BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G26330.1
Length=1619
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484396 jgi|Araly1|484396|fgenesh2_kg.5__388__AT3G26330.1 2246 0.0
Ahg346989 jgi|Araly1|346989|fgenesh1_pg.C_scaffold_5000381 1199 0.0
Ahg896490 jgi|Araly1|896490|Al_scaffold_0005_456 1195 0.0
Ahg346988 jgi|Araly1|346988|fgenesh1_pg.C_scaffold_5000380 1146 0.0
Ahg346994 jgi|Araly1|346994|fgenesh1_pg.C_scaffold_5000386 291 1e-77
> Ahg484396 jgi|Araly1|484396|fgenesh2_kg.5__388__AT3G26330.1
Length=1562
Score = 2246 bits (1216), Expect = 0.0
Identities = 1433/1539 (93%), Gaps = 10/1539 (1%)
Strand=Plus/Plus
Query 13 ATATAGTTGTCCCTTCATCAGTCATCAGATCAACAAATGGCTACTATTTGGTTTCTCCCA 72
|||||| |||| ||||||||||||||| |||||||||||||||| |||||||||||| ||
Sbjct 1 ATATAGCTGTCGCTTCATCAGTCATCAAATCAACAAATGGCTACAATTTGGTTTCTCTCA 60
Query 73 cttctctttctctcttgtcttcttcttGCCGCTTTAAGACTCAAGAAGCGGCGGCAACAT 132
|||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||
Sbjct 61 CTTCTCTTTCTCTCTTGTATTTTTCTTGCCGCTTTAAAACTCAAGAAGCGGCGGCAACAT 120
Query 133 CAACGGAAACCACCGTCTCCACCGGGCTTTCCGATCATCGGAAACTTGCATCAGCTTGGG 192
||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||
Sbjct 121 CAACGGAAACCACCGTCTCCACCGGGCTTTCCGATCATCGGAAACTTACTTCAGCTCGGA 180
Query 193 GAGCTACCACATCAATCTCTATGGAGTCTCTCCAAAAAATATGGTCCTGTAATGCTTTTG 252
|| |||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||
Sbjct 181 GAATTACCACATCAATCTCTATGGAGGCTCTCCAAAAAGTATGGTCCTGTGATGCTTTTG 240
Query 253 AAGTTTGGAAGTATCCCAACGGTTGTTGTCTCTTCTTCTGAAACAGCAAAGCAAGCTCTG 312
||| ||||||||||||| ||||| || || ||||| |||||||||||||| |||||| ||
Sbjct 241 AAGCTTGGAAGTATCCCTACGGTCGTAGTTTCTTCCTCTGAAACAGCAAAACAAGCTTTG 300
Query 313 AAAATCCATGACCTCAATTGTTGTAGCCGTCCAAGCTTAGCAGGACCAAGAGCGCTCTCT 372
||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||
Sbjct 301 AAAATCCATGACCTCCATTGTTGTAGCCGTCCAGGCTTGGCAGGACCAAGAGCGCTCTCT 360
Query 373 TACAACTACT-TGGACATAGTTTTCTCTCCTTTTAATGATTACTGGAAAGAATTGAGGAG 431
|||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 361 TACAACTA-TCTGGACATAGTTTTCTCTCCTTTTAATGATTACTGGAAAGAATTAAGGAG 419
Query 432 GATGTGTGTGCAAGAGCTTTTCAGTCCTAAACA-AGTTCATTTGATTCAACCCATCAGGG 490
||| ||||| ||||| || |||||| | |||| |||||| |||||||||||||| | |
Sbjct 420 GATTTGTGTCCAAGAACTCTTCAGT-GTTAACAGAGTTCACTTGATTCAACCCATAAAAG 478
Query 491 AAGAGGAAGTCAAGAAACTGATGAATTCATTCTCGGAATCAGCTGCTCAGAAAACTCCGG 550
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 479 ACGAGGAAGTCAAGAAACTGATGAATTCATTCTCCGAATCAGCTGCTCAGAAAACTCCGG 538
Query 551 TTAACTTGAGCGAGAAGTTAGCTTCTTTAACTGTTGGCGTGATATGCAAGGCAGCATTTG 610
|||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 539 TTAACTTGAGTGAGAAGTTAGCTTCTTTAACTGTAGGCGTGATATGCAAGTCAGCATTTG 598
Query 611 GTGTGAGTTTCCAAGGAACTGTGCTTAATAGTGACAACTTCGACAAGTTAATCCATGATG 670
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 GTGTTAGTTTCCAAGGAACTGTGCTTAATAGTGACAACTTCGACAAGTTAATCCATGATG 658
Query 671 CATTTTTGTTCTTGGGGAGCTTCTCTGCCTCGGATTATTTTCCAAATGTCGGCTGGATCA 730
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 659 CATTTTTGTTCTTGGGGAGCTTCTCTGCCTCGGATTATTTTCCAAATGTCGGTTGGATCA 718
Query 731 TCGACTGGCTCACGGGGTTACAAGGGCAGAGAGAGAGAAGTGTGAGAGGTCTTGACGCAT 790
|||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||||| || |
Sbjct 719 TCGATTGGCTCACGGGTTTACAAGGGCAAAGAGAGAGAAGCGTGAGGGGTCTTGATGCGT 778
Query 791 TCTATGAACAAATGTTTGATCTACATAAACAGGGGAACAAAGAAGGAGTTGAGGATTTTG 850
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 779 TCTATGAACAAATGTTTGATTTACATAAACAGGGGAATAAAGAAGGAGTTGAGGATTTTG 838
Query 851 TGGACTTGCTCTTGAAGTTGGAGAAAGAAGAAACTGTTCTTGGATATGGCAAGCTCACAA 910
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 839 TGGACTTGCTCTTGAAGTTGGAGAAAGAAGGAACTGTTCTTGGATATGGCAAGCTCACAA 898
Query 911 GAAACCATATCAAAGCAGTCTTAATGAATGTTCTTCTTGGAGGCATTGGAACTTCGGCTA 970
|||||||||||||||||||||||||||||||||||||||||||||| || ||||| || |
Sbjct 899 GAAACCATATCAAAGCAGTCTTAATGAATGTTCTTCTTGGAGGCATCGGCACTTCTGCAA 958
Query 971 TAACAATGACATGGGCAATGACAGAACTTATGAGAAACCCGCGAGTAATGAAGAAAGTTC 1030
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 TAACAATGACATGGGCCATGACAGAACTTATGAGAAACCCGCGAGTAATGAAGAAAGTTC 1018
Query 1031 AATCCGAAATCAGAAATCAAATTGGGGGCAAGTCAATGATCTGCTTGGATGACATAGACC 1090
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 1019 AATCCGAAATCAGAAATCAAATTGGGGGCAAGTCAATGATCACCTTGGATGACATAGATC 1078
Query 1091 AACTCCATTACCTGAAAATGGTGATCAATGAAACATGGAGGCTACATCCTCCAGCACCAC 1150
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1079 AGCTCCATTACCTGAAAATGGTGATCAATGAAACATGGAGGCTACATCCTCCAGCACCAC 1138
Query 1151 TTCTAGTTCCAAGAGAAGTAATGTCTGAATTTGAAATCAACGGCTACACGATTCCAGCCA 1210
|||| || ||||||||||||||||| |||||||| ||||||||||| |||||||||||||
Sbjct 1139 TTCTGGTCCCAAGAGAAGTAATGTCCGAATTTGAGATCAACGGCTATACGATTCCAGCCA 1198
Query 1211 AGACAAGACTTTATGTGAATGTATGGGGTATCGGGCGTGATCCAGATACTTGGAAAGATC 1270
|||||||||||||||| |||||||||| ||||||||||||||| ||||| |||||||| |
Sbjct 1199 AGACAAGACTTTATGTTAATGTATGGGCTATCGGGCGTGATCCCGATACATGGAAAGACC 1258
Query 1271 CAGAGGAGTTTCTTCCAGAGAGATTTGTTAACAGTAACATTGATGCAAAAGGACAAAACT 1330
| |||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||||
Sbjct 1259 CGGAGGAGTTTCTTCCAGAGAGGTTTGCTAATAGTAGCATTGATGCAAAAGGACAAAACT 1318
Query 1331 TTGAGCTGTTACCATTTGGAAGTGGTAGGAGAATGTGTCCTGCCATGTACATGGGGACAA 1390
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TTGAGTTATTACCATTTGGAAGTGGTAGGAGAATGTGTCCTGCCATGTACATGGGGACAA 1378
Query 1391 CAATGGTGGAGTTTGGTCTAGCCAATCTCTTGTACCAT-TTTGACTGGAAATTACCAGAA 1449
||||||||||||||||||| |||||| | ||||| | | ||||| ||| || ||||||||
Sbjct 1379 CAATGGTGGAGTTTGGTCTTGCCAATATGTTGTATC-TGTTTGATTGGGAACTACCAGAA 1437
Query 1450 GGCATGGTGGTCGAAGACATTGACATGGAAGAATCTCCTGGACTCAATGCCAGCAAGAAA 1509
|||| |||||| |||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1438 GGCAAGGTGGTTGAAGACATCGACATGGAAGAATCTCCTGGACTCAATGCGAGCAAGAAA 1497
Query 1510 AATGAGCTTGT-ACTTGTTCCTAGG-AAGTATTTAAATC 1546
||||||||| | |||| ||||| | |||| ||||||||
Sbjct 1498 AATGAGCTT-TCACTTCTTCCT-GTTAAGTTTTTAAATC 1534
> Ahg346989 jgi|Araly1|346989|fgenesh1_pg.C_scaffold_5000381
Length=1503
Score = 1199 bits (649), Expect = 0.0
Identities = 1231/1511 (81%), Gaps = 44/1511 (3%)
Strand=Plus/Plus
Query 58 ATTTGGTTTCTCCCActtctctttc-tc-tcttgtcttcttcttGCCGCT-TT-AAGACT 113
|||||| ||||| ||||| || ||| || || ||| || || | |||| | || || |
Sbjct 10 ATTTGGCTTCTCTCACTTTTC-TTCTTCATC-TGTATTATTGTAGCCG-TGTTCAA-CCA 65
Query 114 CAAGAAGCGGCGGCAA-CATCAACGGAAACCACCGTCTCCACCGGGCTTTCCGATCATCG 172
|||||||||| || || | ||||||| ||||||||||||||| ||||||||||||||||
Sbjct 66 CAAGAAGCGGAGG-AATTACCAACGGACACCACCGTCTCCACCAGGCTTTCCGATCATCG 124
Query 173 GAAACTTGCATCAGCTTGGGGAGCTACCACATCAATCTCTATGGAGTCTCTCCAAAAAAT 232
||||||||||||||||||| || |||||||||| ||||||||||||||||||||||| |
Sbjct 125 GAAACTTGCATCAGCTTGGAGAATTACCACATCAGTCTCTATGGAGTCTCTCCAAAAAGT 184
Query 233 ATGGTCCTGTAATGCTTTTGAAGTTTGGAAGTATCCCAACGGTTGTTGTCTCTTCTTCTG 292
||| |||||| |||||||||||| |||||||| | ||||| || | || ||| | || |
Sbjct 185 ATGATCCTGTGATGCTTTTGAAGCTTGGAAGTGTGCCAACAGTCATAGTTTCTACCTCCG 244
Query 293 AAACAGCAAAGCAAGCTCTGAAAATCCATGACCTCAATTGTTGTAGCCGTCCAAGCTTAG 352
|||||||||| |||||| ||||||||||||||||| |||||||||| ||||| |||| |
Sbjct 245 AAACAGCAAAACAAGCTTTGAAAATCCATGACCTCCATTGTTGTAGTCGTCCGGGCTTGG 304
Query 353 CAGGACCAAGAGCGCTCTCTTACAACTA-CTTGGACATAGTTTTCTCTCCTTTTAATGAT 411
|||| ||||||| ||||||||||||||| || |||||||| |||||| |||| | |||||
Sbjct 305 CAGGGCCAAGAGAGCTCTCTTACAACTATCT-GGACATAGCTTTCTCACCTTATGATGAT 363
Query 412 TACTGGAAAGAA-TTGAGGAGGAT-G-TGTGTGCAAGAGCTTTTCAGTCCTAAACAAGTT 468
|| ||||||||| || |||| | | | ||| | || || || |||| | ||||||| |||
Sbjct 364 TATTGGAAAGAAGTT-AGGAAGCTCGCTGT-T-CAGGAACTCTTCAATGCTAAACACGTT 420
Query 469 CATTTGATTCAACCCATCAGGGAAGAGGAAGTCAAGAAACTGATGAATTCATTCTCGGAA 528
|| | |||||||||||| | ||| ||||| |||||||||||||| ||||| || | |||
Sbjct 421 CACTCGATTCAACCCATGAAGGATGAGGAGGTCAAGAAACTGATCTATTCAATCGCAGAA 480
Query 529 TCAGC-TGCTCAGAAAACTCCGGTTAACTTGAGCGAGA-AGTTAGCTT-CTTTAACTGTT 585
||||| | ||||||| ||||||||||||||| | ||| | || ||| ||||||||||
Sbjct 481 TCAGCCT-CTCAGAAGTCTCCGGTTAACTTGAACAAGACATTT--CTTGCTTTAACTGTA 537
Query 586 GGCGT-GATATGCAAGG-CAGCATTTGGTGTGAGTTTCCAAGGAACTGTGCTTAATAGTG 643
| || | |||||| || |||| ||| |||||| ||| ||||||||||||| || ||||
Sbjct 538 AGTGTAG-TATGCA-GGACAGCGTTTAGTGTGAATTTTGAAGGAACTGTGCTCAACAGTG 595
Query 644 ACA-ACTTCGACAAGTTAATCCATGATGCATTTTTGTTCTTGGGGAGCTTCTCTGCCTCG 702
||| | ||| | || || ||| ||| || | | | ||||| ||||| ||||| ||
Sbjct 596 ACAGA-TTCAATAAAATAGTCCGTGAGGCGCTCGAGATGTTGGGAAGCTTTTCTGCTTCA 654
Query 703 GATTATT-TTCCAAATGTCGGCTGGATCATCGACTGGCTCACGGGGTTACAAGGGCAGAG 761
|||| | |||| ||||||| |||||||| ||| |||| || || || | ||| | |||
Sbjct 655 GATT-TCATTCCGTATGTCGGATGGATCATTGACAGGCTTACAGGTTTGCGAGGTCGGAG 713
Query 762 AGAGAGAAGTGTGAGAGGTCTTGACGCATTCTATGAACAAATGTTTGATCTACATAAACA 821
||||| ||| |||||| |||||| || ||||||||||||||||||||||| ||||||||
Sbjct 714 AGAGACAAGCATGAGAGATCTTGATGCCTTCTATGAACAAATGTTTGATCTCCATAAACA 773
Query 822 GGGGAACAAAGAAGG-AGTTGAGGATTTTGTGGACTTGCTCTTGAAGTTGGAGAAAGAAG 880
|| || ||||||| ||| || || |||||||| ||| | |||| ||||||||||||||
Sbjct 774 GGACAAGGAAGAAGGTAGT-GAAGACTTTGTGGATTTGTTGTTGAGGTTGGAGAAAGAAG 832
Query 881 AAACTGTTCTTGGATATGGCAAGCTCACAAGAAACCATATCAAAGCAGTCTTAATGAATG 940
|| ||||||||||| ||| ||||||||| |||||||||||||||||| |||| |||||||
Sbjct 833 AAGCTGTTCTTGGAAATGACAAGCTCACTAGAAACCATATCAAAGCAATCTTGATGAATG 892
Query 941 TTCTTCTTGGAGGCATTGGA-ACTTCGGCTATAACAATGACATGGGCAATGACAGAACTT 999
|||| || | ||| || | | ||||| || ||||| ||||||||||| ||| |||||||
Sbjct 893 TTCTGCTAGCAGGAATCG-ATACTTCTGCAATAACCATGACATGGGCGATGGCAGAACTC 951
Query 1000 ATGA-GAAACCCGCGAGTAATGAAGAAAGTTCAATCCGAAATCAGAAATCAAATTGGGGG 1058
|| ||| || ||||| ||||| ||||||||||| |||||||||| ||||| |
Sbjct 952 GCGAAGAATCCA-CGAGTGATGAAAAAAGTTCAATCTGAAATCAGAAGCCAAATCAAGAA 1010
Query 1059 CAA-GTCAATGA-TCTGCTTGGATGACATAGACCAACTCCATTACCTGAAAATGGTGATC 1116
||| | || || || |||| |||||| ||| || || | ||||||||||||||||||
Sbjct 1011 CAAAGA-AA-GAATCAGCTTCCATGACACAGATCAGCTTGAGTACCTGAAAATGGTGATC 1068
Query 1117 AATGAAACATGGAGGCTACATCCTCCAGCACC-ACTTCTAGTTCCAAGAGAAGTAATGTC 1175
|| ||||| |||||| |||| |||||| |||| | | || | |||||||||| ||||||
Sbjct 1069 AAAGAAACGTGGAGGTTACACCCTCCAACACCTA-TCCTCCTCCCAAGAGAAGCAATGTC 1127
Query 1176 TGAATTTGAAATCAACGGCTACACGATTCCAGCCAAGACAAGACTTTATGTGAATGTATG 1235
|||||| || |||||||||||||| ||||| | ||||||| | ||| |||| ||||||||
Sbjct 1128 TGAATTCGAGATCAACGGCTACACAATTCCTGTCAAGACACGGCTTCATGTAAATGTATG 1187
Query 1236 GGGTATCGGGCGTGATCCAGATACTTGGAAAGATCCAGAGGAGTTTCTTCCAGAGAGATT 1295
|| ||||||||||||||| ||||| |||||||| || || | |||||| ||||| || ||
Sbjct 1188 GGCTATCGGGCGTGATCCCGATACCTGGAAAGACCCTGAAGTGTTTCTCCCAGAAAGGTT 1247
Query 1296 TGTTAACAGTAACATTGATGCAAAAGGACAAAACTTTGAGCTGTTACCATTTGGAAGTGG 1355
| | | ||||||||||||||||||||||| | |||||||||||||| ||||| | ||
Sbjct 1248 TATGGATAGTAACATTGATGCAAAAGGACAGCATTTTGAGCTGTTACCGTTTGGGGGCGG 1307
Query 1356 TAGGAGAATGTGTCCTGCCATGTACATGGGGACAACAATGGTGGAGTTTGGTCTAGCCAA 1415
||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||
Sbjct 1308 CCGGAGAATGTGTCCTGGAATGTACATGGGGGCAACAATGGTGGAGTTTGGTCTAGCTAA 1367
Query 1416 TCTCTTGTACCATTTTGACTGGAAATTACCAGAAGGCATGGTGGTCGAAGACATTGACAT 1475
||| ||||| |||||||||||||| ||||||||||||||| ||| ||||| || |||||
Sbjct 1368 TCTGTTGTATCATTTTGACTGGAAGTTACCAGAAGGCATGAAGGTTGAAGATATCGACAT 1427
Query 1476 GGAAGAATCTCCTGGACTCAATGCCAGCAAGAAAAATGAGCTTGTACTTGTTCCTAGGAA 1535
||| ||| ||||||| |||| || || ||||||||| |||||| ||||||| || | |||
Sbjct 1428 GGAGGAAGCTCCTGGTCTCACTGTCAACAAGAAAAACGAGCTTCTACTTGTCCCCACGAA 1487
Query 1536 GTATTTAAATC 1546
|||| || |||
Sbjct 1488 GTATCTAGATC 1498
> Ahg896490 jgi|Araly1|896490|Al_scaffold_0005_456
Length=1506
Score = 1195 bits (647), Expect = 0.0
Identities = 1228/1505 (82%), Gaps = 54/1505 (4%)
Strand=Plus/Plus
Query 49 ATGGC-TACTATTTGGTTTCTCCCActtctctttctc-tcttgtcttcttctt-GCCGCT 105
||||| ||| |||||| |||| |||||| |||| ||| || ||| ||||| || |||| |
Sbjct 1 ATGGCTTAC-ATTTGGCTTCTTCCACTTATCTTCCTCGTC-TGTATTCTT-TTCGCCGTT 57
Query 106 TT-AAGACTCAAGAAGCGGCGGCAACATCAACGGAAACCACCGTCTCCACCGGGCTTTCC 164
|| || | |||||| | ||| | || | ||| | ||||||||| || ||||||||
Sbjct 58 TTCAA-CCACAAGAAACATCGG-GA-AT-ATCGGCAGTTACCGTCTCCTCCTGGCTTTCC 113
Query 165 GATCATCGGAAACTTGCATCAGCTTGGGGAGCTACCACATCAATCTCTATGGAGTCTCTC 224
|||||||||||||| || ||| | || || |||||||||| |||||||||| ||||
Sbjct 114 AATCATCGGAAACTTACACCAGATCGGTGAATTACCACATCAGTCTCTATGGAAACTCT- 172
Query 225 CAAA-AAATATGGTCCTGTAATGCTTTTGAAGTTTGGAAGTA-TCCCAACGGTTGTTGTC 282
|||| || |||||||| || |||| ||||| | ||||||| | ||||||| || || ||
Sbjct 173 CAAAGAAGTATGGTCCGGTGATGCATTTGATGCTTGGAAG-AGTCCCAACAGTCGTAGTT 231
Query 283 TCTTCTTCTGAAACAGCAAAG-CAAGCTCTGAAAATCCATGACCTCAATTGTTGTAGC-C 340
||||| || || ||||| ||| |||| ||||| | | ||||| ||| |||||||| | |
Sbjct 232 TCTTCCTCGGATACAGC-AAGACAAGTTCTGAGAGTTCATGATCTCCTTTGTTGTA-CTC 289
Query 341 GTCCAAGCTTAG-CAGGACCAAGAGCGCTCTCTTACAACTACT-TGGACATAGTTTTCTC 398
|||||||||| | |||||||||||| ||||||||||||||| | | ||||| | ||||||
Sbjct 290 GTCCAAGCTT-GACAGGACCAAGAGAGCTCTCTTACAACTA-TCTAGACATTGCTTTCTC 347
Query 399 TCCTTTTAATGATTACTGGAAAGAATTGAGGAGGATGTGTGTGCAAGAGCTTTTCAGTCC 458
|||||| ||||||| ||||||||| | |||| | | ||||| ||||| ||||||||| |
Sbjct 348 ACCTTTTGATGATTATTGGAAAGAAGTAAGGAAGCTCTGTGTTCAAGAACTTTTCAGTAC 407
Query 459 TAAACAAGTTCATTTGATTCAACCCATCAGGGAAGAGGAAGTCAAGAAACTGAT-GAATT 517
|||||||||||| | ||||||||| || | ||| ||||| |||||||||||||| | |||
Sbjct 408 TAAACAAGTTCACTCGATTCAACCGATTAAGGACGAGGAGGTCAAGAAACTGATCG-ATT 466
Query 518 CATTCTCGGAATCAGCTGCTCAGAAAACTCCGGTTAACTTGAGCGAGAAGTTAG-CTT-C 575
|| || | ||||||||| ||||||| ||||| |||||||||| | | ||| | | ||| |
Sbjct 467 CAATCGCCGAATCAGCTTCTCAGAAGACTCCCGTTAACTTGAACAATAAG-T-GTCTTGC 524
Query 576 TTTAACTGTTGGCGTGA-TATGCAAGG-CAGCATTTGGTGTGAGTTTCCAAGGAACTGTG 633
| ||||||| | || | ||||| ||| ||||||||||||||||||| | ||||||||
Sbjct 525 TCTAACTGTAAGTGT-AGTATGC-AGGACAGCATTTGGTGTGAGTTTTGAGGGAACTGTA 582
Query 634 CTTAATAGTGACA-ACTTCGACAAGTTAATCCATGATGCATTTTTGTTCTTGGGGAGCTT 692
|| || | ||||| | ||| |||| || ||| || || | | | ||||| |||||
Sbjct 583 CTCAACAATGACAGA-TTCAACAAAATAGTCCGCGAGGCGCTCGAGATGTTGGGAAGCTT 641
Query 693 CTCTGCCTCGGATTAT-TTTCCAAATGTCGGCTGGATCATCGACTG-GCTCACGGGGTTA 750
||||||||||||| | |||| ||||||| ||||||||||| || | | || |||||
Sbjct 642 TTCTGCCTCGGATT-TCATTCCGTATGTCGGATGGATCATCGA-TGTGTTGAC-GGGTTT 698
Query 751 CAA-GGGCAGAGAGAGAGAAGTGTGAGAGGTCTTGACGCATTCTATGAACAAATGTTTGA 809
|| || | |||||||||||| ||||| ||| | ||||||| |||||||||||||||
Sbjct 699 GAATGGACGGAGAGAGAGAAGCAAGAGAGATCTCAATGCATTCTTTGAACAAATGTTTGA 758
Query 810 TCTACATAAACAGGGGAACAAAGA-AGGAGTTGAGGATTTTGTGGACTTGCTCTTGAA-G 867
||||||||||||||| || ||| | |||| ||| |||||||||||||||||||| || |
Sbjct 759 TCTACATAAACAGGGAAAGAAACAGGGGAG-TGAAGATTTTGTGGACTTGCTCTT-AAGG 816
Query 868 TTGGAGAAAGAAGAAACTGTTCTTGGATATGGCAAGCTCACAAGAAACCATATCAAAGCA 927
||||||||||||||| | ||||||||| ||| || ||||||||||||||||||||||||
Sbjct 817 TTGGAGAAAGAAGAAGCAGTTCTTGGAAATGATAAACTCACAAGAAACCATATCAAAGCA 876
Query 928 GTCTTAATGAATGTTCTTCTTGGAGGCATTGGA-ACTTCGGCTATAACAATGACATGGGC 986
|||| || ||||||||||| | || | | || ||||| || |||||||||||||||||
Sbjct 877 ATCTTGCTGGATGTTCTTCTT-GCGGGAATCGATACTTCTGCGATAACAATGACATGGGC 935
Query 987 AATGACAGAACTTATGAGAAACCCGCGAGTAATGAAGAAAGTTCAATCCGAAATCAGAAA 1046
||||||||||||| ||||| || ||||| ||||||||||||||||| ||||| ||||
Sbjct 936 AATGACAGAACTTGCAAGAAATCCACGAGTGATGAAGAAAGTTCAATCTGAAATAAGAAC 995
Query 1047 TCAAATTGGGG-GC-A-AG-TCAATGATCTGCTTGGATGACATAGACCAACTCCATTACC 1102
||||| ||||| | | || ||||||||| |||| || |||| ||| || ||| | |||
Sbjct 996 TCAAA-TGGGGAACAACAGATCAATGATCAGCTTTGAAGACACAGATCAGCTCGAGTACT 1054
Query 1103 TGAAAATGGTGATCAATGAAACATGGAGGCTACATCCTCCAGCACCACTTCTAG-TTCCA 1161
|||||||||||||||| ||||||||||||||||||||| || |||| ||||| | |||||
Sbjct 1055 TGAAAATGGTGATCAAAGAAACATGGAGGCTACATCCTACAACACCTCTTCT-GCTTCCA 1113
Query 1162 AGAGAAGTAATGTCTGAATTTGAAATCAACGGCTACACGATTCCAGCCAAGACAAGACTT 1221
||||||| ||||||||||||||| |||||||||||||||||||| | |||||| | |||
Sbjct 1114 AGAGAAGCAATGTCTGAATTTGATATCAACGGCTACACGATTCCTGTCAAGACTCGGCTT 1173
Query 1222 TATGTGAATGTATGGGGTATCGGGCGTGATCCAGATACTTGGAAAGATCCAGAGGAGTTT 1281
|||||||||| |||| ||| || |||||||| |||||||||||||| || || | ||||
Sbjct 1174 CATGTGAATGTTTGGGCTATTGGTCGTGATCCTGATACTTGGAAAGACCCTGAAGTGTTT 1233
Query 1282 CTTCCAGAGAGATTTGTTAACAGTAACATTGATGCAAAAGGACAAAACTTTGAGCTGTTA 1341
|| || ||||| ||| | | | |||||||||||||||||||| ||||||||| |||||
Sbjct 1234 CTCCCGGAGAGGTTTATGGATAACAACATTGATGCAAAAGGACAGAACTTTGAGTTGTTA 1293
Query 1342 CCATTTGGAAGTGGTAGGAGAATGTGTCCTGCCATGTACATGGGGACAACAATGGTGGAG 1401
|| ||||| | ||| | ||||| |||||||| || ||||||||||||||||||||||||
Sbjct 1294 CCGTTTGGTGGCGGTCGAAGAATCTGTCCTGCAATATACATGGGGACAACAATGGTGGAG 1353
Query 1402 TTTGGTCTAGCCAATCTCTTGTACCATTTTGACTGGAAATTACCAGAAGGCATGGTGGTC 1461
||||||||||| ||||||||||| |||||||| ||||| ||||||||||||| | ||||
Sbjct 1354 TTTGGTCTAGCTAATCTCTTGTATCATTTTGATTGGAAGTTACCAGAAGGCACGACGGTC 1413
Query 1462 GAAGACATTGACATGGAAGAATCTCCTGGACTCAATGCCAGCAAGAAAAATGAGCTTGTA 1521
||||| || |||||||||||| |||||||||||| || | ||||||||| |||||| ||
Sbjct 1414 GAAGATATCGACATGGAAGAAGCTCCTGGACTCACTGTGAACAAGAAAAACGAGCTTCTA 1473
Query 1522 CTTGT 1526
|||||
Sbjct 1474 CTTGT 1478
> Ahg346988 jgi|Araly1|346988|fgenesh1_pg.C_scaffold_5000380
Length=1503
Score = 1146 bits (620), Expect = 0.0
Identities = 1238/1529 (81%), Gaps = 72/1529 (5%)
Strand=Plus/Plus
Query 49 ATGGCT-ACTATTTGGTTTCTCCCActtctc-t--ttctc-tcttgtcttcttcttGCCG 103
|||||| || |||| | |||| ||||||| | || || |||| ||||||||| |||
Sbjct 1 ATGGCTAAC-ATTTTGATTCTATTACTTCTCTTCCTTATCATCTT-TCTTCTTCTCACCG 58
Query 104 -CTTTAAGACTC-AAGAAGCGGCGGCAACATCAACGGAAACCACCGTCTCCACCGGGCTT 161
||| || || | | ||||||| ||||| || || || ||| ||||| || || ||
Sbjct 59 CCTTCAA-ACGCGCA-AAGCGGCCGCAACTTCGAC--CAA-TACCCTCTCCTCCTGGTTT 113
Query 162 TCCGATCATCGGAAACTTGCATCAGCTTGGGGAGCTACCACATCAATCTCTATGG-AGTC 220
||| |||||||||||||| |||||||| || || ||||||||||| |||||||| || |
Sbjct 114 TCCTATCATCGGAAACTTACATCAGCTCGGAGAACTACCACATCAGGCTCTATGGAAG-C 172
Query 221 TCTCCAAA-AAATATGGTCCTGTAATGCTTTTGAAGTTTGGAAGTA-TCCCAACGGTTGT 278
||| |||| || ||||||||||| |||||||||||| |||||| | ||||||| | |
Sbjct 173 TCT-CAAAGAAGTATGGTCCTGTGATGCTTTTGAAGCTTGGAA-AAGTCCCAACAATCAT 230
Query 279 TGTCTCTTCTTCTGAAACAGC-AAAGCAAGCTCTGAA-A-ATCCATGACCTCAATTGTTG 335
| ||||| || |||||||| ||| |||||||| || | | |||||| ||| |||||||
Sbjct 231 ACTTTCTTCCTCCGAAACAGCGAAA-CAAGCTCT-AAGAGA-CCATGATCTCCATTGTTG 287
Query 336 TAGCCGTCCAAGCTTAGCAGGACCAAGAGCGCTCTCTTACAACTACTTGGACATAGT-TT 394
||||||||| ||||||||| ||||| ||||||||||||| || ||||||| | ||
Sbjct 288 TAGCCGTCCTTCCTTAGCAGGGGGAAGAGAGCTCTCTTACAACAACCGGGACATA-TCTT 346
Query 395 TCTCTCCTTTTAATGATTACTGGAAAGAATTGAGGAGGATGTGT-GTGCAAGAGCTTTTC 453
||||||||| |||||||||||||||||| | |||| | | ||| | |||||||| |||
Sbjct 347 TCTCTCCTTACAATGATTACTGGAAAGAACTAAGGAAGCTCTGTACT-CAAGAGCTCTTC 405
Query 454 AGTCCTAAACAAGT-T-CATTTGATTCAACCCATCAGGGAAGAGGAAGTCAAGAAACTGA 511
||| ||||| || | | || | | ||||| ||||| ||| ||||| |||||||||||||
Sbjct 406 AGTGCTAAA-AA-TATACACTCAACTCAACACATCAAGGACGAGGAGGTCAAGAAACTGA 463
Query 512 T-GAATTCATTCTCGGAATCAGCTGC-TCAGAAAACTCCGGTTAACTTGAGCGAGAAGTT 569
| | ||| | || ||||||||||| | | | || ||||| |||||||||| | |||||||
Sbjct 464 TCG-ATTTAATCGCGGAATCAGCTTCTTTA-AAGACTCCAGTTAACTTGAACAAGAAGTT 521
Query 570 AGCTT-CTTTAACTGTTGGCGTGA-TATGCAAGG-CAGCATTTGGTGTGAGTTTCCAAGG 626
||| |||||||||| | | | |||| ||| ||| ||||||||||||||| | ||
Sbjct 522 -TCTTGCTTTAACTGTAAGTAT-AGTATG-TAGGACAGGATTTGGTGTGAGTTTTGAGGG 578
Query 627 AACTGTGCTTAATAGTGACA-ACTTCGACAAGTTAATCCATGATGCATTTTTGTTCTTGG 685
||||||||||| ||||||| | ||| | || || ||| ||| ||||| | | ||||
Sbjct 579 AACTGTGCTTAGCAGTGACAGA-TTCAATAAAATAGTCCGTGAAGCATTCGAGATGTTGG 637
Query 686 GGAGCTTCTCTGCCT-CGGATTATT-TTCCAAATGTCGGCTGGATCATCGACTGGCTCAC 743
| || ||||||| || | |||| || |||| | | || |||||||||||| || ||||
Sbjct 638 GAAGTTTCTCTG-CTACAGATT-TTATTCCGTACATAGGTTGGATCATCGACCGGTTCAC 695
Query 744 GGGGTTACAAGGGCAGAGAGAGAGAAGTGTGAGAGGTCTTGACGCATTCTATGAACAAAT 803
|| || ||||||| |||||| | ||| ||| ||| |||||| ||||||||||||||| |
Sbjct 696 TGGTTTGCAAGGGCGGAGAGAAAAAAGCGTGCGAGATCTTGATGCATTCTATGAACAAGT 755
Query 804 GT-TTGATCTACATAAACAGGGGAACAAAGAAGG-AGTTGAGGATTTTGTGGACTTGCTC 861
| ||||||| |||||| ||| || || ||| || ||| |||||||| |||||||||
Sbjct 756 -TATTGATCTGCATAAAGAGGAAAAGGAACTAGGAAG-TGAAGATTTTGTTGACTTGCTC 813
Query 862 TTGAAG-TTGGAGAAAGAAGAAACTGTTCTTGGATATGGCAAGCTCACAAGAAACCATAT 920
|| ||| ||||||||||||||| |||| ||||| || ||| ||||||||||| ||||
Sbjct 814 TT-AAGATTGGAGAAAGAAGAAGTTGTTGTTGGAAATAATAAGTTCACAAGAAACAATAT 872
Query 921 CAAAGCAGTCTTAATGAATGTTCTTCTT-G-GAGGCATTGGAACTTCGGCTA-TAACAAT 977
|||||| |||| ||| | ||||| || | | || || | |||||| || | ||| ||
Sbjct 873 TAAAGCAATCTTGATGGACATTCTT-TTAGCG-GGAATAGAAACTTCCGC-AGAAACCAT 929
Query 978 GACATGGGCAATGACAGAACTTATGAGAAACCCGCGAGTAATGAAGAAAGTTCAATCCGA 1037
||||||||| ||| |||||||| ||| || || ||||||||| |||||||||||||||
Sbjct 930 GACATGGGCGATGGCAGAACTTGCGAGGAATCCACGAGTAATGGGGAAAGTTCAATCCGA 989
Query 1038 AATCAGAAATCA-AATTGGGGGCAAGTCAA-TGATCTGCTTGGATGACATAGACCAACTC 1095
|||| |||| || | || || | || || | ||| |||| || |||||||| || |||
Sbjct 990 AATCCGAAA-CATATTTAGGAAC-AGAGAACTAATCAGCTTCGAAGACATAGAGCAGCTC 1047
Query 1096 CATTACCTGAAAATGGTGATCAATGAAACATGGAGGCTACATCCTCCAGCACCACTTCTA 1155
|||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 1048 CATTACCTGAAAATGGTGATTAAAGAAACATGGAGGCTACATCCTCCAGCACCTCTTCTT 1107
Query 1156 GTTCCAAGAGAAGTAATGTCTGAATTTGAAATCAACGGCTACACGATTCCAGCCAAGACA 1215
| |||||||||||||||||||| ||||| ||||||||||||||||| | | ||||||||
Sbjct 1108 CTCCCAAGAGAAGTAATGTCTGAGTTTGAGATCAACGGCTACACGATGCAACCCAAGACA 1167
Query 1216 -AGACTTTATGTGAATGTATGGGGTATCGGGCGTGAT-CCAGATACTTGGAAAGATCCAG 1273
||| || |||| |||||||||| ||||||||||||| ||| ||||||||||||| ||||
Sbjct 1168 CAGA-TTCATGTCAATGTATGGGCTATCGGGCGTGATCCCA-ATACTTGGAAAGACCCAG 1225
Query 1274 AGGAGTTTCTTCCAGAGAGATTTGTTAACAGTAACATTGATGCAAAAGGACAAAACTTTG 1333
|||||||| |||| ||||| ||| || | |||||||||||| |||||||||| |||||||
Sbjct 1226 AGGAGTTTATTCCCGAGAGGTTTATTGATAGTAACATTGATACAAAAGGACAGAACTTTG 1285
Query 1334 AGCTGTTACCATTTGGAAGTGGTAGGAGAATGTGTCCTGCCATGTACATGGGGACAACAA 1393
|| ||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1286 AGTTGTTACCGTTTGGAGGCGGTAGGAGAATGTGTCCTGCCATGTACATGGGGACAACAA 1345
Query 1394 TGGTGGAGTTTGGTCTAGCCAATCTCTTGTACCATTTTGACTGGAAATTACCAGAAGGCA 1453
|||||||||||||||| || ||||| ||||| |||||||||||||| |||||||||||||
Sbjct 1346 TGGTGGAGTTTGGTCTTGCGAATCTTTTGTATCATTTTGACTGGAAGTTACCAGAAGGCA 1405
Query 1454 TGGTGGTCGAAGACATTGACATGGAAGAATCTCCTGGACTCAATGCCAGCAAGAAAAATG 1513
||| ||||||||| || |||||||||||| |||||||||||| || || |||||||||||
Sbjct 1406 TGGCGGTCGAAGATATCGACATGGAAGAAGCTCCTGGACTCACTGTCAACAAGAAAAATG 1465
Query 1514 AGCTTGTACTTGTTCCTAG-GAAGTATTT 1541
| ||||||||||| || || |||||||||
Sbjct 1466 ACCTTGTACTTGTACC-AGAGAAGTATTT 1493
> Ahg346994 jgi|Araly1|346994|fgenesh1_pg.C_scaffold_5000386
Length=1218
Score = 291 bits (157), Expect = 1e-77
Identities = 261/310 (84%), Gaps = 12/310 (4%)
Strand=Plus/Plus
Query 1239 TATCGGGCGTGATCCAGA-TACTTGGAAAGATCCAGAGGA-GTTTCTT-CCAGAGAGATT 1295
||||||||||||||| || | | ||||||||| |||| | |||| || || || || ||
Sbjct 906 TATCGGGCGTGATCCCGAGT-CCTGGAAAGATGCAGA-TACGTTT-TTCCCGGAAAGGTT 962
Query 1296 TGT-TAACAGTAACATTGATGCAAAAGGACAAAACTTTGAGCTGTTACCATTTGGAAGTG 1354
| | || | |||||||||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct 963 TATGGAA-AATAACATTGATGCTAAAGGACAGAACTTTGAGCTGTTACCGTTTGGAAGTG 1021
Query 1355 GTAGGAGAATGTGTCCTGCCATGTACATGGGGACAACAATGGTGGAGTTTGGTCTAGCCA 1414
| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct 1022 GCCGGAGAATCTGTCCTGGAATGTACATGGGGACAACAATGGTGGAGTTTGGTCTGGCGA 1081
Query 1415 ATCT-CTTGTACCATTTTGACTGGAAATTACCAGAAGGCATGGTGGTCGAAGACATTGAC 1473
|| | | |||| || ||||| ||| ||||||||||||| |||||||||||||| ||||||
Sbjct 1082 ATATGC-TGTATCAATTTGATTGGGAATTACCAGAAGGTATGGTGGTCGAAGATATTGAC 1140
Query 1474 ATGGAAGAATCTCCTGGACTCAATGCCAGCAAGAAAAATGAGCTTGTACTTGTTCCTAGG 1533
||||||||||||||||||||| || |||| |||||||||||| | |||||||| |
Sbjct 1141 ATGGAAGAATCTCCTGGACTCGCTGTGGGCAAAAAAAATGAGCTTCTGCTTGTTCCC-GT 1199
Query 1534 -AAGTATTTA 1542
|||||||||
Sbjct 1200 CAAGTATTTA 1209
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 60677760285
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5