BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G25460.1
Length=1086
Score E
Sequences producing significant alignments: (Bits) Value
Ahg930679 jgi|Araly1|930679|scaffold_303136.1 1109 0.0
Ahg930677 jgi|Araly1|930677|scaffold_303134.1 1027 0.0
Ahg930681 jgi|Araly1|930681|scaffold_303138.1 1022 0.0
Ahg342715 jgi|Araly1|342715|fgenesh1_pg.C_scaffold_3002478 383 2e-105
Ahg472870 jgi|Araly1|472870|fgenesh2_kg.1__2824__AT1G25141.1 163 2e-39
Ahg318995 jgi|Araly1|318995|fgenesh1_pm.C_scaffold_3002011 102 5e-21
Ahg930217 jgi|Araly1|930217|scaffold_302674.1 95.3 8e-19
Ahg904936 jgi|Araly1|904936|Al_scaffold_0003_2064 63.9 2e-09
Ahg934692 jgi|Araly1|934692|scaffold_402680.1 52.8 5e-06
> Ahg930679 jgi|Araly1|930679|scaffold_303136.1
Length=1135
Score = 1109 bits (600), Expect = 0.0
Identities = 949/1112 (85%), Gaps = 46/1112 (4%)
Strand=Plus/Plus
Query 1 ATGATGATGCCAGAACTTCCAGAGGATTTGTTAGTGGAGATACTCTGCCGCGTTCCGGCT 60
||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 23 ATGATGATGCCGGAACTTCCAGAAGATTTGTTAGAGGAGATACTCTGCCGCGTTCCGGCT 82
Query 61 ACATCTTTGAAACGA-TTACGATCTACTTGCAAACTATGGAACCATTTATACAACGATAA 119
||||||||||||| | ||||||| |||||||||||||||||||| ||||| |||||||||
Sbjct 83 ACATCTTTGAAAC-AGTTACGATGTACTTGCAAACTATGGAACCGTTTATTCAACGATAA 141
Query 120 GAGATTCAAAAGCAAACACTGCCATAAAGCCCCAAGGCAATCTCTGATTCTCATGTGGAA 179
||||||| ||| ||||||| || |||||||||||||||||||||||||||||||| |||
Sbjct 142 GAGATTCGCAAGAAAACACTTCCGTAAAGCCCCAAGGCAATCTCTGATTCTCATGTTGAA 201
Query 180 GAATTTTGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTATAGAGGTCAC 239
|||||| || ||||||||||| ||| |||||||||| |||||||||| |||||| |||
Sbjct 202 GAATTTAGGGTTTTCTTCGATGAGCTTCAATCTCCACCGAGTTTCACCAATAGAGATCAT 261
Query 240 TGGTGAACTTAACCTAATCGACCATCATTCTAGTTTAGGTATGTTCAGGAACTCTCCATT 299
||||||||||||||||||||||| ||||||||||| | | | |||| || || || |
Sbjct 262 TGGTGAACTTAACCTAATCGACCCTCATTCTAGTTCATATCTATTCAAGATCTATCAAAG 321
Query 300 ATGTCAAACTTC---TGGCTTATTGTTATGCGT---CAACGTGGAGAAAATTAATACTAG 353
| ||| | ||| || |||||||||||||| |||| ||||| | | ||||||
Sbjct 322 CTATCACAGTTCAGACGGTTTATTGTTATGCGTCAACAACATGGAG-GGA--AGTACTAG 378
Query 354 GCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATTCAACACAGAAGGATGGG 413
|||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| ||
Sbjct 379 GCTCGTGGTATGGAACCCGTGTACTGGTCAAACCAAGTGGATCCAACACAGAAAGATAGG 438
Query 414 CTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAATCC-GACAATAATAGCT 472
|||| |||||| |||| |||||||||||||||||||||| |||||| || ||||||||||
Sbjct 439 CTACTTCTGCACCTATTCTCTTGGATCCTACCAAGACAACAAATCCGGA-AATAATAGCT 497
Query 473 ACAAAATATTGAGCCACGGGATTTATGGTGGCCAAGAGTTCGAAATTTATGAGATTAACT 532
||||||||||||||| ||||| ||||| || ||| ||||||||||||||||||||||
Sbjct 498 ACAAAATATTGAGCCGTAGGATTAATGGTTACCCAGAATTCGAAATTTATGAGATTAACT 557
Query 533 CAAATTCATGGAGG-ATTCTTGATGTCACTGTGGACTCCTC-TTT--GTACATTGAAAAC 588
|||||||||||||| || ||||||||||||||||||| | | ||| |||| || |||||
Sbjct 558 CAAATTCATGGAGGCAT-CTTGATGTCACTGTGGACTGCACCTTTATGTACCTTCAAAAC 616
Query 589 GTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAATGATAAACCG-T-GCG 646
|| ||||||||||| ||||||||||||||||||| ||||| ||| || |||| | | | |
Sbjct 617 GTGTCTTTGAAGGGAAAGACTTACTGGTTTGCTAGAGATGAAAAAGAGAAACAGCTTG-G 675
Query 647 ACCTATTCTT---GATCTGTTTTGATTATACGACAGAAAGATTTGAACGTCTATGTCTTC 703
| || |||| |||| ||||||||||||| ||||||||||||||||||||| |||||
Sbjct 676 -CTTAATCTTAATGATCAGTTTTGATTATACAACAGAAAGATTTGAACGTCTACATCTTC 734
Query 704 CGTATCAG-ATTCC-GTATTTTCGTAATACATC--TCTATCAGTTGTTAAAGAAGAGAAA 759
||||| || || || | ||||||| || |||| | | || ||||||| ||| ||||||
Sbjct 735 CGTATAAGTAT-CCTG-ATTTTCG-AA-ACATTGATTTTTCTGTTGTTAGAGACGAGAAA 790
Query 760 CTTTCCGTGTTATTACAAC-CTTCCCTTACATCGAAGACACAGATATGGGTGACAAATAA 818
||||||||||||||||||| | || ||||| |||||||| | |||||||||||||||||
Sbjct 791 CTTTCCGTGTTATTACAACGCAACC-TTACACCGAAGACAGAAATATGGGTGACAAATAA 849
Query 819 GATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGTGGATTTGAAGCCTGA 878
|||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 850 GATTGGTGAGACCAAAGTGTTGTCTTGGATCAAGGGCTTAACGGTGGATTTGAAGCCTGA 909
Query 879 GATTAAATATGGCATAAAATTCTTGGTCGATGAGGAGAACAAAGTCCTTGTGTATGAG-C 937
| ||| | ||||||||||||||||||||||||||||||| |||||||| |||| | | |
Sbjct 910 GCTTAGAGATGGCATAAAATTCTTGGTCGATGAGGAGAAGAAAGTCCTCGTGTGT-ACTC 968
Query 938 AAAATTTTGTA-ATAAACGGCAAAAACAACATGATATACGTCGTTGGAGAGGACAACGAA 996
||||| || | ||||| |||||| | | || ||||| ||||||||||||||||| ||
Sbjct 969 AAAATAATGGATATAAAAGGCAAA--CTA--TGGTATACATCGTTGGAGAGGACAACAAA 1024
Query 997 GTTAGGGAAGTGG-TGTTTAGAGTCGGATTAAAACCATTATTCTTTTA-TTATGTTCCAA 1054
||||||||||||| | ||| ||| || ||| |||||||| || || | |||||||||||
Sbjct 1025 GTTAGGGAAGTGGCT-TTTGGAGACGAATTCAAACCATT-TTGGTTGAATTATGTTCCAA 1082
Query 1055 GTTTGACTCAAATCCGGCAAGGTAATGATTAA 1086
||||||||||||||| ||||||| ||||||||
Sbjct 1083 GTTTGACTCAAATCCAGCAAGGTGATGATTAA 1114
> Ahg930677 jgi|Araly1|930677|scaffold_303134.1
Length=1195
Score = 1027 bits (556), Expect = 0.0
Identities = 937/1114 (84%), Gaps = 53/1114 (5%)
Strand=Plus/Plus
Query 1 ATGATGATGCCAGAACTTCCAGAGGATTTGTTAGTGGAGATACTCTGCCGCGTTCCGGCT 60
||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 23 ATGATGATGCCAGAACTTCCAAAGGATTTGTTAGAGGAGATACTCTGCCGCGTTCCGGCA 82
Query 61 ACATCTTTGAAACGATTACGATCTACTTGCAAACTATGGAACCATTTATACAACGATAAG 120
|||||| ||||||||||||||||||||||||||| |||||||| |||| | |||||||||
Sbjct 83 ACATCTCTGAAACGATTACGATCTACTTGCAAACGATGGAACCTTTTAAAAAACGATAAG 142
Query 121 AGATTCAAAAGCAAACACTGCCATAAAGCCCCAAGGCAATCTCTGATTCTCATGTGGAA- 179
||||||| ||| ||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct 143 AGATTCACAAGAAAACACTTCCACAAAGCCCCAAGACAATCTCTGATTCTCATGTGGAAT 202
Query 180 GAATTTTGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTATAGAGGTCAC 239
| | ||||| ||||||||||| | ||||||||| || |||||||||||||||||||||||
Sbjct 203 G-AGTTTGGGTTTTCTTCGATGAACATCAATCTACACAGAGTTTCACCTATAGAGGTCAC 261
Query 240 TGGTGAACTTAACCTAATCGACCATCATTCTAGTTTAGGT-ATGTTCAGGAACTCTCCAT 298
||||||||||||||||||||||| ||||| |||||||| | | |||||||||||||| |
Sbjct 262 TGGTGAACTTAACCTAATCGACCCTCATTATAGTTTAGATCA-GTTCAGGAACTCTCTAC 320
Query 299 TATGTCAAACTTCTGGCTTATTGTTATGCGTCAA-CGT--G-GAGAA-AAT----T--AA 347
| || || ||||||||||||||||||| || | ||| | || || || | ||
Sbjct 321 TCTGCCACACTTCTGGCTTATTGTTATT-GTTATGCGTCTGTGACAACAACGAAGTGGAA 379
Query 348 --TACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATTCAACACAGA 405
|||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||
Sbjct 380 GGTACTAGGCTCGTGGTATGGAACCCGTGTACCGGTCTAACCAAGTGGATCCAACACAGA 439
Query 406 AGGATGGGCTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAATCCGACAAT 465
| | | |||||||||| | |||||||||||| || ||||||||||| ||||| | ||||
Sbjct 440 AAGCTTTGCTACATCTGTACCTATGCTCTTGGTTCTTACCAAGACAACAAATCTGGCAAT 499
Query 466 AATAGCTACAAAATATTGAGCCACGGGATTTATGGTGGCCAAGA----G--TTCGAAATT 519
|| ||||||||||||||||||| | || |||||||| |||||| | |||||||||
Sbjct 500 AAGAGCTACAAAATATTGAGCCGCAGGTTTTATGGTCACCAAGACCCAGAATTCGAAATT 559
Query 520 TATGAGATTAACTCAAATTCATGGAGGAT--TC-TTGATGTCACTGTGGACTCCTCT--T 574
|||||||||||||| ||||||||||||| || ||||||||| |||||||| | | |
Sbjct 560 TATGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTGCACCGAT 619
Query 575 -TGTACATT-GAAAACGTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAA 632
|||||||| | || ||| |||||||| || ||||||||||||||||||||| ||| |||
Sbjct 620 ATGTACATTCGGAA-CGTGTCTTTGAAAGGAAAGACTTACTGGTTTGCTACAAATGAAAA 678
Query 633 TGATAAAC--CGTGCGACCTATTCTTGATCTGTTTTGATTATACGACAGAAAGATTTGAA 690
|| |||| | | || ||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct 679 AGAGAAACAAC-T-CGGCCTATTCTTAATCAGTTTTGATTATACAACAGAAAGATTTGAA 736
Query 691 CGTCTATGTCTTCCGTATCAG-ATTCCGTATTTTCGTAAT-A---C-A-TCTCTATCAGT 743
||||||||||| || |||| | || || ||| | || || | | | |||||||| ||
Sbjct 737 CGTCTATGTCTACCTTATCCGCAT-CCATATCATGGTTATCAAAACGAGTCTCTATCTGT 795
Query 744 TGTTAAAGAAGAGAAACTTTCCGTGTTATTACAACCTTCCCTTACATCGAAGACACAGAT 803
||||| ||||||||||||||| ||||||||||||| | | |||| ||||||||| ||||
Sbjct 796 TGTTAGAGAAGAGAAACTTTCTGTGTTATTACAACGTACATTTACGTCGAAGACAGAGAT 855
Query 804 ATGGGTGACAAATAAGATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGT 863
||||||||||||||||||||||||| ||||||||||||||||||||||| | ||| ||||
Sbjct 856 ATGGGTGACAAATAAGATTGGTGAGACCAAAGTGTTGTCGTGGATCAAGGTCTTAGCGGT 915
Query 864 GGATTTGAAGCCTGAGATTAAATATGGCATAAAATTCTTGGTCGATGAGGAGAACAAAGT 923
|||||||| ||||||| |||| || ||||||||||||||||||||||||||| |||||
Sbjct 916 GGATTTGACGCCTGAGCCCAAATTTGACATAAAATTCTTGGTCGATGAGGAGAAGAAAGT 975
Query 924 CCTTGTGTATGAG-CAAAATTTTGTA-ATAAACGGCAAAAACAACATGATATACGTCGTT 981
||| |||||| | |||||| || | | ||| | |||| | || ||||| |||||
Sbjct 976 CCTCGTGTAT-ACTCAAAATAATGGATACAAAAGCCAAAGT-AT--TG-TATACATCGTT 1030
Query 982 GGAGAGGACAACGAAGTTAGGGAAGTGG-TGTTTAGAGTCGGATTAAAACCATTATTCTT 1040
||| |||||||| ||||||||||||||| | ||| ||| || ||| |||||||| || ||
Sbjct 1031 GGAAAGGACAACAAAGTTAGGGAAGTGGAT-TTTGGAGACGAATTCAAACCATTTTTGTT 1089
Query 1041 TTATTATGTTCCAAGTTTGACTCAAATCCGGCAA 1074
|||| |||||||| ||||||||||||| ||||
Sbjct 1090 GAATTACGTTCCAAGCTTGACTCAAATCCAGCAA 1123
> Ahg930681 jgi|Araly1|930681|scaffold_303138.1
Length=1098
Score = 1022 bits (553), Expect = 0.0
Identities = 902/1062 (85%), Gaps = 58/1062 (5%)
Strand=Plus/Plus
Query 66 TTTGAAACGATTACGATCTACTTGCAAACTATGGAACCATTTATACAACGATAAGAGATT 125
||||||||| ||||||| |||||||||||||||| || |||||| ||| |||||||||||
Sbjct 34 TTTGAAACGGTTACGATGTACTTGCAAACTATGGCACAATTTATTCAAGGATAAGAGATT 93
Query 126 CAAAAGCAAACACTGCCATAAAGCCCCAAGGCAATCTCTGATTCTCATGTGGAAGAATTT 185
| ||| ||||||| || ||||||| |||||||||||||||||||||||| |||||||||
Sbjct 94 CGCAAGAAAACACTCCCGTAAAGCCTCAAGGCAATCTCTGATTCTCATGTTGAAGAATTT 153
Query 186 TGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTATAGAGGTCACTGGTGA 245
||| || |||||||| ||||||||||| || |||||||||||||||||||||||||||||
Sbjct 154 TGGGTTATCTTCGATGAGCATCAATCTACACAGAGTTTCACCTATAGAGGTCACTGGTGA 213
Query 246 ACTTAACCTAATCGAC-CATCATTCTAGTTTAG---GTAT-G-T---T-CAGGAACTCTC 295
|||||||||||||||| | |||||||||||||| | | | | | |||||||| |
Sbjct 214 ACTTAACCTAATCGACTC-TCATTCTAGTTTAGAATCTTTAGATCACTACAGGAACTAT- 271
Query 296 CATTA-TGTCAAACTTC---TGGCTTATTGTTATGCGTCAAC-GTGG-A--GAA------ 341
|| | ||||| | ||| |||||||||||||| |||||| ||| | |||
Sbjct 272 CAAAACTGTCACAGTTCAGACGGCTTATTGTTATGTGTCAACAATGGTATGGAATCCTCC 331
Query 342 A---A--TTAATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATT 396
| | |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 332 ATGGAGGATAATACTAGGCTCGTGGTATGGAACCCGTGTACTGGCCAAACCAAGTGGATC 391
Query 397 CAACACAGAAGGATGGGCTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAA 456
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 392 CAACACAGAACGATGGGCTACATCTGCACCTATGCTCTTGGATCCTACCAAGACAACAAA 451
Query 457 TCC-GACAATAATAGCTACAAAATATTGAGCCACGGGATTTATGGTGGCCAAGAGTTCGA 515
||| || ||||| ||||||||||||||||| || |||| |||| || |||||| |||||
Sbjct 452 TCCGGA-AATAAGAGCTACAAAATATTGAG-CA--GGATATATGATGACCAAGAATTCGA 507
Query 516 AATTTATGAGATTAACTCAAATTCATGGAGGATTCTTGATGTCACTGTGGACTCCT-CTT 574
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |
Sbjct 508 AATTTATGAGATTAACTCAAATTCATGGAGGATTCTTGATGTAACTGTGGATTCCTACAT 567
Query 575 TGTACATTGAAAACGTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAATG 634
|| |||| | ||||| ||||||||||| ||||||||||||||||||| ||||| ||| |
Sbjct 568 -GTCCATTCAGAACGTGTCTTTGAAGGGAAAGACTTACTGGTTTGCTAGAGATGAAAAAG 626
Query 635 ATAAACCGTGCGACCTATTCTTGATCTGTTTTGATTATACGACAGAAAGATTTGAACGTC 694
| |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 627 AGAAAC--TGCT-CCTATTCTTGATCTGTTTTGATTATACAACAGAAAGATTTGAACGTC 683
Query 695 TATGTCTTCCGTATCAG-ATTCCGTATTTTCGTAAT-A---C-A-TCTCTATCAGTTGTT 747
||||||| || |||| | || || ||| | || || | | | | ||||||||||||
Sbjct 684 TATGTCTACCTTATCCGCAT-CCATATCATGGTTATCAAAACGAGTATCTATCAGTTGTC 742
Query 748 AAAGAAGAGAAACTTTCCGTGTTATTACAACCTTCCCTTACATCGAAGACACAGATATGG 807
| ||||||||||||||| |||||| |||||| | |||||||| |||| | ||||||||
Sbjct 743 AGAGAAGAGAAACTTTCTGTGTTACTACAACGTGAACTTACATCAAAGATAGAGATATGG 802
Query 808 GTGACAAATAAGATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGTGGAT 867
||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||
Sbjct 803 GTGACAAATAAGATTGGTGAGACCAAAGTGTTGTCGTGGATCAAGTTCGTAGCGGTGGAT 862
Query 868 TTGAAGCCTGAGATTAAATATGGCATAAAATTCTTGGTCGATGAGGAGAACAAAGTCCTT 927
|||| ||||||| ||| || ||||||||| |||||||||||||||||||| ||||||||
Sbjct 863 TTGACGCCTGAGTTTAGATTTGGCATAAACTTCTTGGTCGATGAGGAGAAGAAAGTCCTC 922
Query 928 GTGTATGAG-CAAAATTTTGTAATAAACGGCAAAAACAACATGATATACGTCGTTGGAGA 986
|||| | | |||||| ||||| ||||||||||||||| || ||||| | ||||||||
Sbjct 923 GTGTGT-ACTCAAAATATTGTATTAAACGGCAAAAACA---TGGTATACATTGTTGGAGA 978
Query 987 GGACAACGAAGTTAGGGAAGTGG-TGTTTAGA-GTCGGATTAAAACCATTATTCTTTTAT 1044
||||||| ||||||||||||||| | ||| || | || ||| |||||||| || ||||||
Sbjct 979 GGACAACAAAGTTAGGGAAGTGGCT-TTT-GAAGACGAATTCAAACCATTCTTGTTTTAT 1036
Query 1045 TATGTTCCAAGTTTGACTCAAATCCGGCAAGGTAATGATTAA 1086
|||||||||| |||||||||||||| |||||| ||||||||
Sbjct 1037 TATGTTCCAACTTTGACTCAAATCCATCAAGGTTATGATTAA 1078
> Ahg342715 jgi|Araly1|342715|fgenesh1_pg.C_scaffold_3002478
Length=1089
Score = 383 bits (207), Expect = 2e-105
Identities = 377/455 (83%), Gaps = 28/455 (6%)
Strand=Plus/Plus
Query 348 TACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAGTGGATTCAACACAGAAG 407
|||||| |||||||| |||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct 417 TACTAGCCTCGTGGTGTGGAACCCGTGTACCGGTCAAACCAAGTGGATCCAACACAGAAA 476
Query 408 GATGGGCTACATCTGCAACTATGCTCTTGGATCCTACCAAGACAAAAAATCCGACAATAA 467
| | |||||||||| | |||||||||||| || ||||||||||| ||||| | ||||||
Sbjct 477 GCTTTGCTACATCTGTACCTATGCTCTTGGTTCTTACCAAGACAACAAATCTGGCAATAA 536
Query 468 TAGCTACAAAATATTGAGCCACGGGATTTATGGTGGCCAAG----AG--TTCGAAATTTA 521
||||||||||||||||||| | || |||||||| ||||| || |||||||||||
Sbjct 537 GAGCTACAAAATATTGAGCCGCAGGTTTTATGGTCACCAAGACCCAGAATTCGAAATTTA 596
Query 522 TGAGATTAACTCAAATTCAT---GGAGGATTCTTGATGTCACTGTGGACT---CCTCTTT 575
|||||||||||| ||||||| ||||||| |||||||||| |||||||| || | |
Sbjct 597 TGAGATTAACTCGAATTCATGGAGGAGGATCCTTGATGTCAATGTGGACTGCACCGATAT 656
Query 576 GTACATT-GAAAACGTTTCTTTGAAGGGTAAGACTTACTGGTTTGCTACAGATGGAAATG 634
||||||| | ||||| |||||||| || ||||||||||||||||||||||||| ||| |
Sbjct 657 GTACATTCG-GAACGTGTCTTTGAAAGGAAAGACTTACTGGTTTGCTACAGATGAAAAAG 715
Query 635 ATAAAC--CGTGCGACCTATTCTTGATCTGTTTTGATTATACGACAGAAAGATTTGAACG 692
| |||| | | || | ||||||| ||| |||||||| |||| |||||||||||||||||
Sbjct 716 AGAAACAAC-T-CGGCTTATTCTTAATCAGTTTTGATCATACAACAGAAAGATTTGAACG 773
Query 693 TCTATGTCTTCCGTATCAG-ATTCCGTAT--T--TTCGT-AATAC-A-TCTCTATCAGTT 744
||||||||| || |||| | | ||| ||| | || | || || | | |||||| |||
Sbjct 774 TCTATGTCTACCTTATCCGCA-TCCATATCATGGTT-ATCAAAACGAGTATCTATCTGTT 831
Query 745 GTTAAAGAAGAGAAACTTTCCGTGTTATTACAACC 779
|||| ||||||||||||||||||||||||||||||
Sbjct 832 GTTAGAGAAGAGAAACTTTCCGTGTTATTACAACC 866
Score = 141 bits (76), Expect = 1e-32
Identities = 110/126 (87%), Gaps = 4/126 (3%)
Strand=Plus/Plus
Query 172 ATGTGGAA-GAATTTTGGTTTTTCTTCGATTAGCATCAATCTCCAAAGAGTTTCACCTAT 230
|||||||| | | || || ||| |||||| ||||||||||| || ||||||||||||||
Sbjct 1 ATGTGGAATG-AGTTAGGGGTTTATTCGATGAGCATCAATCTACATAGAGTTTCACCTAT 59
Query 231 AGAGGTCACTGGTGAACTTAACCTAATCGACCATCATTCTAGTTTAGGT-ATGTTCAGGA 289
|||||||||||||||||||||||||||||||| |||||||||||||| | | |||| |||
Sbjct 60 AGAGGTCACTGGTGAACTTAACCTAATCGACCCTCATTCTAGTTTAGATCA-GTTCGGGA 118
Query 290 ACTCTC 295
|||||
Sbjct 119 CCTCTC 124
> Ahg472870 jgi|Araly1|472870|fgenesh2_kg.1__2824__AT1G25141.1
Length=3192
Score = 163 bits (88), Expect = 2e-39
Identities = 191/237 (81%), Gaps = 22/237 (9%)
Strand=Plus/Plus
Query 346 AATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTAAAACCAAG-TGGATTCAAC-ACA 403
|||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |
Sbjct 7 AATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTCAAAC-AAGGTGGATTCAACGAGA 65
Query 404 GAAG-G--ATGGGCT-ACATCTG-CAACTATGCTCTTGGATCCTACCAAGACAAAAAATC 458
|| | ||| || | | | | ||||||| |||| |||||||||||||| |||| ||
Sbjct 66 AAATTGTTATGA-CTTATA-C-GACAACTATTCTCTCGGATCCTACCAAGATAAAAGATG 122
Query 459 CGACAATAATAGCTACAAAATATTGAGC-CAC--GGGATTTATGG-TG-G-CCA-AGAGT 511
| || ||||||||||||| |||||| || ||| ||| ||| ||| | | ||| | | |
Sbjct 123 CAACGATAATAGCTACAATATATTG-GCACACACGGG-TTT-TGGCTATGACCACAAA-T 178
Query 512 TCGAAATTTATGAGATTAACTCAAATTCATGGAGGATTCTTGATGTCACTGTGGACT 568
|| |||||||||| || ||||| ||||||||||||||| |||||| |||| | ||||
Sbjct 179 TCCAAATTTATGAAATAAACTCCAATTCATGGAGGATTATTGATGCCACTTTCGACT 235
Score = 104 bits (56), Expect = 1e-21
Identities = 109/134 (81%), Gaps = 6/134 (4%)
Strand=Plus/Plus
Query 747 TAAAGAAGAGAAACTTTCCGTGTTATTACAAC-CTTCCCTTACATCGAAGA-CACAGATA 804
|||||| |||||||||||| |||||| ||||| | | ||| ||| || | || |||||
Sbjct 348 TAAAGAGGAGAAACTTTCCATGTTATCACAACGC-GCAATTAAATC-AAAACCAGAGATA 405
Query 805 TGGGTGACAAATAAGATTGGTGAGGCCAAAGTGTTGTCGTGGATCAAGTTTTTAACGGTG 864
|||||||||||||||||||||||| || ||||| ||||||||| || | | ||| | |||
Sbjct 406 TGGGTGACAAATAAGATTGGTGAGACCCAAGTGGTGTCGTGGACCATGGTCTTAGCTGTG 465
Query 865 GATTTG-AAGCCTG 877
||||| || ||||
Sbjct 466 TATTTGCAA-CCTG 478
> Ahg318995 jgi|Araly1|318995|fgenesh1_pm.C_scaffold_3002011
Length=1152
Score = 102 bits (55), Expect = 5e-21
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand=Plus/Plus
Query 16 CTTCCAGAGGATTTGTTAGTGGAGATACTCTGC-CGCGTTCCGGCTACATCTTTGAAACG 74
|||||| ||||||| ||| ||| ||||||| | | |||||||| |||||||||| |||
Sbjct 13 CTTCCACCGGATTTGGTAGAGGAAATACTCT-CTAGGGTTCCGGCGACATCTTTGATACG 71
Query 75 ATTACGATCTACTTGCAAACTATGGAAC-CATTTAT 109
|||||||||||||||||||||||||||| | |||||
Sbjct 72 ATTACGATCTACTTGCAAACTATGGAACAC-TTTAT 106
> Ahg930217 jgi|Araly1|930217|scaffold_302674.1
Length=1162
Score = 95.3 bits (51), Expect = 8e-19
Identities = 98/119 (82%), Gaps = 10/119 (8%)
Strand=Plus/Plus
Query 1 ATGATGATG-CCAGAACTT-CCAGAGGATTTGTTAGTGGAGATACTCTGC-CGCG-TTCC 56
||||||||| || || ||| || | |||||| ||| || ||||||| | | | ||||
Sbjct 21 ATGATGATGTCC-GATCTTCCCCG-CGATTTGGTAGAAGAAATACTCT-CTAG-GATTCC 76
Query 57 GGCTACATCTTTGAAACGATTACGATCTACTTGCAAACTATGGAAC-CATTTATACAAC 114
||| |||||| ||||||||||||||||||||||||||||||||||| | ||||| ||||
Sbjct 77 GGCCACATCTGTGAAACGATTACGATCTACTTGCAAACTATGGAACAC-TTTATTCAAC 134
> Ahg904936 jgi|Araly1|904936|Al_scaffold_0003_2064
Length=918
Score = 63.9 bits (34), Expect = 2e-09
Identities = 49/56 (88%), Gaps = 2/56 (4%)
Strand=Plus/Plus
Query 346 AATACTAGGCTCGTGGTATGGAACCCGTGTACTGGTA-AAACCAAGTGGATTCAAC 400
|||||||||||||||||||||||||||| | ||| | |||||| |||||| ||||
Sbjct 292 AATACTAGGCTCGTGGTATGGAACCCGTATT-TGGAACAAACCAGGTGGATCCAAC 346
> Ahg934692 jgi|Araly1|934692|scaffold_402680.1
Length=953
Score = 52.8 bits (28), Expect = 5e-06
Identities = 38/42 (90%), Gaps = 3/42 (7%)
Strand=Plus/Plus
Query 737 TATCAGTTGTTAAAGAAGAGAAACTTTCCGTGTTATTACAAC 778
|||||||||||||||||||||||||||| | ||| || ||||
Sbjct 533 TATCAGTTGTTAAAGAAGAGAAACTTTC-G-GTT-TTGCAAC 571
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 40448414937
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5