BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G27330.1 Length=2871 Score E Sequences producing significant alignments: (Bits) Value Ahg484521 jgi|Araly1|484521|fgenesh2_kg.5__513__AT3G27330.1 4209 0.0 Ahg493908 jgi|Araly1|493908|fgenesh2_kg.7__3341__AT5G40720.1 965 0.0 > Ahg484521 jgi|Araly1|484521|fgenesh2_kg.5__513__AT3G27330.1 Length=2881 Score = 4209 bits (2279), Expect = 0.0 Identities = 2697/2896 (93%), Gaps = 40/2896 (1%) Strand=Plus/Plus Query 1 ACTCTTCTCATCATCCaaaaccagaaactttgaccggaaaagaatcagagaagtaaagaa 60 |||||| ||||||||| ||| ||||||||||||| |||||||||| |||||||| | | Sbjct 1 ACTCTTATCATCATCC-AAA-CAGAAACTTTGACTGGAAAAGAATTAGAGAAGT--TG-A 55 Query 61 aaacagaacaaa--attaaaacAGAATTTCTT-CT-CT-AATCCATTACGCCGGCGATTT 115 ||| |||| ||| ||| ||| || | || || | | ||||||||||||| Sbjct 56 AAA-AGAA-AAATCTTTACTTTTTCTTTTGTTGTTACTGAAACTAAAACGCCGGCGATTT 113 Query 116 CGGCGGCGTAGGAGATGAAAGTTCGTAGGAAACTTGGTGGTGGTTGCGGCGGAGACGTCG 175 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 114 CGGCGGCGTAGGAGATGAAGGTTCGTAGAAAACTTGGTGGTGGTTGCGGCGGAGACGTCG 173 Query 176 TTGTTTCATGGCGGACGTTCTTTTGGTTCGTGATTCTGTTTGTCTTCTCCTTCGTTCTCT 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 174 TTGTTTCATGGCGGACGTTCTTTTGGTTCGTGATTCTGTTTGTCTTCTCCTTCGTTCTCT 233 Query 236 TCTCCACCATGTTTATTTTTAAGGGGAAGTTTCGTCCGGTGGTTCGTTCGACGATAAGCT 295 |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 234 TCTCCACCATGTTTATCTTTAAAGGGAAGTTTCGTCCGGTGGTTCGTTCGACGATAAGCT 293 Query 296 TCTCAACGGCTGTTACGGCAAGGGCGGTTTTCCGTGAGTCTATATCGTCTTCTCCGGCGG 355 ||||||||||||||||||| ||||||||| || | ||||||||||||||||| ||||||| Sbjct 294 TCTCAACGGCTGTTACGGCGAGGGCGGTTCTCGGCGAGTCTATATCGTCTTCCCCGGCGG 353 Query 356 TTACGATTCGTGAAGCGGTGAAATTACCTGAACAAAC-TCTGGTTTTCCTAAAATACCCT 414 ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 354 TTACGATTCGTGAAGCGGTGAAATTACCTGAACAAACGT-TGGTTTTCCTAAAATACCCT 412 Query 415 CAGTCTCGTCGGTTATTTACAAAAGACGATCTCATTTGCGTTTTCTCCGGTTCGTCGAAG 474 ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 413 CAGTCTCTTCGGTTATTTACAAAAGACGATCTCATTTGCGTTTACTCCGGTTCGTCGAAG 472 Query 475 CTACGGAAAGTGTATCCGACGGCTGTGGACAGAGACAAATTTGGAGGTCAGATCGTACGG 534 |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 473 CTACGGAAAGTGTATCCGACGGCTGTTAACAGAGACAAATTCGGAGGTCAGATCGTACGG 532 Query 535 TGTCCTGAGACGCCACGTGGCTACACCATTTCGCTTGCCGTTTCGAGATGGACGACCGAT 594 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||| Sbjct 533 TGTCCTGAAACGCCACGTGGCTACACCATATCGCTTGCTGTTTCGAGATGGACGACGGAT 592 Query 595 GATCATCTCCCGGCTGGACCAACTCACCGGTATGATTGGCTGGTTTACGACGCCGTGATC 654 ||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| Sbjct 593 GATCATCTCCCGGCTGGGCCAACTCACCGGTGGGATTGGCTTTTTTACGACGCCGTGATC 652 Query 655 GACTACGATAACTCTACGGTGGTTTTTGTCAAGGGGCTTAATCTACGGCCAGGAAGAGTT 714 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653 GACTACGATAACTCTACGGTGGTTTTTGTCAAGGGGCTTAATCTACGGCCAGGAAGAGTT 712 Query 715 GCTGACGTGTCGAGATATGAGTGCGTGTACGGTTGGGATTTCGCGAAACATAATCGGTTA 774 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 713 GCTGACGTGTCGAGATATGAGTGCGTGTACGGCTGGGATTTCGCGAAACATAATCGGTTA 772 Query 775 ATAAGATCAGATGTCATCACTGCGGCTCAGGAGATCGTACGGTGTAGAACACCGTTAGCT 834 || ||||||||||| ||| | |||||||||||||| ||||||||| |||||||||||||| Sbjct 773 ATTAGATCAGATGTTATCTCAGCGGCTCAGGAGATAGTACGGTGTCGAACACCGTTAGCT 832 Query 835 GTGTTAGACGGCCCAAAAGCGGCCCGTGGGCCTGTTAAAGTCTCGGTTAGAATCAAAGGA 894 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 833 GTGTTAGACGGCCCAAAAGCGGCCCGTGGGCCTGTTAAAGTCTCGGTTAGAATTAAAGGA 892 Query 895 GGAACCGGAATGCTTCCTTCTATCGCTCAGCCGGTTCGGATCATTAACCCGCCGCGAAAG 954 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 893 GGAACCGGTATGCTTCCTTCTATCGCTCAACCGGTTCGGATCATTAACCCGCCGCGAAAG 952 Query 955 AAACCCTTTCAAATGTGCGTTTGCACCATGACCCGAAACGCAGCCGCGGTTTTGAGAGAG 1014 ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 953 AAACCGTTTCAAATGTGCGTTTGCACTATGACGCGAAACGCAGCCGCGGTTTTGAGAGAG 1012 Query 1015 TGGGTGATGTATCACGCCGGAATTGGCGTTCAACGGTGGTTCATCTATGACAACAACAGC 1074 ||||||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct 1013 TGGGTGATGTATCACGCCGGAATCGGCGTTCAACGGTGGTTCATATACGATAACAACAGC 1072 Query 1075 GACGACGATATCATCGCCGAGATCGAGAATCTCGAAAGACGTGGTTACAACATCTCTAGA 1134 || ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct 1073 GATGACGACATAATCGCCGAGATCGAGAATCTCGAAAGACGCGGTTACAATATCTCGAGA 1132 Query 1135 CATTTCTGGCCGTGGATTAAAACTCAGGAAGCCGGATTCTCTAATTGCGCGATCCGTGCA 1194 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||||| Sbjct 1133 CATTTCTGGCCGTGGATTAAAACTCAAGAAGCTGGATTCTCTAATTGTGCGATTCGTGCA 1192 Query 1195 AAGAGCGATTGCGATTGGATTGCGTTTATCGACGTCGACGAGTTCTTCTACATCCCATCC 1254 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct 1193 AAGAGCGATTGCGATTGGATCGCGTTTATTGACGTCGACGAGTTCTTCTACATCCCCTCC 1252 Query 1255 GGTGAAACTCTAACTTCCGTCATCAGAAATTACACAACCACCGACTCAATCGGTGAAATT 1314 |||||| | |||||||||||||| | ||||||||| | | |||| || || ||||||||| Sbjct 1253 GGTGAATCCCTAACTTCCGTCATAAAAAATTACACTAGCTCCGATTCGATTGGTGAAATT 1312 Query 1315 CGAACACCTTGCCACAGTTTCGGGCCATCGGGTTTGAGATCTCGGCCTCG-GAGTGGAGT 1373 ||||| || ||||| ||||| || || ||||||||||||||||| || || || |||||| Sbjct 1313 CGAACGCCGTGCCATAGTTTTGGACCGTCGGGTTTGAGATCTCGACCACGAGA-TGGAGT 1371 Query 1374 CAC-GTCGGGATACACTTGCCGTGTGGTGTTACCGGAGAGACACAAGAGCATAATCCGGC 1432 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1372 CACCG-CGGGATACACTTGCCGTGTGGTGTTACCGGAGAGACACAAGAGCATAATCCGGC 1430 Query 1433 CGGAAGCGATGAACGCGACGCTGATAAACGTTGTTCACCATTTTCACCTCAGAGATGGAT 1492 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 1431 CGGAAGCGATGAACGCGACGCTGATTAACGTGGTTCACCATTTTCACCTCAGAGATGGAT 1490 Query 1493 TCACGTTTGCTGACATGGATAAGGATATAATGGTAATCAACCACTACAAGTATCAGGTGT 1552 ||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||| || | Sbjct 1491 TCACGTTTGCTGACATGGACAAGGATATAATGGTAATTAACCATTACAAATATCAAGTTT 1550 Query 1553 GGGAGGTTTTCAAAGAGAAGTTTTATCGGCGAGTCGCGACGTACGTAGCGGATTGGCAAA 1612 ||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||| Sbjct 1551 GGGAGGTTTTCAAAGAGAAGTTTTATCGGAGAGTCGCGACTTATGTAGCGGATTGGCAAA 1610 Query 1613 ACGAAGAGAATGTCGGGTCAAGAGATCGAGCACCCGGTTTAGGAACCCGACCCGTTGAAC 1672 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 1611 ACGAAGAGAATGTCGGGTCGAGAGATCGGGCACCCGGTTTAGGAACCCGACCCGTTGAAC 1670 Query 1673 CATCTGATTGGGCTGAGAGATTCTGTGAGGTTAATGATACGGGGCTTAGAGATCAAGTGT 1732 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||| Sbjct 1671 CATCTGATTGGGCTGAGAGATTCTGTGAGGTGAATGATACGGGGCTTAAAGATCAGGTGT 1730 Query 1733 TTGAGAAGTTCAAAGACaaaaaaaCGCAGCGTTTAGTTTGGGAAAAAGCGGAAGAAGACG 1792 |||||||||| |||||||| ||||||||||||||| | ||||||||||||||||| || Sbjct 1731 TTGAGAAGTTTAAAGACAATAAAACGCAGCGTTTAATGTGGGAAAAAGCGGAAGA---CG 1787 Query 1793 ACAATATCCAGAGAATGGTGAGTGAAACACCATTGAGAGTTACTAATCGATCTGGAGATG 1852 ||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||| Sbjct 1788 ACAATATCCAGAGAATGGTGAGTGAAACACCATCAAGAGTTACTAGTCGATCCAGAGATG 1847 Query 1853 GATCAAATGGATCAAAGGAAGTATCGATCGCGAGAGAGAAGAATGGTGAAAACGCAGAGA 1912 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1848 GATCAAATGGATCGAAGGAAGTATCGATCGCGAGAGAGAAGAATGGTGAAAACGCAGAGA 1907 Query 1913 TATTCATCAGCCCGAGATTCAAATCAGCGGCGGCTATGGCGGGTTGGGACGAAGAAGATC 1972 | ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 1908 TTTTCATCAGCCCGAGATTCAAATCTGCGGCGGCTCTGGCGGGTTGGGACGAAGAAGATC 1967 Query 1973 TGATAATCGCTAGCTTTGTGGTAGATGATACTCCTGAAAGAAGTTCTTCAAAGCGAAGGA 2032 |||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||| Sbjct 1968 TGATAATCGCTAGCTTTGTGGTTGAAGATACTCCTGAAAGAAGCTCTTCAAAGCGAAGGA 2027 Query 2033 GACGTTCCAATTTGTTGTTTAAATCAACCCCACCTTCTGGTTCTTCAAGAAGGAATCAGC 2092 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct 2028 GACGTTCCAATTTGTTGTTTAAATCAACCCCACCTTCAGGTTCTTCAAGAAGGAAGCAGA 2087 Query 2093 GTGTTAAGCAAAGTCTTGTTCCGTTACCTGTTATTGATCTTGATAAAGTAATCAGACATg 2152 ||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 2088 GTGTTAAACAAAATCTTGTTGCGTTACCTGTTATTGATCTTGATGAAGTAATCAGACATG 2147 Query 2153 aagaagaaaaatctgcagagaagaagaaaaagaagagagagatggaaacagaaacaaaag 2212 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2148 AAGAAGAGAAATCTGCAGAGAAGAAGAAAAAGAAGAGAGAGATGGAAACAGAAACACAAG 2207 Query 2213 a--aga-gaagaaaatagataaagatgagaagagTTTGTCAGATCA--------T----G 2257 | ||| |||||||||||||||||||||||||| |||||||| || | | Sbjct 2208 ACGAGAAGAAGAAAATAGATAAAGATGAGAAGAACTTGTCAGAGCAGAACCCAATTCCTG 2267 Query 2258 TTGTGCTTCCTTGCATAGATAAGCTTCGAGATGAATTGTCTTGCGCGATTTGTCTTGAGA 2317 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2268 TTGTGCTTCCTTGCATAGATAAGCTTCGAGACGAATTGTCTTGCGCGATTTGTCTTGAGA 2327 Query 2318 TTTGCTTTGAACCTAGTACTACAACTTGTGGACACAGCTTCTGCAAAAAGTGTTTGCGAT 2377 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2328 TTTGCTTTGAACCCAGTACTACAACCTGTGGACACAGCTTCTGCAAAAAGTGTTTGCGAT 2387 Query 2378 CTGCGGCGGATAAGTGTGGAAGGAAATGCCCTAAATGCAGGCAACTAATAGGAAATGGAA 2437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2388 CTGCGGCGGATAAGTGTGGAAGGAAATGCCCTAAATGCAGGCAACTAATAGGAAATGGAA 2447 Query 2438 GATATTGTACTGTCAATACGGTTCTTTGGAACACAATCCAGCTTTTGTTCCCTAAAGAAG 2497 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2448 GATATTGTACGGTTAATACGGTTCTTTGGAACACAATCCAGCTTTTGTTCCCTAAAGAAG 2507 Query 2498 TCGAAGCACAGAGAGCTGCTTCTGCTAACTTGAAAGGCAAGGAGACACCGAGTCCTAGAA 2557 |||||||||| ||||||||| |||||| ||||||||||||||| || ||||||||||||| Sbjct 2508 TCGAAGCACATAGAGCTGCTGCTGCTATCTTGAAAGGCAAGGAAACGCCGAGTCCTAGAA 2567 Query 2558 ATCCGAATCAAAGGCTAAGAAGCAGAAACAGGGAAACTGCATTGTTTCAAGAGAGGTTAC 2617 |||| |||||||||||||||||||||||||| || ||||| ||||||||||| ||||||| Sbjct 2568 ATCCTAATCAAAGGCTAAGAAGCAGAAACAGAGACACTGCCTTGTTTCAAGAAAGGTTAC 2627 Query 2618 AAAGAGAGGATATTTCGAGATTGCTTGTATCTGAAGAGAGAAGTGAGAGGAGCGAAAGAA 2677 ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct 2628 AAAGAGAGGATATTTCGAGATTGCTTGTATCCGAAGAGAGAAGCGAGAGGAGCGAGAGAA 2687 Query 2678 GGAGGAGAAGTACAAGTATGAGGTTGGATCAAAATAGGGATGCAGCATTAGCGAT-GCGG 2736 |||||||||| |||||||||||||||||||| |||||||||| |||||||| || |||| Sbjct 2688 GGAGGAGAAGCGCAAGTATGAGGTTGGATCAAGATAGGGATGCTGCATTAGC-ATTGCGG 2746 Query 2737 TTACAGCGACAGGAGTTCGCATCAGCTTTTGGCGCAACGACGGCTGAAACTTCTTCTTCA 2796 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2747 TTACAGCGGCAAGAGTTCGCATCAGCTTTTGGCGCAACGACGGCTGAAACTTCTTCTTCA 2806 Query 2797 TCGGTTTCTACTCTGTCGCGAGCAAGAGCTAACCTGCA-AGCTATGGCGTCAAGAGCTGT 2855 ||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| Sbjct 2807 TCGGTTTCTACTCTGTCGCTAGCAAGAGCTAACCTG-AGAGCTATGGCGTCAAGAGCTGT 2865 Query 2856 TCGCAGGCAAGGATGA 2871 |||||||||||||||| Sbjct 2866 TCGCAGGCAAGGATGA 2881 > Ahg493908 jgi|Araly1|493908|fgenesh2_kg.7__3341__AT5G40720.1 Length=1976 Score = 965 bits (522), Expect = 0.0 Identities = 1164/1467 (79%), Gaps = 72/1467 (5%) Strand=Plus/Plus Query 354 GGTTACGATTCGTGAAGC-GGTGAAATTACCTGAACAAACTCTGGTTTTCCTAAAATACC 412 ||| ||||| | |||||| | || | || || || ||||| || ||||||||||||||| Sbjct 358 GGTGACGATCCATGAAGCAGTTG-AGTTTCCCGACCAAACAATGATTTTCCTAAAATACC 416 Query 413 CT-CAGT-CTCGTCGGTTATTTACAAAAGACGATCTCATTTGCGTTTTCT-C--CG---- 463 || || | || |||||||||||||||||| || ||| |||||||||||| | || Sbjct 417 CTCCA-TATTC-TCGGTTATTTACAAAAGAGGACCTCTTTTGCGTTTTCTCCGACGTAAA 474 Query 464 -G-TTCGTCGAAGCTACGGAAAGTGTA-TCCG-ACGGCTGTGGACAGAGACAAATTTGGA 519 | |||||| || ||| |||| | | |||| | || ||||| | ||| | | ||| Sbjct 475 CGATTCGTCTAAACTATTTAAAGAG-ATTCCGTTC-GCGGTGGAAACCGACGACTATGGC 532 Query 520 GGTCAGATCGTACGGTGTCCTGAGACG--CCACGTGGCTACACCATTTCGCTTGCCGTTT 577 ||||||||||||||||| | || || ||||||||| | || | || || ||||||| Sbjct 533 CGTCAGATCGTACGGTGT--TCAGCCGTTCCACGTGGCAATACTGTATCCCTCGCCGTTT 590 Query 578 CGAGATGGACGACCG---ATGATCATCTCCCGGCT-GGAC-CAACTCACCGGTATGATTG 632 ||||||||||| | || || |||||| | | || | | || ||||| | ||||| Sbjct 591 CGAGATGGACGGTTGATAATAATAATCTCCAAG-TAGGGCTC-ACACACCGATGGGATTG 648 Query 633 GCTGGTTTACGACGCCGTGATCGACTACGATAACTCTACGGTGGTTTTTGTCAAGGGGCT 692 |||||| |||||||||||||||||| |||| || || ||||||||||||||||||||||| Sbjct 649 GCTGGTGTACGACGCCGTGATCGACGACGACAATTCCACGGTGGTTTTTGTCAAGGGGCT 708 Query 693 TAATCTACGGCCAGG-AAGAGTTGCTGACGTGTCGAGATATGAGTGCGTGTACGGTTGGG 751 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 709 TAATCTACGGCCAGGAAAG-GTTGCTGACGTGTCGAGATATGAGTGCGTGTACGGTTGGG 767 Query 752 ATTTCGCGAAA-CATAATCGGTTAATAAGATCAGATGTCATCACTGCGGCTCAGGAGATC 810 |||| | ||| | || | || | ||| || | || ||| ||||||| || |||||| Sbjct 768 ATTTTAC-AAAGCCCAAACTTTTGCTTAGAGCACAAGTTATCTCTGCGGCCCAAGAGATC 826 Query 811 GTACGGTGTAGAACACCGTTAGCTGTGTTAGACGGCCCAA-AAGCGGCCC---GTGGGCC 866 ||||| || | ||| || || | || ||||||||||||| || ||||| | || Sbjct 827 GTACGATGCAAAACGCCACTAACAGTATTAGACGGCCCAAGAA-AGGCCCAATCTCAACC 885 Query 867 TGTTAAAGTCTCGGTTAGAATCAAAGGAGGAACCGGAATGCTTCCTTCTATCGCTC-AGC 925 || ||||| || || || || |||||| | | || |||||||||||| | || | | | Sbjct 886 GGTGAAAGTTTCTGTGAGGATTAAAGGAAGTA--GG-ATGCTTCCTTCTGTTGC-CAACC 941 Query 926 CGGTTCGGA--TCATTAACCCG-CCGCGA-AAGAAACCCTTTCAAATGTGCGTTTGCACC 981 | || | || | | | || | |||| | ||| | | ||| ||||| ||| Sbjct 942 CAATT-AAACGTCCGGGTCGGGTCAAAGACACGAAAACGTTTGAGACGTGTGTTTGTACC 1000 Query 982 ATGACCCGAAACGCAGC-CGCGGTTTTGAGAGAGTGGGTGATGTATCACGCCGGAATTGG 1040 ||||| ||||||||||| | ||||||||||| ||||| ||||| ||||||||||| || Sbjct 1001 ATGACGCGAAACGCAGCAAAC-GTTTTGAGAGAATGGGTAATGTACCACGCCGGAATCGG 1059 Query 1041 CGTTCAACGGTGGTTCATCTATGACAACAACAGCGACGACGATATCATCGCCGAGATCGA 1100 ||||||||||||||||||||| |||||||||||||||||||| || | |||||||| | Sbjct 1060 CGTTCAACGGTGGTTCATCTACGACAACAACAGCGACGACGACATTGTTTCCGAGATCAA 1119 Query 1101 GAATCTCGAAAGA-CGTGGTTACAACATCTCTAGACATTTCTGGCCGTGGATTAAAACTC 1159 |||||| |||| | || |||||||||||||| |||||||| ||||||||||| ||||||| Sbjct 1120 GAATCTAGAAA-ATCGCGGTTACAACATCTCGAGACATTTTTGGCCGTGGATAAAAACTC 1178 Query 1160 AGGAAGCCGGATTCTCTAATTGCGCGATCCGTGCAAAGAGCGATTGCGATTGGATTGCGT 1219 | ||||| |||||| | ||||||||||| || ||||||||||||||||||||| |||||| Sbjct 1179 AAGAAGCAGGATTCGCCAATTGCGCGATTCGAGCAAAGAGCGATTGCGATTGGGTTGCGT 1238 Query 1220 TTATCGACGTCGACGAGTTCTTCTACATCCCATCCGGTGAAACTCT-AACTTCCGTCATC 1278 ||||||||||||||||||||||||||||| | || ||| |||| || ||| ||| ||| Sbjct 1239 TTATCGACGTCGACGAGTTCTTCTACATCTCTTCTGGTCAAAC-CTTAACCGACGTAATC 1297 Query 1279 AGAAATTACACAAC--CA-CCGACTCA-ATCGGTGAAATTCGAACACCTTGCCACAGTTT 1334 |||||| ||||||| | ||| | | || |||||||||||||| || || |||||||| Sbjct 1298 AGAAATCACACAACATCGTCCGGCG-AGATTGGTGAAATTCGAACGCCGTGTCACAGTTT 1356 Query 1335 CGGGCCATCGGGT-TT-GAGATCTCGGCCTCGGAG-TGGAGTCACGTCGGGATACACTTG 1391 ||| || ||||| || | |||| | || || | |||||||||| ||| || || || Sbjct 1357 CGGACCGTCGGGACTTAGCGATC-CA-CCG-GGCGGTGGAGTCACGGCGGCTTATACGTG 1413 Query 1392 CCGTGTGGTGTTACCGGAGAGACACAAGAGCATAATCCGGCCGGAAGCGATGAACGCGAC 1451 ||| ||| |||||||||||||||||||||||||||| | |||||| || | |||||||| Sbjct 1414 TCGTATGGCGTTACCGGAGAGACACAAGAGCATAATCAGACCGGAATCGCTAAACGCGAC 1473 Query 1452 GCTGATAAACGTTGTTCACCATTTTCACCTCAGAGATGGATTCACGTTTGCTGACATGGA 1511 |||||||||||| || || ||||||||| | | ||| |||||| |||| |||||| |||| Sbjct 1474 GCTGATAAACGTGGTGCATCATTTTCACTTAAAAGAAGGATTCGCGTTCGCTGACGTGGA 1533 Query 1512 TAAGGATATAATGGTAATCAACCACTACAAGTATCAGGTGTGGGAGGT-TTTCAAAGAGA 1570 ||||| ||| |||||||| |||||||| || |||||||| |||||| | ||| ||||||| Sbjct 1534 TAAGGGTATGATGGTAATTAACCACTATAAATATCAGGTTTGGGAGATATTT-AAAGAGA 1592 Query 1571 AGTTTTATCGGCGAGTCGCGACGTACGTAGCGGATTGGCAAAACGAAGAGAATGTCGGGT 1630 ||||| | || |||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1593 AGTTTAAAAGGAGAGTGGCGACGTACGTGGCGGATTGGCAAAACGAAGAGAATGTCGGGT 1652 Query 1631 C-AAGAGATCGAGCACCCGGTTTAGGAACCCGACCCGTTGAACCATCTGATTGGGCTGAG 1689 | || |||||| || ||||| ||||| ||||||||||||||||| ||||||||||||||| Sbjct 1653 CGAA-AGATCGGGCCCCCGGATTAGGGACCCGACCCGTTGAACCGTCTGATTGGGCTGAG 1711 Query 1690 AGATTCTGTGAGGTTA-ATGATACGGGGCTTAGAGATCAAGTGTTTGAGAAGTTCAAAGA 1748 || || ||||| || | | |||| |||||||| ||| ||||| || || |||| || Sbjct 1712 AGGTTTTGTGAAGTGAGA-GATATTGGGCTTAGGGATTGGGTGTTGGATAATTTCAGGGA 1770 Query 1749 CaaaaaaaCGCAGCGTTTAGTTTGGGA 1775 | ||||||||||||||||| ||||| Sbjct 1771 CCGTAAAACGCAGCGTTTAGTATGGGA 1797 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 108366747025 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5