BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G43670.1
Length=2276
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484808 jgi|Araly1|484808|fgenesh2_kg.5__800__AT3G43670.1 3317 0.0
Ahg347467 jgi|Araly1|347467|fgenesh1_pg.C_scaffold_5000859 2706 0.0
Ahg475070 jgi|Araly1|475070|fgenesh2_kg.2__200__AT1G62810.1 1413 0.0
Ahg936921 jgi|Araly1|936921|scaffold_501112.1 529 4e-149
> Ahg484808 jgi|Araly1|484808|fgenesh2_kg.5__800__AT3G43670.1
Length=2235
Score = 3317 bits (1796), Expect = 0.0
Identities = 2034/2149 (95%), Gaps = 15/2149 (1%)
Strand=Plus/Plus
Query 40 CTAACAATGGTGGAACTTTCGTTCTCTCAGCTCCTTGTCTTACTTT-TAAGCTTACTCTT 98
|||||||||||||||| ||| |||||||| |||||||||||| ||| |||||||||||||
Sbjct 56 CTAACAATGGTGGAACCTTCCTTCTCTCAACTCCTTGTCTTA-TTTATAAGCTTACTCTT 114
Query 99 TCTCTTCACTACTCTCGCGTCAAGTTCCAAGACCCCCCGATTCAAGTATTCGTTAGAGAA 158
||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||
Sbjct 115 TCTCTTCACTACTCTCGGGTCAAGTTCCAAGA---CCCGATTCAAGTATTCGTTAGAAAA 171
Query 159 GCCTCACCACCCACTTGACCCACTAACGACACCTGAAATAAAGAGAGTCCAAACCATCCT 218
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 172 GCCTCACCACCCGCTTGACCCACTAACGACACCTGAAATAAAGAGAGTCCAAACCATTCT 231
Query 219 CTCGGGTCATGATCCGGGTTTCGGGTCCGGGTCAACCATCATTCACGCCATGGCTCTCGA 278
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 232 CTCGGGTCATGATCCGGGTTTCGGGTCCGGGTCAGCCATCATTCACGCCATGGCTCTCGA 291
Query 279 CGAGCCGGATAAGCAACGTGTCATCCGGTGGAAGAAAGGTGATCGTCTCCCGCCGCGAAG 338
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 292 CGAGCCGGAGAAGCAACGTGTCGTCCGGTGGAAGAAAGGTGATCGTCTCCCGCCGCGAAG 351
Query 339 AGCGGAGATTCTTGCTATGTCTAACGGCGAGAGTCACGTGCTCACGGTGGATCTTAAATC 398
||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 352 AGCAGAGGTTCTTGCGATGTCTAACGGCGAGAGTCACGTGCTCACGGTGGATCTTAATTC 411
Query 399 CGGTCGGGTTGTTTCTGATTTGGTCAACCCGACTTTTGGATACCCGATTCTTACTATGAA 458
|||||||||||||| |||||||||||||| |||||||| || ||||||||||| |||||
Sbjct 412 GGGTCGGGTTGTTTCCGATTTGGTCAACCCCACTTTTGGGTATCCGATTCTTACCATGAA 471
Query 459 GGATATCATCGCAGTCTCACAGGTTCCTTACAAGAGCGTGGAGTTCAATCGCTCAATCGA 518
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 472 AGACATCATCGCAGTCTCACAGGTTCCTTACAAGAGCGTGGAGTTCAATCGCTCAATCGA 531
Query 519 AGCGCGTGGGATTCCGTTCTCCGGTTTGATTTGTATTACACCGTTCGCCGGTTGGTATGG 578
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 532 GGGGCGTGGGATTCCGTTCTCCGGTTTGATTTGTATTACACCGTTCGCCGGTTGGTATGG 591
Query 579 ACCGGACGAAGAAGGACGACGAGTCATAAAGATCCAATGTTTCTCAAAGCAAGACACTGT 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 ACCGGACGAAGAAGGACGACGAGTCATAAAGATCCAATGTTTCTCAAAGCAAGACACTGT 651
Query 639 CAATTTCTACATGAGACCTATCGAAGGACTTTATTTAACCGTCGATATGGATAAATTAGA 698
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||
Sbjct 652 CAATTTCTACATGAGACCTATTGAAGGACTTTATTTAACGGTCGATATGGATAAACTAGA 711
Query 699 GATCATCAAGATTGTAGACAATGGACCGGTTCCGGTTCCCAAGTCTACCGGTACGGAATA 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 712 GATCATCAAGATTGTAGACAATGGACCGGTTCCGGTTCCCAAGTCTACCGGTACGGAATA 771
Query 759 TAGATATGGGTTTCTTAATGAAACGGTATATATGGACCGTGTCAACCCAATGTCGATGGA 818
||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 772 TAGATATGGATTTCTTAATGAAACGGTACATATGGACCGTGTCAATCCAATGTCGATGGA 831
Query 819 GCAACCGGACGGTCCAAGTTTTCAAGTTGAGGATGGATACTTGGTTAAGTGGGCGAATTG 878
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 832 GCAACCGGACGGTCCAAGTTTTCAGGTTGAGGATGGATACTTGGTTAAGTGGGCGAATTG 891
Query 879 GAAATTTCATATTAAACCGGATCAACGTGCCGGTATGATTATCTCACAGGCTACAGTTCG 938
|||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 892 GAAATTTCATATCAAACCGGACCAACGTGCCGGTATGATCATCTCACAGGCTACAGTTCG 951
Query 939 TGATTCCAAGACAGGTGAAGCAAGAAGTGTAATGTACAAAGGTTTTGCGTCGGAGTTGTT 998
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 952 TGATTCCAAGACAGGTGAAGCAAGAAGTGTAATGTACAAAGGTTTTGCGTCAGAGTTGTT 1011
Query 999 CGTACCGAATATGGATCCAGGGGA-AGGTTGGTATTCAAAAGCTTACATGGATGCTGGAG 1057
||||||| |||||||||||||| | ||||||||| || ||||| ||||||||||||||||
Sbjct 1012 CGTACCGTATATGGATCCAGGG-ACAGGTTGGTACTCCAAAGCGTACATGGATGCTGGAG 1070
Query 1058 AGTTTGGTTTAGGACCTTCTTCAATGCCACTTGTGCCACTCAACGACTGTCCTCGAAACG 1117
|||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||
Sbjct 1071 AGTTTGGTTTAGGACCTTCTGCAATGCCGCTTGTGCCGCTCAACGACTGTCCTCGAAACG 1130
Query 1118 CTTACTACATTGATGGTTTCTTCGCTTCTCCTGAAGGCATTCCAATACTTCAACCTAACA 1177
||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||| |
Sbjct 1131 CTTACTATATTGATGGTTTCTTCGCTTCTCCTCAAGGCATTCCAATCCTTCAACCTAAGA 1190
Query 1178 TGATCTGCTTGTTCGAACGCTACGCGGGTGACACTAGCTGGCGACACTCTGAGATTCTTC 1237
||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct 1191 TGATCTGCTTGTTCGAACGCTACGCGGGTGACATTAGTTGGCGCCACTCTGAGATTCTTC 1250
Query 1238 TCCCTGGTGTAGATATAAGAGAGTCAAGGGCAAAGGTTACACTGGTAGCTAGAATGGCAT 1297
|||||||| |||||||| ||| |||||||||||||| || ||||| ||||||||||| |
Sbjct 1251 TCCCTGGTACAGATATAAAAGAATCAAGGGCAAAGGTGACGCTGGTGGCTAGAATGGCTT 1310
Query 1298 GTTCTGTTGGGAACTATGATTATATTTTTGATTGGGAGTTTCAAATGGATGGTGTGATTC 1357
|||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct 1311 GTTCAGTTGGGAACTATGATTATATATTTGATTGGGAGTTTCAAATGGATGGTTTGATTC 1370
Query 1358 GTGTTACGGTCGCGGCCTCGGGGATGTTGATGGTGAAAGGAACGGCTTACGAAAACGTTG 1417
||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 1371 GTGTTACGGTCGCTGCCTCAGGGATGTTGATGGTGAAAGGAACGGCTTACCAAAACGTCA 1430
Query 1418 AAGACTTGGGTGAGAAAGAGGATGATTCTGGACCGTTGATCTCAGAAAACGTTATAGGAG 1477
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1431 AAGACTTGGGTGAGAAAGAGGCGGATTCTGGACCGTTGATCTCAGAAAACGTTATAGGAG 1490
Query 1478 TCGTCCATGATCATTTCATATCGTTTCATCTAGACATGGACATTGATGGGTCAGCCAACA 1537
||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1491 TCGTCCACGATCATTTTATATCGTTTCATCTAGACATGGACATTGACGGGTCAGCCAACA 1550
Query 1538 ACTCCTTCGTTAAGGTTCATCTAGAGAAGCAGAGACTTCCACCTGGAGAATCAAGGAGAA 1597
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 1551 ACTCCTTCGTTAAGGTTCATCTAGAGAAGCAGAGACTTCCGCCTGGAAAATCAAGGAGAA 1610
Query 1598 AGAGTTACTTGAAGGTCAAGAAATATGTAGCCAAGACTGAGAAAGATGCTCAGATCAAGA 1657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1611 AGAGTTACTTGAAGGTCAAGAAATATGTAGCCAAGACTGAGAAAGATGCTCAGATCAA-A 1669
Query 1658 T-GAGCCTGTACGACCCCTACGAGTTCCATCTTGTGAACCCTAACCGACTTTCTCGGTTA 1716
| ||||||||| |||||||||||||||||| |||||||||||||| | | ||||| |||
Sbjct 1670 TTGAGCCTGTATGACCCCTACGAGTTCCATTTTGTGAACCCTAACAGGCGGTCTCGTTTA 1729
Query 1717 GGGAACCCGGCTGGTTACAAGCTTGTACCTGGTGGTAATGCTGCAAGTTTGCTCGATCAT 1776
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1730 GGGAACCCGGCTGGTTACAAGCTTGTGCCTGGTGGTAATGCTGCAAGTTTGCTCGATCAT 1789
Query 1777 GATGATCCACCGCAAATGCGAGGCGCTTTCACAAACAATCAGATATGGGTGACTCGGTAT 1836
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1790 GATGATCCACCTCAAATTAGAGGCGCTTTCACAAACAATCAGATATGGGTGACTCGGTAT 1849
Query 1837 AACCGGTCAGAGCAATGGGCTGGAGGGCTTTTGATGTACCAGAGCCGTGGTGAAGACACA 1896
||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1850 AACAGATCAGAGCAATGGGCCGGAGGGCTTTTGATGTACCAGAGCCGTGGTGAAGACACA 1909
Query 1897 CTACAAGTTTGGTCCGACAGAGATCGGTCCATTGAGAACAAGGACATAGTGTTGTGGTAT 1956
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1910 CTACAAGTTTGGTCCGACAGAGATCGTTCCATTGAGAACAAGGACATAGTGTTGTGGTAT 1969
Query 1957 ACACTAGGGTTCCATCACGTACCGTGCCAAGAAGATTTTCCAGTGATGCCAACAATAGCA 2016
|||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct 1970 ACACTAGGATTCCATCACATACCGTGCCAAGAAGATTTTCCAGTTATGCCAACAATAGCA 2029
Query 2017 TCTAGCTTTGAACTTAAACCGGTCAATTTCTTCGAATCGAACCCGGTACTTGGGATTTCA 2076
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2030 TCTAGCTTCGAACTGAAACCGGTCAATTTCTTCGAATCGAACCCGGTACTTGGGATCTCA 2089
Query 2077 CCTTTCTTCGAGAAAGACTTACCA---GTCTGTTAAACCAGATGCTTCATCTTATTCGAC 2133
|||||||||||||||||||||||| ||||||| | || ||| |||||||||||| |||
Sbjct 2090 CCTTTCTTCGAGAAAGACTTACCACCAGTCTGTTGA-CCGGATCCTTCATCTTATTTGAC 2148
Query 2134 ACTGTGCATTTTCAAATGTCATGTGTAGACTTTTCTGATTATAAATGTT 2182
||||||||||| |||||||||||| |||||||||| |||||| | ||||
Sbjct 2149 ACTGTGCATTT-CAAATGTCATGTTTAGACTTTTCCGATTATGA-TGTT 2195
> Ahg347467 jgi|Araly1|347467|fgenesh1_pg.C_scaffold_5000859
Length=2064
Score = 2706 bits (1465), Expect = 0.0
Identities = 1850/2037 (91%), Gaps = 21/2037 (1%)
Strand=Plus/Plus
Query 80 TACTTTTAAGCTTACTCTTTCTCTTCACTACTCTCGCGTCAAGTTCCAAGACCCCCCGAT 139
||||||||||||| ||||| |||||| | ||| ||| ||||||||||| || ||||||
Sbjct 38 TACTTTTAAGCTTCCTCTTCCTCTTCGCAACTTTCGGGTCAAGTTCCAGGA---CCCGAT 94
Query 140 TCAAGTATTCGTTAGAGAAGCCTCACCACCCACTTGACCCACTAACGACACCTGAAATAA 199
||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||
Sbjct 95 TCAAGTATTCGTTAGAGAAGCCTCACCACCCGCTTGACCCACTAACGTCACATGAAATAA 154
Query 200 AGAGAGTCCAAACCATCCTCTCGGGTCATGATCCGGGTTTCGGGTCCGGGTCAACCATCA 259
||||||||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 155 AGAGAGTCCGAACCATTCTCTCCGGTCATGATCCGGGTTTCGGGTCCGGGTCAGCCATCA 214
Query 260 TTCACGCCATGGCTCTCGACGAGCCGGATAAGCAACGTGTCATCCGGTGGAAGAAAGGTG 319
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 215 TTCACGCCATGGCTCTCGACGAGCCGGAGAAGCAACGTGTCGTCCGGTGGAAGAAAGGTG 274
Query 320 ATCGTCTCCCGCCGCGAAGAGCGGAGATTCTTGCTATGTCTAACGGCGAGAGTCACGTGC 379
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 275 ATCGTCTCCCGCCGCGAAGAGCGGAGGTTCTTGCGATGTCTAACGGCGAGAGTCACGTGC 334
Query 380 TCACGGTGGATCTTAAATCCGGTCGGGTTGTTTCTGATTTGGTCAACCCGACTTTTGGAT 439
|||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
Sbjct 335 TCACTGTGGATCTTAAATCCGGTCGGGTTGTTTCCGATTTGGTCAACCCCACTTTTGGGT 394
Query 440 ACCCGATTCTTACTATGAAGGATATCATCGCAGTCTCACAGGTTCC-TTACAAGAGCGTG 498
| ||||||||||| ||||| || ||| |||| | ||| |||||||| || |||||| |||
Sbjct 395 ATCCGATTCTTACCATGAATGACATCGTCGCTGCCTCGCAGGTTCCGTT-CAAGAGTGTG 453
Query 499 GAGTTCAATCGCTCAATCGAAGCGCGTGGGATTCCGTTCTCCGGTTTGATTTGTATTACA 558
||||| ||||| |||||||| |||||||||||||||| ||||| |||||| ||||| |||
Sbjct 454 GAGTTTAATCGTTCAATCGAGGCGCGTGGGATTCCGTCCTCCGATTTGATATGTATAACA 513
Query 559 CCGTTC-GCCGGTTGGTATGGACCGGACGAAGAAGGACGACGAGTCATAAAGATCCAATG 617
|| | | || || |||| |||||||||||| ||||| ||| ||||||| |||||||||||
Sbjct 514 CC-TGCAGCTGGATGGTTTGGACCGGACGAGGAAGGGCGAAGAGTCATCAAGATCCAATG 572
Query 618 TTTCTCAAAGCAAGACACTGTCAATTTCTACATGAGACCTATCGAAGGACTTTATTTAAC 677
||| |||||| ||||||| |||||||||||||||||||| || |||||||||||| ||||
Sbjct 573 TTTTTCAAAGAAAGACACCGTCAATTTCTACATGAGACCCATTGAAGGACTTTATCTAAC 632
Query 678 CGTCGATATGGATAAATTAGAGATCATCAAGATTGTAGACAATGGACC-GGTTCCGGTTC 736
||||||||||| |||||||| |||||||||||||| |||||||| || |||||| || |
Sbjct 633 GGTCGATATGGACAAATTAGAAATCATCAAGATTGTTGACAATGG-CCTGGTTCCAGTCC 691
Query 737 CCAAGTCTACCGGTACGGAATATAGATATGGGTTTCTT-AATGAAACGGTATATATGGAC 795
|||||||||||||||| ||||||||| |||| ||| || || ||||| ||| ||||||||
Sbjct 692 CCAAGTCTACCGGTACAGAATATAGACATGGATTT-TTGAACGAAACAGTACATATGGAC 750
Query 796 CGTGTCAACCCAATGTCGATGGAGCAACCGGACGGTCCAAGTTTTCAA-GTTGAGGATGG 854
|| ||||||||||||||||||||||| || ||||||||||| |||||| ||||| |||||
Sbjct 751 CGCGTCAACCCAATGTCGATGGAGCAGCCTGACGGTCCAAG-TTTCAAGGTTGAAGATGG 809
Query 855 ATACTTGGTTAAGTGGGCGAATTGGAAATTTCATATTAAACCGGATCAACGTGCCGGTAT 914
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 810 ATACTTGGTTAAGTGGGCGAATTGGAAATTTCATATTAAACCGGACCAACGTGCCGGTAT 869
Query 915 GATTATCTCACAGGCTACAGTTCGTGATTCCAAGACAGGTGAAGCAAGAAGTGTAATGTA 974
||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||
Sbjct 870 GATCATCTCACAGGCTTCAGTTCGTGATTCCAAGACAGGTGAAGCAAGAAGTGTGATGTA 929
Query 975 CAAAGGTTTTGCGTCGGAGTTGTTCGTACCGA-ATATGGATCCAGGGGAAGGTTGGTATT 1033
||||||||||||||||||||||| |||||| | | ||||| |||| |||||||||||| |
Sbjct 930 CAAAGGTTTTGCGTCGGAGTTGTACGTACC-ATACATGGACCCAGAGGAAGGTTGGTACT 988
Query 1034 CAAAAGCTTACATGGATGCTGGAGAGTTTGGTTTAGGACCTTCTTCAATGCCACTTGTGC 1093
| ||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 989 CCAAAGCTTTTATGGATGCTGGAGAGTTTGGTTTAGGACCTACTTCAATGCCGCTTGTGC 1048
Query 1094 CACTCAACGACTGTCCTCGAAACGCTTACTACATTGATGGTTTCTTCGCTTCTCCTGAAG 1153
|||| |||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||
Sbjct 1049 CACTTAACGACTGTCCTCGAAACGCTTACTACATTGACGGTATCTTTGCTTCTCCTAAAG 1108
Query 1154 GC-ATTCCAATACTTCAACCTAACATGATCTGCTTGTTCGAACGCTACGCGGGTGACACT 1212
|| | ||| || ||||| |||||||||||||||||||| ||||||||||| || ||||||
Sbjct 1109 GCGA-TCCCATCCTTCAGCCTAACATGATCTGCTTGTTTGAACGCTACGCCGGCGACACT 1167
Query 1213 AGCTGGCGACACTCTGAGATTCTTCTCCCTGGTGTAGATATAAGAGAGTCAAGGGCAAAG 1272
|||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1168 AGCTGGCGCCACTCTGAGATTCTTCTCCCTGGTACAGATATAAGGGAGTCAAGGGCAAAG 1227
Query 1273 GTTACACTGGTAGCTAGAATGGCATGTTCTGTTGGGAACTATGATTATATTTTTGATTGG 1332
|| || ||||| ||||||||||| ||||| |||||||||||||| |||| |||||||||
Sbjct 1228 GTGACGCTGGTGGCTAGAATGGCTTGTTCGGTTGGGAACTATGACTATACGTTTGATTGG 1287
Query 1333 GAGTTTCAAATGGATGGTGTGATTCGTGTTACGGTCGCGGCCTCGGGGATGTTGATGGTG 1392
|||||||||||||||||| ||||||| ||||||||||| ||||| |||||||||||||||
Sbjct 1288 GAGTTTCAAATGGATGGTTTGATTCGCGTTACGGTCGCAGCCTCAGGGATGTTGATGGTG 1347
Query 1393 AAAGGAACGGCTTACGA-AAACGTTGAAGACTTGGGTGAGAAAGAGGATGATTCTGGACC 1451
||||| ||| ||||| | |||||| ||||||||||||||||||| | ||||||||||||
Sbjct 1348 AAAGGGACGCCTTAC-ACAAACGTACAAGACTTGGGTGAGAAAGAAGCTGATTCTGGACC 1406
Query 1452 GTTGATCTCAGAAAACGTTATAGGAGTCGTCCATGATCATTTCATATCGTTTCATCTAGA 1511
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1407 TTTGATCTCAGAAAACGTTATAGGAGTCGTCCATGATCATTTCATAACGTTTCATCTAGA 1466
Query 1512 CATGGACATTGATGGGTCAGCCAACAACTCCTTCGTTAAGGTTCATCTAGAGAAGCAGAG 1571
||| |||||||| | | | ||||||||||||||||| |||||||||||||||||||||||
Sbjct 1467 CATAGACATTGACGAGCCCGCCAACAACTCCTTCGTCAAGGTTCATCTAGAGAAGCAGAG 1526
Query 1572 ACTTCCACCTGGAGAATCAAGGAGAAAGAGTTACTTGAAGGTCAAGAAATATGTAGCCAA 1631
|||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1527 ACTTCCGCCTGGTGGATCAAGGAGAAAGAGTTACTTGAAGGTCAAGAAATATGTAGCCAA 1586
Query 1632 GACTGAGAAAGATGCTCAGATCAAGATGAGCCTGTACGACCCCTACGAGTTCCATCTTGT 1691
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1587 GACTGAGAAAGATGCTCAGATCAAGTTGAGCATGTACGACCCCTACGAGTTCCATCTTGT 1646
Query 1692 GAACCCTAAC-CGACTTTCTCGGTTAGGGAACCCGGCTGGTTACAAGCTTGTACCTGGTG 1750
|||||||| | || | ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1647 GAACCCTA-CTCGTCGGTCTCGTTTAGGGAACCCGGCTGGTTACAAGCTTGTGCCTGGTG 1705
Query 1751 GTAATGCTGCAAGTTTGCTCGATCATGATGATCCACCGCAAATGCGAGGCGCTTTCACAA 1810
||||||||||||||||||| |||||||||||||| || ||||| |||| ||||||||||
Sbjct 1706 GTAATGCTGCAAGTTTGCTTGATCATGATGATCCGCCACAAATTAGAGGGGCTTTCACAA 1765
Query 1811 ACAATCAGATATGGGTGACTCGGTATAACCGGTCAGAGCAATGGGCTGGAGGGCTTTTGA 1870
|||| | |||||||||||| ||||||||||||||||||||||||||||| || |||||||
Sbjct 1766 ACAACCGGATATGGGTGACACGGTATAACCGGTCAGAGCAATGGGCTGGTGGCCTTTTGA 1825
Query 1871 TGTACCAGAGCCGTGGTGAAGACACACTACAAGTTTGGTCCGACAGAGATCGGTCCATTG 1930
||||||||||||||||||||||||| |||||||||||||| ||| | ||||| || ||||
Sbjct 1826 TGTACCAGAGCCGTGGTGAAGACACGCTACAAGTTTGGTCGGACCGGGATCGTTCGATTG 1885
Query 1931 AGAACAAGGACATAGTGTTGTGGTATACACTAGGGTTCCATCACGTACCGTGCCAAGAAG 1990
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1886 AGAACGAGGACATAGTGTTGTGGTATACATTAGGGTTCCATCACGTACCGTGCCAAGAAG 1945
Query 1991 ATTTTCCAGTGATGCCAACAATAGCATCTAGCTTTGAACTTAAACCGGTCAATTTCTTCG 2050
| ||||| || |||||||| |||||| |||||||||||||||||||||| |||||||| |
Sbjct 1946 ACTTTCCGGTTATGCCAACGATAGCAGCTAGCTTTGAACTTAAACCGGTTAATTTCTTTG 2005
Query 2051 AATCGAACCCGGTACTTGGGATTTCACCTTTCTTCGAGAAAGACTTACCAGTCTGTT 2107
|||| |||||| | |||||||| |||||||||||||||||||||| | ||||||||
Sbjct 2006 AATCAAACCCGATTCTTGGGATCACACCTTTCTTCGAGAAAGACTTGCAAGTCTGTT 2062
> Ahg475070 jgi|Araly1|475070|fgenesh2_kg.2__200__AT1G62810.1
Length=2346
Score = 1413 bits (765), Expect = 0.0
Identities = 1606/2010 (80%), Gaps = 66/2010 (3%)
Strand=Plus/Plus
Query 153 AGAGAAGCCTCACCACCCACTTGACCCACTAACGACACCTGAAATAAAGAGAGTCCAAAC 212
||| |||||||| || |||||||| ||||||||| | ||||| |||||| | |||
Sbjct 362 AGAAAAGCCTCATCATCCACTTGATCCACTAACGGTGCGAGAAATCTCGAGAGTTCGAAC 421
Query 213 CATCCTCTCGGGTCATGATCCGGGTTTCGGGTCCGGGTCAACCATC-ATTCACGCCATGG 271
||| |||||||||||||| |||||||| || |||||||| ||| | |||||| ||||||
Sbjct 422 CATACTCTCGGGTCATGACCCGGGTTTTGGTTCCGGGTCGGCCA-CGATTCACTCCATGG 480
Query 272 CTCTCGACGAGCCGGATAAGCA-ACGTGTCATCCGGTGGAAGAAAGGTGAT-CGTCTCCC 329
||||||| ||||| || ||| | ||||||| | | ||||||||| || || | || ||
Sbjct 481 CTCTCGATGAGCCAGAGAAG-ACACGTGTCGTTCAGTGGAAGAAGGGAAATAAG-CTTCC 538
Query 330 GCCGCGAAGAGCGGAGATTC-TTGC-TATGTCTAACGG-CGAGAGTCACGTGCTCACGGT 386
| | |||||||| | | || | || ||| | || | | | || | | | |||||
Sbjct 539 GTCACGAAGAGCTGCG-GTCGTAGCTTAT-TGGGGTGGTC-AAACACATGAGATAACGGT 595
Query 387 GGATCTTAAATCCGGTCGGGTTGTTTCTGAT-TTGGTCAACCCGACTTTTGGATACCCGA 445
||||||| | || |||||||| ||||||||| || || |||| ||||| || || ||||
Sbjct 596 GGATCTTGATTCGGGTCGGGTCGTTTCTGATGTT-GTTAACCGGACTTCAGGGTATCCGA 654
Query 446 TTCTTA-CTATGAAGGATATCATCGCAGTC-TCACAGGTTCCTTACAAGAGCGTGGAGTT 503
||| | || |||| || || |||| | | || |||||||||| |||||| |||| ||
Sbjct 655 CTCTCACCT-TGAACGACGTCTTCGC-GGCTTCGCAGGTTCCTTTGAAGAGCTTGGAATT 712
Query 504 CAATCGCTCAATCGAAGCGCGTGGGATTCCGTTCTCCGGTTTGA-TTTGTATTACACCGT 562
||| ||||| ||||||||||||||| || ||| |||| ||| | ||| ||||||||||
Sbjct 713 CAACCGCTCGATCGAAGCGCGTGGGGTTAAGTTTTCCGATTT-AGCTTGCATTACACCGT 771
Query 563 TCGCCGGTTGGTATGGACCGGACGAAGAAGGACG-ACGAGTCATAAAGA-TCCAATGTTT 620
| || || |||| ||||| || ||||||||||| | ||||||| |||| |||||||||
Sbjct 772 TTGCGGGATGGTTTGGACATGAGGAAGAAGGACGTA-GAGTCAT-AAGAGTCCAATGTTA 829
Query 621 CTC-AAAGCAAGACACTGTC-AATT-TCTACATGAGACCTA-TCGAAGGACTTTATTTAA 676
| | | |||| |||| | |||| | | |||||||| | ||||||| |||||| |||
Sbjct 830 CACGTTA-CAAGGCACT-ACTAATTAT-TTTATGAGACC-ACTCGAAGGTCTTTATGTAA 885
Query 677 CCGTCGATATGGATAAATTAG-AGATCATCAAGATTGTAGACAATGGACCGGTTCCGGTT 735
| ||||| | || ||||| | || | |||||||| || || || || || ||||| ||
Sbjct 886 CGGTCGACCTAGACAAATTGGAAG-TTATCAAGATCGTCGATAAAGGCCCAATTCCGATT 944
Query 736 CCC-AAGTCTACCGGTACGGAATATAGATATGGGT-TTCTTAATGAAA-CGGTATATATG 792
||| ||| || ||||||| ||||| | | | ||| ||| ||| ||| |||| |||||
Sbjct 945 CCCAAAGCCT-CCGGTACAGAATACCGGT-TTGGTGTTCAGAAT-AAACCGGTGCATATG 1001
Query 793 GACCGTGTCAACCCAATGTCGATGGAGCAACCGGACGGTCCAAGTTTTCA-AGTTGAGGA 851
|| || | ||||| || ||||||||||||||||| ||||| |||||| | || || ||
Sbjct 1002 GATCGAATTAACCCGATTTCGATGGAGCAACCGGATGGTCCTAGTTTT-AGGGTCGAAGA 1060
Query 852 TGGATACTTGGTTAAGTGGGCGAATTGGAAATTT-CATATTAAACCGGATCAACGTGCCG 910
|||| | |||||||||||||| |||||| ||| ||| ||||| | || ||||| ||||
Sbjct 1061 TGGACATTTGGTTAAGTGGGCTAATTGG-GTTTTCCATGTTAAAGCAGACCAACGAGCCG 1119
Query 911 GTATGATTATCTCACAGGCTACAGTTCGTGATTCCAAGACAGGTGAAGCAAGAAGTGTAA 970
||||||| || || ||||| || |||||||| ||| ||||||||||| |||||||||| |
Sbjct 1120 GTATGATCATATCTCAGGCCACGGTTCGTGACTCCGAGACAGGTGAACCAAGAAGTGTGA 1179
Query 971 TGTACAAAGGTTTTGCGTCGGAGTTGTTCGTACCGAATATGGATCCAGGGGAAGGTTGGT 1030
|||||||||| || | || |||||||| |||||| | |||||||| | |||||| ||||
Sbjct 1180 TGTACAAAGGGTTCCCATCAGAGTTGTTTGTACCGTACATGGATCCCGAGGAAGGATGGT 1239
Query 1031 A-TTCAAAAGCTTACATGGATGCTGGAGAGTTTGGTTTAGGACCTTCTTCAATGCCACTT 1089
| | | |||| ||| |||||||| || ||| | ||||||||||| | | ||||| ||
Sbjct 1240 ACTAC-AAAGGTTATATGGATGCAGGCGAGCTCGGTTTAGGACCCACAGCCATGCCGCTC 1298
Query 1090 GTGCCACTCAACGACTGTCCTCGAAACGCTTACTACATTGATGGT-TTCTTCGCTTCTCC 1148
||||| |||||||| || |||||||| ||||||||||| || ||| || ||||| |||||
Sbjct 1299 GTGCCCCTCAACGATTGCCCTCGAAATGCTTACTACATAGACGGTGTT-TTCGCCTCTCC 1357
Query 1149 TGAAGGCATTCCAATACTTCAACCTAACATGATCTGCTTGTTCGAACGCTACGCGGGTGA 1208
|| |||| || || |||||||||| ||||| |||||||| |||||||| || || ||
Sbjct 1358 AGACGGCACACCCATTGTTCAACCTAATATGATATGCTTGTTTGAACGCTATGCAGGCGA 1417
Query 1209 CACT-AGCTGGCGACACTCTGAGATTC-TTCTCCCTGGTGTAGATATAAGAGAGTCAAGG 1266
|| | ||||||||||| |||||||| | || | || || ||||||||||||||||||
Sbjct 1418 CA-TCAGCTGGCGACATTCTGAGATCCTTTTTACC-AATGCCGATATAAGAGAGTCAAGG 1475
Query 1267 GCAAAGGTTACACTGGTAGCTAGAATGGCATGTTCTGTTGGGAACTATGATTATATTTTT 1326
|||| |||||| |||| ||| |||||||| ||| ||||| || || || ||||||||
Sbjct 1476 CCAAAAGTTACATTGGTCGCTCGAATGGCAACTTCGGTTGGAAATTACGACTATATTTTC 1535
Query 1327 GATTGGGAGTTTCA-AATGGATGGTGTGATTCGTGTTACGGTCGCGGCCTCGGGGATGTT 1385
|||||||||||||| | | |||||| | || ||||||||||||||||| ||||| |||||
Sbjct 1536 GATTGGGAGTTTCAGACT-GATGGTTTAATCCGTGTTACGGTCGCGGCTTCGGGAATGTT 1594
Query 1386 GATGGTGAAAGGAACGGCTTACGAAAACGTTGAAGACTTGGGTGAGAAAGAGGATGATTC 1445
||||||||||| || |||| || || || || ||||| ||||| | |||||||||||
Sbjct 1595 AATGGTGAAAGGGACACCTTATGATAATGTAGATGACTTAGGTGATATGGAGGATGATTC 1654
Query 1446 TGGACCGTTGATCTCAGAAAACGTTATAGGAGTCGTCCATGATCATTTCATATCGTTTCA 1505
||||||||||||||| || || || || |||||||||||||||||||||||| |||||||
Sbjct 1655 TGGACCGTTGATCTCTGAGAATGTGATTGGAGTCGTCCATGATCATTTCATAACGTTTCA 1714
Query 1506 TCTAGACATGGACATTGATGGGTCAGCCAACAACTCCTTCGTT-AAGGTTCATCTAGAGA 1564
||||||||||||||||||||| || || || | ||| ||| ||||||||||||||||
Sbjct 1715 TCTAGACATGGACATTGATGGACCAATGAATAA-TTCTTTGTTCAAGGTTCATCTAGAGA 1773
Query 1565 AGCAGAGACTTCCACCTGGAGAATCAAGGAGAAAGAGTTACTTGAAGGTCAAGAAATATG 1624
|||||||| ||||| | ||| |||| ||| ||||||||||||||| ||||||||||
Sbjct 1774 AGCAGAGAGTTCCAACAGGAAAATCGCCGAGGAAGAGTTACTTGAAGATCAAGAAATACA 1833
Query 1625 TAGCCAAGACTGAGAAAGATGCTCAGATCAAGAT-GAGCCTGTACGACCCCTACGAGTTC 1683
||||||||||||||||||||||||||||||| || |||| | || ||||| || || |||
Sbjct 1834 TAGCCAAGACTGAGAAAGATGCTCAGATCAA-ATTGAGCATTTATGACCCATATGAATTC 1892
Query 1684 CATC-TTGTGAACCCTAACCGACTTTCTCGGTTAGGGAACCCGGCTGGTTACAAGCTTGT 1742
|| | |||||||||| |||||| |||||| | || |||| ||||||||||| | | |
Sbjct 1893 CA-CATTGTGAACCCGAACCGAAAATCTCGGATCGGAAACCTGGCTGGTTACAGGATCAT 1951
Query 1743 ACCTGGTGGTAATGCTGCAAGTTTGCTCGATCATGATGATCCACCGCAAATGCGAGGCGC 1802
||| ||||||||||| || |||||||| ||||| || ||||| || ||||| ||||| ||
Sbjct 1952 ACCGGGTGGTAATGCAGCGAGTTTGCTTGATCACGACGATCCTCCTCAAATTCGAGGTGC 2011
Query 1803 TTTCACAAACAATCAGATATGGGTGACTCGGTATAACCGGTCAGAGCAATGGGCTGGAGG 1862
||||| || ||||||||||||||||||| |||||||||||||| |||| ||||||||
Sbjct 2012 ATTCACCAATAATCAGATATGGGTGACTCCATATAACCGGTCAGAACAATTTGCTGGAGG 2071
Query 1863 -GCTTTTGATGTACCAGAGCCGTGGTGAAGACACACTACAAGTTTGGTCCGACAGAGATC 1921
| || | || |||||||||| ||||| |||||||||||||||||||| ||| | || |
Sbjct 2072 AG-TTCTAATTTACCAGAGCCAAGGTGATGACACACTACAAGTTTGGTCAGACCGGGACC 2130
Query 1922 GGTCCATTGAGAACAAGGACATAGTGTTGTGGTATACACTAGGGTTCCATCACGTACCGT 1981
| || || || ||||||||||||||| ||||||| ||||||||||||||||||||||| |
Sbjct 2131 GTTCGATCGAAAACAAGGACATAGTGCTGTGGTACACACTAGGGTTCCATCACGTACCTT 2190
Query 1982 GCCAAGAAGATTTTCCAGTGATGCCAACAATAGCATCTAGCTTTGAACTTAAACCGGTCA 2041
|||||||||||| ||| || |||||||| | ||| |||||||||| |||||||||| ||
Sbjct 2191 GCCAAGAAGATTATCCGGTTATGCCAACCGTCGCAGCTAGCTTTGAGCTTAAACCGGCCA 2250
Query 2042 ATTTCTTCGAATCGAACCCGGTACTTGGGATTTCACCTTTCTTCGAGAAAGACTTACCAG 2101
||||||| ||||| || ||| | |||||| | | ||||||||||| |||||||||||||
Sbjct 2251 ATTTCTTTGAATCCAATCCGATTCTTGGGGCTGCTCCTTTCTTCGAAAAAGACTTACCAG 2310
Query 2102 TCTGTTAAACCAGATG-CTTCATCTT-ATT 2129
||||| | ||| | || |||| |||| |||
Sbjct 2311 TCTGT-AGACC-GTTGGCTTCGTCTTGATT 2338
> Ahg936921 jgi|Araly1|936921|scaffold_501112.1
Length=455
Score = 529 bits (286), Expect = 4e-149
Identities = 395/447 (88%), Gaps = 10/447 (2%)
Strand=Plus/Plus
Query 1280 TGGTAGCTAGAATGGCATGTTCTG-TTGGGAACTATGATTATATTTTTGATTGGGAGTTT 1338
|||| ||||||||||| ||||| | |||||||||||||||||| |||||||||||||||
Sbjct 10 TGGTGGCTAGAATGGCGTGTTC-GATTGGGAACTATGATTATACGTTTGATTGGGAGTTT 68
Query 1339 CAAATGGATGGTGTGATTCGTGTTACGGTCGCGGCCTCGGGGATGTTGATGGTGAAAGGA 1398
|||||||||||| ||| ||| |||| ||||| ||||| ||||||||||||||||||||
Sbjct 69 CAAATGGATGGTTTGAATCGCGTTATAGTCGCAACCTCGTGGATGTTGATGGTGAAAGGA 128
Query 1399 ACGGCTTACGA-AAACGTTGAAGACTTG-GGTGAGAAAGAGGATGATTCTGGACCGTTGA 1456
|| | ||| | |||||| |||||||| || |||||||| | |||||||||||| ||||
Sbjct 129 ACATCATAC-ACAAACGTACAAGACTTGAGG-GAGAAAGAAGCTGATTCTGGACCTTTGA 186
Query 1457 TCTCAGAAAACGTTATAGGAGTCGTCCATGATCATTTCATATCGTTTCATCTAGACATGG 1516
||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||
Sbjct 187 TCTCAGAAACCGTTATAGGAGTTGTCCATGATCATTTCTTATCGTTTCATCTAGACATGG 246
Query 1517 ACATTGATGGGTC-AGCCAACAACTCCTTCGTTAAGGTTCATCTAGAGAAGCAGAGACTT 1575
| ||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 247 ATATTGACGGG-CTAGCTAACAACTCCTTCGTTAAGGTTCATCTAGAGAAGCAGAGACTT 305
Query 1576 CCACCTGGAGAATCAAGGAGAA-AGAGTTACTTGAAGGTCAAGAAATATGTAGCCAAGAC 1634
|| |||||| |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 306 CCGCCTGGAAAATCAAGGAGAACA-AGTTACTTGAAGGTCAAGAAATATGTAGCCAAGAC 364
Query 1635 TGAGAAAGATGCTCAGATCAAGATGAGCCTGTACGACCCCTACGAGTTCCATCTTGTGAA 1694
||||||||||||||| | |||| |||| ||||||| || || ||||||||||||||||
Sbjct 365 TGAGAAAGATGCTCATAACAAGTTGAGTATGTACGATCCTTATAAGTTCCATCTTGTGAA 424
Query 1695 CCCTAACCGACTTTCTCGGTTAGGGAA 1721
||||||| ||| |||| ||||||||
Sbjct 425 CCCTAACTGACAGTCTCATTTAGGGAA 451
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 85703051250
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5