BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G26150.1
Length=1523
Score E
Sequences producing significant alignments: (Bits) Value
Ahg322757 jgi|Araly1|322757|fgenesh1_pm.C_scaffold_5000301 2294 0.0
Ahg896477 jgi|Araly1|896477|Al_scaffold_0005_443 1906 0.0
Ahg484384 jgi|Araly1|484384|fgenesh2_kg.5__376__AT3G26170.1 1500 0.0
Ahg896478 jgi|Araly1|896478|Al_scaffold_0005_444 1022 0.0
> Ahg322757 jgi|Araly1|322757|fgenesh1_pm.C_scaffold_5000301
Length=1509
Score = 2294 bits (1242), Expect = 0.0
Identities = 1423/1512 (94%), Gaps = 6/1512 (0%)
Strand=Plus/Plus
Query 15 ATGGCAATCTCTTTACTCTGTCTTTTTCTCATCACCTTAGTTTCGTTAATCTTTGTCGTC 74
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1 ATGGCAATCTCTTTACTCTGTCTTTTTCTCATCACCTTCGTTTCGTTAATCTTTGTCTTC 60
Query 75 AAGAAGATCAAACACTCTAAATGGGATCTTCCTCCAAGCCCTCCTACGTTTCCGGTTATC 134
||||||||||||| || ||||||| ||||||||||||| ||||||||||||||||| |||
Sbjct 61 AAGAAGATCAAACGCTTTAAATGGAATCTTCCTCCAAGTCCTCCTACGTTTCCGGTCATC 120
Query 135 GGAAACTTACACCAAGTTGGAGAATTGCCTCACAGGTCATTTCAACGTCTAGCCGAAAGA 194
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 121 GGAAACTTACACCAAGTTGGAGAATTGCCTCATAGGTCATTTCAACGTCTAGCCGAAAGA 180
Query 195 ACCGGGCATGTTATGCTTCTTCACTTTGGGTTTGTCCCTGTAACTGTAATCTCATCGAGG 254
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 181 ACCGGACATGTTATGCTTCTTCACTTTGGGTTTGTCCCTGTAACTGTTATCTCATCGAGG 240
Query 255 GAAGCAGCTGAAGAAGTTCTTAGAACTCATGACCTAAAGTGTTGCACCAGGCCTAAACTT 314
||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||
Sbjct 241 GAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAAGTGTTGCAGCAGGCCTAAGCTT 300
Query 315 GTCGGGTCGAGGCTAATCTCTCGGGGTTTTAAAGATATCAGTTTTACTCCATACGGTGAA 374
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GTCGGGACGAGGCTAATCTCTCGGGGTTTTAAAGATATCAGTTTTACTCCATACGGTGAA 360
Query 375 GAGTGGAGAGAGCGGCGTAAGTTCTTGGTGCGCGAGCTTTTCTGTTTCAAAAAGGTTCAG 434
|||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 361 GAGTGGAGGGAGCGGCGTAAGTTCTTGGTGCGAGAGCTTTTCTGTTTTAAAAAGGTTCAG 420
Query 435 TATTTT-GGGTA-TATCGTAGAAGAAGAATGTAACTTGCTGGTCAAGAAACTGACGGAAT 492
| |||| | | | | || ||||||||||||||||||| ||||||||||||||| ||||||
Sbjct 421 TCTTTTCGAG-AGT-TCATAGAAGAAGAATGTAACTTTCTGGTCAAGAAACTGTCGGAAT 478
Query 493 CAGCCGTAGGTCGGCCTCCGGTTGATTTGAGTAAATCCCTTTTCTGGCTAGCTGCGAGTA 552
|||| ||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 479 CAGCAGTAGGTCGGGCTCCGGTTGATTTGAGCAAAACCCTTTTCTGGCTAGCTGCGAGTA 538
Query 553 TCCTGTTTAGAATTGCTTTTGGACAGAGTTTCCACGACAACAAGTTTATCGATGAAGACA 612
||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 539 TCCTGTTTAGAATTGCTTTTGGACAGAGTTTCCACGACAACGAGTTTAACGATAAAGACA 598
Query 613 AGATCGATGAACTTATATTTGAAACCGAGACAGCTCAGGCTAGTTTCACTTGCTCTGATT 672
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 599 AGATCGATGAACTTATATTTGAAACCGAGACAGCTCAGGCTAGTTTCACTTACTCTGATT 658
Query 673 TCTTCCCTATCGCCGGCCTTGGATGGCTCGCTGACTGGATTTCCGGGAAACACAGGTGGC 732
|||||||||| ||||| ||||||||||| | ||||||||||||||||||||||| |||||
Sbjct 659 TCTTCCCTATGGCCGGACTTGGATGGCTTGTTGACTGGATTTCCGGGAAACACAAGTGGC 718
Query 733 TCAACAATGTCTTCTTCAAGCTCGATGCTCTGTTTCAACGTGTGATTGATGATCATTCAG 792
||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||
Sbjct 719 TCAACAATGTCTTCTTCAAGCTCGATGCTTTGTTTCAACTTGTGATCGATGATCATTCAA 778
Query 793 ATCCTGGAAGATGGAAAGATCACAAAGATATCGTCGATGTAATGTTGGATGTGATGCATA 852
||||| |||||| |||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 779 ATCCTAGAAGATCGAAAGACCACAAAGATATCGTCGATGTAATGTTGGATGTGGTGCATA 838
Query 853 AACAAGGCAAAGATGATTCTTTGAGGCTCACAATAGATCATATTAAGGGGTTTCTCACGA 912
||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 839 AACAAGGCAAAGATGATTCTTTGAGGCTCACAACAGATCATATTAAGGGACTTCTCACGA 898
Query 913 ATATAATAATCGCAGGGATAGACACAGGAGCTCTTACCATGATATGGGCAATGACAGAGC 972
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 899 ATATAATTATCGCAGGGATAGACACAGGAGCTCTTACTATGATATGGGCAATGACGGAGC 958
Query 973 TCGCAAGAAACCCCGAACTAATGAAGAACGTTCAAGGCGAGATTAGAGACAGCTTTGGCA 1032
||||||||||||| |||||||||||||| |||||||||||||| ||||| || ||||||
Sbjct 959 TCGCAAGAAACCCGGAACTAATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGGCA 1018
Query 1033 ACAATAAGGAGAGAATCACCAAAGAAGATCTAAATAAAGTTCCTTTCTTAAACATGGTGA 1092
|| |||| ||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||
Sbjct 1019 ACGATAAAGAGAGAATCACAAAAGAAGATCTCAATAAAGTTCCTTTCTTGAACTTGGTGA 1078
Query 1093 TCAAGGAAACATTCAGATTACACCCAGTAGCTCCTCTTCTGCTCCCAAGGGAAACAATGA 1152
|||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 1079 TCAAGGAAACATTCAGATTACATCCAGTAGCTCCTCTTCTACTCCCAAGAGAAACAATGG 1138
Query 1153 CTCACATCAAGGTTCAAGGCTATGATATTCCTCCAAAGAGACGGATCTTAGTCAACACTT 1212
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1139 CTCACATCAAGGTTCAAGGCTATGATATTCCTCCAAAGAGACGGATCTTAGTAAACACTT 1198
Query 1213 GGGCGATAGGAAGAGATCCTACACTCTGGATAAATCCGGAAGAGTTTAACCCCGAGAGGT 1272
|||| |||||||||||||| | |||||||| ||| |||||||||||||||||||||||||
Sbjct 1199 GGGCAATAGGAAGAGATCCGAAACTCTGGAAAAACCCGGAAGAGTTTAACCCCGAGAGGT 1258
Query 1273 TTATCAACAACCCTGTAGATTATAGAGGACAACATTTCGAGCTCTTACCGTTCGGGTCTG 1332
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1259 TTATCAACAACCCTGTGGATTATAGAGGACAACATTTCGAGCTCTTACCGTTCGGGTCCG 1318
Query 1333 GTCGAAGGATATGTCCCGGGATGGGGTTGGGGATCACTATAGTGGAATTGGGACTCTTGA 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 GTCGAAGGATATGTCCCGGGATGGGGTTGGGGATCACTATAGTGGAATTGGGACTCTTGA 1378
Query 1393 ACTTACTATACTTCTTCGATTGGAGAGCACCTGATGGGATGACACATAAAGACATCGATA 1452
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1379 ACTTACTTTACTTCTTCGATTGGAGAGCACCAGATGGGATGACACATAAAGACATCGATA 1438
Query 1453 CAGAAGAAGCTGGTA-TACTTACAGTAGTCAAGAAAGTACCTCTCAAACTTGTCCCAGTT 1511
||||||| || || | |||||||| |||||||||||||||||||| ||||||||||||
Sbjct 1439 CAGAAGATTTTGCTACT-CTTACAGTCGTCAAGAAAGTACCTCTCAAGCTTGTCCCAGTT 1497
Query 1512 CGAGTTCAGTGA 1523
| ||| ||||||
Sbjct 1498 CAAGTCCAGTGA 1509
> Ahg896477 jgi|Araly1|896477|Al_scaffold_0005_443
Length=1509
Score = 1906 bits (1032), Expect = 0.0
Identities = 1357/1514 (90%), Gaps = 22/1514 (1%)
Strand=Plus/Plus
Query 21 ATCTCTTTACTCTGTCTTTTTCTCATCACCTTAGTTTCGTTAATCTTTGTCGTCAAGAAG 80
|||||||| |||||| ||||||||||||| |||||||||||||| ||| ||| |||||||
Sbjct 7 ATCTCTTTGCTCTGTGTTTTTCTCATCACTTTAGTTTCGTTAATTTTTTTCGGCAAGAAG 66
Query 81 ATCAAACACT-CTAAATGGGATCTTCCTCCAAGCCCTCCTACGTTTCCGGTTATCGGAAA 139
| ||||| || | |||||| ||||||| ||||||||||||| ||||||||| || |||||
Sbjct 67 ACCAAACGCTGC-AAATGGAATCTTCCACCAAGCCCTCCTAAGTTTCCGGTCATAGGAAA 125
Query 140 CTTACACCAAGTTGGAGAATTGCCTCACAGGTCATTTCAACGTCTAGCCGAAAGAACCGG 199
|||||| ||| ||||||||||||||||||| ||| |||||||||| |||| |||||||||
Sbjct 126 CTTACATCAACTTGGAGAATTGCCTCACAGATCACTTCAACGTCTCGCCGCAAGAACCGG 185
Query 200 GCATGTTATGCTTCTTCACTTTGGGTTTGTCCCTGTAACTGTAATCTCATCGAGGGAAGC 259
||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||
Sbjct 186 ACATGTGATGCTTCTTCACTTAGGGTTTGTCCCTGTAACTGTGATCTCATCGAAAGAAGC 245
Query 260 AGCTGAAGAAGTTCTTAGAACTCATGACCTAAAGTGTTGCACCAGGCCTAAACTTGTCGG 319
|||||||||||| |||||||||||||||||| | ||||||| ||||||||| ||| ||||
Sbjct 246 AGCTGAAGAAGTGCTTAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAACCTTCTCGG 305
Query 320 GTCGAGGCTAATCTCTCGGGGTTTTAAAGATATCAGTTTTACTCCATACGGTGAAGAGTG 379
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 306 GTCGAGGCTAATCTCTCGGGGTTTTAAAGATATCAATTTTACTCCATACGGTAAAGAGTG 365
Query 380 G-AGAGAGCGGCGTAAGTTCTTGGTGCGCGAGCTTTTCTGTTTC-AAAAAGGTTCAGTAT 437
| || ||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||| |
Sbjct 366 GAAG-GAGCGACGTAAGTTCTTGGTGCGCGAGCTTTTCTG-TTCTAAAAAGGTTGAGTCT 423
Query 438 TTTGGGTATATCGTAGAAGAAGAATGTAACTTGCTGGTCAAGAAACTGACGGAATCAGCC 497
||||| |||||| |||||||||||||||||| |||||||||||| || | ||||| ||
Sbjct 424 TTTGGATATATCAAAGAAGAAGAATGTAACTTTCTGGTCAAGAAATTGTCAGAATCGGCA 483
Query 498 GTAGG-TCGGCCTCCGGTTGATTTGAGTAAATCCCTTTTCTG-GCTAGCTGCGAGTATCC 555
|| || || | ||||||| |||||||| ||| |||||||| | |||||||||||| ||||
Sbjct 484 GT-GGATCAGTCTCCGGTCGATTTGAGCAAAACCCTTTTC-GAGCTAGCTGCGAGGATCC 541
Query 556 TGTTTAGAATTGCTTTTGGACAGAGTTTCCACGACAACAAGTTTATCGATGAAGACAAGA 615
|||||||| || |||||||||||||||||||||| | |||||||| || |||||||||
Sbjct 542 TGTTTAGAGTTTCTTTTGGACAGAGTTTCCACGAGATTGAGTTTATCAATAAAGACAAGA 601
Query 616 TCGATGAACTTATATTTGAAACCGAGACAGCTCAGGCTAGTTTCACTTGCTCTGATTTCT 675
||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct 602 TCGATGAACTTGTATTTGAAATAGAGACAGCTCAGGCTAGTTTCACTTACTCTGATTTCT 661
Query 676 TCCCTATCGCCGGCCTTGGATGGCTCGCTGACTGGATTTCCGGGAAACACAGGTGGCTCA 735
||||||||||||| ||||||||||| | |||||||||||||||| |||||| | ||||||
Sbjct 662 TCCCTATCGCCGGACTTGGATGGCTTGTTGACTGGATTTCCGGGCAACACAAGAGGCTCA 721
Query 736 ACAATGTC-TTCTTCAAGCTCGATGCTCTGTTTCAACGTGTGATTGATGATCATTCAGAT 794
| ||| | ||| | ||||||||||||||| |||| | |||||| |||||||||||||||
Sbjct 722 ATGATG-CTTTCCTAAAGCTCGATGCTCTGCTTCAGCATGTGATCGATGATCATTCAGAT 780
Query 795 CCTGGAAGATGGAAAGATCACAAAGATATCGTCGATGTAATGTTGGATGTGATGCATAAA 854
|||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 781 CCTGGAAGATCGAAAGATCACAAAGATATCGTCGATGTAATGTTGGATATGATGCATAAA 840
Query 855 CAAGGCAAAGATGATTCTTTGAGGCTCACAATAGATCATATTAAGGGGTTTCTCACGAAT 914
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 841 CAAGGCAAAGATGATTCTTTGAGGCTCACAATAGATCATATTAAGGCGCTTCTCACGAAT 900
Query 915 ATAATAATCGCAGGGATAGACACAGGAGCTCTTACCATGATATGGGCAATGACAGAGCTC 974
||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 901 ATAATAATCGCAGGGATAGACACAGGAGCTCTTACCATGATATGGACAATGACGGAGCTC 960
Query 975 GCAAGAAACCCCGAACTAATGAAGAACGTTCAAGGCGAGATTAGAGAC-AGCTTTGGCAA 1033
|| ||||| || ||| |||||||||| |||||| |||| || ||||| | |||||||||
Sbjct 961 GCTAGAAATCCGGAAGTAATGAAGAAAGTTCAATGCGAAATCCGAGACCA-CTTTGGCAA 1019
Query 1034 CAATAAGGAGAGAATCACCAAAGAAGATCTAAATAAAGTTCCTTTCTTAAACATGGTGAT 1093
|||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||
Sbjct 1020 CAATAAGGAGAGAATCACCAAAGAAGATCTTGATAAAGTTCCTTTCTTGAACTTGGTGAT 1079
Query 1094 CAAGGAAACATTCAGATTACACCCAGTAGCTCCTCTTCTGCTCCCAAGGGAAACAATGAC 1153
||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||| |
Sbjct 1080 CAAGGAATCATTCAGATTATACCCAGTAGCTCCTCTTCTGCTACCAAGGGAAACAATGGC 1139
Query 1154 TCACATCAAGGTTCAAGGCTATGATATTCCTCCAAAGAGACGGATCTTAGTCAACACTTG 1213
|||| |||||||||||||||||||||||||||| ||||| |||||||| ||||| |||
Sbjct 1140 TCACGTCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGGCGGATCTTGGTCAATGTTTG 1199
Query 1214 GGCGATAGGAAGAGATCCTACACTCTGGATAAATCCGGAAGAGTTTAACCCCGAGAGGTT 1273
|||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||
Sbjct 1200 GGCGATAGGAAGAGATCCGAAACTCTGGAAAAACCCGGAAGAGTTTAACCCCGAGAGGTT 1259
Query 1274 TATCAACAACCCTGTAGATTATAGAGGACAACATTTCGAGCTCTTACCGTTCGGGTCTGG 1333
|||| | | ||| || |||| |||||| |||||||||||||| |||||||| ||||||||
Sbjct 1260 TATCGATAGCCCCGTGGATTTTAGAGGGCAACATTTCGAGCTTTTACCGTTTGGGTCTGG 1319
Query 1334 TCGAAGGATATGTCCCGGGATGGGGTTGGGGATCACTA-TAGTGGAATTGGGACTCTTGA 1392
|||||||||||||||||||||| | ||||||| ||| | ||||||||||||||||||
Sbjct 1320 ACGAAGGATATGTCCCGGGATGGAGATGGGGATGGCTACTC-TGGAATTGGGACTCTTGA 1378
Query 1393 ACTTACTATACTTCTTCGATTGGAGAGCA-CCTGATGGGATGACACATAAAGACATCGAT 1451
||||||| |||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct 1379 ACTTACTTTACTTCTTCGATTGGA-AGTTGCCTGATGGGATGACACATAAAGATATCGAT 1437
Query 1452 ACAGAAGAAGCTGGTA-TACTTACAGTAGTCAAGAAAGTACCTCTCAAA-CTTGTCCCAG 1509
|| ||||||||||||| | |||||||| || |||||| ||||||| ||| ||||| ||||
Sbjct 1438 ACTGAAGAAGCTGGTACT-CTTACAGTCGTTAAGAAAATACCTCT-AAAGCTTGTTCCAG 1495
Query 1510 TTCGAGTTCAGTGA 1523
||||||||||||||
Sbjct 1496 TTCGAGTTCAGTGA 1509
> Ahg484384 jgi|Araly1|484384|fgenesh2_kg.5__376__AT3G26170.1
Length=1644
Score = 1500 bits (812), Expect = 0.0
Identities = 1304/1537 (85%), Gaps = 52/1537 (3%)
Strand=Plus/Plus
Query 13 AAATGGCAATCTCTTTACTCTGTCTTTT-TCTCATCACCTTAGTTTCGTTAATCTTTGTC 71
||||||| || ||||| |||||| |||| ||| | ||| | |||||||| |||||| ||
Sbjct 8 AAATGGCGATATCTTTCCTCTGT-TTTTGCCTCGTTACCCTCGTTTCGTTCATCTTTTTC 66
Query 72 GTCAAGAAGATCAAAC-ACTCTAAATGGGATCTTCCTCCAAGCCCTCCTACGTTTCCGGT 130
| |||||||||||||| | ||||||||| ||||||||||||||||||| | |||||||||
Sbjct 67 GCCAAGAAGATCAAACGA-TCTAAATGGAATCTTCCTCCAAGCCCTCCCAAGTTTCCGGT 125
Query 131 TATCGGAAACTTACACCAAG-TTGGAGAATTGCCTCACAGGTCATTTCAACGTCTAGCCG 189
|||||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||
Sbjct 126 CATCGGAAACTTACACC-AGATTGGAGAATTGCCTCACTGGTCACTTCAACGTCTAGCCG 184
Query 190 AAAGA-ACCGGGCATGTTATGCTTCTTCACTTTGGGTTTGTCCCTGTAACTGTAATCTCA 248
||||| | ||| | ||| ||||||||||||||||||||||||||| ||||||| |||||
Sbjct 185 AAAGATA-CGGACCTGTGATGCTTCTTCACTTTGGGTTTGTCCCTATAACTGTGGTCTCA 243
Query 249 TCGAGGGAAGCAGCTGAAGAAGTTCTTAGAACTCATGACCTAAAGTGTTGCACCAGGCCT 308
||||| ||||||||||||||||| || ||||||||||||||| | ||||||| |||||||
Sbjct 244 TCGAGAGAAGCAGCTGAAGAAGTGCTCAGAACTCATGACCTAGACTGTTGCAGCAGGCCT 303
Query 309 AAACTTGTCGGGTCGAGGCTAATCTCTCGGGGTTTTAAAGATATCAGTTTTACTCCATAC 368
|| ||||||||| ||||| || | || |||| |||||||||||| ||||||| ||||||
Sbjct 304 AAGCTTGTCGGGACGAGGTTACTTTCGCGGGATTTTAAAGATATTGGTTTTACGCCATAC 363
Query 369 GGTGAAGAGTGG-AGAGAGCGGCGTAAGTTCTTG-G-TGCGCGAGCTTTTCTGTTTCAAA 425
||| |||||||| || |||||||||||| | ||| | |||| ||||||||||| || ||
Sbjct 364 GGTAAAGAGTGGAAG-GAGCGGCGTAAG-T-TTGCGCTGCGTGAGCTTTTCTGCTTGAAT 420
Query 426 AAGGTTCAGTATTTTGGGTATA-TCGTAGAAGAAGAATGTAACTTGCTGGTCAAGAAACT 484
||||||| || |||| || ||| | | ||| |||||||||||||| ||||||||||||||
Sbjct 421 AAGGTTCGGTCTTTTAGGCATATTAG-AGAGGAAGAATGTAACTTTCTGGTCAAGAAACT 479
Query 485 GACGGAATCAGCCGTAGG-TCGGC-CTCCGGTTGATTTGAGTAAATCCCTTTTCTGGCTA 542
| ||||||| || || || || || ||||||| |||||||| ||||| ||||||||||||
Sbjct 480 GTCGGAATCCGCGGT-GGATC-GCTCTCCGGTCGATTTGAGCAAATCACTTTTCTGGCTA 537
Query 543 GCTGCGAGTATCCTGTTTAGAATTGCTTTTGGACAGAGTTTCCACGACAACAAGTTTATC 602
| || |||||||| |||||| |||| || ||||||| ||||||||| | ||| ||||||
Sbjct 538 ACCGCAAGTATCCTTTTTAGAGTTGCCTTAGGACAGAATTTCCACGAGAGCAATTTTATC 597
Query 603 GATGAAGACAAG-ATCGATGAACTTATATTTGAAACCGAGACAGCTC-AGGCTAGTTTCA 660
||| ||||| || ||||| || || | || ||| | ||||| || | | ||||||||||
Sbjct 598 GATAAAGAC-AGTATCGAAGAGCTCGTGTTCGAAGCTGAGACTGCCCTA-GCTAGTTTCA 655
Query 661 CTTGCTCTGATTTCTTCCCTATCGCCGGCCTTGGATGGCTCGCTGACTGGATTTCCGGGA 720
|||||||||||||||||||| | ||||| ||||||||||||| ||||||| | ||||| |
Sbjct 656 CTTGCTCTGATTTCTTCCCTGTTGCCGGACTTGGATGGCTCGTTGACTGGCTCTCCGG-A 714
Query 721 -AACACAGGTGGCTCAACAATGTCTTCTT-CAAGCTCGATGCTCTGTTTCAACGTGTGAT 778
|||||| |||||||| |||| || || |||||| |||||||||||||||| ||||||
Sbjct 715 CAACACAAAAGGCTCAACGATGT-TTATTTCAAGCTTGATGCTCTGTTTCAACATGTGAT 773
Query 779 TGATGATCATTC-AGATCCTGGAAGATGGAAAGATCACAAAGATATCGTCGATGT-AATG 836
|||||||||| | | |||||||||| ||||||||| |||| ||| | ||| | ||||
Sbjct 774 CGATGATCATTTGAAA-CCTGGAAGATCCAAAGATCACGAAGACATCATTGAT-TCAATG 831
Query 837 TTGGATGTGATGCATAAACAAGGCAAAGAT-GATTCTTT-GAGGCTCACAATAGATCATA 894
||||||||||| |||||| |||| |||||| | ||| || ||| ||||||||||||||||
Sbjct 832 TTGGATGTGATTCATAAAGAAGGAAAAGATAG-TTCCTTAGAG-CTCACAATAGATCATA 889
Query 895 TTAAGGGGTTTCTCACGAATATAATAATCGCAGGGATAGACACAGGAGCTCTT-ACCATG 953
| |||||||||||| |||||||| | | ||||||||||||||||| || | | ||||||
Sbjct 890 TCAAGGGGTTTCTCGCGAATATATTTCTTGCAGGGATAGACACAGGGGC-CATCACCATG 948
Query 954 ATATGGGCAATGACAGAGCTCGC-AAGAAACCCCGAA-CTAATGAAGAACGTTCAAGGCG 1011
|||||||||||||| ||||||| || |||||| ||| || || ||||| |||||||| |
Sbjct 949 ATATGGGCAATGACGGAGCTCGTTAA-AAACCC-GAAACTGATAAAGAAAGTTCAAGGTG 1006
Query 1012 AGATTAGAGA-CAGCTTTGGCAACAATAAGGAGAGAATCACCAAAGAAGATCTAAATAAA 1070
|||| |||| || ||| |||| ||||||||||||||||||| | |||||| | |||||
Sbjct 1007 AGATCCGAGAACAACTT-GGCAGCAATAAGGAGAGAATCACCGAGGAAGATGTCGATAAA 1065
Query 1071 GTTCCTTTCTTAAACATGGTGATCAAGGAAACATTCAGATTACACCCAGTAGCTCCTCTT 1130
||||||| ||| || ||||| ||||| ||||||||||| |||||||||| ||||||||||
Sbjct 1066 GTTCCTTACTTGAAGATGGTAATCAAAGAAACATTCAGGTTACACCCAGCAGCTCCTCTT 1125
Query 1131 CTGCTCCCAAGGGAAACAATGACTCACATCAAGGTTCAAGGCTATGATATTCCTCCAAAG 1190
| |||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||
Sbjct 1126 ATACTCCCAAGGGAAACAATGGCTCACATCAAAGTTCAAGGCTATGATATTCCTCCCAAG 1185
Query 1191 AGACGGATCTTAGTCAACACTTGGGCGATAGGAAGAGATCCTACACTCTGGATAAATCCG 1250
|| |||||||| |||||| || ||| |||||||||||||| | |||||||| ||| |||
Sbjct 1186 AGGCGGATCTTGGTCAACGTTTTGGCAATAGGAAGAGATCCCAAACTCTGGACAAACCCG 1245
Query 1251 GAAGAGTTTAACCCCGAGAGGTTTATCA-ACAACCCTGTAGATTATAGAGGACAACATTT 1309
|||||||||||||| || |||||||| | | | | |||| ||||| |||||||||||||
Sbjct 1246 GAAGAGTTTAACCCTGACAGGTTTAT-AGATAGCTCTGTGGATTACAGAGGACAACATTA 1304
Query 1310 CGAGCTCTTACCGTTCGGGTCTGGTCGAAGGATATGTCCCGGGATGGGGTTGGGGATCAC 1369
|||||||||||| || ||||| ||||||||||| |||||||||||| ||||||| |
Sbjct 1305 CGAGCTCTTACCATTTGGGTCCGGTCGAAGGATGTGTCCCGGGATGCCAATGGGGATTGC 1364
Query 1370 TATAGTGGAATTGGGACTCTTGAACTTACTATACTTCTTCGATTGGAGAGC-ACCTGATG 1428
|| || ||||| ||||||||||||||||| |||||||||||||||| || ||||||||
Sbjct 1365 TACCGTCGAATTAGGACTCTTGAACTTACTTTACTTCTTCGATTGGA-AGTTACCTGATG 1423
Query 1429 GGATGACACATAAAGACATCGATACAGAAGAAGCTGGTA-TACTTACAGTAGTCAAGAAA 1487
|||||||||||||||| |||||||| ||||||||||||| | |||||| | |||||||||
Sbjct 1424 GGATGACACATAAAGATATCGATACTGAAGAAGCTGGTACT-CTTACAATCGTCAAGAAA 1482
Query 1488 GTACCTCTCAA-ACTTGTCCCAGTTCGAGTTCAGTGA 1523
|| ||||| || | |||| ||||||||||||||||||
Sbjct 1483 GTTCCTCTAAAGA-TTGTTCCAGTTCGAGTTCAGTGA 1518
> Ahg896478 jgi|Araly1|896478|Al_scaffold_0005_444
Length=1260
Score = 1022 bits (553), Expect = 0.0
Identities = 794/909 (87%), Gaps = 21/909 (2%)
Strand=Plus/Plus
Query 15 ATGGCAATCTCTTTACTCTGTCTTTTTCTCATCACCTTAGTTTCGTTAAT-CTT-TGTCG 72
|||||||||||||| |||||||| |||||||| |||| | |||||||| ||| | | |
Sbjct 1 ATGGCAATCTCTTTGTTCTGTCTTCTTCTCATCGCCTTTGCGTCGTTAATCCTTCT-TGG 59
Query 73 TCAAGAAGATCAAACACTCTAAATGGGATCTTCCTCCAAGCCCTCCTACGTTTCCGGTTA 132
| ||||||||||||| |||||||||| ||||||||||||||||||| | |||||| || |
Sbjct 60 T-AAGAAGATCAAACGCTCTAAATGGAATCTTCCTCCAAGCCCTCCAAAGTTTCCAGTCA 118
Query 133 TCGGAAACTTACACCAAGTTGGAGAATTGCCTCACAGGTCATTTCAACGTCTAGCCGAAA 192
||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 119 TCGGAAACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAA 178
Query 193 GAACCGGGCATGTTATGCTTCTTCACTTTGGGTTTGTCCCTGTAACTGTAATCTCATCGA 252
||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 179 GAACCGGACATGTTATGCTTCTTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGA 238
Query 253 GGGAAGCAGCTGAAGAAGTTCTTAGAACTCATGACCTAAAGTGTTGCACCAGGCCTAAAC 312
||||||||||||||||| |||||||||||||||||| | ||||||| ||||||||| |
Sbjct 239 AAGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAAGC 298
Query 313 TTGTCGGGTCGAGGCTAATCTCTCGGGGTTTTAAAGATATCAGTTTTACTCCATACGGTG 372
|||| ||| |||||||||| |||||||||||||||||| || ||||||| ||||||||||
Sbjct 299 TTGTTGGGACGAGGCTAATTTCTCGGGGTTTTAAAGATGTCGGTTTTACCCCATACGGTG 358
Query 373 AAGAGTGG-AGAGAGCGGCGTAAGTTCTTGGTGCGCGAGCTTTTCTGTTTCAAAAAGGTT 431
|||||||| || |||||||| |||||||||||||| ||| |||||||||| || ||||||
Sbjct 359 AAGAGTGGAAG-GAGCGGCGCAAGTTCTTGGTGCGTGAGTTTTTCTGTTTGAAGAAGGTT 417
Query 432 CAGTATTTTGGGTATATC-GTAGAAGAAGAATGTAACTTGCTGGTCAAGAAACTGACGGA 490
|||| ||| ||||||||| | ||| |||||||||||||| || |||||||||||| ||||
Sbjct 418 CAGTCTTTCGGGTATATCAG-AGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTCGGA 476
Query 491 ATCAGCCGTAGG-TCGGCCTCCGGTTGATTTGAGTAAATCCCTTTTCTGGCTAGCTGCGA 549
|||||| || || ||| |||| || ||| |||| ||| |||||||||||||| | || |
Sbjct 477 ATCAGCAGT-GGATCGAACTCCAGTCGATATGAGCAAAACCCTTTTCTGGCTAACCGCCA 535
Query 550 GTATCCTGTTTAGAATTGCTTTTGGACAGAGTTTCCACGACAACAAGTTTATCGATGAAG 609
|||||||||||||| |||||| |||||||||||||||||| | |||||||||||| |||
Sbjct 536 GTATCCTGTTTAGAGTTGCTTCTGGACAGAGTTTCCACGAGAGTAAGTTTATCGATAAAG 595
Query 610 ACAAGATCGATGAACTTATATTTGAAACCGAGACAGCTCAGGCTAGTTTCACTTGCTCTG 669
||||| ||||||| ||| | |||||| |||||||||||||||||||||||||||||||||
Sbjct 596 ACAAGGTCGATGAGCTTGTGTTTGAAGCCGAGACAGCTCAGGCTAGTTTCACTTGCTCTG 655
Query 670 ATTTCTTCCCTATCGCCGGCCTTGGATGGCTCGCTGACTGGATTTCCGGGAAACACAGGT 729
|||||||||| || ||||| ||||||||| ||| |||||| ||||||||| |||||| |
Sbjct 656 ATTTCTTCCCCATTGCCGGACTTGGATGGATCGTTGACTGTATTTCCGGGCAACACAAGA 715
Query 730 GGCTCAACA-ATGTCTTCTTCAAGCTCGATGCTCTGTTTCAACGTGTGATTGATGATCAT 788
||||||| | |||| ||||||||||| ||||||||||||||| ||||||| |||||||||
Sbjct 716 GGCTCAA-AGATGTTTTCTTCAAGCTGGATGCTCTGTTTCAAGGTGTGATCGATGATCAT 774
Query 789 TCAGATCCTGG-A-A-GATG-GAAAGATCACAAAGATATCGTCGATGTAATGTTGGATGT 844
| | |||| || | | ||| ||| ||||||| |||||| |||||| |||||||||||||
Sbjct 775 TTACATCCGGGCAGAAGATCTGAA-GATCACAGAGATATTGTCGATATAATGTTGGATGT 833
Query 845 GATGCATAAACAAGGCAAAGATGATT-CTTTGAGGCTCACAAT-AGATCATATTAAGGGG 902
|||||||||||||||||||||| ||| | |||| ||||||||| | || | || |||||
Sbjct 834 GATGCATAAACAAGGCAAAGAT-ATTTCCTTGAAGCTCACAATCA-ATAACATCAAGGGA 891
Query 903 TTTCTCACG 911
|||| |||
Sbjct 892 ATTCTAACG 900
Score = 435 bits (235), Expect = 6e-121
Identities = 323/365 (88%), Gaps = 8/365 (2%)
Strand=Plus/Plus
Query 1163 GGTTCAAGGCTATGATATTCCTCCAAAGAGACGGATCTTAGTCAACACTTGGGCGATAGG 1222
||||||||||||| |||||||||| |||| ||||||||| ||||| |||||||||||||
Sbjct 900 GGTTCAAGGCTATAATATTCCTCCGAAGACACGGATCTTGGTCAATGCTTGGGCGATAGG 959
Query 1223 AAGAGATCCTACACTCTGGATAAATCCGGAAGAGTTTAACCCCGAGAGGTTTATCAACAA 1282
||||||||||| | | |||| ||| |||||||||||||||||||||||||||||||| |
Sbjct 960 AAGAGATCCTAAAGTTTGGACAAACCCGGAAGAGTTTAACCCCGAGAGGTTTATCAATAG 1019
Query 1283 CCCTGTAGATTATAGAGGACAACATTTCGAGCTCTTACCGTTCGGGTCTGGTCGAAGGAT 1342
|||| | ||||| || ||||||||||| ||||| ||||||||||| |||||||||||| |
Sbjct 1020 CCCTTTGGATTACAGTGGACAACATTTTGAGCTATTACCGTTCGGCTCTGGTCGAAGGGT 1079
Query 1343 ATGTCCCGGGATGGGGTTGGGGATCACTA-TAGTGGAATTGGGACTCTTGAACTTACTAT 1401
|||||||||||||| | ||||||| ||| | |||||||||||||||||||||||||| |
Sbjct 1080 ATGTCCCGGGATGGCGATGGGGATGGCTACT-GTGGAATTGGGACTCTTGAACTTACTTT 1138
Query 1402 ACTTCTTCGATTGGAGAGCA-CCTGATGGGATGACACATAAAGACATCGATACAGAAGAA 1460
||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||||
Sbjct 1139 ACTTCTTCGATTGGA-AGTTGCCTGATGGGATGACACATAAAGATATCGATACTGAAGAA 1197
Query 1461 GCTGGTA-TACTTACAGTAGTCAAGAAAGTACCTCTCAAA-CTTGTCCCAGTTCGAGTTC 1518
||||||| | |||||| | ||||||||||| ||||| ||| ||||| |||||||||||||
Sbjct 1198 GCTGGTACT-CTTACAATCGTCAAGAAAGTTCCTCT-AAAGCTTGTTCCAGTTCGAGTTC 1255
Query 1519 AGTGA 1523
|||||
Sbjct 1256 AGTGA 1260
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57021096765
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5