BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G43750.1 Length=1041 Score E Sequences producing significant alignments: (Bits) Value Ahg897125 jgi|Araly1|897125|Al_scaffold_0005_1091 968 0.0 Ahg897355 jgi|Araly1|897355|Al_scaffold_0005_1321 534 4e-151 Ahg936973 jgi|Araly1|936973|scaffold_501164.1 464 5e-130 Ahg347642 jgi|Araly1|347642|fgenesh1_pg.C_scaffold_5001034 388 3e-107 Ahg897345 jgi|Araly1|897345|Al_scaffold_0005_1311 294 7e-79 Ahg323077 jgi|Araly1|323077|fgenesh1_pm.C_scaffold_5000621 183 2e-45 Ahg897338 jgi|Araly1|897338|Al_scaffold_0005_1304 152 5e-36 Ahg937218 jgi|Araly1|937218|scaffold_501409.1 147 2e-34 Ahg897469 jgi|Araly1|897469|Al_scaffold_0005_1435 110 3e-23 > Ahg897125 jgi|Araly1|897125|Al_scaffold_0005_1091 Length=798 Score = 968 bits (524), Expect = 0.0 Identities = 681/754 (90%), Gaps = 22/754 (3%) Strand=Plus/Plus Query 283 ATGGGGAGATCC-ACGCCGGAGCAAGATAACATTGCCATGCTAATGAATGATGTGCAACG 341 |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGGGAGATCCGTC-CCGGAGCAAGATAACATTGCCATGCTAATGAATGATGTGCAACG 59 Query 342 CATGAGACAACAATTGAGATATAGTAATCCTATTCTGGTGACTAGAGATCAAATTAGCTT 401 |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||| Sbjct 60 CATGAGACAACAATTGTCATCTAGTAATCCCATTCTGGTGACTAGAGATCAAATTAGCTT 119 Query 402 TGCTTATAAGCTTGCAATGGAAACAGTAGTTTCCGAGATCAGCATATGTATGCCTGCGAC 461 ||||||||||||||||||||||||||||| ||| || ||||||||| ||||||||||||| Sbjct 120 TGCTTATAAGCTTGCAATGGAAACAGTAGCTTCGGATATCAGCATACGTATGCCTGCGAC 179 Query 462 TTGCAGCATCTGTTTCAATAATGTTTTGGAAGCTGAGAAGATGTTTTCTGTT-GCTATAT 520 ||||||||||||||||||| ||| ||||||||||||| |||||| ||||||| || ||| Sbjct 180 TTGCAGCATCTGTTTCAATGATGATTTGGAAGCTGAGCAGATGTATTCTGTTCCCT-TAT 238 Query 521 GCGGTCATCAATTCTGTGTGGAGTGCGTGAAAC-ATTATATAGAAGTGAAGCTACTCGAG 579 ||||||||||||||||||| |||||||||| || | |||||||||||| |||||||||| Sbjct 239 GCGGTCATCAATTCTGTGTCGAGTGCGTGAGACGA-CATATAGAAGTGAGGCTACTCGAG 297 Query 580 GGAGGTGTACCGAGATGTCTTGATTATCAATGCGAGTCTAAGCTAACTCTTACAAGTTGT 639 ||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 298 GGAAGTGTACCGACATGTCTTCATTATCAATGCGAGTCTAAGCTAACTCTTAGAAGTTGT 357 Query 640 GGCAATCTTTTAACACCTAAACTAAAGGCGATAT-GGAAGCAAAGGATCGAAGAGGAGTT 698 | |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||| || Sbjct 358 GACAATCTTTTAACACCTAAACTAAAAGCGATATGGGAA-CAAAGGATCGAAGAGGAATT 416 Query 699 GATTCTTGTAG-CGGAGAGAGTTTATTGTCCAAACCCGAGGTGCTCGGGATTAATGTCGA 757 ||||| ||| | |||| ||||||||||||||||| |||| |||| ||||||||||||||| Sbjct 417 GATTCCTGT-GCCGGATAGAGTTTATTGTCCAAAACCGACGTGCGCGGGATTAATGTCGA 475 Query 758 AAACCGAGCTCTCTACATCAACTGAAGAAGATGTAA-GTACTAGGACTTGTTGTGTTAAA 816 |||||||||| ||||| |||||||||||||||| || ||| ||||| ||||||||| ||| Sbjct 476 AAACCGAGCTTTCTACCTCAACTGAAGAAGATG-AAGGTAGTAGGAGTTGTTGTGTCAAA 534 Query 817 TGCGGTGAACCCTTTTGCATCAACTGCAAAGTTCCGTGGCATAGTAACTTGTCATGCGAT 876 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 TGCGGTGAACCCTTTTGCATCAACTGCAAAGTTCCGTGGCATAGTAACTTGTCATGCGAT 594 Query 877 GATTACAAGAGATTGGGTCCAAATCCTACAAAAAATGAT-ATAAAGCTAAAAGTTTTGGC 935 |||||||||||||| |||| |||||||||| ||||||| | ||| ||||||||| | || Sbjct 595 GATTACAAGAGATTAGGTCTGAATCCTACAACAAATGATGAAAAA-CTAAAAGTTCTAGC 653 Query 936 AAATCAGCAAAA-GTGGAGTCAATGTGCAAAGTGCCAACACATGATTGCACGTATCGAA- 993 ||||||| |||| |||| ||||||||| ||||||| |||||||||| | || | ||||| Sbjct 654 AAATCAG-AAAATGTGGCGTCAATGTGAAAAGTGCAAACACATGATCGAACTT-TCGAAA 711 Query 994 GGATGCAACG-TAATAATCT-GCAGGTATCATCA 1025 ||||||| | | ||| || ||||||||||||| Sbjct 712 GGATGCATCCATG-TAA-CTTGCAGGTATCATCA 743 > Ahg897355 jgi|Araly1|897355|Al_scaffold_0005_1321 Length=819 Score = 534 bits (289), Expect = 4e-151 Identities = 587/726 (81%), Gaps = 40/726 (6%) Strand=Plus/Plus Query 301 GAGCAAGATAACATTGCCATGCTAATGAATGATGTGCAACGCATGAGACAACAATTGA-G 359 |||||||| ||||| || |||||||| |||||||||||||||| ||||||| ||||| | Sbjct 79 GAGCAAGAGAACATCGCTTTGCTAATGGATGATGTGCAACGCATTAGACAACGATTGACG 138 Query 360 ATATAG-TAATCCTATTCTGGTGACTA-GAGATCAAATTAGCTTTGCT-TAT-AAGCTTG 415 | ||| | |||| |||||||||||| || ||||||| | |||| | ||| || |||| Sbjct 139 -TCTAGCT-TTCCTGTTCTGGTGACTAGGA-ATCAAATGAAATTTG-TGTATGAA-CTTG 193 Query 416 CAATGGAAACAGTAGTTTCCGAGATCAGCATATGTATGCCTG--C-------GACTTGCA 466 ||||||||||| ||||||| || ||||||||| ||| |||| | |||||||| Sbjct 194 CAATGGAAACAATAGTTTCTGAAATCAGCATACATATACCTGATCAGAAGAAGACTTGCA 253 Query 467 GCATCTGTTTCAATAATGTTTTGGAAGCTGAGAAGATGTTTTCTGTTGCTATATGCGGTC 526 | || |||| | || || || ||| ||||| ||||||||||| ||| | ||||||||| Sbjct 254 GTATTTGTTCCGATGATAACTTCGAACCTGAGCAGATGTTTTCTATTGATTTATGCGGTC 313 Query 527 ATCAATTCTGTGTGGAGTGCGTGAAAC-ATTATATAGAAGTGAAGCTACTCGAGGGAGGT 585 || ||||||||||||||||| |||||| | |||||||||||| |||||||| ||||||| Sbjct 314 ATGAATTCTGTGTGGAGTGCATGAAACGA-CATATAGAAGTGAGGCTACTCGCGGGAGGT 372 Query 586 GTACCGAGATGTCTTGATTATCAATGCGA-GTCTAAGCTAACTCTTACAAGTTGTGGCAA 644 ||||||||||||| | ||||||||||| | |||||| || |||||| ||| |||| ||| Sbjct 373 GTACCGAGATGTCCTCATTATCAATGC-AGGTCTAAACTTACTCTTGGAAGCTGTGTCAA 431 Query 645 TCTTTTAACACCTAAACTAAAGGCGATAT-GGAAGCAAAGGATCGAAGAGGAGTTGATTC 703 |||||| ||| |||||||||| || || | |||| | || ||||| ||||| | ||||| Sbjct 432 TCTTTTGACATCTAAACTAAAAGCAATGTGGGAA-CGAATAATCGACGAGGAATCGATTC 490 Query 704 TTGTAGCGGAGAGAGTTTATTGTCCAAACCCGAGGTGCTCGGGATTAATGTCGAAAACCG 763 ||| ||||| ||||||||||||||||||||||||||||| | ||||||||| |||| Sbjct 491 ATGTGGCGGACAGAGTTTATTGTCCAAACCCGAGGTGCTCAGCCTTAATGTCGGTAACCA 550 Query 764 AGCTCT----CT-ACA-TCAACTGAAGAAGATGTAAGTACTAGGACTTGTTGTGTT-AAA 816 |||||| || | | || ||| |||||||||| | |||| || | ||| || ||| Sbjct 551 AGCTCTCAAACTCAAACTCTACTAAAGAAGATGT-A--ACTATGAGAAGCTGT-TTCAAA 606 Query 817 TGCGGTGAACCCTTTTGCATCAACTGCAAAGTTCCGTGGCATAGTAACTTGTCATGCGAT 876 ||| ||||||||||||| |||| ||||||||||||||||||||| |||||||| ||| | Sbjct 607 TGCAGTGAACCCTTTTGTATCACCTGCAAAGTTCCGTGGCATAGCAACTTGTCGTGCAAC 666 Query 877 GATTACAAGAGATTGGGTCCAAATCCTACAAAAAATGATATAAAGCTAAAAGTTTTGGCA 936 |||||||||||||||||||||||||||||| | ||||||||||| | |||| | | ||| Sbjct 667 GATTACAAGAGATTGGGTCCAAATCCTACAGCAGATGATATAAAGATGAAAGCTCTAGCA 726 Query 937 AATCAGCAAAA-GTGGAGTCAATGTGCAAAGTGCCAACACATGATTGCACGTATCG-AAG 994 || || |||| |||| ||||||||| ||| || |||||||| || | || | ||| ||| Sbjct 727 TATAAG-AAAATGTGGCGTCAATGTGAAAATTGTCAACACATAATCGAACTT-TCGGAAG 784 Query 995 GATGCA 1000 |||||| Sbjct 785 GATGCA 790 > Ahg936973 jgi|Araly1|936973|scaffold_501164.1 Length=506 Score = 464 bits (251), Expect = 5e-130 Identities = 277/290 (96%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 727 CCAAACCCGAGGTGCTCGGGATTAATGTCGAAAACCGAGCTCTCTACATCAACTGAAGAA 786 ||||| |||| |||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1 CCAAAACCGACGTGCGCGGGATTAATGTCGAAAACCGAGCTTTCTACCTCAACTGAAGAA 60 Query 787 GATGTAAGTACTAGGACTTGTTGTGTTAAATGCGGTGAACCCTTTTGCATCAACTGCAAA 846 |||| | ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 61 GATGGAGGTAGTAGGAGTTGTTGTGTCAAATGCGGTGAACCCTTTTGCATCAACTGCAAA 120 Query 847 GTTCCGTGGCATAGTAACTTGTCATGCGATGATTACAAGAGATTGGGTCCAAATCCTACA 906 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTCCGTGGCATAGTAACTTGTCATGCGATGATTACAAGAGATTGGGTCCAAATCCTACA 180 Query 907 AAAAATGATATAAAGCTAAAAGTTTTGGCAAATCAGCAAAAGTGGAGTCAATGTGCAAAG 966 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| Sbjct 181 AAAAATGATATAAAGCTAAAAGTTTTGGCAAATCAGCAAAAGTGGCGTCAATGTGGAAAG 240 Query 967 TGCCAACACATGATTGCACGTATCGAAGGATGCAACGTAATAATCTGCAG 1016 ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 241 TGCCAACACATGATTGCACGTATCGAAGGATGCAACGTAGTAATCTGCAG 290 > Ahg347642 jgi|Araly1|347642|fgenesh1_pg.C_scaffold_5001034 Length=690 Score = 388 bits (210), Expect = 3e-107 Identities = 450/562 (80%), Gaps = 31/562 (6%) Strand=Plus/Plus Query 450 TATGCCTGCGACTTGCAGCATCTGTTTCAATAATGTTTTGGAAGCTGAGAAGATGTTTTC 509 |||||||||||||||| | ||||||||| | ||| |||||||||||| |||||||||| Sbjct 36 TATGCCTGCGACTTGCTGTATCTGTTTCGACCATGACTTGGAAGCTGAGCAGATGTTTTC 95 Query 510 TGTTGCTATATGCGGTCATCAATTCTGTGTGGAGTGCGTGAAAC-ATTATATAGAAGTGA 568 |||| | ||||| |||||||||||||||||||||||||||||| || |||||||||| | Sbjct 96 TGTTTATTTATGCCGTCATCAATTCTGTGTGGAGTGCGTGAAACGAT-ATATAGAAGTAA 154 Query 569 AGCTACTCGAGGGAGGTGTACCGAGATGTCTTGATTATCAATGCGAGTCTAAGCTAACTC 628 ||||| | ||||||||||||| ||||||| | ||||||||||||||||||||||||||| Sbjct 155 AGCTAGTTGAGGGAGGTGTACTAAGATGTCCTCATTATCAATGCGAGTCTAAGCTAACTC 214 Query 629 TTACAAGTTGTGGCAATCTTTTAACACCTAAACTAAAG-G-CGATATGG-AAGCAAAGGA 685 ||| |||||||| |||| |||| |||| ||||| |||| | | || ||| || | ||||| Sbjct 215 TTAGAAGTTGTGACAATATTTTGACACATAAAC-AAAGAGAC-ATGTGGGAA-CGAAGGA 271 Query 686 -TCGAAGAGGAGTT-GATTCTTGT-AGCGGAGAGAGTTTATTGTCCAAACCCGAGGTGCT 742 | || || || | | ||| || | |||| || ||||| || ||||| || ||||||| Sbjct 272 ATAGA-GAAGAATCAG-TTCCTGCGA-CGGACAGGGTTTACTGCCCAAATCCAAGGTGCT 328 Query 743 CGGGATTAATGTCGAAAACCGAGCTCTCTACATCAACTGAAGAAGATGTAAGT-ACTAGG 801 ||| |||||||||||| |||||||||| | ||||||| |||||| || | || | || Sbjct 329 CGGCTTTAATGTCGAAAGCCGAGCTCTCCAAATCAACTAAAGAAGCTGGA-GTTAAGAG- 386 Query 802 ACTTGTTGTGTTAAATGCGGTGAACCCTTT-TGCATCAACTGCAAAGTTCCGTGGCATAG 860 || |||| || |||||| | |||| ||| ||||| |||||||||||| |||||||| Sbjct 387 AC--GTTGCGTCAAATGCTCTCAACC-TTTCTGCATGAACTGCAAAGTTTTGTGGCATAA 443 Query 861 TAACTTGTCATGCGATGATTACAAGAGATTGGGTCCAAATCCTACAAAAAATGATATAAA 920 |||||||| ||||| ||||| | ||||| | || | || ||| | ||||||| | Sbjct 444 TAACTTGTTGTGCGACGATTATATGAGAT-G--TC-A--TCATACGGCAGATGATATGAT 497 Query 921 GCTAAAAGTTTTGGCAAATCAGCAAAA-GTGGAGTCAATGTGCAAAGTGCCAACACATGA 979 ||||||| | | |||||||| || | |||| ||||||||| ||| |||||||| |||| Sbjct 498 GCTAAAAAATCTAGCAAATCAT-AATATGTGGCGTCAATGTGTAAATTGCCAACAGATGA 556 Query 980 TTGCACGTATC-GAAGGATGCA 1000 | | |||| || |||||||||| Sbjct 557 TCGAACGT-TCAGAAGGATGCA 577 > Ahg897345 jgi|Araly1|897345|Al_scaffold_0005_1311 Length=651 Score = 294 bits (159), Expect = 7e-79 Identities = 498/654 (76%), Gaps = 53/654 (8%) Strand=Plus/Plus Query 283 ATGGGGAGATCCACGCCGGAGCAAGATAACATTGCCATGCTAATGAATGATGTGCAACGC 342 ||||||||||| ||| || | || || || ||| |||||||| |||||||||||||| Sbjct 1 ATGGGGAGATCTGTGCCTAAGGATGAGAAAATCGCCTTGCTAATGGATGATGTGCAACGC 60 Query 343 ATGAGACAACAATTGAGATATAGTAAT-CCTATTCTGGTGACTAGAGATCAAA-TTAGCT 400 || ||||||||||| | || ||| || |||||||| ||| ||||| |||||| | | | Sbjct 61 ATCAGACAACAATTTATATCTAG-CATCCCTATTCTTGTGGCTAGAAATCAAACTGA-TT 118 Query 401 TTGCT-TATAAGCTTGCAATGGAAACAGTAGTTTC-CG--AGATCAG--C-AT--AT-GT 450 ||| | |||| ||||||| ||||||| ||||||| || ||||| | || | || Sbjct 119 TTG-TCCATAAACTTGCAAAGGAAACAATAGTTTCTCGCCTCATCAGACCTATGCCTCGT 177 Query 451 A-TGC-C---TG-CGACTTGCAGCATCTG-TTTCAATAATGTTTTGGAAGCTGAGAAGAT 503 | ||| | | |||||| | | ||| ||| | ||||| | ||| ||||||||| Sbjct 178 ACTGCTCAGAAGAAGACTTGTGGTAACTGCTTT-GACGATGTTATCAAAGGTGAGAAGAT 236 Query 504 GTTTTCTGTTGCTATATGCGGTCATCAATTCTGTGTGGAGTGCGTGAAACATTATATAGA 563 |||||| |||||| ||||| ||||||||||||||||||| ||| ||||||| ||||||| Sbjct 237 GTTTTCCGTTGCTTTATGCCGTCATCAATTCTGTGTGGACTGCATGAAACAACATATAGA 296 Query 564 AGTGAAG-CTACTCGAGGGAGGTGTACCGAGATGTCTTGATTATCAATGCGA-GTCTAAG 621 |||| || ||| ||| ||||||||||| ||||||| | || || ||| | || || Sbjct 297 AGTG-AGTCTAAACGACGGAGGTGTACCAAGATGTCCTCATGATGGCTGC-ACATCAAAC 354 Query 622 CT-AACTCTTACA-AG-TTGTGGCAATCTTTTAACACCTAAACTAAAG-GCGATATGGAA 677 || || || || | || |||| | ||||||| |||||||||| |||| | ||| ||||| Sbjct 355 CTGAA-TC-TA-ATAGCTTGTACCCATCTTTTGACACCTAAAC-AAAGAGAGATGTGGAA 410 Query 678 GCAAAGGATCGAAGAGGAGTTGATT-CTTGTAGCGGAGAGAGTTT-ATTGTCCAAACCCG 735 ||||||||| ||||||||| ||| | |||| || ||| ||| |||| ||||| || Sbjct 411 ACAAAGGATCAAAGAGGAGTCAATTAC-TGTATATGACAGA-TTTCATTGCCCAAATCCA 468 Query 736 AGGTGCTCGGG-ATTAATGTCGAAAACCGAGCTC-TCTACATCAACTGAAGAAGATGTAA 793 || |||| ||| || |||||||||||||||||| | || ||| ||| || |||| | Sbjct 469 AGTTGCT-GGGCTTTGATGTCGAAAACCGAGCTCAT-TAAATCTACT---GACGATG-GA 522 Query 794 GTACTAGGACTTGTTG-TGTTAAATGC-GGTGAACCCTTTTGCATCAACTGCAAAGTTCC 851 || ||||| || | |||||||| || ||||||||||||| || ||||||||||| Sbjct 523 GT--TAGGAGACACTGCT-TTAAATGCTGG-AAACCCTTTTGCATTAATTGCAAAGTTCC 578 Query 852 GTGGCATAGTAACTTGTCATGCGATGATTACAAGAGATTGGGTCCAAATCCTAC 905 |||||||||||||||||| ||| | || ||||| |||| |||| ||| ||||| Sbjct 579 GTGGCATAGTAACTTGTCTTGCAAGGAATACAAAAGATCAGGTCAAAAGCCTAC 632 > Ahg323077 jgi|Araly1|323077|fgenesh1_pm.C_scaffold_5000621 Length=582 Score = 183 bits (99), Expect = 2e-45 Identities = 141/161 (88%), Gaps = 3/161 (2%) Strand=Plus/Plus Query 734 CGAGGTGCTCGGGATTAATGTCGAAAACCGAGCTCTCTACATCAACTGAAGAAGATGTAA 793 ||| |||||||| ||||||||| ||| |||||||||| ||| ||| |||||| || || Sbjct 311 CGATGTGCTCGGCTTTAATGTCGGTAACAGAGCTCTCTATATCTACTCAAGAAGCTG-AA 369 Query 794 GTACTAGGACTTGTTGTGTTAAATGCGGTGAACCCTTTTGCATCAACTGCAAAGTTCCGT 853 || ||||| |||||||| |||||| ||||||||||||||||||||||||||||||| | Sbjct 370 GT--TAGGAGATGTTGTGTCAAATGCAGTGAACCCTTTTGCATCAACTGCAAAGTTCCAT 427 Query 854 GGCATAGTAACTTGTCATGCGATGATTACAAGAGATTGGGT 894 |||||||| |||||||||||| ||||||||||||||||||| Sbjct 428 GGCATAGTGACTTGTCATGCGGTGATTACAAGAGATTGGGT 468 Score = 167 bits (90), Expect = 2e-40 Identities = 118/131 (90%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 543 GTGCGTGAAAC-ATTATATAGAAGTGAAGCTACTCGAGGGAGGTGTACCGAGATGTCTTG 601 ||||||||||| | ||||||||| || ||||||||||||| ||||||||||||||| || Sbjct 186 GTGCGTGAAACGA-CATATAGAAGCGAGGCTACTCGAGGGACGTGTACCGAGATGTCCTG 244 Query 602 ATTATCAATGCGAGTCTAAGCTAACTCTTACAAGTTGTGGC-AATCTTTTAACACCTAAA 660 |||||||||||||||||||||||||| ||| |||||||| | |||||||| ||||||||| Sbjct 245 ATTATCAATGCGAGTCTAAGCTAACTTTTAGAAGTTGTG-CTAATCTTTTGACACCTAAA 303 Query 661 CTAAAGGCGAT 671 ||||| ||||| Sbjct 304 CTAAAAGCGAT 314 > Ahg897338 jgi|Araly1|897338|Al_scaffold_0005_1304 Length=537 Score = 152 bits (82), Expect = 5e-36 Identities = 225/290 (78%), Gaps = 25/290 (9%) Strand=Plus/Plus Query 627 TCTTACAAGTTGTGGCAATCTTTTAACACCTAAACTA-AAGGCGATATGG-AAGCAAAGG 684 ||||| |||||||| | ||||||| ||||||||| || || ||| ||| || | |||| Sbjct 33 TCTTAGAAGTTGTGCCTATCTTTTGACACCTAAAGTACAA-AAGATGTGGCAA-CGAAGG 90 Query 685 ATCGAAGAGGAGTTGATTCTTGTA-GCGGAGAGAGTTT-ATTGTCCAAACCCGAGGTGCT 742 ||| || | || | ||||| | | | ||| ||| ||| |||| ||||| || || |||| Sbjct 91 ATCAAACAAGACTCGATTCCTCAATG-GGACAGA-TTTCATTGCCCAAAACCAAGTTGCT 148 Query 743 CGGGATT-AATGTCGAAAACCGAGCTCTCT-ACATC-AACTGAAGAAGATGTAAGTACTA 799 | || || ||||||||||| |||||| | | ||| | | |||||||| | ||| || Sbjct 149 C-GGCTTGGATGTCGAAAACTAAGCTCTTTGA-ATCTATC-GAAGAAGA-GGGAGT--TA 202 Query 800 GGACTTGTTG-TGTTAAATG-CGGTGA-ACCCTTTTGCATCAACTGCAAAGTTCCGTGGC 856 ||| ||||| | ||||||| | || | ||||||||||||||| |||||||||||||||| Sbjct 203 GGAGATGTTGCT-TTAAATGTC-GT-ACACCCTTTTGCATCAATTGCAAAGTTCCGTGGC 259 Query 857 ATAGTAACTTGTCATGCGATGATTACAAGAGATTGGGT-CCAAATCCTAC 905 ||||||||||||| ||||| || |||| || ||| | | ||||| ||||| Sbjct 260 ATAGTAACTTGTCGTGCGACGAATACAGGA-ATTCGCTTCCAAAGCCTAC 308 > Ahg937218 jgi|Araly1|937218|scaffold_501409.1 Length=633 Score = 147 bits (79), Expect = 2e-34 Identities = 132/156 (85%), Gaps = 9/156 (6%) Strand=Plus/Plus Query 849 TCCGTGGCATAGTAACTTGTCATGCGATGATTACAAGAGATTGGGTCCAAATCCTACAAA 908 ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || Sbjct 355 TCCGTGGCATAGTGACTTGTCGTGCGACGATTACAAGAGATTGGGTCCAAATCCTACTAA 414 Query 909 A-A--ATGATATAAAGCTAAAAGTTTTGGCAAATCAGCAAA-A-GTGGAGTCAATGTGCA 963 | ||||||||||| | |||| ||| |||||| || ||| | |||| ||||||||| | Sbjct 415 TGATGATGATATAAAGTTCAAAGCTTTAGCAAAT-AG-AAATATGTGGCGTCAATGTGGA 472 Query 964 AAGTGCCAACACATGATTGCACGTATC-GAAGGATG 998 |||||| || ||||||| | |||| || |||||||| Sbjct 473 AAGTGCAAAAACATGATCGAACGT-TCAGAAGGATG 507 > Ahg897469 jgi|Araly1|897469|Al_scaffold_0005_1435 Length=411 Score = 110 bits (59), Expect = 3e-23 Identities = 73/80 (91%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 840 CTGCAAAGTTCCGTGGCATAGTAACTTGTCATGCGATGATTACAAGAGATTGGGTCCAAA 899 |||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 332 CTGCAAAGTTGCGTGGCATAGTAACTTGTCTTGCGACGATTACAAGAGATTGGGTCCAAA 391 Query 900 TCCTACAAAAAATGATATAA 919 ||||| | || ||| ||||| Sbjct 392 TCCTAGAGAAGATGTTATAA 411 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 38732883672 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5