BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G27740.1
Length=1576
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484564 jgi|Araly1|484564|fgenesh2_kg.5__556__AT3G27740.1 2438 0.0
Ahg318572 jgi|Araly1|318572|fgenesh1_pm.C_scaffold_3001588 1011 0.0
Ahg952512 jgi|Araly1|952512|scaffold_81400002.1 512 3e-144
> Ahg484564 jgi|Araly1|484564|fgenesh2_kg.5__556__AT3G27740.1
Length=1553
Score = 2438 bits (1320), Expect = 0.0
Identities = 1481/1558 (95%), Gaps = 13/1558 (1%)
Strand=Plus/Plus
Query 17 TAAAAAACCTTGACGCCGTTTTCTTCTTCGATCTTCTTCTTCCTCCAGAGAAAACAACAT 76
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 1 TAAAAAACCTTGACGCCGTTTTCTTCTTCGTTCTTCTTCTTCCTCCTGAGAAAACAACAT 60
Query 77 GGCCATGGCAACAAGGACTCTAGGCTTTGTTTTGCCTACGAGCTTATCTTCCCAGCCTTC 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GGCCATGGCAACAAGGACTCTAGGCTTTGTTTTGCCTACGAGCTTATCTTCCCAGCCTTC 120
Query 137 CTTCGACCGTCGCGGCGGTGGATTTAGGGTTTCTGTCATCCGTTGCTCCACTTCTCCACT 196
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 121 CTTCGACCGTCGCGGCGGTGGATTTAGGGTTTCGGTCATCCGATGCTCCACTTCTCCACT 180
Query 197 CACTTTTCCCACTTCTGGTGTTGTGGAGAAACCTTGGACTTCGTACAATGCTAGGCTTGT 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CACTTTTCCCACTTCTGGTGTTGTGGAGAAACCTTGGACTTCGTACAATGCTAGGCTTGT 240
Query 257 GTTAGAAGATGGTTCTATCTGGCCTGCTAAGTCTTTTGGTGCTCCTGGAACCCGTATTGC 316
|||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||
Sbjct 241 GTTAGAAGATGGTTCTATCTGGCCGGCTAAGTCCTTTGGTGCTCCTGGAACTCGTATTGC 300
Query 317 TGAATTGGTGTTTAACACTTCCTTGACAGGGTATCAAGAAATT-TTAACTGATCCTAGTT 375
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 301 CGAATTGGTGTTTAACACTTCCTTGACAGGGTATCAAGAAATTCTT-ACTGATCCTAGTT 359
Query 376 ATGCTGGGCAGTTTGTGCTAATGACAAACCCACAAATTGGTAATACTGGTGTCAATCCTG 435
|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 360 ATGCTGGGCAATTTGTGCTAATGACAAACCCACAAATTGGTAACACTGGTGTCAATCCCG 419
Query 436 ATGATGAAGAATCTGGGCAATGCTTTCTTACTGGTTTGGTGATAAGAAACCTAAGCATTA 495
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 420 ATGATGAAGAGTCTGGGCAATGCTTTCTTACTGGTTTGGTGATAAGAAATCTAAGCATCA 479
Query 496 GTACCTCAAACTGGAGATGCACGAAGACACTTGCTGATTATCTAACCGAAAGGGACATCA 555
||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||
Sbjct 480 GTACCTCAAACTGGAGATGCACGAAAACACTTGCTGACTATCTAACCGAAAGGAACATCA 539
Query 556 TGGGAGTTTATGATCTTGACACTCGAGCAATAACCCGTCGGTTAAGAGAAGATGGTAGTC 615
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 540 TGGGAGTTTATGATCTTGACACTCGAGCAGTAACCCGTCGGTTAAGAGAAGATGGTAGTC 599
Query 616 TTATCGGGGTGTTGAGCACAGAACAGTCCAAAACAGATGATGAACTTCTGCAAATGTCTC 675
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 600 TTATCGGAGTGTTGAGCACAGAACAGTCCAAAACAGATGACGAACTTCTGCAAATGTCTT 659
Query 676 GTTCATGGGATATCGTAGGTATTGATCTAATAAGTGATGTTTCATGTAAATCTCCCTATG 735
|||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct 660 GTTCATGGGACATCGTAGGTATTGATCTAATAAGTGGCGTATCATGTAAATCTCCTTATG 719
Query 736 AATGGGTTGACAAAACAAACGCTGAATGGGATTTCAACACGAATTCACGAGATGGGAAAT 795
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 720 AATGGGTTGACAAAACAAACCCTGAATGGGATTTCAACACGAATTCACGCGATGGGAAAT 779
Query 796 CCTACAAAGTTATTGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTTTCAT 855
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 780 CCTACAAAGTTATCGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTATCAT 839
Query 856 CTTACGGATGTCAAATCACTGTTGTTCCGTCCACATTTCCAGCTGCCGAGGCGCTGAAAA 915
||||||||||||||||||||||||||||||| |||| |||||| ||||||| |||||||
Sbjct 840 CTTACGGATGTCAAATCACTGTTGTTCCGTCGACATGGCCAGCTTCCGAGGCACTGAAAA 899
Query 916 TGAATCCAGATGGGATTTTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATG 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TGAATCCAGATGGGATTTTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATG 959
Query 976 CTGTTGAGACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGCC 1035
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 960 CTGTTGAGACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGTC 1019
Query 1036 ATCAGTTGCTTGGTCAAGCTTTGGGGGGTAAAACCTTCAAGATGAAGTTTGGTCATCATG 1095
|||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1020 ATCAGTTGCTCGGCCAAGCTTTGGGTGGTAAAACCTTCAAGATGAAGTTTGGTCATCATG 1079
Query 1096 GAGGAAACCACCCAGTTCGTAACAACAGAACTGGTCAGGTGGAGATCAGTGCTCAGAATC 1155
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1080 GAGGAAACCACCCAGTTCGTAACAACAGAACTGGCCAGGTGGAGATCAGTGCTCAGAACC 1139
Query 1156 ACAACTATGCGGTTGATCCAGCTTCACTTCCCGGAGGCGTAGAAGTAACACATGTCAATC 1215
||||||| |||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1140 ACAACTACGCGGTTGACCCGGCTTCACTTCCCGGAGGCGTAGAAGTAACTCATGTCAATC 1199
Query 1216 TCAATGATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTTATGTCACTCCAGT 1275
| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
Sbjct 1200 TGAATGATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTCATGTCTCTCCAAT 1259
Query 1276 ACCACCCTGAAGCCTCCCCTGGACCTCACGACTCTGATAACGCATTTAGAGAGTTCATAG 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 ACCACCCTGAAGCCTCCCCTGGACCTCACGACTCTGATAACGCATTTAGAGAGTTCATAG 1319
Query 1336 AGCTTATGAAGAGATCGAAACAAAGCTCCTGATCAATGAGAAGTACTCTTTGTTTTTGTA 1395
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1320 AGCTTATGAAGAGATCGAAACAAAGCTCCTGATCAATGAGAAGTACTCTTTGTTTT-GTA 1378
Query 1396 CG-TT-GCTGTTTTTAATCATGGCACTTAAATTAAAACCAA-CTGTTTTGTTAGTGATAA 1452
| || |||||||| |||| ||||||||||||||| ||||| ||||||||||||||| ||
Sbjct 1379 CTATTTGCTGTTTTAAATCGTGGCACTTAAATTAAGACCAAACTGTTTTGTTAGTGACAA 1438
Query 1453 TGGATTGGCATTATTGTTTCTTTGCTTTGACTGTATTGAGCAACCATCCAACCTATAAAA 1512
|||| |||||||||||||| | |||||| ||||||| || |||||||| ||||||||||
Sbjct 1439 TGGAGTGGCATTATTGTTT-TC-GCTTTGTCTGTATTAAGGAACCATCCCACCTATAAAA 1496
Query 1513 TAAGT-AAGATTTTGTAAAAGTAATAAAGAGATAAAGA---GATGTGAGAGTTTGTGT 1566
||| | |||| ||||||||||||||||| ||| ||| | |||||||||||||||||
Sbjct 1497 TAA-TCAAGAATTTGTAAAAGTAATAAAAAGAAAAAAAAATGATGTGAGAGTTTGTGT 1553
> Ahg318572 jgi|Araly1|318572|fgenesh1_pm.C_scaffold_3001588
Length=1302
Score = 1011 bits (547), Expect = 0.0
Identities = 963/1160 (83%), Gaps = 43/1160 (4%)
Strand=Plus/Plus
Query 230 TTGGACT-TCGTACAATGCTAGGCTTGTGTTAGAAGATGGTTCTATCTGGCCTGCTAAGT 288
||| ||| || ||||||||||||||||||||||||||||| ||| | ||| | |||||||
Sbjct 152 TTGCACTCTCATACAATGCTAGGCTTGTGTTAGAAGATGGCTCTGTGTGGTCGGCTAAGT 211
Query 289 CTTTTGGTGCTCCTGGAACCCGTATTGCTGAATTGGTGTTTAACACTTCCTTGACAGGGT 348
||||||||||| ||||||||||| ||||||||||||| |||||||| || ||||||||||
Sbjct 212 CTTTTGGTGCTTCTGGAACCCGTGTTGCTGAATTGGTTTTTAACACCTCTTTGACAGGGT 271
Query 349 ATCAAGAAATTTTAACTGA-T--C---CT----AGTTATGCTGGGCAGTTTGTGCTAATG 398
||||||| ||| | || || | | || ||||||||||| || ||||||||||||
Sbjct 272 ATCAAGAGATTCTGAC-GAGTCCCAGGCTAAGAAGTTATGCTGGACAATTTGTGCTAATG 330
Query 399 ACAAACCCACAAATTGGTAATACTGGTGTCAATCCTGATGATGAAGAATCTGGGCAATGC 458
||||| || || || ||||| || ||||||||||| |||||||||||||| |||||||
Sbjct 331 ACAAATCCTCAGATCGGTAACACCGGTGTCAATCCCGATGATGAAGAATCAAGGCAATG- 389
Query 459 TTTCTT-ACTGGTTTGGTGATAAGAAACCTAAGCATTAGTACCTCAAACTGGAGATGCAC 517
||| || |||||||||||||||||| || ||||| |||||||||||||||||||| |
Sbjct 390 TTTTTTGGCTGGTTTGGTGATAAGAAGTCTTAGCATCAGTACCTCAAACTGGAGATGTAT 449
Query 518 GAAGACACTTGCTGATTATCTAACCGAAAGGGACATCATGGGAGTTTATGATCTTGACAC 577
|| ||||||| ||| |||||| | || ||| |||| |||||| | ||||||||||||||
Sbjct 450 GATTACACTTGGTGACTATCTAGCAGAGAGGAACATTATGGGAATCTATGATCTTGACAC 509
Query 578 TCGAGCAATAACCCGTCGGTTAAGAG-AAGATGGTAGTCTTATCGGGGTG-TTGAGCACA 635
|| |||||||||||||| ||||||| ||| || ||||||| ||| ||| || |||||
Sbjct 510 ACGGGCAATAACCCGTCGATTAAGAGAAAG-CGGCAGTCTTAACGGTGTGCTT-AGCACT 567
Query 636 GAACAG-TCCAAAACAGATGATGAACTTCTGCAAATGTCTCGTTCATGGGATATCGTAGG 694
| | | || ||||| || || |||||| |||| ||||| || || ||||||||||||||
Sbjct 568 G-ATGGATCTAAAACCGACGAGGAACTTTTGCATATGTCCCGCTCTTGGGATATCGTAGG 626
Query 695 TATTGATCTAATAAGTGATGTTTCATGTAAATCTCCCTATGAATGGGTTGACAAAACAAA 754
||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 627 CCTTGATCTAATAAGCAATGTTTCGTGTAAATCTCCCTACGAATGGGTTGAAAAAACAAA 686
Query 755 -CGCTGAATGGGA-TTTCAACACGAA--T--TCACGA-GATGGGA-AATCCTACAAAGTT 806
| |||||||||| ||| ||||| || | |||| | | | ||||||||| ||||
Sbjct 687 TC-CTGAATGGGAGTTT-AACAC-AACCTCCTCAC-ATCA-CAAAGAATCCTACAGAGTT 741
Query 807 ATTGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTT-TCATCTTACGGATG 865
||||| || ||||| || ||||||||||||||||||||||| ||| |||| ||||| ||
Sbjct 742 ATTGCATATGATTTCGGGATCAAGCAAAACATCCTAAGACG-CTTGGCATCATACGGCTG 800
Query 866 TCAAATCACTGTTGTTCCGTCCACATTTCCAGCTGCCGAGGCGC-TGAAAATGAATCCAG 924
| ||||||| ||||| || || |||| |||||||| ||||| | || ||||||||||||
Sbjct 801 TGAAATCACGGTTGTCCCATCAACATGGCCAGCTGCAGAGGCACTTG-AAATGAATCCAG 859
Query 925 ATGGGATT-TTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATGCTGTTGAG 983
|||| ||| || |||||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct 860 ATGGAATTCTT-TTCAGCAACGGTCCAGGAGATCCTTCTGCAGTGCCTTATGCAGTTGAA 918
Query 984 ACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGCCATCAGTTG 1043
|| |||||||||||||| || ||||| ||||| || |||||||||||||| ||||||||
Sbjct 919 ACGGTTAAAGAGCTTCTAGGAAAAGTTCCTGTCTATGGAATCTGTATGGGTCATCAGTTA 978
Query 1044 CTTGGTCAAGCT-TTGGGGGGTAAAACCT-TCAAGATGAAGTTTGGTCATCATGGAGGAA 1101
||||| |||||| || || |||||||||| | ||||||||||||||||||||||||||||
Sbjct 979 CTTGGACAAGCTCTT-GGAGGTAAAACCTAT-AAGATGAAGTTTGGTCATCATGGAGGAA 1036
Query 1102 ACCACCCAGTTCGTAACAACAGAACTGGTCAGGTGGAGATCAGTGCTCAGAATCACAACT 1161
|||| |||||| ||||||||||||| || || || ||||||||||||||||| || ||||
Sbjct 1037 ACCATCCAGTTTGTAACAACAGAACCGGCCATGTCGAGATCAGTGCTCAGAACCATAACT 1096
Query 1162 ATGCGGTTGATCCAGCTTCACTTCCCGGAGGCGTAGAAGTAACACATGTCAATCTCAATG 1221
|||| || || |||||||| || ||| || || ||||| || |||||||||||||| |
Sbjct 1097 ATGCAGTAGACCCAGCTTCTCTCCCCTCCGGTGTCGAAGTGACTCATGTCAATCTCAACG 1156
Query 1222 ATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTTATGTCACTCCAGTACCACC 1281
||||||| || || ||||| ||||| |||| ||||||||| ||||| || ||||| ||||
Sbjct 1157 ATGGAAGTTGCGCTGGTCTCTCTTTTCCGGCAATGAATGTCATGTCTCTTCAGTATCACC 1216
Query 1282 CTGAAGCCTCCCCTGGACCTCACGACTCTGATAACGCATTTAGAGAGTTCATAGAGCTTA 1341
|||| || || ||||||||||| ||||| |||||||||||| ||||||| | ||||| |
Sbjct 1217 CTGAGGCTTCTCCTGGACCTCATGACTCCGATAACGCATTTGGAGAGTTTGTGGAGCTCA 1276
Query 1342 TGAAGAGATCGAAACAAAGC 1361
|||| |||| ||||| |||
Sbjct 1277 TGAAAAGATTTAAACAGAGC 1296
> Ahg952512 jgi|Araly1|952512|scaffold_81400002.1
Length=1169
Score = 512 bits (277), Expect = 3e-144
Identities = 438/517 (85%), Gaps = 6/517 (1%)
Strand=Plus/Plus
Query 804 GTTATTGCTTACGATTTTGGAATCAAGCAAAACATCCTAAGACGCCTT-TCATCTTACGG 862
|||||||| || ||||| || ||||||||||||||||||||||| ||| |||| |||||
Sbjct 574 GTTATTGCATATGATTTCGGGATCAAGCAAAACATCCTAAGACG-CTTGGCATCATACGG 632
Query 863 ATGTCAAATCACTGTTGTTCCGTCCACATTTCCAGCTGCCGAGGCGCTGAAAATGAATCC 922
||| ||||||| ||||| || || |||| |||||||| ||||| || |||||||||||
Sbjct 633 CTGTGAAATCACGGTTGTCCCATCAACATGGCCAGCTGCAGAGGCTCTTAAAATGAATCC 692
Query 923 AGATGGGATTTTGTTCAGCAACGGTCCTGGAGACCCTTCTGCTGTGCCATATGCTGTTGA 982
||| || ||| | |||||||||||||| ||||| |||||||| ||||| ||||| |||||
Sbjct 693 AGACGGAATTCTATTCAGCAACGGTCCAGGAGATCCTTCTGCAGTGCCTTATGCAGTTGA 752
Query 983 GACAGTTAAAGAGCTTCTCGGTAAAGTCCCTGTTTACGGAATCTGTATGGGCCATCAGTT 1042
|| |||||||||||||| || ||||| ||||| || |||||||||||||| ||||||||
Sbjct 753 AACGGTTAAAGAGCTTCTAGGAAAAGTTCCTGTCTATGGAATCTGTATGGGTCATCAGTT 812
Query 1043 GCTTGGTCAAGCT-TTGGGGGGTAAAACCT-TCAAGATGAAGTTTGGTCATCATGGAGGA 1100
||||| |||||| || || |||||||||| | |||||||||||||||||||||||||||
Sbjct 813 ACTTGGACAAGCTCTT-GGAGGTAAAACCTAT-AAGATGAAGTTTGGTCATCATGGAGGA 870
Query 1101 AACCACCCAGTTCGTAACAACAGAACTGGTCAGGTGGAGATCAGTGCTCAGAATCACAAC 1160
||||| |||||| ||||||||||||| || || || ||||||||||||||||| || |||
Sbjct 871 AACCATCCAGTTTGTAACAACAGAACGGGCCATGTCGAGATCAGTGCTCAGAACCATAAC 930
Query 1161 TATGCGGTTGATCCAGCTTCACTTCCCGGAGGCGTAGAAGTAACACATGTCAATCTCAAT 1220
||||| || || |||||||| || ||| || || ||||| || ||||||||||||||
Sbjct 931 TATGCAGTAGACCCAGCTTCTCTCCCCTCCGGTGTCGAAGTGACTCATGTCAATCTCAAC 990
Query 1221 GATGGAAGCTGTGCGGGTCTATCTTTCCCGGAAATGAATGTTATGTCACTCCAGTACCAC 1280
|||||||| || || ||||| ||||| |||| ||||||||| ||||| || ||||| |||
Sbjct 991 GATGGAAGTTGCGCTGGTCTCTCTTTTCCGGCAATGAATGTCATGTCTCTTCAGTATCAC 1050
Query 1281 CCTGAAGCCTCCCCTGGACCTCACGACTCTGATAACG 1317
||||| || || ||||||||||| ||||| |||||||
Sbjct 1051 CCTGAGGCTTCTCCTGGACCTCATGACTCCGATAACG 1087
Score = 375 bits (203), Expect = 4e-103
Identities = 309/359 (86%), Gaps = 11/359 (3%)
Strand=Plus/Plus
Query 220 TGGAGAAACCTTGGA-CTTCGTACAATGCTAGGCTTGTGTTAGAAGATGGTTCTATCTGG 278
||||||||||||||| | || ||||||||||||||||||||||||||||| ||||| |||
Sbjct 221 TGGAGAAACCTTGGAGC-TCATACAATGCTAGGCTTGTGTTAGAAGATGGCTCTATGTGG 279
Query 279 CCTGCTAAGTCTTTTGGTGCTCCTGGAACCCGTATTGCTGAATTGGTGTTTAACACTTCC 338
| |||||||||||||||||| ||||||||||| ||||||||||||| |||||||| ||
Sbjct 280 TCGGCTAAGTCTTTTGGTGCTTCTGGAACCCGTGTTGCTGAATTGGTTTTTAACACCTCT 339
Query 339 TTGACAGGGTATCAAGAAATTTTAACTGATCCTAGTTATGCTGGGCAGTTTGTGCTAATG 398
||||||||||||||||||||| | |||||||||||||||||||| || |||||||| |||
Sbjct 340 TTGACAGGGTATCAAGAAATTCTGACTGATCCTAGTTATGCTGGACAATTTGTGCTTATG 399
Query 399 ACAAACCCACAAATTGGTAATACTGGTGTCAATCCTGATGATGAAGAATCTGGGCAATGC 458
||||| || || || ||||| || ||||||||||| |||||||||||||| |||||||
Sbjct 400 ACAAATCCTCAGATCGGTAACACCGGTGTCAATCCCGATGATGAAGAATCAAGGCAATG- 458
Query 459 TTTCTTACTGGTTTGGTGATAAGAAACCTAAGCATTAGTACCTCAAACTGGAGATGCACG 518
||| || |||| | ||||||| || ||||| |||||||||||||||||||| |||
Sbjct 459 TTT-TT--TGGT--G---ATAAGAAGTCTTAGCATCAGTACCTCAAACTGGAGATGTACG 510
Query 519 AAGACACTTGCTGATTATCTAACCGAAAGGGACATCATGGGAGTTTATGATCTTGACAC 577
|| ||||||| ||| |||||| | || ||| |||| |||||| | ||||||||||||||
Sbjct 511 AAAACACTTGGTGACTATCTAGCAGAGAGGAACATTATGGGAATCTATGATCTTGACAC 569
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59039879750
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5