BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G26165.1 Length=1424 Score E Sequences producing significant alignments: (Bits) Value Ahg896478 jgi|Araly1|896478|Al_scaffold_0005_444 1131 0.0 Ahg322757 jgi|Araly1|322757|fgenesh1_pm.C_scaffold_5000301 926 0.0 Ahg896477 jgi|Araly1|896477|Al_scaffold_0005_443 876 0.0 Ahg484384 jgi|Araly1|484384|fgenesh2_kg.5__376__AT3G26170.1 821 0.0 > Ahg896478 jgi|Araly1|896478|Al_scaffold_0005_444 Length=1260 Score = 1131 bits (612), Expect = 0.0 Identities = 711/759 (94%), Gaps = 5/759 (1%) Strand=Plus/Plus Query 1 ATGGCAATCTCTTTACTCTTGTCTTTTTCTCATCGCCTTTGCTTCGTTAAT-CTTCCTCG 59 |||||||||||||| || |||||| |||||||||||||||| |||||||| ||| || | Sbjct 1 ATGGCAATCTCTTTGTTC-TGTCTTCTTCTCATCGCCTTTGCGTCGTTAATCCTT-CTTG 58 Query 60 GAAAAAAGATCAAACGATCTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCA 119 | || ||||||||||| |||||||||||| ||||||| |||||||| |||||||| |||| Sbjct 59 GTAAGAAGATCAAACGCTCTAAATGGAATCTTCCTCCAAGCCCTCCAAAGTTTCCAGTCA 118 Query 120 TCGGAAACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAA 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 TCGGAAACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAA 178 Query 180 AAACCGGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGA 239 ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 179 GAACCGGACATGTTATGCTTCTTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGA 238 Query 240 AAGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAATC 299 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct 239 AAGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAAGC 298 Query 300 TTGTTGGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGGTG 359 ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| Sbjct 299 TTGTTGGGACGAGGCTAATTTCTCGGGGTTTTAAAGATGTCGGTTTTACCCCATACGGTG 358 Query 360 AAGAGTGGAAGGAGCGGCGTAAGTTCTTGGTGCGTGAGTTTTTCTCTTTGAAAAAGGTTC 419 ||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||| Sbjct 359 AAGAGTGGAAGGAGCGGCGCAAGTTCTTGGTGCGTGAGTTTTTCTGTTTGAAGAAGGTTC 418 Query 420 AGTCTTTCGGTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTTGGAAT 479 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 419 AGTCTTTCGGGTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTCGGAAT 478 Query 480 CAGCCGTGGATC-AATCTCCGGTTGATTTGAGCAAAACCCTTTTTTGGCTAACCGCGAGT 538 |||| ||||||| || |||| || ||| |||||||||||||||| ||||||||||| ||| Sbjct 479 CAGCAGTGGATCGAA-CTCCAGTCGATATGAGCAAAACCCTTTTCTGGCTAACCGCCAGT 537 Query 539 GTCATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATAAAGAC 598 || ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| Sbjct 538 ATCCTGTTTAGAGTTGCTTCTGGACAGAGTTTCCACGAGAGTAAGTTTATCGATAAAGAC 597 Query 599 AAGGTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGCTCTGAT 658 |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 598 AAGGTCGATGAGCTTGTGTTTGAAGCCGAGACAGCTCAGGCTAGTTTCACTTGCTCTGAT 657 Query 659 TTCTTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACACAAGAGG 718 |||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 658 TTCTTCCCCATTGCCGGACTTGGATGGATCGTTGACTGTATTTCCGGGCAACACAAGAGG 717 Query 719 CTCAAAGATGTTTTCTTCAAGCTGGATGCTCTGTTTCAA 757 ||||||||||||||||||||||||||||||||||||||| Sbjct 718 CTCAAAGATGTTTTCTTCAAGCTGGATGCTCTGTTTCAA 756 Score = 496 bits (268), Expect = 3e-139 Identities = 330/361 (91%), Gaps = 0/361 (0%) Strand=Plus/Plus Query 1033 GGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACGCTTGGGCGATAGG 1092 ||||||||||||| |||||||||| |||| ||||||||||||||| |||||||||||||| Sbjct 900 GGTTCAAGGCTATAATATTCCTCCGAAGACACGGATCTTGGTCAATGCTTGGGCGATAGG 959 Query 1093 AAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGAGATTTATCAATAG 1152 ||||||||| ||| | ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 960 AAGAGATCCTAAAGTTTGGACAAACCCGGAAGAGTTTAACCCCGAGAGGTTTATCAATAG 1019 Query 1153 TCCTGTGGATTATAGGGGACAACATTTCGAGCTCTTACCGTTTGGGTCTGGACGAAGGAT 1212 ||| ||||||| || ||||||||||| ||||| |||||||| || ||||| |||||| | Sbjct 1020 CCCTTTGGATTACAGTGGACAACATTTTGAGCTATTACCGTTCGGCTCTGGTCGAAGGGT 1079 Query 1213 ATGTCCCGGGATATCGATGGGTATGGCTACTGTAGAATTGGGACTCTTGAACTTACTTTA 1272 |||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 1080 ATGTCCCGGGATGGCGATGGGGATGGCTACTGTGGAATTGGGACTCTTGAACTTACTTTA 1139 Query 1273 CTTCTTCGACTGGAAGTTGCCTGATGGGATGACACATAAAGATATCGATACTGAAGAAGT 1332 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1140 CTTCTTCGATTGGAAGTTGCCTGATGGGATGACACATAAAGATATCGATACTGAAGAAGC 1199 Query 1333 TGGCACTCTTACAATCGTCAAGAAAGTACCACTAAAACTTCTTCCAGTTCGATTTCAGTG 1392 ||| ||||||||||||||||||||||| || ||||| ||| ||||||||||| ||||||| Sbjct 1200 TGGTACTCTTACAATCGTCAAGAAAGTTCCTCTAAAGCTTGTTCCAGTTCGAGTTCAGTG 1259 Query 1393 A 1393 | Sbjct 1260 A 1260 > Ahg322757 jgi|Araly1|322757|fgenesh1_pm.C_scaffold_5000301 Length=1509 Score = 926 bits (501), Expect = 0.0 Identities = 676/761 (89%), Gaps = 9/761 (1%) Strand=Plus/Plus Query 1 ATGGCAATCTCTTTACTCTTGTCTTTTTCTCATCGCCTTTGCTTCGTTAATCTTCCTCGG 60 |||||||||||||||||| ||||||||||||||| |||| | |||||||||||| || Sbjct 1 ATGGCAATCTCTTTACTC-TGTCTTTTTCTCATCACCTTCGTTTCGTTAATCTTTGTCTT 59 Query 61 AAAAAAGATCAAACGATCTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCAT 120 || ||||||||||| | |||||||||| ||||||| || ||||||| |||||||||||| Sbjct 60 CAAGAAGATCAAACGCTTTAAATGGAATCTTCCTCCAAGTCCTCCTACGTTTCCGGTCAT 119 Query 121 CGGAAACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAAA 180 |||||||||||| ||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct 120 CGGAAACTTACACCAAGTTGGAGAATTGCCTCATAGGTCATTTCAACGTCTAGCCGAAAG 179 Query 181 AACCGGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGAA 240 ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct 180 AACCGGACATGTTATGCTTCTTCACTTTGGGTTTGTCCCTGTAACTGTTATCTCATCGAG 239 Query 241 AGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAATCT 300 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 240 GGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAAGTGTTGCAGCAGGCCTAAGCT 299 Query 301 TGTTGGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGGTGA 360 ||| |||||||||||| | |||||||||||||||||| | ||||||||||||||||||| Sbjct 300 TGTCGGGACGAGGCTAATCTCTCGGGGTTTTAAAGATATCAGTTTTACTCCATACGGTGA 359 Query 361 AGAGTGGAAGGAGCGGCGTAAGTTCTTGGTGCGTGAGTTTTTCTCTTTGAAAAAGGTTCA 420 |||||||| |||||||||||||||||||||||| ||| |||||| ||| ||||||||||| Sbjct 360 AGAGTGGAGGGAGCGGCGTAAGTTCTTGGTGCGAGAGCTTTTCTGTTTTAAAAAGGTTCA 419 Query 421 GTCTTT-CG-GTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTTGGAA 478 |||||| || | | ||| ||| ||||||||||||||||| ||||||||||||| |||| Sbjct 420 GTCTTTTCGAGAG-T-TCATAGAAGAAGAATGTAACTTTCTGGTCAAGAAACTGTCGGAA 477 Query 479 TCAGCCGT-GGATCAATCTCCGGTTGATTTGAGCAAAACCCTTTTTTGGCTAACCGCGAG 537 ||||| || || || |||||||||||||||||||||||||||| |||||| | ||||| Sbjct 478 TCAGCAGTAGG-TCGGGCTCCGGTTGATTTGAGCAAAACCCTTTTCTGGCTAGCTGCGAG 536 Query 538 TGTCATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATAAAGA 597 | || |||||||| ||||||||||||||||||||||||| | |||||| | ||||||||| Sbjct 537 TATCCTGTTTAGAATTGCTTTTGGACAGAGTTTCCACGACAACGAGTTTAACGATAAAGA 596 Query 598 CAAGGTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGCTCTGA 657 |||| ||||||| ||| | |||||| ||||||| ||||| ||||||||||||| |||||| Sbjct 597 CAAGATCGATGAACTTATATTTGAAACCGAGACAGCTCAGGCTAGTTTCACTTACTCTGA 656 Query 658 TTTCTTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACACAAGAG 717 |||||||||||| || |||||||| ||||| |||||||| ||||||||| |||||||| | Sbjct 657 TTTCTTCCCTATGGCCGGACTTGGATGGCTTGTTGACTGGATTTCCGGGAAACACAAGTG 716 Query 718 GCTCAA-AGATGTTTTCTTCAAGCTGGATGCTCTGTTTCAA 757 |||||| | |||| ||||||||||| |||||| |||||||| Sbjct 717 GCTCAACA-ATGTCTTCTTCAAGCTCGATGCTTTGTTTCAA 756 Score = 743 bits (402), Expect = 0.0 Identities = 547/617 (89%), Gaps = 10/617 (2%) Strand=Plus/Plus Query 782 AATATATTTCTCGGAGGGATAGACACCGGAGCTCTTACTATGATATGGGCAATGACGGAG 841 |||||| || ||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 898 AATATAATTATCGCAGGGATAGACACAGGAGCTCTTACTATGATATGGGCAATGACGGAG 957 Query 842 CTCGCTAGAAACCCGGAAGTGATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGGC 901 ||||| |||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 958 CTCGCAAGAAACCCGGAACTAATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGGC 1017 Query 902 AGA-AATAAAGAGAGAATCACCGAAGAAGATATCAATAAAGTTCCTTACTTGAACCTAGT 960 | | |||||||||||||||| |||||||| ||||||||||||||| ||||||| | || Sbjct 1018 A-ACGATAAAGAGAGAATCACAAAAGAAGATCTCAATAAAGTTCCTTTCTTGAACTTGGT 1076 Query 961 GATCAAGGAAACATTCAGATTACA-CCATCCAGTTCCTCTTCTTCTCCCAAGGGAAACAA 1019 |||||||||||||||||||||||| ||| || ||||||||| |||||||| ||||||| Sbjct 1077 GATCAAGGAAACATTCAGATTACATCCA-GTAGCTCCTCTTCTACTCCCAAGAGAAACAA 1135 Query 1020 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACG 1079 ||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||| Sbjct 1136 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCAAAGAGACGGATCTTAGTAAACA 1195 Query 1080 CTTGGGCGATAGGAAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGA 1139 ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 1196 CTTGGGCAATAGGAAGAGATCCGAAACTCTGGAAAAACCCGGAAGAGTTTAACCCCGAGA 1255 Query 1140 GATTTATCAATAGTCCTGTGGATTATAGGGGACAACATTTCGAGCTCTTACCGTTTGGGT 1199 | |||||||| | |||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 1256 GGTTTATCAACAACCCTGTGGATTATAGAGGACAACATTTCGAGCTCTTACCGTTCGGGT 1315 Query 1200 CTGGACGAAGGATATGTCCCGGGATATCGATGGGTATGGCTACT-GTAGAATTGGGACTC 1258 | || |||||||||||||||||||| | |||| || ||| | || |||||||||||| Sbjct 1316 CCGGTCGAAGGATATGTCCCGGGATGGGGTTGGGGATCACTA-TAGTGGAATTGGGACTC 1374 Query 1259 TTGAACTTACTTTACTTCTTCGACTGGA-AGTTGCCTGATGGGATGACACATAAAGATAT 1317 ||||||||||||||||||||||| |||| || || |||||||||||||||||||| || Sbjct 1375 TTGAACTTACTTTACTTCTTCGATTGGAGAGCA-CCAGATGGGATGACACATAAAGACAT 1433 Query 1318 CGATACTGAAGAAGTTGGC-ACTCTTACAATCGTCAAGAAAGTACCACTAAAACTTCTTC 1376 |||||| ||||| ||| | ||||||||| |||||||||||||||| || || ||| | | Sbjct 1434 CGATACAGAAGATTTTG-CTACTCTTACAGTCGTCAAGAAAGTACCTCTCAAGCTTGTCC 1492 Query 1377 CAGTTCGATTTCAGTGA 1393 |||||| | | |||||| Sbjct 1493 CAGTTCAAGTCCAGTGA 1509 > Ahg896477 jgi|Araly1|896477|Al_scaffold_0005_443 Length=1509 Score = 876 bits (474), Expect = 0.0 Identities = 680/779 (87%), Gaps = 16/779 (2%) Strand=Plus/Plus Query 7 ATCTCTTTACTCTTGTCTTTTTCTCATCGCCTTT-GCTTCGTTAATCTTCCTCGGAAAAA 65 |||||||| ||| ||| ||||||||||| |||| | ||||||||| || |||| || | Sbjct 7 ATCTCTTTGCTC-TGTGTTTTTCTCATC-ACTTTAGTTTCGTTAATTTTTTTCGGCAAGA 64 Query 66 AGATCAAACGAT-CTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCATCGGA 124 ||| |||||| | | ||||||||| |||| || ||||||||||||||||||||||| ||| Sbjct 65 AGACCAAACGCTGC-AAATGGAATCTTCCACCAAGCCCTCCTAAGTTTCCGGTCATAGGA 123 Query 125 AACTTACATCAACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAAAAAACC 184 |||||||||||||||||||||||||||||||| |||||||||||||| |||| || |||| Sbjct 124 AACTTACATCAACTTGGAGAATTGCCTCACAGATCACTTCAACGTCTCGCCGCAAGAACC 183 Query 185 GGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATCGAAAGAA 244 ||| |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 184 GGACATGTGATGCTTCTTCACTTAGGGTTTGTCCCTGTAACTGTGATCTCATCGAAAGAA 243 Query 245 GCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAATCTTGTT 304 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | Sbjct 244 GCAGCTGAAGAAGTGCTTAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAACCTTCTC 303 Query 305 GGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGGTGAAGAG 364 ||| |||||||| | |||||||||||||||||| | |||||||||||||||| ||||| Sbjct 304 GGGTCGAGGCTAATCTCTCGGGGTTTTAAAGATATCAATTTTACTCCATACGGTAAAGAG 363 Query 365 TGGAAGGAGCGGCGTAAGTTCTTGGTGCGTGAGTTTTTCTCTT-TGAAAAAGGTTCAGTC 423 ||||||||||| ||||||||||||||||| ||| |||||| || | ||||||||| |||| Sbjct 364 TGGAAGGAGCGACGTAAGTTCTTGGTGCGCGAGCTTTTCTGTTCT-AAAAAGGTTGAGTC 422 Query 424 TTTCGGTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGTTGGAATCAGC 483 ||| || ||||||| ||| ||||||||||||||||| ||||||||| ||| ||||| || Sbjct 423 TTTTGGATATATCAAAGAAGAAGAATGTAACTTTCTGGTCAAGAAATTGTCAGAATCGGC 482 Query 484 CGTGGATCAATCTCCGGTTGATTTGAGCAAAACCCTTTTTTG-GCTAACCGCGAGTG-TC 541 |||||||| |||||||| |||||||||||||||||||| | |||| | ||||| | || Sbjct 483 AGTGGATCAGTCTCCGGTCGATTTGAGCAAAACCCTTTTC-GAGCTAGCTGCGAG-GATC 540 Query 542 ATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATAAAGACAAG 601 ||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||| Sbjct 541 CTGTTTAGAGTTTCTTTTGGACAGAGTTTCCACGAGATTGAGTTTATCAATAAAGACAAG 600 Query 602 GTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGCTCTGATTTC 661 ||||||| ||||| |||||| ||||| ||||| ||||||||||||| |||||||||| Sbjct 601 ATCGATGAACTTGTATTTGAAATAGAGACAGCTCAGGCTAGTTTCACTTACTCTGATTTC 660 Query 662 TTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACACAAGAGGCTC 721 |||||||| || |||||||| ||||| |||||||| |||||||||||||||||||||||| Sbjct 661 TTCCCTATCGCCGGACTTGGATGGCTTGTTGACTGGATTTCCGGGCAACACAAGAGGCTC 720 Query 722 AAAGATGTTTTCTTCAAGCTGGATGCTCTGTTTCA--ATGT--TGGATG-TCATGCAGA 775 || |||| |||| | ||||| ||||||||| |||| |||| | |||| |||| |||| Sbjct 721 AATGATGCTTTCCTAAAGCTCGATGCTCTGCTTCAGCATGTGATCGATGATCATTCAGA 779 Score = 782 bits (423), Expect = 0.0 Identities = 552/615 (90%), Gaps = 6/615 (1%) Strand=Plus/Plus Query 782 AATATATTTCTCGGAGGGATAGACACCGGAGCTCTTACTATGATATGGGCAATGACGGAG 841 |||||| | ||| |||||||||||| ||||||||||| ||||||||| ||||||||||| Sbjct 898 AATATAATAATCGCAGGGATAGACACAGGAGCTCTTACCATGATATGGACAATGACGGAG 957 Query 842 CTCGCTAGAAACCCGGAAGTGATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGGC 901 ||||||||||| |||||||| ||||||||||||||| |||| |||||||||| | ||||| Sbjct 958 CTCGCTAGAAATCCGGAAGTAATGAAGAAAGTTCAATGCGAAATCCGAGACCACTTTGGC 1017 Query 902 AGA-AATAAAGAGAGAATCACCGAAGAAGATATCAATAAAGTTCCTTACTTGAACCTAGT 960 | | ||||| |||||||||||| |||||||| | |||||||||||| ||||||| | || Sbjct 1018 A-ACAATAAGGAGAGAATCACCAAAGAAGATCTTGATAAAGTTCCTTTCTTGAACTTGGT 1076 Query 961 GATCAAGGAAACATTCAGATTACA-CCATCCAGTTCCTCTTCTTCTCCCAAGGGAAACAA 1019 |||||||||| ||||||||||| | ||| || ||||||||| || ||||||||||||| Sbjct 1077 GATCAAGGAATCATTCAGATTATACCCA-GTAGCTCCTCTTCTGCTACCAAGGGAAACAA 1135 Query 1020 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACG 1079 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 1136 TGGCTCACGTCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGGCGGATCTTGGTCAATG 1195 Query 1080 CTTGGGCGATAGGAAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGA 1139 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 1196 TTTGGGCGATAGGAAGAGATCCGAAACTCTGGAAAAACCCGGAAGAGTTTAACCCCGAGA 1255 Query 1140 GATTTATCAATAGTCCTGTGGATTATAG-GGGACAACATTTCGAGCTCTTACCGTTTGGG 1198 | |||||| |||| || ||||||| ||| ||| |||||||||||||| |||||||||||| Sbjct 1256 GGTTTATCGATAGCCCCGTGGATTTTAGAGGG-CAACATTTCGAGCTTTTACCGTTTGGG 1314 Query 1199 TCTGGACGAAGGATATGTCCCGGGATATCGATGGGTATGGCTACTGTAGAATTGGGACTC 1258 |||||||||||||||||||||||||| |||||| ||||||||| | |||||||||||| Sbjct 1315 TCTGGACGAAGGATATGTCCCGGGATGGAGATGGGGATGGCTACTCTGGAATTGGGACTC 1374 Query 1259 TTGAACTTACTTTACTTCTTCGACTGGAAGTTGCCTGATGGGATGACACATAAAGATATC 1318 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1375 TTGAACTTACTTTACTTCTTCGATTGGAAGTTGCCTGATGGGATGACACATAAAGATATC 1434 Query 1319 GATACTGAAGAAGTTGGCACTCTTACAATCGTCAAGAAAGTACCACTAAAACTTCTTCCA 1378 ||||||||||||| ||| ||||||||| |||| |||||| |||| ||||| ||| ||||| Sbjct 1435 GATACTGAAGAAGCTGGTACTCTTACAGTCGTTAAGAAAATACCTCTAAAGCTTGTTCCA 1494 Query 1379 GTTCGATTTCAGTGA 1393 |||||| |||||||| Sbjct 1495 GTTCGAGTTCAGTGA 1509 > Ahg484384 jgi|Araly1|484384|fgenesh2_kg.5__376__AT3G26170.1 Length=1644 Score = 821 bits (444), Expect = 0.0 Identities = 662/766 (86%), Gaps = 19/766 (2%) Strand=Plus/Plus Query 1 ATGGCAATCTCTTTACTCTTGTCTTTT-TCTCATCGCCTTTGCTTCGTTAATCTTCCTCG 59 ||||| || ||||| ||| ||| |||| ||| | || | | |||||| ||||| ||| Sbjct 10 ATGGCGATATCTTTCCTC-TGT-TTTTGCCTCGTTACCCTCGTTTCGTTCATCTTTTTCG 67 Query 60 GAAAAAAGATCAAACGATCTAAATGGAATTTTCCTCCCAGCCCTCCTAAGTTTCCGGTCA 119 || |||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct 68 CCAAGAAGATCAAACGATCTAAATGGAATCTTCCTCCAAGCCCTCCCAAGTTTCCGGTCA 127 Query 120 TCGGAAACTTACATCA-ACTTGGAGAATTGCCTCACAGGTCACTTCAACGTCTAGCCGAA 178 ||||||||||||| || | ||||||||||||||||| ||||||||||||||||||||||| Sbjct 128 TCGGAAACTTACACCAGA-TTGGAGAATTGCCTCACTGGTCACTTCAACGTCTAGCCGAA 186 Query 179 A-AAACCGGAGATGTTATGCTTATTCACTTAGGGTTTGTCCCTGTAACTGTTATCTCATC 237 | | | |||| ||| |||||| ||||||| |||||||||||| ||||||| ||||||| Sbjct 187 AGATA-CGGACCTGTGATGCTTCTTCACTTTGGGTTTGTCCCTATAACTGTGGTCTCATC 245 Query 238 GAAAGAAGCAGCTGAAGAAGTGCTTAGAACTCATGACCTAAACTGTTGCAGCAGGCCTAA 297 || ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| Sbjct 246 GAGAGAAGCAGCTGAAGAAGTGCTCAGAACTCATGACCTAGACTGTTGCAGCAGGCCTAA 305 Query 298 TCTTGTTGGGACGAGGCTACTTTCTCGGGGTTTTAAAGATGTTGGTTTTACTCCATACGG 357 ||||| ||||||||| ||||||| |||| |||||||||| |||||||||| |||||||| Sbjct 306 GCTTGTCGGGACGAGGTTACTTTCGCGGGATTTTAAAGATATTGGTTTTACGCCATACGG 365 Query 358 TGAAGAGTGGAAGGAGCGGCGTAAGTTCTTG-G-TGCGTGAGTTTTTCT-CTTTGAAAAA 414 | ||||||||||||||||||||||| | ||| | |||||||| |||||| | ||||| || Sbjct 366 TAAAGAGTGGAAGGAGCGGCGTAAG-T-TTGCGCTGCGTGAGCTTTTCTGC-TTGAATAA 422 Query 415 GGTTCAGTC-TTTCGGTTATATCAGAGAGGAAGAATGTAACTTTCTTGTCAAGAAACTGT 473 ||||| ||| ||| || |||| ||||||||||||||||||||||| ||||||||||||| Sbjct 423 GGTTCGGTCTTTTAGG-CATATTAGAGAGGAAGAATGTAACTTTCTGGTCAAGAAACTGT 481 Query 474 TGGAATCAGCCGTGGATCAATCTCCGGTTGATTTGAGCAAAACCCTTTTTTGGCTAACCG 533 |||||| || ||||||| |||||||| |||||||||||| | ||||| |||||||||| Sbjct 482 CGGAATCCGCGGTGGATCGCTCTCCGGTCGATTTGAGCAAATCACTTTTCTGGCTAACCG 541 Query 534 CGAGTGTCATGTTTAGAGTTGCTTTTGGACAGAGTTTCCACGAGAGCGAGTTCATCGATA 593 | ||| || | ||||||||||| || ||||||| ||||||||||||| | || ||||||| Sbjct 542 CAAGTATCCTTTTTAGAGTTGCCTTAGGACAGAATTTCCACGAGAGCAATTTTATCGATA 601 Query 594 AAGACAAG-GTCGATGAGCTTGTGTTTGAAGCCGAGACCGCTCAAGCTAGTTTCACTTGC 652 ||||| || |||| ||||| ||||| ||||| ||||| || | |||||||||||||||| Sbjct 602 AAGAC-AGTATCGAAGAGCTCGTGTTCGAAGCTGAGACTGCCCTAGCTAGTTTCACTTGC 660 Query 653 TCTGATTTCTTCCCTATTGCTGGACTTGGTTGGCTCGTTGACTGTATTTCCGGGCAACAC 712 ||||||||||||||| |||| |||||||| |||||||||||||| | ||||| |||||| Sbjct 661 TCTGATTTCTTCCCTGTTGCCGGACTTGGATGGCTCGTTGACTGGCTCTCCGGACAACAC 720 Query 713 AAGAGGCTCAAAGATGTTT-TCTTCAAGCTGGATGCTCTGTTTCAA 757 || |||||||| ||||||| | |||||||| ||||||||||||||| Sbjct 721 AAAAGGCTCAACGATGTTTAT-TTCAAGCTTGATGCTCTGTTTCAA 765 Score = 743 bits (402), Expect = 0.0 Identities = 569/649 (88%), Gaps = 13/649 (2%) Strand=Plus/Plus Query 782 AATATATTTCTCGGAGGGATAGACACCGGAGCTC-TTACTATGATATGGGCAATGACGGA 840 ||||||||||| | |||||||||||| || || | | || |||||||||||||||||||| Sbjct 907 AATATATTTCTTGCAGGGATAGACACAGGGGC-CATCACCATGATATGGGCAATGACGGA 965 Query 841 GCTCGCTAGAAACCCGGAAGTGATGAAGAAAGTTCAAGGCGAGATCCGAGACCGCCTTGG 900 ||||| || ||||||| || |||| |||||||||||||| ||||||||||| | ||||| Sbjct 966 GCTCGTTAAAAACCCGAAACTGATAAAGAAAGTTCAAGGTGAGATCCGAGAACAACTTGG 1025 Query 901 CAGAAATAAAGAGAGAATCACCGAAGAAGATATCAATAAAGTTCCTTACTTGAACCTAGT 960 ||| ||||| |||||||||||||| |||||| || ||||||||||||||||||| | || Sbjct 1026 CAGCAATAAGGAGAGAATCACCGAGGAAGATGTCGATAAAGTTCCTTACTTGAAGATGGT 1085 Query 961 GATCAAGGAAACATTCAGATTACA-CCATCCAGTTCCTCTTCTTCTCCCAAGGGAAACAA 1019 ||||| ||||||||||| ||||| ||| ||| ||||||| | |||||||||||||||| Sbjct 1086 AATCAAAGAAACATTCAGGTTACACCCA-GCAGCTCCTCTTATACTCCCAAGGGAAACAA 1144 Query 1020 TGGCTCACATCAAGGTTCAAGGCTATGATATTCCTCCCAAGAGACGGATCTTGGTCAACG 1079 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1145 TGGCTCACATCAAAGTTCAAGGCTATGATATTCCTCCCAAGAGGCGGATCTTGGTCAACG 1204 Query 1080 CTTGGGCGATAGGAAGAGATCCAAAACTCTGGACTAACCCGGAAGAGTTTAACCCCGAGA 1139 || ||| |||||||||||||| ||||||||||| |||||||||||||||||||| || | Sbjct 1205 TTTTGGCAATAGGAAGAGATCCCAAACTCTGGACAAACCCGGAAGAGTTTAACCCTGACA 1264 Query 1140 GATTTATCA-ATAGTC-CTGTGGATTATAGGGGACAACATTTCGAGCTCTTACCGTTTGG 1197 | ||||| | |||| | |||||||||| || |||||||||| |||||||||||| ||||| Sbjct 1265 GGTTTAT-AGATAG-CTCTGTGGATTACAGAGGACAACATTACGAGCTCTTACCATTTGG 1322 Query 1198 GTCTGGACGAAGGATATGTCCCGGGATATCGATGGGTATGGCTACTGTAGAATTGGGACT 1257 ||| || |||||||| ||||||||||| | ||||| || ||||| || ||||| ||||| Sbjct 1323 GTCCGGTCGAAGGATGTGTCCCGGGATGCCAATGGGGATTGCTACCGTCGAATTAGGACT 1382 Query 1258 CTTGAACTTACTTTACTTCTTCGACTGGAAGTTGCCTGATGGGATGACACATAAAGATAT 1317 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1383 CTTGAACTTACTTTACTTCTTCGATTGGAAGTTACCTGATGGGATGACACATAAAGATAT 1442 Query 1318 CGATACTGAAGAAGTTGGCACTCTTACAATCGTCAAGAAAGTACCACTAAA-ACTTCTTC 1376 |||||||||||||| ||| ||||||||||||||||||||||| || ||||| | || ||| Sbjct 1443 CGATACTGAAGAAGCTGGTACTCTTACAATCGTCAAGAAAGTTCCTCTAAAGA-TTGTTC 1501 Query 1377 CAGTTCGATTTCAGTGATCAAACCAAACTCCAAAC-TTTGAAGATGTTT 1424 |||||||| ||||||||| | ||| ||||||||| ||| || |||||| Sbjct 1502 CAGTTCGAGTTCAGTGATGGA-CCATACTCCAAACCTTT-AATATGTTT 1548 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53250162510 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5