BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G25610.1
Length=3609
Score E
Sequences producing significant alignments: (Bits) Value
Ahg322706 jgi|Araly1|322706|fgenesh1_pm.C_scaffold_5000250 5906 0.0
Ahg471476 jgi|Araly1|471476|fgenesh2_kg.1__1430__AT1G13210.1 3282 0.0
> Ahg322706 jgi|Araly1|322706|fgenesh1_pm.C_scaffold_5000250
Length=3609
Score = 5906 bits (3198), Expect = 0.0
Identities = 3474/3611 (96%), Gaps = 4/3611 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGGTCCAAGTCGGAGAAGAAGAAGATTACATCTAAGCAAGATCTATTCCTACACT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTGGTCCAAGTCGGAGAAGAAGAAGATTACATCTAAGCAAGATCTATTCCTACACT 60
Query 61 TGTGGTAAATCAAGTTTCCAAGAAGATCACTCTAATATAGGAGGACCCGGTTTCTCTCGT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TGTGGTAAATCAAGTTTCCAAGAAGATCACTCTAATATAGGAGGACCCGGTTTCTCTCGT 120
Query 121 GTCGTTTATTGTAACGAACCGGGTTCTCCGGCAGCTGAACGTCGGAACTACGCCGGAAAT 180
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct 121 GTCGTTTATTGTAACGAACCGGGTTCTCCGGCAGCTGAACGCCGGAATTACGCCGGCAAT 180
Query 181 TACGTCCGGTCAACAAAATACACCGTTGCTTCTTTCTTCCCTAAATCTCTCTTCGAGCAG 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 181 TACGTCCGGTCAACAAAATACACCCTTGCTTCTTTCTTCCCTAAATCTCTCTTCGAGCAG 240
Query 241 TTCCGTCGTGTCGCTAACTTTTACTTTCTTGTCACCGGAATCTTATCGTTGACTGATCTC 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TTTCGTCGTGTCGCTAACTTTTACTTTCTTGTCACCGGAATCTTATCGTTGACTGATCTC 300
Query 301 TCTCCTTATGGAGCCGTTAGTGCTCTCTTGCCTCTTGCTCTCGTCATCTCCGCCACAATG 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TCTCCTTATGGAGCCGTTAGTGCTCTCTTGCCTCTTGCTCTCGTCATCTCCGCCACAATG 360
Query 361 GTTAAAGAAGGTATCGAAGATTGGCGCCGGAAACAACAGGATATTGAGGTGAATAACAGA 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 361 GTTAAAGAAGGTATCGAAGATTGGCGCCGGAAACAACAGGATATTGAAGTGAATAACAGA 420
Query 421 AAAGTGAAAGTACACGACGGAAATGGAATATTCCGGCAAGAAGAATGGAGGAATCTAAGA 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AAAGTGAAGGTACACGACGGAAATGGAATATTCCGGCAAGAAGAATGGAGGAATCTAAGA 480
Query 481 GTAGGAGACATAGTAAGAGTTGAAAAGGACGAGTTTTTTCCGGCGGATCTTTTGCTATTG 540
||||| || || |||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 481 GTAGGTGATATCGTAAGAGTCGAAAAAGACGAGTTTTTTCCGGCGGATCTTTTGCTATTG 540
Query 541 TCATCAAGCTACGAAGATTCGGTTTGTTATGTAGAGACGATGAATCTCGACGGTGAGACG 600
|||||||||||||| |||||| |||||||||||||||| |||||||| ||||| || |||
Sbjct 541 TCATCAAGCTACGAGGATTCGATTTGTTATGTAGAGACTATGAATCTTGACGGAGAAACG 600
Query 601 AATCTGAAAGTCAAACAAGGACTTGAAGCAACTTCTTCATTGTTAAATCAAGATTCTGAT 660
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 601 AATCTGAAAGTGAAACAAGGACTTGAAGCAACTTCTTTATTGTTAAATCAAGATTCTGAT 660
Query 661 TTTAAAGATTTTAGAGGCGTTGTTAGATGTGAAGATCCAAATGTGAATCTTTATGTGTTC 720
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 TTTAAAGATTTTAGTGCCGTTGTTAGATGTGAAGATCCAAATGTGAATCTTTATGTGTTC 720
Query 721 GTTGGAACTTTGGCTCTTGAAGAAGAGAGATTTCCATTGTCGATTCAACAGATTCTTCTC 780
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 GTTGGTACTTTGGCTCTTGAAGAAGAGAGATTTCCATTGTCGATTCAACAGATTCTTCTT 780
Query 781 CGTGATTCTAAGCTTAGAAACACAGAGTATGTGTACGGAGCTGTCGTTTTCACCGGACAT 840
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 781 CGTGATTCTAAGCTTAGAAACACAGAGTATGTGTATGGAGCTGTCGTTTTCACCGGACAT 840
Query 841 GACACAAAGGTGATACAGAATTCAACTGATCCACCATCAAAGAGAAGTAGGATCGAGAGG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 GACACAAAGGTGATACAGAATTCAACTGATCCACCATCAAAGAGAAGTAGGATCGAGAGG 900
Query 901 ACAATGGACAAGATCATCTACTTAATGTTTGGTCTTGTCTTTCTAATGTCATTCGTTGGA 960
| |||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||
Sbjct 901 AAAATGGACAAGATTATTTACTTAATGTTTGGTATTGTCTTTCTAATGTCATTCGTTGGA 960
Query 961 TCAATCATCTTTGGAGTTGAAACAAGAGAGGATAAAGTCAAGAACGGAAGAACAGAGAGA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 TCAATCATCTTTGGAGTTGAAACAAGAGAGGATAAAGTCAAGAACGGAAGAACAGAGAGA 1020
Query 1021 TGGTATTTGAAACCAGATGATGCAGATATCTTCTTTGATCCAGAAAGAGCTCCAATGGCT 1080
|||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||
Sbjct 1021 TGGTATTTGAAACCAGATGAAGCAGATATCTTCTTTGATCCAGAAAAAGCTCCAGTGGCT 1080
Query 1081 GCAATA-TACCACTTCTTCACTGCTACAATGCTGTATAGTTACTTCATCCCGATTTCGCT 1139
||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 1081 GCAATTCT-CCACTTCTTCACTGCTACAATGTTATATAGTTACTTCATCCCGATTTCGCT 1139
Query 1140 TTACGTTTCGATTGAGATCGTTAAAGTTCTTCAGAGCATTTTCATCAATAGAGACATTCA 1199
|| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1140 GTATGTTTCGATTGAGATTGTTAAAGTTCTTCAGAGCATTTTCATCAACAGAGACATTCA 1199
Query 1200 TATGTACTATGAAGAAACGGATAAACCCGCGCAGGCACGGACTTCAAATTTGAATGAAGA 1259
||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1200 TATGTACTACGAAGAAACGGATAAACCTGCGCAGGCACGGACTTCGAATTTGAATGAAGA 1259
Query 1260 ACTCGGTATGGTTGATACGATTCTATCCGATAAAACGGGGACTTTAACGTGCAATTCAAT 1319
||||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||
Sbjct 1260 GCTCGGTATGGTTGATACGATTCTTTCCGATAAAACCGGGACTTTGACTTGCAATTCAAT 1319
Query 1320 GGAGTTTATCAAGTGTTCTATCGCGGGTAAGGCTTATGGACGCGGTATAACTGAAGTTGA 1379
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1320 GGAGTTTATCAAGTGTTCTATCGCGGGTACGGCTTATGGACGCGGTATAACTGAAGTTGA 1379
Query 1380 AAGAGCTATGGCTGTGAGAAGCGGTGGTTCGCCTTTGGTTAATGAAGATTTGGATGTTGT 1439
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1380 GAGAGCTATGGCTGTGAGAAGCGGTGGTTCGCCTTTGGTTAACGAAGATTTGGATGTTGT 1439
Query 1440 TGTGGATCAGTCTGGTCCTAAGGTTAAAGGGTTTAACTTTGAGGATGAAAGGGTTATGAA 1499
|||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1440 TGTGGATCTGTCTGCTCCTAAGGTTAAAGGGTTTAACTTTGAGGATGAAAGGATTATGAA 1499
Query 1500 TGGGAATTGGGTGAGGCAGCCTGAGGCTGCCGTGTTGCAGAAGTTTTTCAGATTGCTTGC 1559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 TGGGAATTGGGTGAGGCAGCCTGAGGCTGCCGTGTTGCAGAAGTTTTTCAGATTGCTTGC 1559
Query 1560 TGTGTGTCACACGGCAATACCTGAGACCGATGAAGAGTCCGGGAATGTCTCTTATGAAGC 1619
||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1560 TGTGTGTCATACGGCAATACCTGAGACTGATGAAGAGTCCGGGAATGTTTCTTATGAAGC 1619
Query 1620 TGAGTCTCCGGATGAAGCTGCGTTTGTTGTTGCAGCCCGAGAGTTCGGGTTCGAGTTCTT 1679
||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct 1620 TGAGTCTCCGGATGAAGCTGCGTTTGTCGTTGCAGCTCGAGAGTTCGGTTTCGAGTTCTT 1679
Query 1680 TAACCGGACACAAAATGGGATCTCTTTTCGTGAACTGGATCTTGTATCGGGAGAGAAAGT 1739
|||||||||||||||||||||||||||||| ||| |||| |||||||| ||||| |||||
Sbjct 1680 TAACCGGACACAAAATGGGATCTCTTTTCGAGAATTGGACCTTGTATCAGGAGAAAAAGT 1739
Query 1740 TGAAAGGGTTTATAGGTTACTAAACGTTCTTGAATTCAATAGCACTAGGAAGAGAATGTC 1799
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1740 CGAAAGGGTTTATAAGTTACTAAACGTTCTTGAATTCAATAGCACAAGGAAGAGAATGTC 1799
Query 1800 TGTTATTGTAAGAGACGATGACGGGAAGCTCTTGCTGTTGTCTAAGGGAGCTGATAATGT 1859
||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1800 GGTTATTGTACGAGACGATGACGGAAAGCTCTTGCTGTTGTCTAAAGGAGCTGATAATGT 1859
Query 1860 AATGTTCGAAAGACTTGCAAAGAACGGTCGTCAATTCGAGGCAAAAACCCAAGAACATGT 1919
||||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||
Sbjct 1860 GATGTTTGAAAGACTTGCAAAGACCGGTCGTCAATTCAAGGCGAAAACCCAAGAACATGT 1919
Query 1920 AAACCAATATGCAGATGCAGGTCTAAGGACTCTAGTACTTGCATACCGTGAGGTTGATGA 1979
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1920 AAACCAATATGCAGATGCAGGTCTAAGGACTCTAATACTTGCATACCGTGAGGTTGATGA 1979
Query 1980 GAATGAGTACATAGAGTTCAATAAGAGTTTCAATGAAGCTAAGGCTTCCGTGAGCGAGGA 2039
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct 1980 GAATGAGTACATAGAGTTCAACAAGAATTTCAATGAAGCTAAGGCTTCCGTGAGCGAGGA 2039
Query 2040 TCGTGAAGCTTTAATAGACGAAATCACGGATAAAATGGAACGTGATCTTATTCTCCTTGG 2099
|||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct 2040 TCGTGAAGCTTTAATAGACGAAATCACGGATAGGATGGAACGCGATCTCATTCTCCTTGG 2099
Query 2100 TGCTACTGCTGTTGAAGACAAACTTCAGAATGGGGTCCCGGAATGTATTGACAAACTTGC 2159
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2100 TGCTACTGCTGTGGAGGACAAACTTCAGAATGGGGTCCCGGAATGTATTGACAAACTTGC 2159
Query 2160 TCAAGCTGGGATTAAGATTTGGGTTCTAACTGGAGACAAAATGGAAACAGCTATCAATAT 2219
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2160 TCAAGCTGGAATTAAGATTTGGGTTCTAACTGGGGACAAAATGGAAACAGCTATCAATAT 2219
Query 2220 TGGATTTGCATCTAGTTTACTAAGACAAGAGATGAAGCAGATCATCATCAATCTTGAGAC 2279
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 TGGATTTGCTTCTAGTTTACTAAGACAAGAGATGAAGCAGATCATCATCAATCTTGAGAC 2279
Query 2280 ACCTCAGATCAAATCTCTAGAGAAATCTGGAGGCAAAGACGAAATCGAATTGGCATCAAG 2339
|||||| |||||||||||||||||||||||||||||||| ||||||||| |||| |||||
Sbjct 2280 ACCTCATATCAAATCTCTAGAGAAATCTGGAGGCAAAGATGAAATCGAACTGGCGTCAAG 2339
Query 2340 AGAAAGCGTTGTGATGCAACTACAAGAAGGAAAGGCCTTACTCGCTGCATCAGGCGCGAG 2399
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2340 GGAAAGCGTTGTGATGCAACTACAAGAAGGAAAGGCCTTACTCGCTGCATCAGGCGCAAG 2399
Query 2400 CTCTGAAGCGTTTGCTTTGATCATCGATGGGAAATCGCTAACCTACGCCCTCGAGGACGA 2459
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2400 CTCTGAAGCATTTGCTTTGATCATCGATGGGAAATCGCTAACCTACGCACTCGAGGACGA 2459
Query 2460 AATCAAGAAAATGTTTCTTGATCTTGCCACTAGTTGTGCCTCTGTGATATGCTGTAGATC 2519
||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct 2460 AATCAAGAAAACGTTTCTTGATCTTGCCACTGGTTGTGCCTCTGTGATTTGCTGTAGATC 2519
Query 2520 ATCACCTAAACAGAAAGCATTGGTAACGCGACTGGTTAAGTCCGGAACTGGGAAAACAAC 2579
|||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 2520 ATCACCTAAACAGAAAGCATTGGTTACGCGACTAGTTAAGTCCGGAACTGGAAAAACAAC 2579
Query 2580 TTTAGCAATTGGCGATGGAGCAAACGATGTAGGTATGCTTCAAGAAGCAGACATTGGTGT 2639
||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 2580 TTTAGCAATTGGCGATGGAGCGAATGATGTAGGGATGCTTCAAGAAGCAGACATTGGTGT 2639
Query 2640 AGGAATAAGCGGTGTTGAAGGAATGCAAGCAGTAATGTCTAGTGATATTGCCATTGCCCA 2699
||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| ||
Sbjct 2640 AGGAATAAGCGGTGTTGAAGGAATGCAAGCAGTGATGTCTAGCGATATCGCCATTGCTCA 2699
Query 2700 ATTCCGATATCTAGAACGTTTATTGCTT-GTCCATGGTCATTGGTGTTACAGCAGAATCG 2758
||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||
Sbjct 2700 ATTCCGATATCTAGAGCGTTTATTG-TTAGTCCATGGCCATTGGTGTTACAGCAGAATCG 2758
Query 2759 CATCCATGATATGTTACTTCTTCTACAAGAACATCACCTTCGGAGTCACGGTGTTCTTAT 2818
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 2759 CATCCATGATATGTTACTTCTTCTACAAGAACGTCACCTTCGGAGTCACAGTGTTCTTAT 2818
Query 2819 ATGAAGCATATACTTCCTTCTCTGGACAACCAGCATATAACGACTGGTTTCTTTCTCTTT 2878
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2819 ATGAAGCATATACTTCCTTCTCTGGACAACCTGCATATAACGACTGGTTTCTTTCTCTTT 2878
Query 2879 TCAACGTCTTCTTCTCCTCTCTTCCCGTCATTGCCCTAGGAGTCTTTGATCAAGACGTCT 2938
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 TCAACGTCTTCTTCTCTTCTCTTCCCGTCATTGCCCTAGGAGTCTTTGATCAAGACGTCT 2938
Query 2939 CAGCTCGCTTCTGTTACAAGTTTCCATTGCTATACCAAGAAGGTGTGCAGAACATTCTCT 2998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2939 CAGCTCGCTTCTGTTACAAGTTTCCATTGCTATACCAAGAAGGTGTGCAGAACATTCTCT 2998
Query 2999 TCAGCTGGAAAAGGATTATCGGATGGATGTTCAATGGATTCATAAGCGCTCTCGCCATTT 3058
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 2999 TCAGCTGGAAAAGGATTATTGGATGGATGTTCAATGGATTCATTAGCGCTCTCGCCATTT 3058
Query 3059 TCTTCCTCTGCAAGGAATCTCTTAAACACCAGCTATTTGACCCAGATGGCAAAACCGCAG 3118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3059 TCTTCCTCTGCAAGGAATCTCTTAAACACCAGCTATTTGACCCAGATGGCAAAACCGCAG 3118
Query 3119 GCCGGGAAATCCTCGGTGGAACAATGTACACTTGCGTTGTGTGGGTTGTCAATCTCCAAA 3178
||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||
Sbjct 3119 GCCGGGAAATCCTCGGTGGAACAATGTACACCTGCGTCGTGTGGGTCGTCAATCTCCAAA 3178
Query 3179 TGGCTTTATCAATAAGTTACTTCACTTGGGTCCAACACATTGTGATCTGGGGATCAATAG 3238
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 3179 TGGCTTTATCAATAAGTTACTTCACTTGGGTCCAACACATTGTGATTTGGGGATCAATAG 3238
Query 3239 CCTTCTGGTACATCTTCCTCATGATCTATGGCGCTATGACCCCAAGTTTCTCTACCGATG 3298
|||| |||||||||||||||||||||||||| |||||| | |||||||||||||||||||
Sbjct 3239 CCTTTTGGTACATCTTCCTCATGATCTATGGAGCTATGGCTCCAAGTTTCTCTACCGATG 3298
Query 3299 CTTACATGGTCTTCCTCGAAGCCCTAGCTCCTGCTCCTTCATACTGGCTCACGACTCTCT 3358
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 3299 CTTACATGGTCTTCCTCGAAGCCCTAGCTCCTGCTCCTTCCTACTGGCTCACGACTCTAT 3358
Query 3359 TTGTGATGATCTTCGCTTTGATCCCTTACTTCGTCTACAAGTCAGTGCAAATGAGGTTTT 3418
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3359 TCGTGATGATCTTCGCTTTGATCCCTTACTTCGTCTACAAGTCAGTGCAAATGAGGTTTT 3418
Query 3419 TCCCTAAATACCATCAAATGATTCAATGGATTCGGTACGAGGGTCACTCCAATGATCCTG 3478
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 3419 TCCCTAAATACCATCAAATGATTCAGTGGATTCGGTACGAGGGTCACTCTAATGATCCTG 3478
Query 3479 AGTTCGTTGAGATGGTGAGGCAGAGGTCGATTAGGCCCACCACCGTCGGATACACCGCGA 3538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 AGTTCGTTGAGATGGTGAGGCAGAGGTCGATTAGGCCCACCACCGTCGGATACACCGCGA 3538
Query 3539 GAAGAGCAGCTAGTGTACGGCGCTCCGCTAGGTTTCACGATCAGATCTATAAGGATCTTG 3598
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3539 GAAGAGCTGCTAGTGTACGGCGCTCCGCGAGGTTTCACGATCAGATCTATAAGGATCTTG 3598
Query 3599 TCGGTGTCTAA 3609
||||| |||||
Sbjct 3599 TCGGTATCTAA 3609
> Ahg471476 jgi|Araly1|471476|fgenesh2_kg.1__1430__AT1G13210.1
Length=3834
Score = 3282 bits (1777), Expect = 0.0
Identities = 3022/3618 (84%), Gaps = 105/3618 (3%)
Strand=Plus/Plus
Query 22 AGAAGAAGATTACATCTAAGCAAGATCTATTCCTACACTTGTGGTAAATCAAGTTTCCAA 81
||||||||||||||||| ||||| || || | | || || ||||||||||||| |||
Sbjct 80 AGAAGAAGATTACATCTGAGCAACATATACGCATTCAAAGGTCGTAAATCAAGTTTTCAA 139
Query 82 GAAGATCACTCTA-ATATAGGAGGACCCGGTTTCTCTCGTGTCGTTTATTGTAACGAACC 140
||||| || || | | ||||||||||| |||||||| || || |||||||||||||||||
Sbjct 140 GAAGACCATTC-ACACATAGGAGGACCTGGTTTCTCACGAGTTGTTTATTGTAACGAACC 198
Query 141 GGGTTCTCCGGCAGCTGAACGTCGGAACTACGCCGGAAATTACGTCCGGTCAACAAAATA 200
||||||||| |||||||| || |||||| ||||||| || ||||||||||| |||||
Sbjct 199 AAATTCTCCGGCGGCTGAACGACGTAACTACACCGGAAACTATGTCCGGTCAACTAAATA 258
Query 201 CAC-CGTTGCTTCTTTCTTCCCTAAATCTCTCTTCGAGCAGTTCCGTCGTGTCGCTAACT 259
||| | ||||||||| | || ||||| |||||||| ||||||||||||||||| || |
Sbjct 259 CACTC-CAGCTTCTTTCATACCAAAATCACTCTTCGAACAGTTCCGTCGTGTCGCCAA-T 316
Query 260 TT-TACTTTCTTGTCACCGGAATCTTATCGTTGAC-TGATCTCTCTCCTTATGGAGCCGT 317
|| ||||| || ||||||||||||||||||||||| | |||||||||||| | || |
Sbjct 317 TTCTACTTCCTCGTCACCGGAATCTTATCGTTGACAT-CTCTCTCTCCTTACAGCCCCAT 375
Query 318 TAGTGCTCTCTTGCCTCT-TGCTCTCGTCATCTCCGCCACAATGGTTAAAGAAGGTATCG 376
|||||||||||| ||||| || |||||||| |||| | ||||||||||||| ||||
Sbjct 376 TAGTGCTCTCTTACCTCTCACCT-TCGTCATCGCCGCAAGTATGGTTAAAGAAGCAATCG 434
Query 377 AAGATTGGCGCCGGAAACAACAGGATATTGAGGTGAATAACAGAAAAGTGAAAGTACACG 436
|||| ||| | |||||| |||||||||| || ||||||| || |||||||| || ||||
Sbjct 435 AAGACTGGGGTCGGAAAAAACAGGATATAGAAATGAATAATAGGAAAGTGAAGGTTCACG 494
Query 437 ACGGAAATGGAATA-TTCCGGCAAGAAGAATGGAGGAATC-TAAGAGTAGGAGACATAGT 494
|||||||||||| | ||||||| ||||| ||||||||||| ||| ||| ||||| |||||
Sbjct 495 ACGGAAATGGAA-AGTTCCGGCGAGAAGGATGGAGGAATCTTAA-AGTCGGAGATATAGT 552
Query 495 AAGAGTTGAAAAGGACGAGTTTTTTCCGGCGGATCTTTTGCTATTGTCATCAAGCTACGA 554
|||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 553 AAGAGTTGAAAAAGACGAGTTTTTTCCGGCGGATCTTTTGCTTTTATCATCGAGCTACGA 612
Query 555 AGATTCGGTTTGTTATGTAGAGACGATGAATCTCGACGGTGAGACGAATCTGAAAGTCAA 614
||||||| ||||||||||||||||||||||||| ||||| || |||||||||||||| ||
Sbjct 613 AGATTCGATTTGTTATGTAGAGACGATGAATCTTGACGGAGAAACGAATCTGAAAGTGAA 672
Query 615 ACAAGGACTT-GAAGCAACTTCTTC-ATTGTTAAATCAAGATTCTGATTTTAAAGATTTT 672
|||||| || ||||| |||||||| | ||| || ||||||| ||||| ||||| ||
Sbjct 673 ACAAGG-TTTAGAAGCGACTTCTTCGGCT-TTACATGAAGATTCAGATTTCAAAGA-GTT 729
Query 673 AGAGGC-GTTGTTAGATGTGAAGATCCAAATGTGA-ATCTTTAT-GTGTTCGTTGGAACT 729
| | || |||| | ||||||||||||||||| | |||||||| | || |||||||||
Sbjct 730 AAAAGCTCTTGTGAAATGTGAAGATCCAAATG-CAGATCTTTATACT-TTTGTTGGAACT 787
Query 730 TTGGC-TCTTGAAGAAGAGAGATTTCCATTGTCGATTCA-ACAGATTCTTCTCCGTGATT 787
|| || | |||||||| ||||||| |||||||||||| | |||| ||||||| || ||||
Sbjct 788 TT-GCATTTTGAAGAACAGAGATTACCATTGTCGATT-ACACAGCTTCTTCTTCGAGATT 845
Query 788 CTAAGCTTAGAAACACAGAGTATGTGTACGGAGCTGTCGTTTTCACCGGACATGACACAA 847
| ||||||||||||||||||||||| || || ||||| || ||||| |||||||||||||
Sbjct 846 CCAAGCTTAGAAACACAGAGTATGTTTATGGTGCTGTTGTCTTCACTGGACATGACACAA 905
Query 848 AGGTGATACAGAATTCAACTGATCCACCATCAAAGAGAAGTAGGATCGAGAGGACAATGG 907
||||||| || || ||||||||||||||||| |||||||| || |||||||| | |||||
Sbjct 906 AGGTGATTCAAAACTCAACTGATCCACCATCGAAGAGAAGCAGAATCGAGAGAAAAATGG 965
Query 908 ACAAGATCATCTACTTAATGTTTGGTCTTGTCTTTCTAATGTCATTCGTTGGATCAATCA 967
| || ||||||||||| ||||| ||| |||| ||| | ||||| || | || |||||
Sbjct 966 ATAAAATCATCTACTTGATGTTCGGTGTTGTGTTTTTGATGTCGTTTATCGGTTCAATTG 1025
Query 968 TCTTTGGAGTTGAAACAAGAGAGGATAAAGTCAAG-AA---CGGAAGAACAGAGAGATGG 1023
||||||| ||||| || ||||| |||| ||| || || ||||||||||||||||||
Sbjct 1026 TCTTTGGTGTTGAGACTAGAGAAGATAGAGT-GAGAAATGGAGGAAGAACAGAGAGATGG 1084
Query 1024 TATTTGAA-ACCAGATGATGCAGATATCTTCTTTGATCCAGAAAGAGCTCCAATGGCTGC 1082
|| || || |||||| || ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1085 TACTT-AAGACCAGACGAGGCAGATATCTTCTTTGACCCAGACAGAGCTCCAATGGCTGC 1143
Query 1083 AATATACCACTTCTTCACTGCTACAATGCTGTATAGTTACTTCATCCCGATTTCGCTTTA 1142
|| ||||| ||||||||||| ||||| || ||||||||||| ||||||||||||||
Sbjct 1144 CATTTACCATTTCTTCACTGCGGTTATGCTCTACAGTTACTTCATACCGATTTCGCTTTA 1203
Query 1143 CGTTTCGATTGAGATCGTTAAAGTTCTTCAGAGCATTTTCATCAATAGA-GACATTCATA 1201
|| || || || |||||||||||||||||||| |||||||||| | | ||||||| ||
Sbjct 1204 TGTCTCTATCGAAATCGTTAAAGTTCTTCAGAGTGTTTTCATCAACA-ATGACATTCTTA 1262
Query 1202 TGTACTATGAAGA-AACGGATAAACCCGCGCAGGC-ACGGACTTCAAATTTGAATGAAGA 1259
||||||| || || || |||||||| ||||| || | | || || ||| | ||||||||
Sbjct 1263 TGTACTACGAGGAGAA-TGATAAACCTGCGCACGCTA-GAACGTCTAATCTCAATGAAGA 1320
Query 1260 ACTCGGTATGGTTGATACGATTCTATCCGATAAAACGGGGACTTTAACGTGCAATTCAAT 1319
||||| ||||||||||| ||| ||||||||||||| || || || || |||||||| ||
Sbjct 1321 GCTCGGGATGGTTGATACCATTTTATCCGATAAAACCGGAACATTGACCTGCAATTCCAT 1380
Query 1320 GGAGTTTATCAAGTGTTCTATCGCGGGTAA-GGCTTATGGACGCGGTATAACTGAAGTTG 1378
|||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1381 GGAGTTTATCAAATGTTCTATCGCGGG-AACAGCTTATGGACGCGGTATAACTGAAGTTG 1439
Query 1379 AAAGAGCTATGGCTGTGAGAAGCGGTGGTTCGCCTTTGGTTAATGAAGATTTGGATGTTG 1438
||||| |||||||| |||||||| |||||| ||||||| |||||||||||||||||
Sbjct 1440 AAAGATCTATGGCTATGAGAAGCAATGGTTCAAATTTGGTTGGTGAAGATTTGGATGTTG 1499
Query 1439 TTGTGGATCAGTCTGGTCCTAAGGTTAAAGGGTTTAACTTT-GAGGATGAAAGGGTTATG 1497
| ||||| ||||||||||||||| | ||||||||||| ||| ||||||| |||||||||
Sbjct 1500 TAGTGGACCAGTCTGGTCCTAAGATCAAAGGGTTTAA-TTTCCAGGATGAGAGGGTTATG 1558
Query 1498 AATGGGAATTGGGTGAGGCAGCCTGAGGCTGCCGTGTTGCAGAAGTTTTTCAGATTGCTT 1557
|| ||||||||||| | ||||| || || || || ||||||||||||||||| ||| ||
Sbjct 1559 AAAGGGAATTGGGTTAAGCAGCGAGATGCAGCGGTTTTGCAGAAGTTTTTCAGGTTG-TT 1617
Query 1558 -GCTGTGTGTCACACGGCAATACCTGAGACCGATGAAGAGTCCGGGAATGTCTCTTATGA 1616
||||| ||||||||||| ||||| || |||||||||| | |||| ||||||||||||
Sbjct 1618 AGCTGTTTGTCACACGGCTATACCCGAAACCGATGAAGCCACGGGGAGTGTCTCTTATGA 1677
Query 1617 AGCTGAGTCTCCGGATGAAGCTGCGTTTGTTGTTGCAGCCCGAGAGTTCGGGTTCGAGTT 1676
||||||||||| ||||||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct 1678 GGCTGAGTCTCCTGATGAAGCTGCATTTGTTGTTGCGGCTCGAGAATTCGGGTTTGAGTT 1737
Query 1677 CTTTAACCGGACACAAAATGGGATCTCTTTTCGTGAACTGGATCTTGTATC-GGGAGAGA 1735
||||| ||| || ||||| ||||| ||||| |||||| ||||||||| ||| |||| | |
Sbjct 1738 CTTTAGCCGCACGCAAAACGGGATTTCTTTCCGTGAATTGGATCTTGCATCTGGGA-A-A 1795
Query 1736 A-AGTTGAAAGGGTTTATAGGTTACTAAACGTTCTTGAATTCAATAGCACTAGGAAGAGA 1794
| ||| ||||| || ||| ||||| ||||||||||||| || || ||| | || ||||||
Sbjct 1796 ACAGTAGAAAGAGTATATCGGTTATTAAACGTTCTTGAGTTTAACAGCGCGAGAAAGAGA 1855
Query 1795 ATGTCTGTTATTGTAAGAGACGATGACGGGAAGCTCTTGCTG-T--TGTCTAAGGGAGCT 1851
||||| |||||||| | ||||| || ||| || ||| ||| | |||| || ||||||
Sbjct 1856 ATGTCGGTTATTGTGCGCGACGAAGATGGG-AG-ACTT-CTGTTACTGTCCAAAGGAGCT 1912
Query 1852 GATAATGTAATGTTCGAAAGACTTG-CAAAGAACGGTCGTCAA-TTCGAGGCA-AAAACC 1908
|| ||||| ||||| |||||||||| |||| ||||| | || ||||| | | || ||
Sbjct 1913 GACAATGTGATGTTTGAAAGACTTGCCAAA-AACGGAAG-AAAGTTCGAAG-AGAAGACT 1969
Query 1909 CAAGAACATGTAAACCAATATGCAGATGCAGGTCTAAGGACTCTAG-TACTTGCATACCG 1967
| |||||| || || |||||||||||||||| |||||||| | | |||||||||||||
Sbjct 1970 CGAGAACACGTTAATGAATATGCAGATGCAGGGCTAAGGAC-ATTGATACTTGCATACCG 2028
Query 1968 TGAGGTTGATGAGAATGAGTACATAGAGTTCAATAAGAGTTTCAATGAAGCT-AAGGCTT 2026
||||||||||||||||||||| ||||| |||| |||| |||||||||||| || | |
Sbjct 2029 TGAGGTTGATGAGAATGAGTATATAGAATTCAGCAAGAACTTCAATGAAGCTAAAAAC-T 2087
Query 2027 CCGTGAGC-GAGGATCGTGA-AGCTTTAATAGACGAAATCACGGATAAAATGGAACGTGA 2084
| |||| | | ||||||||| ||| ||||| || |||||||| ||| | |||||||| |
Sbjct 2088 CGGTGA-CAGCGGATCGTGAGAGC-TTAATTGATGAAATCACAGATCAGATGGAACGCAA 2145
Query 2085 TCTT-ATTCTCCTTGGTGCTACTGCTGTTGAAGACAAACTTCAGAATGGGGTCCCGGAAT 2143
| || |||||||||||||||||||||||||| || |||||||| |||||||| ||||| |
Sbjct 2146 T-TTGATTCTCCTTGGTGCTACTGCTGTTGAGGATAAACTTCAAAATGGGGTTCCGGATT 2204
Query 2144 GTATTGACAAACTTGCTCAAGCTGGGATTAAGATTTGGGTTCTAACTGGAGACAAAATGG 2203
| || ||||| || |||||||| || || ||||||||||||||||| |||||||||||||
Sbjct 2205 GCATCGACAAGCTAGCTCAAGCAGGAATAAAGATTTGGGTTCTAACCGGAGACAAAATGG 2264
Query 2204 AAACAGCTATCAATATTGGATTTGCATCTAGTTTACTAAGACAAGAGATGAAGCAGATCA 2263
| || || |||||||| |||||||| | |||||||||||||||||||||||| |||||||
Sbjct 2265 AGACTGCAATCAATATCGGATTTGCTTGTAGTTTACTAAGACAAGAGATGAAACAGATCA 2324
Query 2264 TCATCAATCTTGAGACACCTCAGATCAAATC-TCTAGAGAAATCTGGAGGCAAAGACGAA 2322
|||| |||||||||||||| || |||||| | | | |||||| |||| || ||||| ||
Sbjct 2325 TCATAAATCTTGAGACACCACATATCAAAGCAT-TGGAGAAAGCTGGTGGGAAAGATGAG 2383
Query 2323 ATCGAATTGGCATCAAGAGAAAGCGTTGTGATGCAACTACAAGAA-GGAAAGGCCT-TAC 2380
|| ||| |||||||||||||||||| |||| |||| | ||||| ||||| | || |||
Sbjct 2384 ATTGAACAGGCATCAAGAGAAAGCGTGGTGAAGCAAATGGAAGAAGGGAAA-G-CTCTAC 2441
Query 2381 TCGCTGCATC-AG--GCGCGAG--CTC-TGAAGCGTTTGCTTTGATCATCGATGGGAAAT 2434
|| | ||||| || ||||||| ||| ||| || ||||| |||||||| || ||||| |
Sbjct 2442 TCACAGCATCAAGCAGCGCGAGCTCTCATGAGGCTTTTGCGTTGATCATTGACGGGAAGT 2501
Query 2435 CGCTAACCTACGCCCTCGAGGACGAAATCAAGAA-AATGTTTCTTGATCTT-GCCACTA- 2491
| ||||||||||| || || || || ||||||| || |||||||||| || ||||| |
Sbjct 2502 CACTAACCTACGCTCTTGAAGATGATTTCAAGAAGAA-GTTTCTTGAT-TTAGCCAC-AG 2558
Query 2492 GTTGTGCCTCTGTGATATGCTGTAGATCATCACCTAAACAGAAA-GCATTGGTAACGCGA 2550
| ||||||||||| || ||||| |||||||| |||||||| ||| || ||||| |||||
Sbjct 2559 GATGTGCCTCTGTTATTTGCTGCAGATCATCTCCTAAACA-AAAGGCGTTGGTTACGCGG 2617
Query 2551 CTGGTTAAGTCCGGAACTGGGAAAACAACTTTAGCAATTGGCGATGGAGCAAACGATGTA 2610
|||| || || ||||| ||||| ||||||||||| ||||| ||||||||||| |||||
Sbjct 2618 TTGGTCAAATCTGGAACCGGGAAGACAACTTTAGCGATTGGAGATGGAGCAAATGATGTT 2677
Query 2611 GGTATGCTTCAAGAAGCAGACATTGGTGTAGGAATAAGCGGTGTTGAAGGAATGCAAGCA 2670
|| |||||||||||||| || || ||||| ||||| ||||||||||| |||||||||||
Sbjct 2678 GGAATGCTTCAAGAAGCGGATATCGGTGTTGGAATCAGCGGTGTTGAGGGAATGCAAGCG 2737
Query 2671 GTAATGTCTAGTGATATTGCCATTGCCCAATTCCGATATCTAGAACGTTTATTGCTTGTC 2730
|| |||||||| ||||| |||||||| |||||||| || ||||| || | ||||| |||
Sbjct 2738 GTTATGTCTAGCGATATAGCCATTGCTCAATTCCGTTACCTAGAGCGCCTCTTGCTCGTC 2797
Query 2731 CATGGTCATTGGTGTTACAGCAGAATCGCATCCATGATATGTTACTTCTTCTACAAGAAC 2790
|||||||| ||||| |||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 2798 CATGGTCACTGGTGCTACAGCAGAATCTCATCAATGATATGTTACTTCTTCTACAAGAAT 2857
Query 2791 ATCACCTTCGGAGTCACGGTGTTCTTATATGAAGCATATACTTCCTTCTCTGGACAACCA 2850
||||| || || ||||| ||||||||||| ||||| || || |||||||||| |||||
Sbjct 2858 ATCACTTTTGGTGTCACCGTGTTCTTATACGAAGCCTACACATCCTTCTCTGCTCAACCT 2917
Query 2851 GCATATAACGACTGGTTTCTT-TCTCTTTTCAACGTCTTCTTCTCCTCTCTTCCCGTCAT 2909
|||||||| |||||| ||||| || ||||||||||| |||||||| || ||||| |||||
Sbjct 2918 GCATATAATGACTGG-TTCTTATCGCTTTTCAACGTTTTCTTCTCTTCACTTCCAGTCAT 2976
Query 2910 TGCCCTAGGAGTCTTTGATCAAGACGTCTCAGCTCGCTT-CTGTTACAAGTTTCCATTGC 2968
||| || ||||| ||||||||||||||||||||||| || |||||| ||||| || ||||
Sbjct 2977 TGCTCTCGGAGTTTTTGATCAAGACGTCTCAGCTCG-TTACTGTTATAAGTTCCCGTTGC 3035
Query 2969 TATACCAAGAAGGTGTGCAGAA-CATTCTCTTCAGCTGGAAAAGGATTATCGGATGGATG 3027
||||||||||||| || || || | |||||||||||||||| || || ||||||||||||
Sbjct 3036 TATACCAAGAAGGAGTTCAAAATC-TTCTCTTCAGCTGGAAGAGAATCATCGGATGGATG 3094
Query 3028 TTCAATGGATTCATAAGCGCTCTCGCCATTTTCTTCCTCTGCAAGGAATCTCTTAAACAC 3087
||||| ||| || | | ||| || || |||||||||||||||||||||||||| ||||||
Sbjct 3095 TTCAACGGAGTCTTCACCGCACTAGCTATTTTCTTCCTCTGCAAGGAATCTCTGAAACAC 3154
Query 3088 CAGCTATTTGACCC-AGATGGCAAAACCGCAGGCCGGGAAATCCTCGGTGGAACAATGTA 3146
|| || | |||| | ||||||||||||| ||||| ||||||||||| || ||||||||
Sbjct 3155 CAACTCTACAACCCTA-ATGGCAAAACCGCCGGCCGAGAAATCCTCGGCGGGACAATGTA 3213
Query 3147 CACTTGCGTTGTGTGGGTTGTCAATCTCCAAATGGCTTTATCAATAAGTTACTTCACTTG 3206
||| ||||| || ||||| |||||||||||||||||| || ||||||| || ||||||||
Sbjct 3214 CACGTGCGTAGTCTGGGTCGTCAATCTCCAAATGGCTCTAGCAATAAGCTATTTCACTTG 3273
Query 3207 GGTCCAACACATTGTGATCTGGGGATCAATAGCCTTCTGGTACATCTTCCTCATGATCTA 3266
| ||||||||||||| || ||||| ||| | | ||||||||||||||||||||||||||
Sbjct 3274 GCTCCAACACATTGTAATATGGGGCTCAGTTGTATTCTGGTACATCTTCCTCATGATCTA 3333
Query 3267 TGGCGCTAT-GACCCCAAGTTTCTCTACCGATGCTTACATGGTCTTCCTCGAAGCCCTAG 3325
||| || || | | || || ||||| || |||||||||| |||||| |||||||| |||
Sbjct 3334 TGGAGCCATCG-CTCCTAGCTTCTCCACAGATGCTTACAAAGTCTTCATCGAAGCCTTAG 3392
Query 3326 CTCCTGCTCCTTCATACTGGCTCACGACTCTCTTT-GTGATGATCTTCGCTTTGATCCCT 3384
|||| ||||| || ||||||||||| ||||| ||| |||||| |||||||||||||||||
Sbjct 3393 CTCCAGCTCCATCTTACTGGCTCACCACTCT-TTTCGTGATGTTCTTCGCTTTGATCCCT 3451
Query 3385 TACTTCGTCTACAAGTCAGTGCAAATGAGGTTTTTCCCTAAATACCATCAAATGATTCAA 3444
| |||||||| |||||| || || ||||| || ||||| |||||||||||||||||||
Sbjct 3452 TTCTTCGTCTTCAAGTCGGTTCAGATGAGATTCTTCCCGGGATACCATCAAATGATTCAA 3511
Query 3445 TGGATTCGGTACGAGGGTCACTCCAATGATCCTGAGTTCGTTGAGATGGTGAGGCAGAGG 3504
|||||||||||||||||||| || || ||||| ||||| || || ||||| ||||||||
Sbjct 3512 TGGATTCGGTACGAGGGTCATTCTAACGATCCCGAGTTTGTGGAAATGGTCAGGCAGAGA 3571
Query 3505 TCGATTAGGCCCACCACCGTCGGATACACCGCGAGAAGAGCAGCTAGTGTACGGCGCTCC 3564
|||||| ||||||| || || || | ||| ||||||||||| |||||||||||||| |||
Sbjct 3572 TCGATTCGGCCCACGACGGTTGGTTTCACAGCGAGAAGAGCCGCTAGTGTACGGCGGTCC 3631
Query 3565 GCTAGGTTTCACGATCAG 3582
| ||||||||| ||||||
Sbjct 3632 GGTAGGTTTCATGATCAG 3649
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136322226486
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5