BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G27020.1
Length=2471
Score E
Sequences producing significant alignments: (Bits) Value
Ahg936422 jgi|Araly1|936422|scaffold_500613.1 3463 0.0
Ahg493877 jgi|Araly1|493877|fgenesh2_kg.7__3310__AT5G41000.1 1834 0.0
Ahg937017 jgi|Araly1|937017|scaffold_501208.1 289 8e-77
Ahg473974 jgi|Araly1|473974|fgenesh2_kg.1__3928__AT1G48370.1 87.9 3e-16
> Ahg936422 jgi|Araly1|936422|scaffold_500613.1
Length=2076
Score = 3463 bits (1875), Expect = 0.0
Identities = 2005/2070 (97%), Gaps = 0/2070 (0%)
Strand=Plus/Plus
Query 119 CATTGAATTAGCTAAAACATGGGGACGGAGATCCCTAGATCGGCGGAGATATCAGAGGCA 178
||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 7 CATTGAATTAGCTTAAACATGGGGACGGAGATCCCTAGATCGGCGGAGATATCGGAAGCA 66
Query 179 TTGTTACCACCGGAATCTGAGAAAACCGTGACGGCGACGGAGGAGCATGTACCTGAGTGG 238
|||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 67 TTGTTACCGTCGGAATCTGAGAAAACCGCGACGGCGGCGGAGGAGCATGTACCTGAGTGG 126
Query 239 AAAGAGCAGATAACGATTCGAGGATTAACCGTGAGTGCGTTGCTCGGGACTTTGTTCTGT 298
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 127 AAAGAGCAGATAACGATACGAGGATTGACCGTGAGTGCGTTGCTCGGGACTTTGTTCTGT 186
Query 299 ATCATTACTCATAAACTAAATCTGACGGTTGGAATCATCCCGTCGTTGAACGTCGCTGCG 358
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 187 ATCATTACTCATAAACTCAATCTGACGGTTGGAATCATTCCGTCGTTGAACGTCGCTGCG 246
Query 359 GGATTACTCGGTTTCTTCTTCGTTAAGTCGTGGACTGGTTTCTTATCGAAGCTAGGGTTT 418
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 GGATTACTCGGATTCTTCTTCGTTAAGTCGTGGACTGGTTTCTTATCGAAGCTAGGGTTT 306
Query 419 ACAGTGAAGCCTTTCACTAAGCAAGAGAACACCGTTATTCAGACTTGTGTTGTCGCTTGC 478
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 307 ACAGTGAAGCCTTTCACTAAACAAGAGAACACCGTTATTCAGACTTGTGTTGTTGCTTGC 366
Query 479 TATGGCCTCGCCTTTAGCGGAGGATTTGGTTCATATTTGATTGCTATGGATGAGAAGACA 538
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 367 TATGGCCTTGCCTTCAGCGGAGGATTTGGTTCATATTTGATTGCTATGGATGAGAAGACA 426
Query 539 TATAAGCTCATTGGTGCTGATTATCCTGGAAACCATGCAGAAGATGTTATAAATCCAGGA 598
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 427 TATAAGCTCATTGGTGCTGATTATCCTGGAAACCATGCTGAAGATGTTATAAATCCAGGA 486
Query 599 TTGTGGTGGATGATTGGGTTTTTATTTGTAGTCAGCTTCTTGGGACTCTTTAGTCTCGTT 658
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 487 TTGTGGTGGATGATTGGGTTTTTATTTGTAGTCAGCTTCTTGGGGCTCTTTAGTCTTGTT 546
Query 659 CCGTTACGCAAGGTGATGGTTTTGGACTACAAACTTACTTATCCTAGTGGAACCGCCACA 718
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 547 CCGTTACGCAAGGTGATGGTTTTGGACTACAAACTTACTTATCCCAGTGGGACCGCCACA 606
Query 719 GCAATGTTGATTAATAGCTTCCACACCAACACTGGAGCTGAGCTTGCAGGGAACCAGGTT 778
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 607 GCAATGTTGATTAACAGCTTCCACACCAACACTGGAGCTGAGCTTGCAGGGAATCAGGTT 666
Query 779 AAATGTCTTGGAAAATACCTGAGCCTTAGCTTAATTTGGAGTTGTTTCAAATGGTTCTTC 838
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 667 AAATGTCTTGGAAAATACCTGAGCCTTAGCTTAATTTGGAGTTGTTTCAAGTGGTTCTTC 726
Query 839 AGTGGTATTGGAGATGCATGTGGATTTGATAACTTCCCCACCCTTGGTTTGACGTTATTC 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 727 AGTGGTATTGGAGATGCATGTGGATTTGATAACTTCCCCACCCTTGGTTTGACGCTATTC 786
Query 899 AAGAACACGTTTTACTTTGACTTCAGTCCTACTTATATTGGATGCGGCCTTATATGCCCC 958
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 787 AAGAACACGTTTTACTTTGACTTCAGTCCTACTTATATTGGATGCGGTCTTATATGCCCC 846
Query 959 CATATAGTGAACTGCTCGGTTCTTCTCGGTGCGATCATTTCTTGGGGGATTCTATGGCCA 1018
||||||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||
Sbjct 847 CATATAGTGAACTGCTCAGTTCTTCTTGGTGCGATCATCTCTTGGGGGATTCTGTGGCCA 906
Query 1019 TTTGTATCACAGCATGCTGGGGATTGGTATCCTGCTGACCTTGGGTCCAACGATTTCAAA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 TTTGTATCACAGCATGCTGGGGATTGGTATCCTGCTGACCTTGGGTCCAACGATTTCAAA 966
Query 1079 GGTCTCTACGGGTATAAGGTCTTTATCGCCATTGCCATTATCCTTGGTGATGGTCTTTAC 1138
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 967 GGTCTCTACGGGTATAAGGTCTTTATCGCCATTGCCATTATCCTTGGTGACGGTCTTTAC 1026
Query 1139 AATCTTGTCAAGATCATCGCTGTCACTGTGAAGGAATTATGCAGCAGCAGGTCTAGACGA 1198
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 1027 AATCTTGTCAAGATCATCGCTGTCACTGTGAAGGAAATATGCAGCAGTAGGTCTAGACGA 1086
Query 1199 CTCAATCTACCCATTGTTACCGACGGTGTAGATGACAGTGAAGCTTCTGAGATACTGCTG 1258
||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||
Sbjct 1087 CTCAATCTACCCATTGTTACCGACGTTGTAGATGACAGCGAAGCCTCTGAGATACTGCTG 1146
Query 1259 GTGAAGAAGAAAAGAGATGAAGTGTTTCTGAAGGACCGTATACCCCTTGAATTTGCGATT 1318
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct 1147 GTGAAGAAGAAAAGAGATGAAGTATTTCTGAAGGACCGTATACCCCTTGAATTTGCGGTT 1206
Query 1319 GCTGGTTATGTGGGTCTTGCAGCTATCTCAACTGCCACAATCCCAATAATATTTCCACCA 1378
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1207 GCTGGTTATGTGGGTCTTGCAGCAATCTCAACTGCCACAATCCCAATAATATTTCCACCA 1266
Query 1379 CTGAAATGGTACTTTGTCCTGTGTTCTTATTTCATTGCACCCGCTCTCGCCTTCTGCAAC 1438
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1267 TTGAAATGGTACTTTGTCCTGTGTTCTTATTTCATTGCACCTGCTCTTGCCTTCTGCAAC 1326
Query 1439 TCTTATGGAACGGGGCTCACAGACTGGAGCCTAGCATCAACCTATGGAAAGATCGGTCTT 1498
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1327 TCTTATGGAACGGGGCTCACAGACTGGAGCTTAGCATCAACCTATGGAAAGATCGGTCTT 1386
Query 1499 TTCATAATCGCTTCCGTTGTAGGAAGTGATGGTGGTGTCATTGCGGGTTTAGCTGCCTGT 1558
|||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1387 TTCATAATCGCTTCAGTAGTAGGAAGTGATGGTGGTGTCATTGCGGGTCTAGCTGCCTGT 1446
Query 1559 GGTGTTATGATGTCAATCGTCTCCACCGCAGCTGATCTCATGCAAGACTTCAAAACAGGT 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1447 GGTGTTATGATGTCAATCGTCTCCACCGCAGCTGATCTCATGCAAGACTTCAAAACAGGT 1506
Query 1619 TACCTCACTTTATCATCTGCAAAGTCCATGTTTGTAAGCCAGCTCGTGGGAACCGCAATG 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1507 TACCTCACTTTATCATCTGCAAAGTCCATGTTTGTAAGCCAGCTCGTGGGAACCGCAATG 1566
Query 1679 GGCTGTGTAATCGCTCCACTCACATTCTGGCTGTTCTGGACTGCCTTTGACATTGGAGAT 1738
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1567 GGCTGTGTAATTGCTCCGCTCACATTCTGGCTGTTCTGGACTGCCTTTGACATTGGAGAT 1626
Query 1739 CCCAATGGTCCGTACAAAGCACCTTACGCAGTGATTTTCCGTGAAATGGCGATTCTCGGA 1798
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627 CCCAATGGTCCCTACAAAGCACCTTACGCAGTGATTTTCCGTGAAATGGCGATTCTCGGT 1686
Query 1799 ATTGAGGGCTTTGCTGAATTGCCTAAGCACTGTTTGGCTCTTTGTTACGGGTTTTTCATA 1858
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 ATTGAGGGCTTTGCTGAACTGCCTAAGCACTGTTTGGCTCTTTGTTACGGGTTTTTCATT 1746
Query 1859 GCAGCTTTGATTGTGAATCTCTTAAGAGATATTACACCGCCTAAGATCTCTCAGTTCATC 1918
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1747 GCAGCTTTGATTGTGAATCTCTTAAGAGATATTACACCACCTAAAATCTCTCAGTTCATC 1806
Query 1919 CCGATCCCAATGGCAATGGCTGTCCCATTCTACATTGGAGCTTACTTCGCCATTGACATG 1978
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1807 CCGATCCCAATGGCAATGGCTGTCCCATTCTACATTGGAGCTTACTTTGCCATTGACATG 1866
Query 1979 TTTGTTGGGACTGTGATATTGTTCGTATGGGAACGGATCAACAGGAAAGATGCAGAGGAC 2038
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||
Sbjct 1867 TTTGTTGGGACTGTGATATTGTTCATATGGGAGCGGATCAACAGGAAAGATGCAGACGAC 1926
Query 2039 TTTGCAGGTGCAGTAGCATCAGGACTGATCTGTGGTGATGGGATCTGGACTATACCATCC 2098
||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||||
Sbjct 1927 TTTGCGGGTGCAGTAGCATCAGGACTGATCTGTGGGGATGGGATCTGGACAATTCCATCC 1986
Query 2099 GCAATCCTTTCAATCTTAAGGATCAACCCTCCCATTTGTATGTACTTTGGACCGTCCTCA 2158
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1987 GCAATCCTTTCGATCTTAAGGATCAACCCTCCCATTTGTATGTACTTTGGACCGTCCTCA 2046
Query 2159 GCAAGATAGAGATGCCACTGTGGTCATAAT 2188
||||| || |||||||||||||||||||||
Sbjct 2047 GCAAGGTAAAGATGCCACTGTGGTCATAAT 2076
> Ahg493877 jgi|Araly1|493877|fgenesh2_kg.7__3310__AT5G41000.1
Length=2100
Score = 1834 bits (993), Expect = 0.0
Identities = 1644/1957 (84%), Gaps = 50/1957 (3%)
Strand=Plus/Plus
Query 225 ATGTACCTGAGTGGAAAGAGCAGATAACGATTCGAGGATTAA-C-CGTGAGTGCGTTGCT 282
||||||| |||||||| || ||||| ||||| ||||| |||| | | | || || ||| |
Sbjct 133 ATGTACCCGAGTGGAAGGACCAGATCACGATCCGAGGCTTAATCTC-T-AGCGCCTTGTT 190
Query 283 CGGGACTTTGTTCTGTATCATTACTCATAAACTAAATCTGACGGTTGGAATCATCCCGTC 342
|||| |||||||||||||||||| ||||| || ||||| || | |||||||| || ||
Sbjct 191 AGGGATTTTGTTCTGTATCATTACCCATAAGCTCAATCTAACAATCGGAATCATTCCTTC 250
Query 343 GTTGAACGTCGCTGC-GGGATTACTCGGTTTCTTCTTCGTTAAGTCGTGGACTGGTTTCT 401
| | ||||| ||||| || || ||||| ||||||||| | |||||||||||||| ||||
Sbjct 251 GCTAAACGTAGCTGCTGGTCTT-CTCGGCTTCTTCTTCATCAAGTCGTGGACTGGGTTCT 309
Query 402 TATCGAAGCTAGGGTTTACA-GTGAAGCCTTTCACTAAGCAAGAGAACACCGTTATTCAG 460
| || || |||||||| || | || ||||| ||||||||||||||||| |||||||||
Sbjct 310 TGTCTAAATTAGGGTTTTCATCTAAACCCTTT-ACTAAGCAAGAGAACACTGTTATTCAG 368
Query 461 ACTTGTGTTGTCGCTTGCTATGGCCTCGCCTT-TAGCGGAGGATTTGGTTCATATTTGAT 519
|||||||||||| | || || ||||| | ||| |||||||||||||||||||||||||||
Sbjct 369 ACTTGTGTTGTCTCCTGTTACGGCCTTG-CTTATAGCGGAGGATTTGGTTCATATTTGAT 427
Query 520 TGCTATGGATGAGAAGACATATAAGCTCATTGGTGCTGATTATCCTGGAAACCATGCAGA 579
||||||||||| | ||||||||||||||||||| ||||||||||||||||| || | ||
Sbjct 428 AGCTATGGATGATAGGACATATAAGCTCATTGGTTCTGATTATCCTGGAAACAATCCTGA 487
Query 580 AGATGTTATAAATCCAGGATTGTGGTGGATGATTGGGTTTTTATTTGTAGTCAGCTTCTT 639
||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| |
Sbjct 488 AGATGTTATAAATCCTGGATTGTGGTGGATGACTGGGTTTTTATTTGTAGTTAGCTTCCT 547
Query 640 GGGACTCTTTAGTCTCGTTCC-GTTACGCAAGGTGATGGTTTTGGACTACAAACTTACTT 698
|| ||||| ||||||||||| || || ||||||||| ||||||||||||| ||||| |
Sbjct 548 CGGTCTCTTCAGTCTCGTTCCACTT-CGTAAGGTGATGATTTTGGACTACAAGCTTACAT 606
Query 699 ATCCTAGTGGAACCGCCACAGCAATGTTGATTAATAGCTTCCACACCAACACTGGAGCTG 758
|||| ||||||||||| ||||| ||||||||||| || ||||||| ||||||||||||||
Sbjct 607 ATCCCAGTGGAACCGCTACAGCGATGTTGATTAACAGTTTCCACAACAACACTGGAGCTG 666
Query 759 AGCTTGCAGGGAACCAGGTTAAATGTCTTGGAAAATACCTGAGCCTTAGCTTAATTTGGA 818
|||||||||| ||||| |||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 667 AGCTTGCAGGAAACCAAGTTAAATGTCTTGGGAAATACCTGAGCCTTAGCTTATTTTGGA 726
Query 819 GTTGTTTCAAATGGTTCTTCAGTGGTATTGGAGATGCATGTGGATTTGATAACTTCCCCA 878
|||| ||||| |||||||||||||||||||||||||||||||| |||||| |||| ||||
Sbjct 727 GTTGCTTCAAGTGGTTCTTCAGTGGTATTGGAGATGCATGTGGCTTTGATCACTTTCCCA 786
Query 879 CCCTTGGTTTGACGTTATTCAAGAACACGTTTTACTTTGACTTCAGTCCTACTTATATTG 938
| |||||||||||| | ||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 787 CACTTGGTTTGACGCTGTTCAAGAACACGTTTTACTTTGATTTCAGTCCTACTTTTATTG 846
Query 939 GATGCGGCCTTATATGCCCCCATATAGTGAACTGCTCGGTTCTTCTCGGTGCGATCATTT 998
|||| || | ||||| |||||| | |||||||| ||||||||||||||||| |||||||
Sbjct 847 GATGTGGTATGATATGTCCCCATTTGGTGAACTGTTCGGTTCTTCTCGGTGCTATCATTT 906
Query 999 CTTGGGGGATTC-TATGGCCATTTGTATCACAGCATGCTGGGGATTGGTATCCTGCTGAC 1057
||||||| ||| | ||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 907 CTTGGGGT-TTCCTCTGGCCATCCATATCACAGCATGCTGGGGATTGGTATCCAGCTGAC 965
Query 1058 CTTG-GGTCCAACGATTTCAAAGGTCTCTACGGGTATAAGGTCTTTATCGCCATTGCCAT 1116
|||| || |||| ||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 966 CTTGAGG-CCAATGATTTCAAAGGTCTCTATGGATATAAGGTCTTTATCGCCATTGCTAT 1024
Query 1117 TATCCTTGGTGATGGTCTTTACAATCTTGTCAAGATCATCGCTGTCACTGTGAAGGAATT 1176
||||||||||| ||||||||||| || | |||||||| |||||||||||||||| |
Sbjct 1025 CATCCTTGGTGACGGTCTTTACAACCTCATTAAGATCATTATTGTCACTGTGAAGGAAAT 1084
Query 1177 ATGCAGCAGCAGGTCTAGACGACT-CAATCTACCCAT-TGTTACCGACGGTGTAGATGAC 1234
|||| || || || | || || || ||||| | | |||||||| | ||||| |
Sbjct 1085 CTGCAACAAAAGCTCCAAACAACAACAC-CTACCTGTCT-TTACCGACATTTTAGATAAA 1142
Query 1235 AGTGAAG-CTTCTGAGAT-ACTGCTGGTGAAGAAGAAAAGAGATGA-AGTGTTTCTGAAG 1291
|| ||| | || || || | ||| || |||||||||||||||||| | | ||||| |||
Sbjct 1143 AGC-AAGACCTCAGA-ATTAATGCGGGAGAAGAAGAAAAGAGATGACA-TATTTCTCAAG 1199
Query 1292 GACCGTATACCCCTTGAATTTGCGATTGCTGGTTATGTGGGTCTTGCAGCTATCTCAACT 1351
|||||||||||||| || |||||| || |||||||||||||||||||||| || ||||||
Sbjct 1200 GACCGTATACCCCTCGAGTTTGCGGTTTCTGGTTATGTGGGTCTTGCAGCCATTTCAACT 1259
Query 1352 GCCACAATCCCAATAATATTTCCACCACTGAAATGGTACTTTGTCCTGTGTTCTTATTTC 1411
|| | ||||||| | ||||| |||||| ||||||||||||||||||| ||| | || ||
Sbjct 1260 GCTATAATCCCATTGATATTCCCACCATTGAAATGGTACTTTGTCCTCTGTACATACTT- 1318
Query 1412 A-TTGCACCCGC-TCTCGCCTTCTGCAACTCTTATGGAACGGGGCTCACAGAC-TGGAGC 1468
| |||| |||| ||| || || ||||| ||||||||| | |||||||| || || |||
Sbjct 1319 AGTTGC-CCCGGGTCTTGCTTTTTGCAATTCTTATGGAGCCGGGCTCACGGATATG-AGC 1376
Query 1469 CTAGCAT-CAACCTATGGAAAGA-TCGGTCTTTTCATAATCGCTTCCGTTGTAGGAAGTG 1526
| || | ||||||| ||||||| | ||||||||||| | ||||| ||||||||| |
Sbjct 1377 AT-GCCTTCAACCTACGGAAAGACT-GGTCTTTTCATCGTTGCTTCAATTGTAGGAAATA 1434
Query 1527 ATGGTGGTGTCATTGCGGGTTTAGCTGCCTGTGGTGTTATGATGTCAATCGTCTCCACCG 1586
| ||||| |||||||| |||||||| |||||||| ||||||||||||||||||| || |
Sbjct 1435 ACGGTGGAGTCATTGCCGGTTTAGCAGCCTGTGGCATTATGATGTCAATCGTCTCAACTG 1494
Query 1587 CAGCTGATCTCATGCAAGACTTCAAAACAGGTTACCTCACTTTATCATCTGCAAAGTCCA 1646
|||| ||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||
Sbjct 1495 CAGCGGATCTCATGCAGGACTTTAAAACAGGTTACCTCACACTATCATCTGCAAAATCCA 1554
Query 1647 TGTTTGTAAGC-CAGCTCGTGGGAACCGCAATGGGCTGTGTAATCGCTCCACTCACATTC 1705
||||||||| | ||||| |||| || |||||||| || ||||||| || ||||| |||
Sbjct 1555 TGTTTGTAA-CTCAGCTTTTGGGTACAGCAATGGGTTGCATAATCGCCCCTCTCACGTTC 1613
Query 1706 TGGCTGTTCTGGACTGCCTTTGACATTGGAGATCCCAATGGTCCGTACAAAGCACCTTAC 1765
|||||||| |||||||| ||||||||||||||||| |||||| |||||||||||||||
Sbjct 1614 TGGCTGTTTTGGACTGCTTTTGACATTGGAGATCCTGATGGTCTATACAAAGCACCTTAC 1673
Query 1766 GCAGTGATTTTCCGTGAAATGGCGATTCTCGGAATTGAGGGCTTTGCTGAATTGCCTAAG 1825
||||| || | ||| |||||||| || ||||| || ||||||||| | || |||| |||
Sbjct 1674 GCAGTTATCTACCGCGAAATGGCTATCCTCGGGATCGAGGGCTTTACAAAACTGCCCAAG 1733
Query 1826 CACTGTTTGGCTCTTTGTTACGGGTTTTTCATAGCAGCTTTGATTGTGAATCTC-TTAAG 1884
|||||||||||||| |||| ||| || ||||| || || ||||||| ||||| ||| |
Sbjct 1734 CACTGTTTGGCTCTATGTTGCGGATTCTTCATCGCTTCTCTGATTGTAAATCTAATTA-G 1792
Query 1885 AGATATTACACCGCCTAAGATCTCTCAGTTCATCCCGA-TCCCAATGGCAATGGCTG-TC 1942
||| || ||||| || ||||||||| |||| || || | | |||||||| ||||||| ||
Sbjct 1793 AGAAATCACACCACCAAAGATCTCTAAGTTAATACC-ACTTCCAATGGCTATGGCTGGTC 1851
Query 1943 CCATTCTACATTGGAGCTTACTTCGCCATTGACATGTTTGTTGGGACTGTGAT-ATTGTT 2001
| ||| ||||| ||||| |||||| |||| |||||||| | || || ||||| || |||
Sbjct 1852 C-ATTTTACATAGGAGCATACTTCACCATCGACATGTTCATAGGAACCGTGATTAT-GTT 1909
Query 2002 CGTATGGGAACGGATCAACAGGAAAGATGCAGAGGACTT--TGCAGGTGCAGTAGCATCA 2059
||||||||||||||| || | |||||| ||||| || || | | ||||||||||| |||
Sbjct 1910 CGTATGGGAACGGATGAATAAGAAAGACGCAGATGA-TTACT-CGGGTGCAGTAGCTTCA 1967
Query 2060 GGACTGATCTGTGGTGATGGGATCTGGACTATACCATCCGCAATCCTTTCAATCTTAAGG 2119
||||||||||| || ||||| |||||||| || ||||||||| | |||||||| |||||
Sbjct 1968 GGACTGATCTGCGGCGATGGAATCTGGACCATCCCATCCGCAGTTCTTTCAATATTAAGA 2027
Query 2120 ATCAACCCTCCCATTTGTATGTACTTTGGACCGTCCT 2156
||||| || ||||| ||||||||||||||||| ||||
Sbjct 2028 ATCAATCCACCCATCTGTATGTACTTTGGACCATCCT 2064
> Ahg937017 jgi|Araly1|937017|scaffold_501208.1
Length=1334
Score = 289 bits (156), Expect = 8e-77
Identities = 204/228 (89%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 807 GCTTAATTTGGAGTTGTTTCAAATGGTTCTTCAGTGGTATTGGAGATGCATGTGGATTTG 866
||||| |||||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 272 GCTTAGTTTGGAGTTGCTTCAAGTGGTTCTTCAGTGGTATTGGAGATGCATGTGGGTTTG 331
Query 867 ATAACTTCCCCACCCTTGGTTTGACGTTATTCAAGAACACGTTTTACTTTGACTTCAGTC 926
|| |||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 332 ATCACTTTCCCACACTTGGTTTGACGCTATTCAAGAACACGTTTTACTTTGATTTCAGTC 391
Query 927 CTACTTATATTGGATGCGGCCTTATATGCCCCCATATAGTGAACTGCTCGGTTCTTCTCG 986
|||||| ||||||||| || | ||||| |||||| | |||||||| ||||| |||||||
Sbjct 392 CTACTTTTATTGGATGTGGTATGATATGTCCCCATTTGGTGAACTGTTCGGTCCTTCTCG 451
Query 987 GTGCGATCATTTCTTGGGGGATTCTATGGCCATTTGTATCACAGCATG 1034
|||| |||||||||||||| |||| ||||||||| ||||||||||||
Sbjct 452 GTGCTATCATTTCTTGGGGTTTTCTCTGGCCATTTATATCACAGCATG 499
> Ahg473974 jgi|Araly1|473974|fgenesh2_kg.1__3928__AT1G48370.1
Length=2345
Score = 87.9 bits (47), Expect = 3e-16
Identities = 62/69 (90%), Gaps = 2/69 (3%)
Strand=Plus/Plus
Query 440 CAAGAGAACACCGTTATTCAGACTTGTGTTGTCGCTTGCT-ATGGCCTCGCCTTTAGCGG 498
|||||||||||||||||||||||||||||||| |||| || | || | |||||||||||
Sbjct 451 CAAGAGAACACCGTTATTCAGACTTGTGTTGTTGCTTCCTCA-GGAATTGCCTTTAGCGG 509
Query 499 AGGATTTGG 507
|||||||||
Sbjct 510 AGGATTTGG 518
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 93130649025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5