BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G44540.1 Length=1725 Score E Sequences producing significant alignments: (Bits) Value Ahg484866 jgi|Araly1|484866|fgenesh2_kg.5__858__AT3G44540.1 2215 0.0 Ahg941755 jgi|Araly1|941755|scaffold_602299.1 837 0.0 Ahg484868 jgi|Araly1|484868|fgenesh2_kg.5__860__AT3G44560.1 545 3e-154 > Ahg484866 jgi|Araly1|484866|fgenesh2_kg.5__858__AT3G44540.1 Length=1490 Score = 2215 bits (1199), Expect = 0.0 Identities = 1397/1494 (94%), Gaps = 8/1494 (1%) Strand=Plus/Plus Query 59 ATGGACTCCAATTGCATTCAGTTCCTCCATG-ACAAGACGATTCTCGTCACCGGTGTTCC 117 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct 1 ATGGAGTCCAATTGCATTCAGTTCCTCCA-GAACAAGACGATTCTCGTCACCGGTGTTCC 59 Query 118 CGGTTTCCTCGCCAAAGTGTTTGTGGAGAAAATATTGAGGATTCAACCAAAGGTAAAGAA 177 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct 60 CGGTTTCCTCGCCAAAGTGTTTGTGGAGAAAATATTGAGGATTCAACCAAACGTGAAGAA 119 Query 178 GCTTTTCCTTCTT-TTGAGAGCAGCAGACAATGAATCAGCCATGCAACGGTTTCACAGTG 236 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 GCTTTTCCTT-TTCTTGAGAGCAGCAGACAATGAATCAGCCATGCAACGGTTTCACAGTG 178 Query 237 AGGTTTTGGAGAAAGATCTTTTTAGAGTGTTGAAAAACGCTTTAGGTGATGAGAATCTGA 296 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 179 AGGTTTTGGAGAAAGATCTTTTTAGAGTGTTGAGGAACGCTTTAGGTGATGAGAATCTGG 238 Query 297 AAGCTTTCA-TAACAGAAAAAGTCGTACCTATTCCCGGTGATATATCCGTTGATAATTTG 355 ||||||| | || ||||||||||||| |||||| | |||||||| || ||||||||| || Sbjct 239 AAGCTTT-AGTATCAGAAAAAGTCGTCCCTATTGCGGGTGATATTTCAGTTGATAATCTG 297 Query 356 GGAGTGAAGGGTTCTGATCTCTTACAACATATGTGGAATGAGATTGATATCATTGTCAAT 415 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 298 GGAGTGAAGGATTCTGATCTCTTACAACATATGTGGAATGAGATCGATATCATTGTCAAT 357 Query 416 GTAGCCGCCACAACGAACTTTGATGAAAGATATGATGTTGGTCTTAGCGTCAACACATTT 475 || ||||||||||| ||||||||||||||||||||||| ||||||||| |||| |||||| Sbjct 358 GTCGCCGCCACAACTAACTTTGATGAAAGATATGATGTCGGTCTTAGCATCAATACATTT 417 Query 476 GGACCGCTCAATGTCCTCAACTTTGCCAAGAAGTGTGTTAAAGGACAGTTGCTTCTTCAT 535 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 418 GGACCGCTCAATGTCCTCAACTTTGCCAAGAAGTGTGTTAAAGGACAGTTGGTTCTCCAT 477 Query 536 GTTTCAACCGCGTATGTGCGCGGAGAGAAGTCTGGACTTTTACATGAGAAAACATTTCAC 595 || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 478 GTCTCAACCGCGTATGTGTGCGGAGAGAAGTCTGGACTTTTACAAGAGAAAACATTTCAC 537 Query 596 ATGGGGGAGACATTGAACGGACATAGAAAATTAGTCATTGAGACCGAAATGGAGCTAATG 655 ||||| || || |||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 538 ATGGGAGAAACGTTGAACGGACATGGAAAATTAGTCATTGAGACCGAGGTGGAGCTAATG 597 Query 656 AAACAAAAACTGAAAGAGCTACAGAAACAAAATTGTTCAGAAGAAGAGATTTCACAGTCT 715 ||||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| Sbjct 598 AAACAAAAACTGAAAGAACTACAGAAACAAGATTGTTCGGAAGAAGAGATTTCACAGTCT 657 Query 716 ATGAAAGATCTTGGAATGTCAAGGGCAAAGCTTCATGGATGGCCAAACACATATGTGTTT 775 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 658 ATGAAAGATCTTGGAATGTCAAGGGCAAAGCTTCATGGATGGCCAAACACATATGTCTTT 717 Query 776 ACCAAATCAATGGGAGAGATGCTTCTTGGTAATTATAGAGAAAACCTTCCCATCGTTATC 835 ||||||||||||||||||||||||||||||||| |||||||||| ||||| || |||||| Sbjct 718 ACCAAATCAATGGGAGAGATGCTTCTTGGTAATCATAGAGAAAATCTTCCTATTGTTATC 777 Query 836 ATCCGTCCCACAATGATCACTAGCACTTTTTCAGAACCATTTCCCGGTTGGATCGAAGGG 895 ||||| ||||||||||| ||||| ||| || | ||||||||||||||||||||||||||| Sbjct 778 ATCCGCCCCACAATGATTACTAGTACTCTTGCCGAACCATTTCCCGGTTGGATCGAAGGG 837 Query 896 TTAAGAACCATAGACAGTGTGATTGTTGCATATGGCAAAGGAAGGCTTAAATGTTTTCTT 955 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 TTAAGAACCATAGATAGTGTGATTGTTGCATATGGCAAAGGAAGGCTTAAATGTTTTCTT 897 Query 956 GCAGATCCAAACTCAGTCCTTGATCTTATACCTGTGGACATGGTCGCAAACGCAATGGTC 1015 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 898 GCAGATCCAAACTCAGTCCTTGATCTTATACCTGTGGATATGGTCGCAAACGCAATGGTC 957 Query 1016 ACGGCTGCGGCAATACACGCAGGGAAGCTAGGTTCCCAGACCGTGTACCATGTCGGATCA 1075 ||||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||| Sbjct 958 ACGGCTGTGGCAATACACGCAGGGAAGTTAGGCTCTCAGACCGTGTACCATGTCGGATCA 1017 Query 1076 TCTTGTAAAAACCCGATCACATTCGAACAGATTCATGATCTCGCGGCTAGCTACTTCACG 1135 |||||||| |||||||| ||||||||||||||||| |||||||| ||| |||||||||| Sbjct 1018 TCTTGTAAGAACCCGATAACATTCGAACAGATTCACGATCTCGCAGCTCGCTACTTCACC 1077 Query 1136 AAAAACCCTCTTGTTAGACGCGATGGTTCATCTAT-ACTAGTCTCCAAAGGAACTATCTT 1194 ||||| ||||||||| |||| ||||||||||| || | ||||||| |||||||||||||| Sbjct 1078 AAAAATCCTCTTGTTGGACGTGATGGTTCATCCATCA-TAGTCTCGAAAGGAACTATCTT 1136 Query 1195 GTCCACAATGGCTCAGTTCAGTTTCTACATGACCCTTCGTTACAAGCTACCTTTGCAGAT 1254 |||||| |||||||||||||| ||||||||||||||||||||||| ||||||| ||||| Sbjct 1137 GTCCACTATGGCTCAGTTCAGCCTCTACATGACCCTTCGTTACAAGTTACCTTTACAGAT 1196 Query 1255 GTTGCGATTGATATATGTAATTTATCCTTGGTGGAATGGTAATAAATATAAAGACATTGA 1314 |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 1197 ACTGCGATTGATATATGTAATTTATCCTTGGTGGGATGGAAATAAATATAAAGACATTGA 1256 Query 1315 CCGCAAGATTAAGCTGGCGATGCGGTTGGTCGACCTCTACAGACCTTATGTCTTGTTTAA 1374 |||||| ||||| ||||||||| || | ||||||||||||||||| |||||||||||||| Sbjct 1257 CCGCAAAATTAAACTGGCGATGAGGCTAGTCGACCTCTACAGACCGTATGTCTTGTTTAA 1316 Query 1375 GGGCATATTTGACGATACGAATACTGAGAAACTGCGGTTGAAAAGAAAGGAGATTAATAA 1434 |||| ||||||| |||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct 1317 GGGCCTATTTGATGATACGAATACTGAGATACTACGGTTGAAAAGAAAGGAGATTAATAA 1376 Query 1435 AGAAATGTATGGTTTGTTTGAATTTGATCCAAAGTCTATTGATTGGGAGGATTATATGAC 1494 |||| |||||| ||| || || |||||||||||||||||||||||||| ||||| ||||| Sbjct 1377 AGAACTGTATGATTTATTCGACTTTGATCCAAAGTCTATTGATTGGGACGATTACATGAC 1436 Query 1495 GACCATTCATATTCCCGGCCTCATCACCTATGTACTCAAAAAATAAAACGTTAA 1548 |||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1437 GACCATTCATATTCCCGGCCTCATCACCTATGTACTCAAATAATAAAACGTTAA 1490 > Ahg941755 jgi|Araly1|941755|scaffold_602299.1 Length=1522 Score = 837 bits (453), Expect = 0.0 Identities = 1196/1546 (77%), Gaps = 85/1546 (5%) Strand=Plus/Plus Query 36 TTGGAT-AGATATAAGTTT-CTTCAATGGACTCCAATTGCATTCAGTTCCTCCATGACAA 93 |||| | ||| |||| ||| ||||||||| |||||||| |||| || ||| | |||| Sbjct 1 TTGGTTGAGA-ATAATTTTGTTTCAATGGAATCCAATTGTGTTCAATTTCTCGGTAACAA 59 Query 94 GACGATTCTCGTCACCGGTGTTCCCGGTTTCCTCGCCAAAGTGTTT-GTGGAGAAAATAT 152 ||| |||||| |||| || | || ||||| || ||||| || ||| || |||||||| | Sbjct 60 GACCATTCTCATCACTGGGGCACCTGGTTTTCTTGCCAAGGT-TTTGGTAGAGAAAAT-T 117 Query 153 -TGAGGATT-CAACCAAAGGTAAAGAAGCTTTTCCTTCTTTTGAGAGCAGCAGAC-AATG 209 | ||| || |||||||| || |||||| | | |||||| |||||||| | ||| || Sbjct 118 CTAAGG-TTGCAACCAAATGTGAAGAAGATGTACCTTCTGTTGAGAGCTCCCGACGAA-A 175 Query 210 AATCAGCCATGCAACGGTT-TCACAGTGAGGTTTTGGAGAAAGATCTTTTTAGAGTGTTG 268 |||||||||||||||| || | | | ||||||| | |||| ||| || |||| ||||||| Sbjct 176 AATCAGCCATGCAACGCTTAT-ATACTGAGGTTATAGAGATAGACCTCTTTAAAGTGTTG 234 Query 269 AAAAACGCTTTAGGTGATGAGAATC-TGAAAGCTTTCATAACAG-AAAAAGTCGTACCTA 326 | |||| | ||||||| ||||| | |||| || || | | | ||||| | ||||| Sbjct 235 AGGAACGATCTAGGTGAAGAGAA-CTTGAATGCCTTGGT-GCGGAAAAAAATTGTACCGG 292 Query 327 TTCCCGGTGATATATCCG-TTGATAATTTGGGAGTGAAGGGTTCTGATCTCTTACAACAT 385 |||| |||||||||| || | |||||||||||| |||| | | |||||| |||||| | Sbjct 293 TTCCAGGTGATATAT-CGATCGATAATTTGGGACTGAAAGACACCGATCTCATACAACGT 351 Query 386 ATGTGGAATGAGATTGATATCATTGTCAATGTAGCCGCCACAACGAACTTT-GATGAAAG 444 |||||| ||||||||||||||| |||| | || ||||| || || ||| |||||||| Sbjct 352 TTGTGGAGTGAGATTGATATCATAATCAACATTGCTGCCACGAC-AAATTTCGATGAAAG 410 Query 445 ATATGATGTTGGTCTTAGCG-TCAACACATTTGGA-CCGCTCAATGTCCTCAACTTTGCC 502 ||||||| |||||||| | | |||| ||||||||| || || ||||| |||||||| ||| Sbjct 411 ATATGATATTGGTCTT-GGGATCAATACATTTGGAGCC-CTTAATGTTCTCAACTTCGCC 468 Query 503 AAGAAGTGTGTTAAAGGACAGTTGCTTCTTCATGTTTCAACCGCGTATGTGCGCGGAG-A 561 || ||||| ||||||||||| |||||||| ||||| || ||||||||||| |||||| | Sbjct 469 AAAAAGTGCGTTAAAGGACAATTGCTTCTCCATGTCTCGACCGCGTATGTAAGCGGAGAA 528 Query 562 GAAGTCTGGACTT-TTACAT-GAGAAAACATTTC-ACATGGGGGAGACAT-TGAACGGAC 617 || || || || |||| | |||||| || ||| | ||||||||||| | | | || | Sbjct 529 CAA-TCCGG-GTTATTAC-TAGAGAAACCA-TTCAAGATGGGGGAGAC-TCTCAGCGAAA 583 Query 618 ATAGAAAATTAGTCATTGAGACCGAAATG-GAGCTAATGAAACAAAAACTGAAAGAGCTA 676 | | ||| ||| ||| | | | || | || ||||||||||| ||| |||||||||| Sbjct 584 AGCGGAAACTAGACATCAATATAG-AACGTGAACTAATGAAACAGAAATTGAAAGAGCT- 641 Query 677 CAGAAACAAAATTGTTCAGAAGAAGAGATTTCACAGTCTATGAAAGATCTTGGAATGTCA 736 ||| ||||||| ||||||||||| ||||| | ||||||||| |||||||| || Sbjct 642 -----TCAAGATTGTTCTGAAGAAGAGATCTCACAAACAATGAAAGATTTTGGAATGGCA 696 Query 737 AGGGCAAAGCTTCATGGATGGCCAAACACATATGTGTTTACCAAATCAATGGGAGAGATG 796 |||||||||||||||||||||||||| |||||||| || |||||| |||||||||||||| Sbjct 697 AGGGCAAAGCTTCATGGATGGCCAAATACATATGTATTCACCAAAGCAATGGGAGAGATG 756 Query 797 CTTCTTGGTAATTATAGAGAAAACCTTCCCA-TCGTTATCATCCGTCCCACAATGATCAC 855 || | || || ||||||||||| || ||| | |||||||| ||||| |||||||| || Sbjct 757 CTAATGGGAAAATATAGAGAAAAT-TTGCCACTTGTTATCATACGTCCAACAATGATTAC 815 Query 856 TAGCACTTTTTCAGAACCATTTCCCGGTTGGATCGAAGGGTT-AAGAACCAT-AGACAGT 913 ||| ||| || | |||||||| ||||||||||| |||||||| || ||| || ||| ||| Sbjct 816 TAGTACTCTTGCCGAACCATTCCCCGGTTGGATTGAAGGGTTGAA-AAC-ATTAGATAGT 873 Query 914 GTGATTGTTGCATATGGCAAAGGAAGGCTTAAATGTTTTCTTGCAGATCCAAACTCAGTC 973 ||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||| Sbjct 874 GTGATTGTTGCATATGGTAAAGGAAGGCTTAAATGTTTTCTTGCGGATTCAAACTCAGTT 933 Query 974 CTTGATCTTATACCTGTGGACATGGTCGCAAACGCAATGGTCACGGCTGCGGCAATACAC 1033 |||| |||||||| | |||||||| | ||| || ||| | | || || ||| | | Sbjct 934 TTTGACCTTATACCGGCAGACATGGTGGTAAATGCGATGATTGCAGC--CG-CAACAG-C 989 Query 1034 GCA--GGGAAGCTA--GG--TTCCCAGACCGTGTACCATGTCGGATCATCTTGTAAAAAC 1087 || ||| || || || ||| || | | || |||||||| || |||||||| || Sbjct 990 TCATTGGGGAGATACCGGGATTC--AGGCAATATATCATGTCGGTTCTTCTTGTAAGAAT 1047 Query 1088 CCGATCACATTCGAACAGA-TTCATGATCTCGCGGCTAGCTACTTCACGAAAAACCCTCT 1146 ||| |||| || | ||| | |||| ||| || ||||| | ||||| | ||| ||||| Sbjct 1048 CCGGTCACGTTTGGACA-ACTTCACGATATCACGGCTCGTTACTTTGCTAAACGTCCTCT 1106 Query 1147 TGTTAGACGCGA-TGGTTCATCTAT-ACTAGTCTCCAAAGGAACTATCTTGTCCACAATG 1204 ||| | || || ||| || | || | |||| |||||||||| || |||||||| ||| Sbjct 1107 GGTTGGTCG-GAATGGCTCGCCAATCA-TAGTGACCAAAGGAACCATTTTGTCCACTATG 1164 Query 1205 GCTCAGTTCAGTTTCTACATGACCCTTCGTTACAAGCTACCTTTGCAGATG-TTGCGATT 1263 ||||| ||||| ||||||||||||||||||||||||| ||||| ||||| || ||||| Sbjct 1165 GCTCAATTCAGCCTCTACATGACCCTTCGTTACAAGCTTCCTTTACAGATACTT-CGATT 1223 Query 1264 GATATATGTAATTTATCCTTGGTGGAATGGTA-ATAAATATAAAGACATT-GACCGCAAG 1321 |||| || || ||||||| ||| | | || | |||| || || ||| | | ||| || Sbjct 1224 GATAAATATAGTTTATCCATGGAGTCACGG-AGATAACTACAATGACCTCAG-CCGAAAA 1281 Query 1322 ATTAAGCTGGCGATGCGGTTGGTCGACCTCTAC-AGACCTTA-TGT-CTTGTTTAAGGGC 1378 || ||||| || ||||| | || || || ||| || ||||| | | || || ||||| Sbjct 1282 ATCAAGCTAGCTATGCGACTAGTTGAGCTTTACCAG-CCTTACT-TACTC-TTCCAGGGC 1338 Query 1379 ATATTTGACGATACGAATACTGAGAA-ACTGCGGTTGAAAAGAAAGGAGATTAAT-AAAG 1436 |||||||| ||| ||||| || || |||||| ||||||||||||||| || | |||| Sbjct 1339 ATATTTGATGATTTAAATACGGA-AAGACTGCGAATGAAAAGAAAGGAGAATA-TCAAAG 1396 Query 1437 AAAT-GTATGGTTTGTTTGAATTTGATCCAAAGTCTATTGATTGGGAGGATTATATGACG 1495 | | | |||| | ||| || || ||||| ||||| ||||||||||| ||||||| || Sbjct 1397 AGTTAG-ATGGATCGTTCGAGTTCGATCCCAAGTCCATTGATTGGGACAATTATATCACA 1455 Query 1496 ACCATTCATATTCCCGGCCTCATCACCTATGTACTCAAAAAATAAA 1541 | || || ||||| ||||||||||||||||| || ||| |||||| Sbjct 1456 AACACACACATTCCTGGCCTCATCACCTATGTGCTTAAACAATAAA 1501 > Ahg484868 jgi|Araly1|484868|fgenesh2_kg.5__860__AT3G44560.1 Length=1501 Score = 545 bits (295), Expect = 3e-154 Identities = 826/1075 (77%), Gaps = 65/1075 (6%) Strand=Plus/Plus Query 57 CAATGGACTCCAATTGCATTCAGTTCCTCCATGACAAGACGATTCTCGTCACCGGTGTTC 116 ||||||| | |||||| |||| || || || ||||||||||||| ||||| || | Sbjct 42 CAATGGAATTCAATTGTGTTCATTTTCTTCAAAACAAGACGATTCTTGTCACAGGAGCAA 101 Query 117 CCGGTTTCCTCGCCAAAGTGTTTGTGGAGAAAATATTGAGGA-TTCAACCAAAGGTAAAG 175 |||||||||| ||||| || |||||||||||||| |||| || | |||||||| || || Sbjct 102 CCGGTTTCCTTGCCAAGGTTTTTGTGGAGAAAATTTTGA-GAGTACAACCAAATGTGAAT 160 Query 176 AAGCTTTTCCTTC-TTTTGAGAGCAGCAGACAATGAATCAGCCATGCAACGGTTTCACAG 234 ||||| | || || | |||||||| | |||| ||| | || | | |||| || | || Sbjct 161 AAGCTGTACC-TCGTGGTGAGAGCATCCGACACTGACGCCGCGACGAAACGCTTACGCAC 219 Query 235 TGAGGTTTTGGAGAAAGATCTTTTT-AGAGTGTTGAA---AAACGCT-TTAGGTGATGAG 289 |||| || ||||||||||||||| || ||||| || | | | | || || ||||| Sbjct 220 AGAGGCCTTCGAGAAAGATCTTTTTAAG-GTGTT-AAGGGAGA-G-TCTT-GGCGATGAA 274 Query 290 AATCTGAA-AGCTTTCATAACAGAAAAAGTCGTACCTATTC-CCGGTGATATATCCG-TT 346 ||| | || | | || | | |||||||| || || || | |||||||| | || | Sbjct 275 AATTTCAATA-CATTGTTGTCCGAAAAAGTTGT-CCCGGTCGCAGGTGATAT-TGCGATG 331 Query 347 GATAATTT-GGGAGTGAAGGGTTCTGATCTCTTACAACATATGTGGAATGAGATTGATAT 405 ||| |||| || | |||||| ||| | ||| | ||| |||| || || || ||||| Sbjct 332 GATCATTTAGGCA-TGAAGGACTCTAAACTCAGAGAACGTATGCAAAAAGAAATCGATAT 390 Query 406 CATTGTCAATGTAGCCGCCACAACGAACTTTGATGAAAGATATGATGTTGGTCTTAGCGT 465 |||| ||||| || |||||||| || ||||| || |||||||||||||||||| | | Sbjct 391 TGTTGTTAATGTGGCAGCCACAACTAATTTTGACGAGAGATATGATGTTGGTCTTGGAAT 450 Query 466 CAACACATTTGGACCGCTCAATGTCCTCAACTTTGCCAAGAAGTGTGTTAAAGGACAGTT 525 |||||||||||| | ||||||||||| ||||||||||| || |||||||||| || || Sbjct 451 TAACACATTTGGAGCTCTCAATGTCCTTAACTTTGCCAAAAAATGTGTTAAAGCTCAATT 510 Query 526 GCTTCTTCATGTTTCAACCGCGTATGTGCGCGGAGAGAAGTCTGGACTTTTACATGAGAA 585 |||||| ||||||||||| || ||||| | ||||||||| | || || ||| ||| || Sbjct 511 GCTTCTCCATGTTTCAACTGCTTATGTTTGTGGAGAGAAGCCAGGTCTCCTACCTGA-AA 569 Query 586 AA-CATTTCACATGGGGGAGACATT-G-AACG-G-A-CATAGAAAATTAGTCAT-TGAGA 638 || ||||| ||| || ||| ||| | |||| | | || |||| | || | | | Sbjct 570 AACCATTTGTCAT--GGAAGAGATTCGTAACGAGAATGATTTTCAATT-G-GATAT-ACA 624 Query 639 CC--GAAATGGAGCTAATGAAACAAAAACTGAAAGAGCTAC-A-GAAACAAAATTGTTCA 694 || |||| |||||| ||||| |||| | ||||||| || | | | ||||| |||||||| Sbjct 625 CCGTGAAAGGGAGCTGATGAAGCAAAGATTGAAAGAACT-CAATG-AACAAGATTGTTCA 682 Query 695 GAAGAAGAGATT--TCACAGTCTATGAAAGATCTTGGAATGTCAAGGGCAAAGCTTCATG 752 |||||||| ||| || | | | |||||||| || || ||| ||||||||||||||||| Sbjct 683 GAAGAAGACATTACTCGC-G-CCATGAAAGAACTCGGCATGGAAAGGGCAAAGCTTCATG 740 Query 753 GATGGCCAAACACATATGTGTTT-ACCAAATCAATGGGAGAGATGCTTCTTGGTAATTAT 811 ||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| || Sbjct 741 GATGGCCAAACACATATGT-TTTCACCAAATCGATGGGAGAGATGCTTCTTGGTAACTAC 799 Query 812 AGAGAAAACCTTCC-CATCGTTATCATCCGTCCCACAATGATCACTAGCACTTTTTCAGA 870 | |||||| ||||| | |||| || ||||| ||||| ||||||||||||||| ||||||| Sbjct 800 AAAGAAAATCTTCCTC-TCGTCATTATCCGCCCCACGATGATCACTAGCACTCTTTCAGA 858 Query 871 ACCATTTCCCGGTTGGATCGAAGGGTTAAGAACCATAGACAGTGTGATTGTTGCATATGG 930 ||||||||| |||||||||||||| |||||||| |||||||||||||| |||| || || Sbjct 859 ACCATTTCCTGGTTGGATCGAAGGATTAAGAACTGTAGACAGTGTGATTATTGCTTACGG 918 Query 931 CAAAGGAAG-GCTTAAATGTTTTCTTG-CAGATCCAAACTCAGTCCTTG--ATCTTATAC 986 ||||| || ||| || |||||||||| | ||| |||||| || ||| || | |||| Sbjct 919 -AAAGGGAGTGCTCAAGTGTTTTCTTGTC-GATGTAAACTCGGT--TTGCGATATGATAC 974 Query 987 CTGTGGACATGGTCGCAAACGCAATGGTCACGGCTGCGGCAATACACGCAGGGAAGCT-A 1045 | | ||| ||||| |||||||| ||| |||||||||| || | ||| || || | | | | Sbjct 975 CAGCGGATATGGTGGCAAACGCGATGATCACGGCTGCAGCCACACATGCTGG-AGGTTCA 1033 Query 1046 --GGTTCCCA-GACCGTGTACCATGTCGGATCATCTTGTAAAAACCCGATCACAT 1097 ||||| || | |||||||| || || |||||| | ||||||| || |||| Sbjct 1034 AAGGTTCACATG---GTGTACCAAGTTGGTTCATCTCGCCAAAACCCAATAACAT 1085 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64715326255 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5