BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G26165.1
Length=1424
Score E
Sequences producing significant alignments: (Bits) Value
Ahg896478 jgi|Araly1|896478|Al_scaffold_0005_444 1131 0.0
Ahg322757 jgi|Araly1|322757|fgenesh1_pm.C_scaffold_5000301 926 0.0
Ahg896477 jgi|Araly1|896477|Al_scaffold_0005_443 876 0.0
Ahg484384 jgi|Araly1|484384|fgenesh2_kg.5__376__AT3G26170.1 821 0.0
> Ahg896478 jgi|Araly1|896478|Al_scaffold_0005_444
Length=1260
Score = 1131 bits (612), Expect = 0.0
Identities = 711/759 (94%), Gaps = 5/759 (1%)
Strand=Plus/Plus
Query 1 ATGGCAATCTCTTTACTCTTGTCTTTTTCTCATCGCCTTTGCTTCGTTAAT-CTTCCTCG 59
|||||||||||||| || |||||| |||||||||||||||| |||||||| ||| || |
Sbjct 1 ATGGCAATCTCTTTGTTC-TGTCTTCTTCTCATCGCCTTTGCGTCGTTAATCCTT-CTTG 58
Query 60 GAAAAAAGATCAAACGATCTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCA 119
| || ||||||||||| |||||||||||| ||||||| |||||||| |||||||| ||||
Sbjct 59 GTAAGAAGATCAAACGCTCTAAATGGAATCTTCCTCCAAGCCCTCCAAAGTTTCCAGTCA 118
Query 120 TCGGAAACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAA 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 TCGGAAACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAA 178
Query 180 AAACCGGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGA 239
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 179 GAACCGGACATGTTATGCTTCTTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGA 238
Query 240 AAGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAATC 299
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 239 AAGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAAGC 298
Query 300 TTGTTGGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGGTG 359
||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||
Sbjct 299 TTGTTGGGACGAGGCTAATTTCTCGGGGTTTTAAAGATGTCGGTTTTACCCCATACGGTG 358
Query 360 AAGAGTGGAAGGAGCGGCGTAAGTTCTTGGTGCGTGAGTTTTTCTCTTTGAAAAAGGTTC 419
||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct 359 AAGAGTGGAAGGAGCGGCGCAAGTTCTTGGTGCGTGAGTTTTTCTGTTTGAAGAAGGTTC 418
Query 420 AGTCTTTCGGTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTTGGAAT 479
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 419 AGTCTTTCGGGTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTCGGAAT 478
Query 480 CAGCCGTGGATC-AATCTCCGGTTGATTTGAGCAAAACCCTTTTTTGGCTAACCGCGAGT 538
|||| ||||||| || |||| || ||| |||||||||||||||| ||||||||||| |||
Sbjct 479 CAGCAGTGGATCGAA-CTCCAGTCGATATGAGCAAAACCCTTTTCTGGCTAACCGCCAGT 537
Query 539 GTCATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATAAAGAC 598
|| ||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||
Sbjct 538 ATCCTGTTTAGAGTTGCTTCTGGACAGAGTTTCCACGAGAGTAAGTTTATCGATAAAGAC 597
Query 599 AAGGTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGCTCTGAT 658
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 598 AAGGTCGATGAGCTTGTGTTTGAAGCCGAGACAGCTCAGGCTAGTTTCACTTGCTCTGAT 657
Query 659 TTCTTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACACAAGAGG 718
|||||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 658 TTCTTCCCCATTGCCGGACTTGGATGGATCGTTGACTGTATTTCCGGGCAACACAAGAGG 717
Query 719 CTCAAAGATGTTTTCTTCAAGCTGGATGCTCTGTTTCAA 757
|||||||||||||||||||||||||||||||||||||||
Sbjct 718 CTCAAAGATGTTTTCTTCAAGCTGGATGCTCTGTTTCAA 756
Score = 496 bits (268), Expect = 3e-139
Identities = 330/361 (91%), Gaps = 0/361 (0%)
Strand=Plus/Plus
Query 1033 GGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACGCTTGGGCGATAGG 1092
||||||||||||| |||||||||| |||| ||||||||||||||| ||||||||||||||
Sbjct 900 GGTTCAAGGCTATAATATTCCTCCGAAGACACGGATCTTGGTCAATGCTTGGGCGATAGG 959
Query 1093 AAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGAGATTTATCAATAG 1152
||||||||| ||| | ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 960 AAGAGATCCTAAAGTTTGGACAAACCCGGAAGAGTTTAACCCCGAGAGGTTTATCAATAG 1019
Query 1153 TCCTGTGGATTATAGGGGACAACATTTCGAGCTCTTACCGTTTGGGTCTGGACGAAGGAT 1212
||| ||||||| || ||||||||||| ||||| |||||||| || ||||| |||||| |
Sbjct 1020 CCCTTTGGATTACAGTGGACAACATTTTGAGCTATTACCGTTCGGCTCTGGTCGAAGGGT 1079
Query 1213 ATGTCCCGGGATATCGATGGGTATGGCTACTGTAGAATTGGGACTCTTGAACTTACTTTA 1272
|||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1080 ATGTCCCGGGATGGCGATGGGGATGGCTACTGTGGAATTGGGACTCTTGAACTTACTTTA 1139
Query 1273 CTTCTTCGACTGGAAGTTGCCTGATGGGATGACACATAAAGATATCGATACTGAAGAAGT 1332
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 CTTCTTCGATTGGAAGTTGCCTGATGGGATGACACATAAAGATATCGATACTGAAGAAGC 1199
Query 1333 TGGCACTCTTACAATCGTCAAGAAAGTACCACTAAAACTTCTTCCAGTTCGATTTCAGTG 1392
||| ||||||||||||||||||||||| || ||||| ||| ||||||||||| |||||||
Sbjct 1200 TGGTACTCTTACAATCGTCAAGAAAGTTCCTCTAAAGCTTGTTCCAGTTCGAGTTCAGTG 1259
Query 1393 A 1393
|
Sbjct 1260 A 1260
> Ahg322757 jgi|Araly1|322757|fgenesh1_pm.C_scaffold_5000301
Length=1509
Score = 926 bits (501), Expect = 0.0
Identities = 676/761 (89%), Gaps = 9/761 (1%)
Strand=Plus/Plus
Query 1 ATGGCAATCTCTTTACTCTTGTCTTTTTCTCATCGCCTTTGCTTCGTTAATCTTCCTCGG 60
|||||||||||||||||| ||||||||||||||| |||| | |||||||||||| ||
Sbjct 1 ATGGCAATCTCTTTACTC-TGTCTTTTTCTCATCACCTTCGTTTCGTTAATCTTTGTCTT 59
Query 61 AAAAAAGATCAAACGATCTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCAT 120
|| ||||||||||| | |||||||||| ||||||| || ||||||| ||||||||||||
Sbjct 60 CAAGAAGATCAAACGCTTTAAATGGAATCTTCCTCCAAGTCCTCCTACGTTTCCGGTCAT 119
Query 121 CGGAAACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAAA 180
|||||||||||| ||| |||||||||||||||| |||||| ||||||||||||||||||
Sbjct 120 CGGAAACTTACACCAAGTTGGAGAATTGCCTCATAGGTCATTTCAACGTCTAGCCGAAAG 179
Query 181 AACCGGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGAA 240
||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 180 AACCGGACATGTTATGCTTCTTCACTTTGGGTTTGTCCCTGTAACTGTTATCTCATCGAG 239
Query 241 AGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAATCT 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 240 GGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAAGTGTTGCAGCAGGCCTAAGCT 299
Query 301 TGTTGGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGGTGA 360
||| |||||||||||| | |||||||||||||||||| | |||||||||||||||||||
Sbjct 300 TGTCGGGACGAGGCTAATCTCTCGGGGTTTTAAAGATATCAGTTTTACTCCATACGGTGA 359
Query 361 AGAGTGGAAGGAGCGGCGTAAGTTCTTGGTGCGTGAGTTTTTCTCTTTGAAAAAGGTTCA 420
|||||||| |||||||||||||||||||||||| ||| |||||| ||| |||||||||||
Sbjct 360 AGAGTGGAGGGAGCGGCGTAAGTTCTTGGTGCGAGAGCTTTTCTGTTTTAAAAAGGTTCA 419
Query 421 GTCTTT-CG-GTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTTGGAA 478
|||||| || | | ||| ||| ||||||||||||||||| ||||||||||||| ||||
Sbjct 420 GTCTTTTCGAGAG-T-TCATAGAAGAAGAATGTAACTTTCTGGTCAAGAAACTGTCGGAA 477
Query 479 TCAGCCGT-GGATCAATCTCCGGTTGATTTGAGCAAAACCCTTTTTTGGCTAACCGCGAG 537
||||| || || || |||||||||||||||||||||||||||| |||||| | |||||
Sbjct 478 TCAGCAGTAGG-TCGGGCTCCGGTTGATTTGAGCAAAACCCTTTTCTGGCTAGCTGCGAG 536
Query 538 TGTCATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATAAAGA 597
| || |||||||| ||||||||||||||||||||||||| | |||||| | |||||||||
Sbjct 537 TATCCTGTTTAGAATTGCTTTTGGACAGAGTTTCCACGACAACGAGTTTAACGATAAAGA 596
Query 598 CAAGGTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGCTCTGA 657
|||| ||||||| ||| | |||||| ||||||| ||||| ||||||||||||| ||||||
Sbjct 597 CAAGATCGATGAACTTATATTTGAAACCGAGACAGCTCAGGCTAGTTTCACTTACTCTGA 656
Query 658 TTTCTTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACACAAGAG 717
|||||||||||| || |||||||| ||||| |||||||| ||||||||| |||||||| |
Sbjct 657 TTTCTTCCCTATGGCCGGACTTGGATGGCTTGTTGACTGGATTTCCGGGAAACACAAGTG 716
Query 718 GCTCAA-AGATGTTTTCTTCAAGCTGGATGCTCTGTTTCAA 757
|||||| | |||| ||||||||||| |||||| ||||||||
Sbjct 717 GCTCAACA-ATGTCTTCTTCAAGCTCGATGCTTTGTTTCAA 756
Score = 743 bits (402), Expect = 0.0
Identities = 547/617 (89%), Gaps = 10/617 (2%)
Strand=Plus/Plus
Query 782 AATATATTTCTCGGAGGGATAGACACCGGAGCTCTTACTATGATATGGGCAATGACGGAG 841
|||||| || ||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 898 AATATAATTATCGCAGGGATAGACACAGGAGCTCTTACTATGATATGGGCAATGACGGAG 957
Query 842 CTCGCTAGAAACCCGGAAGTGATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGGC 901
||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 958 CTCGCAAGAAACCCGGAACTAATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGGC 1017
Query 902 AGA-AATAAAGAGAGAATCACCGAAGAAGATATCAATAAAGTTCCTTACTTGAACCTAGT 960
| | |||||||||||||||| |||||||| ||||||||||||||| ||||||| | ||
Sbjct 1018 A-ACGATAAAGAGAGAATCACAAAAGAAGATCTCAATAAAGTTCCTTTCTTGAACTTGGT 1076
Query 961 GATCAAGGAAACATTCAGATTACA-CCATCCAGTTCCTCTTCTTCTCCCAAGGGAAACAA 1019
|||||||||||||||||||||||| ||| || ||||||||| |||||||| |||||||
Sbjct 1077 GATCAAGGAAACATTCAGATTACATCCA-GTAGCTCCTCTTCTACTCCCAAGAGAAACAA 1135
Query 1020 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACG 1079
||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||
Sbjct 1136 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCAAAGAGACGGATCTTAGTAAACA 1195
Query 1080 CTTGGGCGATAGGAAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGA 1139
||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1196 CTTGGGCAATAGGAAGAGATCCGAAACTCTGGAAAAACCCGGAAGAGTTTAACCCCGAGA 1255
Query 1140 GATTTATCAATAGTCCTGTGGATTATAGGGGACAACATTTCGAGCTCTTACCGTTTGGGT 1199
| |||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 1256 GGTTTATCAACAACCCTGTGGATTATAGAGGACAACATTTCGAGCTCTTACCGTTCGGGT 1315
Query 1200 CTGGACGAAGGATATGTCCCGGGATATCGATGGGTATGGCTACT-GTAGAATTGGGACTC 1258
| || |||||||||||||||||||| | |||| || ||| | || ||||||||||||
Sbjct 1316 CCGGTCGAAGGATATGTCCCGGGATGGGGTTGGGGATCACTA-TAGTGGAATTGGGACTC 1374
Query 1259 TTGAACTTACTTTACTTCTTCGACTGGA-AGTTGCCTGATGGGATGACACATAAAGATAT 1317
||||||||||||||||||||||| |||| || || |||||||||||||||||||| ||
Sbjct 1375 TTGAACTTACTTTACTTCTTCGATTGGAGAGCA-CCAGATGGGATGACACATAAAGACAT 1433
Query 1318 CGATACTGAAGAAGTTGGC-ACTCTTACAATCGTCAAGAAAGTACCACTAAAACTTCTTC 1376
|||||| ||||| ||| | ||||||||| |||||||||||||||| || || ||| | |
Sbjct 1434 CGATACAGAAGATTTTG-CTACTCTTACAGTCGTCAAGAAAGTACCTCTCAAGCTTGTCC 1492
Query 1377 CAGTTCGATTTCAGTGA 1393
|||||| | | ||||||
Sbjct 1493 CAGTTCAAGTCCAGTGA 1509
> Ahg896477 jgi|Araly1|896477|Al_scaffold_0005_443
Length=1509
Score = 876 bits (474), Expect = 0.0
Identities = 680/779 (87%), Gaps = 16/779 (2%)
Strand=Plus/Plus
Query 7 ATCTCTTTACTCTTGTCTTTTTCTCATCGCCTTT-GCTTCGTTAATCTTCCTCGGAAAAA 65
|||||||| ||| ||| ||||||||||| |||| | ||||||||| || |||| || |
Sbjct 7 ATCTCTTTGCTC-TGTGTTTTTCTCATC-ACTTTAGTTTCGTTAATTTTTTTCGGCAAGA 64
Query 66 AGATCAAACGAT-CTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCATCGGA 124
||| |||||| | | ||||||||| |||| || ||||||||||||||||||||||| |||
Sbjct 65 AGACCAAACGCTGC-AAATGGAATCTTCCACCAAGCCCTCCTAAGTTTCCGGTCATAGGA 123
Query 125 AACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAAAAACC 184
|||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||||
Sbjct 124 AACTTACATCAACTTGGAGAATTGCCTCACAGATCACTTCAACGTCTCGCCGCAAGAACC 183
Query 185 GGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGAAAGAA 244
||| |||| |||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 184 GGACATGTGATGCTTCTTCACTTAGGGTTTGTCCCTGTAACTGTGATCTCATCGAAAGAA 243
Query 245 GCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAATCTTGTT 304
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |
Sbjct 244 GCAGCTGAAGAAGTGCTTAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAACCTTCTC 303
Query 305 GGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGGTGAAGAG 364
||| |||||||| | |||||||||||||||||| | |||||||||||||||| |||||
Sbjct 304 GGGTCGAGGCTAATCTCTCGGGGTTTTAAAGATATCAATTTTACTCCATACGGTAAAGAG 363
Query 365 TGGAAGGAGCGGCGTAAGTTCTTGGTGCGTGAGTTTTTCTCTT-TGAAAAAGGTTCAGTC 423
||||||||||| ||||||||||||||||| ||| |||||| || | ||||||||| ||||
Sbjct 364 TGGAAGGAGCGACGTAAGTTCTTGGTGCGCGAGCTTTTCTGTTCT-AAAAAGGTTGAGTC 422
Query 424 TTTCGGTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTTGGAATCAGC 483
||| || ||||||| ||| ||||||||||||||||| ||||||||| ||| ||||| ||
Sbjct 423 TTTTGGATATATCAAAGAAGAAGAATGTAACTTTCTGGTCAAGAAATTGTCAGAATCGGC 482
Query 484 CGTGGATCAATCTCCGGTTGATTTGAGCAAAACCCTTTTTTG-GCTAACCGCGAGTG-TC 541
|||||||| |||||||| |||||||||||||||||||| | |||| | ||||| | ||
Sbjct 483 AGTGGATCAGTCTCCGGTCGATTTGAGCAAAACCCTTTTC-GAGCTAGCTGCGAG-GATC 540
Query 542 ATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATAAAGACAAG 601
||||||||||| |||||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct 541 CTGTTTAGAGTTTCTTTTGGACAGAGTTTCCACGAGATTGAGTTTATCAATAAAGACAAG 600
Query 602 GTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGCTCTGATTTC 661
||||||| ||||| |||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct 601 ATCGATGAACTTGTATTTGAAATAGAGACAGCTCAGGCTAGTTTCACTTACTCTGATTTC 660
Query 662 TTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACACAAGAGGCTC 721
|||||||| || |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct 661 TTCCCTATCGCCGGACTTGGATGGCTTGTTGACTGGATTTCCGGGCAACACAAGAGGCTC 720
Query 722 AAAGATGTTTTCTTCAAGCTGGATGCTCTGTTTCA--ATGT--TGGATG-TCATGCAGA 775
|| |||| |||| | ||||| ||||||||| |||| |||| | |||| |||| ||||
Sbjct 721 AATGATGCTTTCCTAAAGCTCGATGCTCTGCTTCAGCATGTGATCGATGATCATTCAGA 779
Score = 782 bits (423), Expect = 0.0
Identities = 552/615 (90%), Gaps = 6/615 (1%)
Strand=Plus/Plus
Query 782 AATATATTTCTCGGAGGGATAGACACCGGAGCTCTTACTATGATATGGGCAATGACGGAG 841
|||||| | ||| |||||||||||| ||||||||||| ||||||||| |||||||||||
Sbjct 898 AATATAATAATCGCAGGGATAGACACAGGAGCTCTTACCATGATATGGACAATGACGGAG 957
Query 842 CTCGCTAGAAACCCGGAAGTGATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGGC 901
||||||||||| |||||||| ||||||||||||||| |||| |||||||||| | |||||
Sbjct 958 CTCGCTAGAAATCCGGAAGTAATGAAGAAAGTTCAATGCGAAATCCGAGACCACTTTGGC 1017
Query 902 AGA-AATAAAGAGAGAATCACCGAAGAAGATATCAATAAAGTTCCTTACTTGAACCTAGT 960
| | ||||| |||||||||||| |||||||| | |||||||||||| ||||||| | ||
Sbjct 1018 A-ACAATAAGGAGAGAATCACCAAAGAAGATCTTGATAAAGTTCCTTTCTTGAACTTGGT 1076
Query 961 GATCAAGGAAACATTCAGATTACA-CCATCCAGTTCCTCTTCTTCTCCCAAGGGAAACAA 1019
|||||||||| ||||||||||| | ||| || ||||||||| || |||||||||||||
Sbjct 1077 GATCAAGGAATCATTCAGATTATACCCA-GTAGCTCCTCTTCTGCTACCAAGGGAAACAA 1135
Query 1020 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACG 1079
|||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1136 TGGCTCACGTCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGGCGGATCTTGGTCAATG 1195
Query 1080 CTTGGGCGATAGGAAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGA 1139
||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 1196 TTTGGGCGATAGGAAGAGATCCGAAACTCTGGAAAAACCCGGAAGAGTTTAACCCCGAGA 1255
Query 1140 GATTTATCAATAGTCCTGTGGATTATAG-GGGACAACATTTCGAGCTCTTACCGTTTGGG 1198
| |||||| |||| || ||||||| ||| ||| |||||||||||||| ||||||||||||
Sbjct 1256 GGTTTATCGATAGCCCCGTGGATTTTAGAGGG-CAACATTTCGAGCTTTTACCGTTTGGG 1314
Query 1199 TCTGGACGAAGGATATGTCCCGGGATATCGATGGGTATGGCTACTGTAGAATTGGGACTC 1258
|||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||||
Sbjct 1315 TCTGGACGAAGGATATGTCCCGGGATGGAGATGGGGATGGCTACTCTGGAATTGGGACTC 1374
Query 1259 TTGAACTTACTTTACTTCTTCGACTGGAAGTTGCCTGATGGGATGACACATAAAGATATC 1318
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1375 TTGAACTTACTTTACTTCTTCGATTGGAAGTTGCCTGATGGGATGACACATAAAGATATC 1434
Query 1319 GATACTGAAGAAGTTGGCACTCTTACAATCGTCAAGAAAGTACCACTAAAACTTCTTCCA 1378
||||||||||||| ||| ||||||||| |||| |||||| |||| ||||| ||| |||||
Sbjct 1435 GATACTGAAGAAGCTGGTACTCTTACAGTCGTTAAGAAAATACCTCTAAAGCTTGTTCCA 1494
Query 1379 GTTCGATTTCAGTGA 1393
|||||| ||||||||
Sbjct 1495 GTTCGAGTTCAGTGA 1509
> Ahg484384 jgi|Araly1|484384|fgenesh2_kg.5__376__AT3G26170.1
Length=1644
Score = 821 bits (444), Expect = 0.0
Identities = 662/766 (86%), Gaps = 19/766 (2%)
Strand=Plus/Plus
Query 1 ATGGCAATCTCTTTACTCTTGTCTTTT-TCTCATCGCCTTTGCTTCGTTAATCTTCCTCG 59
||||| || ||||| ||| ||| |||| ||| | || | | |||||| ||||| |||
Sbjct 10 ATGGCGATATCTTTCCTC-TGT-TTTTGCCTCGTTACCCTCGTTTCGTTCATCTTTTTCG 67
Query 60 GAAAAAAGATCAAACGATCTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCA 119
|| |||||||||||||||||||||||| ||||||| |||||||| |||||||||||||
Sbjct 68 CCAAGAAGATCAAACGATCTAAATGGAATCTTCCTCCAAGCCCTCCCAAGTTTCCGGTCA 127
Query 120 TCGGAAACTTACATCA-ACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAA 178
||||||||||||| || | ||||||||||||||||| |||||||||||||||||||||||
Sbjct 128 TCGGAAACTTACACCAGA-TTGGAGAATTGCCTCACTGGTCACTTCAACGTCTAGCCGAA 186
Query 179 A-AAACCGGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATC 237
| | | |||| ||| |||||| ||||||| |||||||||||| ||||||| |||||||
Sbjct 187 AGATA-CGGACCTGTGATGCTTCTTCACTTTGGGTTTGTCCCTATAACTGTGGTCTCATC 245
Query 238 GAAAGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAA 297
|| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 246 GAGAGAAGCAGCTGAAGAAGTGCTCAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAA 305
Query 298 TCTTGTTGGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGG 357
||||| ||||||||| ||||||| |||| |||||||||| |||||||||| ||||||||
Sbjct 306 GCTTGTCGGGACGAGGTTACTTTCGCGGGATTTTAAAGATATTGGTTTTACGCCATACGG 365
Query 358 TGAAGAGTGGAAGGAGCGGCGTAAGTTCTTG-G-TGCGTGAGTTTTTCT-CTTTGAAAAA 414
| ||||||||||||||||||||||| | ||| | |||||||| |||||| | ||||| ||
Sbjct 366 TAAAGAGTGGAAGGAGCGGCGTAAG-T-TTGCGCTGCGTGAGCTTTTCTGC-TTGAATAA 422
Query 415 GGTTCAGTC-TTTCGGTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGT 473
||||| ||| ||| || |||| ||||||||||||||||||||||| |||||||||||||
Sbjct 423 GGTTCGGTCTTTTAGG-CATATTAGAGAGGAAGAATGTAACTTTCTGGTCAAGAAACTGT 481
Query 474 TGGAATCAGCCGTGGATCAATCTCCGGTTGATTTGAGCAAAACCCTTTTTTGGCTAACCG 533
|||||| || ||||||| |||||||| |||||||||||| | ||||| ||||||||||
Sbjct 482 CGGAATCCGCGGTGGATCGCTCTCCGGTCGATTTGAGCAAATCACTTTTCTGGCTAACCG 541
Query 534 CGAGTGTCATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATA 593
| ||| || | ||||||||||| || ||||||| ||||||||||||| | || |||||||
Sbjct 542 CAAGTATCCTTTTTAGAGTTGCCTTAGGACAGAATTTCCACGAGAGCAATTTTATCGATA 601
Query 594 AAGACAAG-GTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGC 652
||||| || |||| ||||| ||||| ||||| ||||| || | ||||||||||||||||
Sbjct 602 AAGAC-AGTATCGAAGAGCTCGTGTTCGAAGCTGAGACTGCCCTAGCTAGTTTCACTTGC 660
Query 653 TCTGATTTCTTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACAC 712
||||||||||||||| |||| |||||||| |||||||||||||| | ||||| ||||||
Sbjct 661 TCTGATTTCTTCCCTGTTGCCGGACTTGGATGGCTCGTTGACTGGCTCTCCGGACAACAC 720
Query 713 AAGAGGCTCAAAGATGTTT-TCTTCAAGCTGGATGCTCTGTTTCAA 757
|| |||||||| ||||||| | |||||||| |||||||||||||||
Sbjct 721 AAAAGGCTCAACGATGTTTAT-TTCAAGCTTGATGCTCTGTTTCAA 765
Score = 743 bits (402), Expect = 0.0
Identities = 569/649 (88%), Gaps = 13/649 (2%)
Strand=Plus/Plus
Query 782 AATATATTTCTCGGAGGGATAGACACCGGAGCTC-TTACTATGATATGGGCAATGACGGA 840
||||||||||| | |||||||||||| || || | | || ||||||||||||||||||||
Sbjct 907 AATATATTTCTTGCAGGGATAGACACAGGGGC-CATCACCATGATATGGGCAATGACGGA 965
Query 841 GCTCGCTAGAAACCCGGAAGTGATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGG 900
||||| || ||||||| || |||| |||||||||||||| ||||||||||| | |||||
Sbjct 966 GCTCGTTAAAAACCCGAAACTGATAAAGAAAGTTCAAGGTGAGATCCGAGAACAACTTGG 1025
Query 901 CAGAAATAAAGAGAGAATCACCGAAGAAGATATCAATAAAGTTCCTTACTTGAACCTAGT 960
||| ||||| |||||||||||||| |||||| || ||||||||||||||||||| | ||
Sbjct 1026 CAGCAATAAGGAGAGAATCACCGAGGAAGATGTCGATAAAGTTCCTTACTTGAAGATGGT 1085
Query 961 GATCAAGGAAACATTCAGATTACA-CCATCCAGTTCCTCTTCTTCTCCCAAGGGAAACAA 1019
||||| ||||||||||| ||||| ||| ||| ||||||| | ||||||||||||||||
Sbjct 1086 AATCAAAGAAACATTCAGGTTACACCCA-GCAGCTCCTCTTATACTCCCAAGGGAAACAA 1144
Query 1020 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACG 1079
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1145 TGGCTCACATCAAAGTTCAAGGCTATGATATTCCTCCCAAGAGGCGGATCTTGGTCAACG 1204
Query 1080 CTTGGGCGATAGGAAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGA 1139
|| ||| |||||||||||||| ||||||||||| |||||||||||||||||||| || |
Sbjct 1205 TTTTGGCAATAGGAAGAGATCCCAAACTCTGGACAAACCCGGAAGAGTTTAACCCTGACA 1264
Query 1140 GATTTATCA-ATAGTC-CTGTGGATTATAGGGGACAACATTTCGAGCTCTTACCGTTTGG 1197
| ||||| | |||| | |||||||||| || |||||||||| |||||||||||| |||||
Sbjct 1265 GGTTTAT-AGATAG-CTCTGTGGATTACAGAGGACAACATTACGAGCTCTTACCATTTGG 1322
Query 1198 GTCTGGACGAAGGATATGTCCCGGGATATCGATGGGTATGGCTACTGTAGAATTGGGACT 1257
||| || |||||||| ||||||||||| | ||||| || ||||| || ||||| |||||
Sbjct 1323 GTCCGGTCGAAGGATGTGTCCCGGGATGCCAATGGGGATTGCTACCGTCGAATTAGGACT 1382
Query 1258 CTTGAACTTACTTTACTTCTTCGACTGGAAGTTGCCTGATGGGATGACACATAAAGATAT 1317
|||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1383 CTTGAACTTACTTTACTTCTTCGATTGGAAGTTACCTGATGGGATGACACATAAAGATAT 1442
Query 1318 CGATACTGAAGAAGTTGGCACTCTTACAATCGTCAAGAAAGTACCACTAAA-ACTTCTTC 1376
|||||||||||||| ||| ||||||||||||||||||||||| || ||||| | || |||
Sbjct 1443 CGATACTGAAGAAGCTGGTACTCTTACAATCGTCAAGAAAGTTCCTCTAAAGA-TTGTTC 1501
Query 1377 CAGTTCGATTTCAGTGATCAAACCAAACTCCAAAC-TTTGAAGATGTTT 1424
|||||||| ||||||||| | ||| ||||||||| ||| || ||||||
Sbjct 1502 CAGTTCGAGTTCAGTGATGGA-CCATACTCCAAACCTTT-AATATGTTT 1548
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53250162510
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5