAAATATGGGTGACAAATAA 849 Query 819 GATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGTGGATTTGAAGCCTGA 878 |||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 850 GATTGGTGAGACCAAAGTGTTGTCTTGGATCAAGGGCTTAACGGTGGATTTGAAGCCTGA 909 Query 879 GATTAAATATGGCATAAAATTCTTGGTCGATGAGGAGAACAAAGTCCTTGTGTATGAG-C 937 | ||| | ||||||||||||||||||||||||||||||| |||||||| |||| | | | Sbjct 910 GCTTAGAGATGGCATAAAATTCTTGGTCGATGAGGAGAAGAAAGTCCTCGTGTGT-ACTC 968 Query 938 AAAATTTTGTA-ATAAACGGCAAAAACAACATGATATACGTCGTTGGAGAGGACAACGAA 996 ||||| || | ||||| |||||| | | || ||||| ||||||||||||||||| || Sbjct 969 AAAATAATGGATATAAAAGGCAAA--CTA--TGGTATACATCGTTGGAGAGGACAACAAA 1024 Query 997 GTTAGGGAAGTGG-TGTTTAGAGTCGGATTAAAACCATTATTCTTTTA-TTATGTTCCAA 1054 ||||||||||||| | ||| ||| || ||| |||||||| || || | ||||||||||| Sbjct 1025 GTTAGGGAAGTGGCT-TTTGGAGACGAATTCAAACCATT-TTGGTTGAATTATGTTCCAA 1082 Query 1055 GTTTGACTCAAATCCGGCAAGGTAATGATTAA 1086 ||||||||||||||| ||||||| |||||||| Sbjct 1083 GTTTGACTCAAATCCAGCAAGGTGATGATTAA 1114 > Ahg930677 jgi|Araly1|930677|scaffold_303134.1 Length=1195 Score = 1027 bits (556), Expect = 0.0 Identities = 937/1114 (84%), Gaps = 53/1114 (5%) Strand=Plus/Plus Query 1 ATGATGATGCCAGAACTTCCAGAGGATTTGTTAGTGGAGATACTCTGCCGCGTTCCGGCT 60 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 23 ATGATGATGCCAGAACTTCCAAAGGATTTGTTAGAGGAGATACTCTGCCGCGTTCCGGCA 82 Query 61 ACATCTTTGAAACGATTACGATCTACTTGCAAACTATGGAACCATTTATACAACGATAAG 120 |||||| ||||||||||||||||||||||||||| |||||||| |||| | ||||||||| Sbjct 83 ACATCTCTGAAACGATTACGATCTACTTGCAAACGATGGAACCTTTTAAAAAACGATAAG 142 Query 121 AGATTCAAAAGCAAACACTGCCATAAAGCCCCAAGGCAATCTCTGATTCTCATGTGGAA- 179 ||||||| ||| ||||||| ||| ||||||||||| ||||||||||||||||||||||| Sbjct 143 AGATTCACAAGAAAACACTTCCACAAAGCCCCAAGACAATCTCTGATTCTCATGTGGAAT 202 Query 180 GAATTTTGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTATAGAGGTCAC 239 | | ||||| ||||||||||| | ||||||||| || ||||||||||||||||||||||| Sbjct 203 G-AGTTTGGGTTTTCTTCGATGAACATCAATCTACACAGAGTTTCACCTATAGAGGTCAC 261 Query 240 TGGTGAACTTAACCTAATCGACCATCATTCTAGTTTAGGT-ATGTTCAGGAACTCTCCAT 298 ||||||||||||||||||||||| ||||| |||||||| | | |||||||||||||| | Sbjct 262 TGGTGAACTTAACCTAATCGACCCTCATTATAGTTTAGATCA-GTTCAGGAACTCTCTAC 320 Query 299 TATGTCAAACTTCTGGCTTATTGTTATGCGTCAA-CGT--G-GAGAA-AAT----T--AA 347 | || || ||||||||||||||||||| || | ||| | || || || | || Sbjct 321 TCTGCCACACTTCTGGCTTATTGTTATT-GTTATGCGTCTGTGACAACAACGAAGTGGAA 379 Query 348 --TACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATTCAACACAGA 405 |||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||| Sbjct 380 GGTACTAGGCTCGTGGTATGGAACCCGTGTACCGGTCTAACCAAGTGGATCCAACACAGA 439 Query 406 AGGATGGGCTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAATCCGACAAT 465 | | | |||||||||| | |||||||||||| || ||||||||||| ||||| | |||| Sbjct 440 AAGCTTTGCTACATCTGTACCTATGCTCTTGGTTCTTACCAAGACAACAAATCTGGCAAT 499 Query 466 AATAGCTACAAAATATTGAGCCACGGGATTTATGGTGGCCAAGA----G--TTCGAAATT 519 || ||||||||||||||||||| | || |||||||| |||||| | ||||||||| Sbjct 500 AAGAGCTACAAAATATTGAGCCGCAGGTTTTATGGTCACCAAGACCCAGAATTCGAAATT 559 Query 520 TATGAGATTAACTCAAATTCATGGAGGAT--TC-TTGATGTCACTGTGGACTCCTCT--T 574 |||||||||||||| ||||||||||||| || ||||||||| |||||||| | | | Sbjct 560 TATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTGCACCGAT 619 Query 575 -TGTACATT-GAAAACGTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAA 632 |||||||| | || ||| |||||||| || ||||||||||||||||||||| ||| ||| Sbjct 620 ATGTACATTCGGAA-CGTGTCTTTGAAAGGAAAGACTTACTGGTTTGCTACAAATGAAAA 678 Query 633 TGATAAAC--CGTGCGACCTATTCTTGATCTGTTTTGATTATACGACAGAAAGATTTGAA 690 || |||| | | || ||||||||| ||| ||||||||||||| ||||||||||||||| Sbjct 679 AGAGAAACAAC-T-CGGCCTATTCTTAATCAGTTTTGATTATACAACAGAAAGATTTGAA 736 Query 691 CGTCTATGTCTTCCGTATCAG-ATTCCGTATTTTCGTAAT-A---C-A-TCTCTATCAGT 743 ||||||||||| || |||| | || || ||| | || || | | | |||||||| || Sbjct 737 CGTCTATGTCTACCTTATCCGCAT-CCATATCATGGTTATCAAAACGAGTCTCTATCTGT 795 Query 744 TGTTAAAGAAGAGAAACTTTCCGTGTTATTACAACCTTCCCTTACATCGAAGACACAGAT 803 ||||| ||||||||||||||| ||||||||||||| | | |||| ||||||||| |||| Sbjct 796 TGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGTCGAAGACAGAGAT 855 Query 804 ATGGGTGACAAATAAGATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGT 863 ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| |||| Sbjct 856 ATGGGTGACAAATAAGATTGGTGAGACCAAAGTGTTGTCGTGGATCAAGGTCTTAGCGGT 915 Query 864 GGATTTGAAGCCTGAGATTAAATATGGCATAAAATTCTTGGTCGATGAGGAGAACAAAGT 923 |||||||| ||||||| |||| || ||||||||||||||||||||||||||| ||||| Sbjct 916 GGATTTGACGCCTGAGCCCAAATTTGACATAAAATTCTTGGTCGATGAGGAGAAGAAAGT 975 Query 924 CCTTGTGTATGAG-CAAAATTTTGTA-ATAAACGGCAAAAACAACATGATATACGTCGTT 981 ||| |||||| | |||||| || | | ||| | |||| | || ||||| ||||| Sbjct 976 CCTCGTGTAT-ACTCAAAATAATGGATACAAAAGCCAAAGT-AT--TG-TATACATCGTT 1030 Query 982 GGAGAGGACAACGAAGTTAGGGAAGTGG-TGTTTAGAGTCGGATTAAAACCATTATTCTT 1040 ||| |||||||| ||||||||||||||| | ||| ||| || ||| |||||||| || || Sbjct 1031 GGAAAGGACAACAAAGTTAGGGAAGTGGAT-TTTGGAGACGAATTCAAACCATTTTTGTT 1089 Query 1041 TTATTATGTTCCAAGTTTGACTCAAATCCGGCAA 1074 |||| |||||||| ||||||||||||| |||| Sbjct 1090 GAATTACGTTCCAAGCTTGACTCAAATCCAGCAA 1123 > Ahg930681 jgi|Araly1|930681|scaffold_303138.1 Length=1098 Score = 1022 bits (553), Expect = 0.0 Identities = 902/1062 (85%), Gaps = 58/1062 (5%) Strand=Plus/Plus Query 66 TTTGAAACGATTACGATCTACTTGCAAACTATGGAACCATTTATACAACGATAAGAGATT 125 ||||||||| ||||||| |||||||||||||||| || |||||| ||| ||||||||||| Sbjct 34 TTTGAAACGGTTACGATGTACTTGCAAACTATGGCACAATTTATTCAAGGATAAGAGATT 93 Query 126 CAAAAGCAAACACTGCCATAAAGCCCCAAGGCAATCTCTGATTCTCATGTGGAAGAATTT 185 | ||| ||||||| || ||||||| |||||||||||||||||||||||| ||||||||| Sbjct 94 CGCAAGAAAACACTCCCGTAAAGCCTCAAGGCAATCTCTGATTCTCATGTTGAAGAATTT 153 Query 186 TGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTATAGAGGTCACTGGTGA 245 ||| || |||||||| ||||||||||| || ||||||||||||||||||||||||||||| Sbjct 154 TGGGTTATCTTCGATGAGCATCAATCTACACAGAGTTTCACCTATAGAGGTCACTGGTGA 213 Query 246 ACTTAACCTAATCGAC-CATCATTCTAGTTTAG---GTAT-G-T---T-CAGGAACTCTC 295 |||||||||||||||| | |||||||||||||| | | | | | |||||||| | Sbjct 214 ACTTAACCTAATCGACTC-TCATTCTAGTTTAGAATCTTTAGATCACTACAGGAACTAT- 271 Query 296 CATTA-TGTCAAACTTC---TGGCTTATTGTTATGCGTCAAC-GTGG-A--GAA------ 341 || | ||||| | ||| |||||||||||||| |||||| ||| | ||| Sbjct 272 CAAAACTGTCACAGTTCAGACGGCTTATTGTTATGTGTCAACAATGGTATGGAATCCTCC 331 Query 342 A---A--TTAATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATT 396 | | |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 332 ATGGAGGATAATACTAGGCTCGTGGTATGGAACCCGTGTACTGGCCAAACCAAGTGGATC 391 Query 397 CAACACAGAAGGATGGGCTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAA 456 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 392 CAACACAGAACGATGGGCTACATCTGCACCTATGCTCTTGGATCCTACCAAGACAACAAA 451 Query 457 TCC-GACAATAATAGCTACAAAATATTGAGCCACGGGATTTATGGTGGCCAAGAGTTCGA 515 ||| || ||||| ||||||||||||||||| || |||| |||| || |||||| ||||| Sbjct 452 TCCGGA-AATAAGAGCTACAAAATATTGAG-CA--GGATATATGATGACCAAGAATTCGA 507 Query 516 AATTTATGAGATTAACTCAAATTCATGGAGGATTCTTGATGTCACTGTGGACTCCT-CTT 574 |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | | Sbjct 508 AATTTATGAGATTAACTCAAATTCATGGAGGATTCTTGATGTAACTGTGGATTCCTACAT 567 Query 575 TGTACATTGAAAACGTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAATG 634 || |||| | ||||| ||||||||||| ||||||||||||||||||| ||||| ||| | Sbjct 568 -GTCCATTCAGAACGTGTCTTTGAAGGGAAAGACTTACTGGTTTGCTAGAGATGAAAAAG 626 Query 635 ATAAACCGTGCGACCTATTCTTGATCTGTTTTGATTATACGACAGAAAGATTTGAACGTC 694 | |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 627 AGAAAC--TGCT-CCTATTCTTGATCTGTTTTGATTATACAACAGAAAGATTTGAACGTC 683 Query 695 TATGTCTTCCGTATCAG-ATTCCGTATTTTCGTAAT-A---C-A-TCTCTATCAGTTGTT 747 ||||||| || |||| | || || ||| | || || | | | | |||||||||||| Sbjct 684 TATGTCTACCTTATCCGCAT-CCATATCATGGTTATCAAAACGAGTATCTATCAGTTGTC 742 Query 748 AAAGAAGAGAAACTTTCCGTGTTATTACAACCTTCCCTTACATCGAAGACACAGATATGG 807 | ||||||||||||||| |||||| |||||| | |||||||| |||| | |||||||| Sbjct 743 AGAGAAGAGAAACTTTCTGTGTTACTACAACGTGAACTTACATCAAAGATAGAGATATGG 802 Query 808 GTGACAAATAAGATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGTGGAT 867 ||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| Sbjct 803 GTGACAAATAAGATTGGTGAGACCAAAGTGTTGTCGTGGATCAAGTTCGTAGCGGTGGAT 862 Query 868 TTGAAGCCTGAGATTAAATATGGCATAAAATTCTTGGTCGATGAGGAGAACAAAGTCCTT 927 |||| ||||||| ||| || ||||||||| |||||||||||||||||||| |||||||| Sbjct 863 TTGACGCCTGAGTTTAGATTTGGCATAAACTTCTTGGTCGATGAGGAGAAGAAAGTCCTC 922 Query 928 GTGTATGAG-CAAAATTTTGTAATAAACGGCAAAAACAACATGATATACGTCGTTGGAGA 986 |||| | | |||||| ||||| ||||||||||||||| || ||||| | |||||||| Sbjct 923 GTGTGT-ACTCAAAATATTGTATTAAACGGCAAAAACA---TGGTATACATTGTTGGAGA 978 Query 987 GGACAACGAAGTTAGGGAAGTGG-TGTTTAGA-GTCGGATTAAAACCATTATTCTTTTAT 1044 ||||||| ||||||||||||||| | ||| || | || ||| |||||||| || |||||| Sbjct 979 GGACAACAAAGTTAGGGAAGTGGCT-TTT-GAAGACGAATTCAAACCATTCTTGTTTTAT 1036 Query 1045 TATGTTCCAAGTTTGACTCAAATCCGGCAAGGTAATGATTAA 1086 |||||||||| |||||||||||||| |||||| |||||||| Sbjct 1037 TATGTTCCAACTTTGACTCAAATCCATCAAGGTTATGATTAA 1078 > Ahg342715 jgi|Araly1|342715|fgenesh1_pg.C_scaffold_3002478 Length=1089 Score = 383 bits (207), Expect = 2e-105 Identities = 377/455 (83%), Gaps = 28/455 (6%) Strand=Plus/Plus Query 348 TACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATTCAACACAGAAG 407 |||||| |||||||| |||||||||||||| ||| ||||||||||||| |||||||||| Sbjct 417 TACTAGCCTCGTGGTGTGGAACCCGTGTACCGGTCAAACCAAGTGGATCCAACACAGAAA 476 Query 408 GATGGGCTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAATCCGACAATAA 467 | | |||||||||| | |||||||||||| || ||||||||||| ||||| | |||||| Sbjct 477 GCTTTGCTACATCTGTACCTATGCTCTTGGTTCTTACCAAGACAACAAATCTGGCAATAA 536 Query 468 TAGCTACAAAATATTGAGCCACGGGATTTATGGTGGCCAAG----AG--TTCGAAATTTA 521 ||||||||||||||||||| | || |||||||| ||||| || ||||||||||| Sbjct 537 GAGCTACAAAATATTGAGCCGCAGGTTTTATGGTCACCAAGACCCAGAATTCGAAATTTA 596 Query 522 TGAGATTAACTCAAATTCAT---GGAGGATTCTTGATGTCACTGTGGACT---CCTCTTT 575 |||||||||||| ||||||| ||||||| |||||||||| |||||||| || | | Sbjct 597 TGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTGCACCGATAT 656 Query 576 GTACATT-GAAAACGTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAATG 634 ||||||| | ||||| |||||||| || ||||||||||||||||||||||||| ||| | Sbjct 657 GTACATTCG-GAACGTGTCTTTGAAAGGAAAGACTTACTGGTTTGCTACAGATGAAAAAG 715 Query 635 ATAAAC--CGTGCGACCTATTCTTGATCTGTTTTGATTATACGACAGAAAGATTTGAACG 692 | |||| | | || | ||||||| ||| |||||||| |||| ||||||||||||||||| Sbjct 716 AGAAACAAC-T-CGGCTTATTCTTAATCAGTTTTGATCATACAACAGAAAGATTTGAACG 773 Query 693 TCTATGTCTTCCGTATCAG-ATTCCGTAT--T--TTCGT-AATAC-A-TCTCTATCAGTT 744 ||||||||| || |||| | | ||| ||| | || | || || | | |||||| ||| Sbjct 774 TCTATGTCTACCTTATCCGCA-TCCATATCATGGTT-ATCAAAACGAGTATCTATCTGTT 831 Query 745 GTTAAAGAAGAGAAACTTTCCGTGTTATTACAACC 779 |||| |||||||||||||||||||||||||||||| Sbjct 832 GTTAGAGAAGAGAAACTTTCCGTGTTATTACAACC 866 Score = 141 bits (76), Expect = 1e-32 Identities = 110/126 (87%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 172 ATGTGGAA-GAATTTTGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTAT 230 |||||||| | | || || ||| |||||| ||||||||||| || |||||||||||||| Sbjct 1 ATGTGGAATG-AGTTAGGGGTTTATTCGATGAGCATCAATCTACATAGAGTTTCACCTAT 59 Query 231 AGAGGTCACTGGTGAACTTAACCTAATCGACCATCATTCTAGTTTAGGT-ATGTTCAGGA 289 |||||||||||||||||||||||||||||||| |||||||||||||| | | |||| ||| Sbjct 60 AGAGGTCACTGGTGAACTTAACCTAATCGACCCTCATTCTAGTTTAGATCA-GTTCGGGA 118 Query 290 ACTCTC 295 ||||| Sbjct 119 CCTCTC 124 > Ahg472870 jgi|Araly1|472870|fgenesh2_kg.1__2824__AT1G25141.1 Length=3192 Score = 163 bits (88), Expect = 2e-39 Identities = 191/237 (81%), Gaps = 22/237 (9%) Strand=Plus/Plus Query 346 AATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAG-TGGATTCAAC-ACA 403 |||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | | Sbjct 7 AATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTCAAAC-AAGGTGGATTCAACGAGA 65 Query 404 GAAG-G--ATGGGCT-ACATCTG-CAACTATGCTCTTGGATCCTACCAAGACAAAAAATC 458 || | ||| || | | | | ||||||| |||| |||||||||||||| |||| || Sbjct 66 AAATTGTTATGA-CTTATA-C-GACAACTATTCTCTCGGATCCTACCAAGATAAAAGATG 122 Query 459 CGACAATAATAGCTACAAAATATTGAGC-CAC--GGGATTTATGG-TG-G-CCA-AGAGT 511 | || ||||||||||||| |||||| || ||| ||| ||| ||| | | ||| | | | Sbjct 123 CAACGATAATAGCTACAATATATTG-GCACACACGGG-TTT-TGGCTATGACCACAAA-T 178 Query 512 TCGAAATTTATGAGATTAACTCAAATTCATGGAGGATTCTTGATGTCACTGTGGACT 568 || |||||||||| || ||||| ||||||||||||||| |||||| |||| | |||| Sbjct 179 TCCAAATTTATGAAATAAACTCCAATTCATGGAGGATTATTGATGCCACTTTCGACT 235 Score = 104 bits (56), Expect = 1e-21 Identities = 109/134 (81%), Gaps = 6/134 (4%) Strand=Plus/Plus Query 747 TAAAGAAGAGAAACTTTCCGTGTTATTACAAC-CTTCCCTTACATCGAAGA-CACAGATA 804 |||||| |||||||||||| |||||| ||||| | | ||| ||| || | || ||||| Sbjct 348 TAAAGAGGAGAAACTTTCCATGTTATCACAACGC-GCAATTAAATC-AAAACCAGAGATA 405 Query 805 TGGGTGACAAATAAGATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGTG 864 |||||||||||||||||||||||| || ||||| ||||||||| || | | ||| | ||| Sbjct 406 TGGGTGACAAATAAGATTGGTGAGACCCAAGTGGTGTCGTGGACCATGGTCTTAGCTGTG 465 Query 865 GATTTG-AAGCCTG 877 ||||| || |||| Sbjct 466 TATTTGCAA-CCTG 478 > Ahg318995 jgi|Araly1|318995|fgenesh1_pm.C_scaffold_3002011 Length=1152 Score = 102 bits (55), Expect = 5e-21 Identities = 83/96 (86%), Gaps = 4/96 (4%) Strand=Plus/Plus Query 16 CTTCCAGAGGATTTGTTAGTGGAGATACTCTGC-CGCGTTCCGGCTACATCTTTGAAACG 74 |||||| ||||||| ||| ||| ||||||| | | |||||||| |||||||||| ||| Sbjct 13 CTTCCACCGGATTTGGTAGAGGAAATACTCT-CTAGGGTTCCGGCGACATCTTTGATACG 71 Query 75 ATTACGATCTACTTGCAAACTATGGAAC-CATTTAT 109 |||||||||||||||||||||||||||| | ||||| Sbjct 72 ATTACGATCTACTTGCAAACTATGGAACAC-TTTAT 106 > Ahg930217 jgi|Araly1|930217|scaffold_302674.1 Length=1162 Score = 95.3 bits (51), Expect = 8e-19 Identities = 98/119 (82%), Gaps = 10/119 (8%) Strand=Plus/Plus Query 1 ATGATGATG-CCAGAACTT-CCAGAGGATTTGTTAGTGGAGATACTCTGC-CGCG-TTCC 56 ||||||||| || || ||| || | |||||| ||| || ||||||| | | | |||| Sbjct 21 ATGATGATGTCC-GATCTTCCCCG-CGATTTGGTAGAAGAAATACTCT-CTAG-GATTCC 76 Query 57 GGCTACATCTTTGAAACGATTACGATCTACTTGCAAACTATGGAAC-CATTTATACAAC 114 ||| |||||| ||||||||||||||||||||||||||||||||||| | ||||| |||| Sbjct 77 GGCCACATCTGTGAAACGATTACGATCTACTTGCAAACTATGGAACAC-TTTATTCAAC 134 > Ahg904936 jgi|Araly1|904936|Al_scaffold_0003_2064 Length=918 Score = 63.9 bits (34), Expect = 2e-09 Identities = 49/56 (88%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 346 AATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTA-AAACCAAGTGGATTCAAC 400 |||||||||||||||||||||||||||| | ||| | |||||| |||||| |||| Sbjct 292 AATACTAGGCTCGTGGTATGGAACCCGTATT-TGGAACAAACCAGGTGGATCCAAC 346 > Ahg934692 jgi|Araly1|934692|scaffold_402680.1 Length=953 Score = 52.8 bits (28), Expect = 5e-06 Identities = 38/42 (90%), Gaps = 3/42 (7%) Strand=Plus/Plus Query 737 TATCAGTTGTTAAAGAAGAGAAACTTTCCGTGTTATTACAAC 778 |||||||||||||||||||||||||||| | ||| || |||| Sbjct 533 TATCAGTTGTTAAAGAAGAGAAACTTTC-G-GTT-TTGCAAC 571 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40448414937 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5