BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G44800.1
Length=1695
Score E
Sequences producing significant alignments: (Bits) Value
Ahg897254 jgi|Araly1|897254|Al_scaffold_0005_1220 1205 0.0
Ahg937123 jgi|Araly1|937123|scaffold_501314.1 935 0.0
Ahg897256 jgi|Araly1|897256|Al_scaffold_0005_1222 776 0.0
Ahg930958 jgi|Araly1|930958|scaffold_303415.1 719 0.0
Ahg937127 jgi|Araly1|937127|scaffold_501318.1 427 1e-118
Ahg938811 jgi|Araly1|938811|scaffold_503002.1 272 6e-72
Ahg924373 jgi|Araly1|924373|scaffold_105654.1 244 1e-63
Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854 206 6e-52
Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754 119 8e-26
Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994 108 2e-22
Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598 99.0 1e-19
Ahg480146 jgi|Araly1|480146|fgenesh2_kg.3__2847__AT2G05420.1 67.6 3e-10
Ahg336568 jgi|Araly1|336568|fgenesh1_pg.C_scaffold_1003133 65.8 1e-09
> Ahg897254 jgi|Araly1|897254|Al_scaffold_0005_1220
Length=1629
Score = 1205 bits (652), Expect = 0.0
Identities = 1093/1296 (84%), Gaps = 69/1296 (5%)
Strand=Plus/Plus
Query 1 ATGGGGTATGAGAAATTCACTTGGGTGATTAAGAATTTCTCATCTTTGCAATCTGAGTAC 60
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1 ATGGGGAATGAGAAATTCACTTGGGTGATTAAGAATTTCTGTTCTTTGCAATCTGAGTCC 60
Query 61 ATTAAATCTGATATATTCGTGATCGGTGGCTGCAAATGGTGTCTTTTGGCCTATCCCAAT 120
||||| |||||| ||||||||||||||||||||||||||| |||| ||| ||||||||
Sbjct 61 ATTAATTCTGATGTATTCGTGATCGGTGGCTGCAAATGGTATCTTGCGGCTTATCCCAAA 120
Query 121 GGAAAACAGAATGCTAG-TTATTTGTCTCTGTATCTGGATGGT-CCT-ACTTTAAAAACT 177
|||||| | || ||| | |||||||| ||| | ||||| |||| || | ||| ||||||
Sbjct 121 GGAAAATATAAGGCT-GATTATTTGTTTCTATTTCTGG-TGGTAGCTGA-TTTTAAAACT 177
Query 178 TTGCCTTGTGGATGTAGAAGGCGCATAAGATTTCGCCTAACTGTT-GTAAATCAACTCTC 236
||||| | |||||| | ||| | |||||||| |||||||||| || ||||||||| ||||
Sbjct 178 TTGCCATATGGATGGAAAAGACACATAAGATATCGCCTAACT-TTCGTAAATCAAATCTC 236
Query 237 CGA-AAACCTCTCCCGACGAGGA-G-AAGGAAAACGATGGTTTGATAAAAAGCTTCCTCT 293
| | | ||||||| || |||| | || ||| | |||| | | |||| | | ||||||
Sbjct 237 CTATGGA-CTCTCCCTACTAGGAGGAAAAGAAGA--ATGGATAGGTAAATACCGTCCTCT 293
Query 294 GTGTGGGTATGAAGAAGTGCTTCTTCTTACCAAACTTAATGCCAAACATGGTGGATTTCT 353
|| |||||| || || || ||||||||||||||||||||| |||| | |||||||||||
Sbjct 294 CTGCGGGTATCAAAAAATGATTCTTCTTACCAAACTTAATGACAAAAAGGGTGGATTTCT 353
Query 354 TGTGAACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATT 413
|||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||
Sbjct 354 TGTGAACAATGAAGTCAAGATTGTTGTGGAGGTAGATGTTCTTCAAGTGATTGGCAAATT 413
Query 414 AGATGTTTCTAAGGAATCTCAAGAGGTAATTAAACCTCGGAAAAGGATGAGGCTATATGG 473
|||||||||| |||||||||||||||||| | |||||| ||||||||| | |||| ||||
Sbjct 414 AGATGTTTCTGAGGAATCTCAAGAGGTAACTCAACCTCTGAAAAGGATAAAGCTAAATGG 473
Query 474 TGATGGTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTTCATCAGTAGATGTCAATGG 533
||| |||| ||| | | ||||||||||||||||||||||||
Sbjct 474 TGA---TGGT---GTG----G-----T---------AACTTCATCAGTAGATGTCAATGG 509
Query 534 GTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTCGAAAGACACCCATA 593
|||||||||||||||||| |||||||||||||||| || |||||||||| ||||||| |
Sbjct 510 CTTTCAAGTTCTTCCTTCAGAGGCGGAATCTGTGAAACGCATATTCGAAAAACACCCAGA 569
Query 594 CATGGCATTAGAGTTCCGAGCAAAGAACCAACAGT-TGAGGGCATCATGTATAAATGTCC 652
|||||| || ||||||| |||||||||||||| | ||||| ||||||| |||||||||
Sbjct 570 AATGGCACTAAAGTTCCGGGCAAAGAACCAACA-TCTGAGGACATCATGCATAAATGTCG 628
Query 653 TCCTCAGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCATTGATGACCTAG 712
|||||| ||||||||| |||||||| || ||||||||||| ||||||||||||||| | |
Sbjct 629 TCCTCAACCTAATCAAAACGTTGTGTCAATCACTGCAAGACATTTCCATTGATGACATGG 688
Query 713 GCCAAACAGAGCAAGTACTAACAT-TCCTGCAA-AATTCTGGATTTAAGGTGGATTGGCT 770
| ||| ||||||||| |||||||| | ||| || ||||| || ||||||||||||||| |
Sbjct 689 GACAAGCAGAGCAAGCACTAACATAT-CTG-AATAATTCGGGCTTTAAGGTGGATTGGTT 746
Query 771 GGAGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCG 830
|||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||
Sbjct 747 GGAGGGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCTGTTTGGTAAGACTCG 806
Query 831 GATGCAAGGATTAGAGGAAGACCTGAAGGTCTTCAAGAAGAA-GTGCTCTGACATAGAAG 889
|||||||| |||||||||||| || |||||||| || ||||| |||||||||||||||||
Sbjct 807 GATGCAAGAATTAGAGGAAGAACTCAAGGTCTTTAA-AAGAAAGTGCTCTGACATAGAAG 865
Query 890 CTCTACTGGAGAAAGAGAAGGAAGAACTCAAGGGA-TTGAAGCAAAAGTGCTCAGACATA 948
|| |||||||||||||||| ||||||||||||| | ||||||||||| ||||| |||| |
Sbjct 866 CTATACTGGAGAAAGAGAAAGAAGAACTCAAGG-ACTTGAAGCAAAAATGCTCGGACACA 924
Query 949 GAAGCTCTGCTGGAGAAAGAGAAGGGAAAGGTGTTGGCTGCTGCT-GCCAGAACTCC-T- 1005
|||||||| || |||||||||||| |||||||||||| || || | || ||| | |
Sbjct 925 GAAGCTCTACTTGAGAAAGAGAAGACAAAGGTGTTGGCCGCCGCCAGACA-AACACAGTG 983
Query 1006 CTAACGTTAGATCGCATGAATATTCTC-ATTGGGTATCGAGAAATGATTTCCCTTACCAA 1064
|| ||||||||||| ||| ||||| | || |||| |||||||||||||||||||||
Sbjct 984 CTG--GTTAGATCGCAAAAATTTTCTCCAC-GGATATCAAGAAATGATTTCCCTTACCAA 1040
Query 1065 ACTTAATGCCAA-GAAAGGTGGATTTCTTGTGAACAATAAAGTCAAGATTGTTGTGGAGG 1123
|||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 1041 ACTTAATGCCAAAGAA-GGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTTGCGGAGG 1099
Query 1124 TAGACGTTCTTCAAGTTGTTGGCGGATT-AGATGTTT---------CTCAAGAGGTGACT 1173
| | |||||||||||| ||||| ||| |||||||| ||||||| || |||
Sbjct 1100 TTTATGTTCTTCAAGTTATTGGCA-ATTTAGATGTTTTAGAGGGATCTCAAGACGTAACT 1158
Query 1174 CAACCTCTGAAAAGGATAAGGCTAAACGATGATGGTGCAGCATCTACTCATTTGCAAACC 1233
||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||
Sbjct 1159 AAACCTCTGAAAAGGATAAGGCTAAATGATGATGGTGCAGCGTCTAGTCATTTGCAAACC 1218
Query 1234 ATTGATGTCAATGGGTTTCTAGTTCTTGCTTCACAG 1269
|| |||||||||||||||| ||||||| ||||||||
Sbjct 1219 ATGGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
Score = 496 bits (268), Expect = 3e-139
Identities = 462/552 (84%), Gaps = 28/552 (5%)
Strand=Plus/Plus
Query 1036 GGGTATCGAGAAATGATTTC-CCTTACCAAACTTAATGCCAAGAAA-GGTGGATTTCTTG 1093
||||||| | |||||| ||| |||||||||||||||| ||| ||| |||||||||||||
Sbjct 298 GGGTATCAAAAAATGA-TTCTTCTTACCAAACTTAATGACAA-AAAGGGTGGATTTCTTG 355
Query 1094 TGAACAATAAAGTCAAGATTGTTGTGGAGGTAGACGTTCTTCAAGTTG-TTGGCGGATTA 1152
|||||||| ||||||||||||||||||||||||| |||||||||| || ||||| ||||
Sbjct 356 TGAACAATGAAGTCAAGATTGTTGTGGAGGTAGATGTTCTTCAAG-TGATTGGCAAATTA 414
Query 1153 GATG--T-T------TCTCAAGAGGTGACTCAACCTCTGAAAAGGATAAGGCTAAACGAT 1203
|||| | | ||||||||||| |||||||||||||||||||||| |||||| | |
Sbjct 415 GATGTTTCTGAGGAATCTCAAGAGGTAACTCAACCTCTGAAAAGGATAAAGCTAAATGGT 474
Query 1204 GATGGTGCAGCATCTACTCATTTGCAAACCATTGATGTCAATGGGTTTCTAGTTCTTGCT 1263
||||||| | | || ||| | | | | ||||||||||| |||| ||||||| ||
Sbjct 475 GATGGTGTGGTAACT--TCA--T-C--A--GTAGATGTCAATGGCTTTCAAGTTCTTCCT 525
Query 1264 TCACAGGTGGAATCTGTTAAACGTATATTCGAAAGCCACCCTGAAATGACATTAACGTTC 1323
||| ||| ||||||||| ||||| |||||||||| ||||| |||||| || ||| ||||
Sbjct 526 TCAGAGGCGGAATCTGTGAAACGCATATTCGAAAAACACCCAGAAATGGCACTAAAGTTC 585
Query 1324 CGAGCAAATAACCAACAAT-TGAGGACTTCATGCATAAATGTCCTCCTCAACCTAATTGA 1382
|| ||||| ||||||| || ||||||| ||||||||||||||| ||||||||||||| |
Sbjct 586 CGGGCAAAGAACCAAC-ATCTGAGGACATCATGCATAAATGTCGTCCTCAACCTAATCAA 644
Query 1383 GACAATGTG-CATGTCACCGCAAAACCTTTCTATTGCTGACCTGGGCCAAACAGAGCAAG 1441
|| |||| || |||| |||| || |||| |||| |||| |||| ||| |||||||||
Sbjct 645 AACGTTGTGTCA-ATCACTGCAAGACATTTCCATTGATGACATGGGACAAGCAGAGCAAG 703
Query 1442 CACTAACATACCTGAAAAATTCGGGCTTTAAGGTGGATTGGTTGGAGCGTAAACTGGAGG 1501
|||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 704 CACTAACATATCTGAATAATTCGGGCTTTAAGGTGGATTGGTTGGAGGGTAAACTGGAGG 763
Query 1502 AAGTAACGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCGGATGCAAGGATTAGAGG 1561
|||||| |||||||||||| |||||| |||||||| |||||||||||| ||||||||
Sbjct 764 AAGTAAAGGAAAAGAAGATGGAAGAGCTGTTTGGTAAGACTCGGATGCAAGAATTAGAGG 823
Query 1562 AAGACCTGAAGG 1573
|||| || ||||
Sbjct 824 AAGAACTCAAGG 835
Score = 420 bits (227), Expect = 2e-116
Identities = 314/355 (88%), Gaps = 9/355 (3%)
Strand=Plus/Plus
Query 655 CTCAGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCAT-TGATGACCTAGG 713
|||| ||||||| ||||| |||| |||||||||||| ||||||| | ||||| | ||
Sbjct 1255 CTCAACCTAATCGAGACGATGTGTGTGTCACTGCAAGACCTTTCCATAT-ATGACTTGGG 1313
Query 714 CCAAACAGAGCAAGTACTAACATTCCTGCAA-AATTCTGGATTTAAGGTGGATTGGCTGG 772
|||| ||||||||| |||||||| |||| || ||||| |||||||||||||||||| |||
Sbjct 1314 CCAAGCAGAGCAAGCACTAACATACCTG-AATAATTCGGGATTTAAGGTGGATTGGTTGG 1372
Query 773 AGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCGGA 832
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1373 AGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCACATTGGTAAGTCTCGGA 1432
Query 833 TGCAAGGATTAGAGGAAGACCTGAAGGTCTTCAAGAAGAAGTGCTCTGACATAGAAGCTC 892
|||||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||| ||
Sbjct 1433 TGCAAGAATTAGAGAAAGACCTGAAGCTCTTCAAGCAGAAGTGCTCTGACATAGAAGATC 1492
Query 893 TACTGGAGAAAGAGAAGGAAGAACTCAAGGGA-TTGAAGCAAAAGTGCTCAGACATAGAA 951
||||||||||||||||||||||||||||| | |||||| |||||||||| |||| ||||
Sbjct 1493 TACTGGAGAAAGAGAAGGAAGAACTCAAGA-ACTTGAAGAAAAAGTGCTCGGACACAGAA 1551
Query 952 GCTCTGCTGGAGAAAGAGAAGGGAAAGGTGTTGGCTGCTGCTGCCAGAACTCCTC 1006
||||| || |||||||||||| |||||||||||| || | |||||| ||||||
Sbjct 1552 GCTCTACTTGAGAAAGAGAAGAAAAAGGTGTTGGCCGC--C-GCCAGAGCTCCTC 1603
Score = 272 bits (147), Expect = 6e-72
Identities = 186/205 (91%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 1369 CTCAACCTAATTGAGACAATGTGCATGTCACCGCAAAACCTTTCTAT-TGCTGACCTGGG 1427
||||||||||| ||||| ||||| |||||| |||| ||||||| || | |||| ||||
Sbjct 1255 CTCAACCTAATCGAGACGATGTGTGTGTCACTGCAAGACCTTTCCATAT-ATGACTTGGG 1313
Query 1428 CCAAACAGAGCAAGCACTAACATACCTGAAAAATTCGGGCTTTAAGGTGGATTGGTTGGA 1487
|||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1314 CCAAGCAGAGCAAGCACTAACATACCTGAATAATTCGGGATTTAAGGTGGATTGGTTGGA 1373
Query 1488 GCGTAAACTGGAGGAAGTAACGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCGGAT 1547
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 1374 GCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCACATTGGTAAGTCTCGGAT 1433
Query 1548 GCAAGGATTAGAGGAAGACCTGAAG 1572
||||| ||||||| |||||||||||
Sbjct 1434 GCAAGAATTAGAGAAAGACCTGAAG 1458
Score = 246 bits (133), Expect = 3e-64
Identities = 206/238 (87%), Gaps = 17/238 (7%)
Strand=Plus/Plus
Query 319 CTTACCAAACTTAATGCCAAACATGGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTT 378
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 1033 CTTACCAAACTTAATGCCAAAGAAGGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTT 1092
Query 379 GCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATTAGATGTTTCTA-AGGAATCTCAAGA 437
|||||||| |||||||| ||||||||||||| |||||||||| || ||| |||||||||
Sbjct 1093 GCGGAGGTTTATGTTCTTCAAGTTATTGGCAATTTAGATGTTT-TAGAGGGATCTCAAGA 1151
Query 438 GGTAATTAAACCTCGGAAAAGGATGAGGCTATATGGTGATGGTGGTGCGGTGTCTAGTCA 497
|||| |||||||| ||||||||| |||||| ||| |||||||| ||| | |||||||
Sbjct 1152 CGTAACTAAACCTCTGAAAAGGATAAGGCTAAATGATGATGGTGCAGCG-T--CTAGTCA 1208
Query 498 TTTGCACAAGGAAACTTCATCAGTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 555
|||||| || | ||| | |||||||||||||||||||||||||||||||||
Sbjct 1209 TTTGCA-AA-----C--CAT--G--GATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 1254
Score = 182 bits (98), Expect = 1e-44
Identities = 114/122 (93%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 1569 GAAGGAAGAACTCAAGGACTTGAAGCAAAAGTGCTCGGACACAGAAGCTCTGCTCGAGAA 1628
|||||||||||||||| |||||||| ||||||||||||||||||||||||| || |||||
Sbjct 1506 GAAGGAAGAACTCAAGAACTTGAAGAAAAAGTGCTCGGACACAGAAGCTCTACTTGAGAA 1565
Query 1629 AGAGAAGACAAAGGTGTTGGCCGCCGCCAGAGCTCCTCCTCTAACCTTGGATGATGTTGT 1688
|||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| ||||
Sbjct 1566 AGAGAAGAAAAAGGTGTTGGCCGCCGCCAGAGCTCCTCCTCTAACGTTGAATGATTTTGT 1625
Query 1689 CT 1690
||
Sbjct 1626 CT 1627
Score = 147 bits (79), Expect = 4e-34
Identities = 87/91 (96%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 1569 GAAGGAAGAACTCAAGGACTTGAAGCAAAAGTGCTCGGACACAGAAGCTCTGCTCGAGAA 1628
||| |||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 882 GAAAGAAGAACTCAAGGACTTGAAGCAAAAATGCTCGGACACAGAAGCTCTACTTGAGAA 941
Query 1629 AGAGAAGACAAAGGTGTTGGCCGCCGCCAGA 1659
|||||||||||||||||||||||||||||||
Sbjct 942 AGAGAAGACAAAGGTGTTGGCCGCCGCCAGA 972
> Ahg937123 jgi|Araly1|937123|scaffold_501314.1
Length=1048
Score = 935 bits (506), Expect = 0.0
Identities = 855/1012 (84%), Gaps = 69/1012 (7%)
Strand=Plus/Plus
Query 11 AGAAATTCACTTGGGTGATTAAGAATTTCTCATCTTTGCAATCTGAGTACA-TTAAATCT 69
|||||||||||||||||||||||||||||||||||||||||||| || || || | |||
Sbjct 43 AGAAATTCACTTGGGTGATTAAGAATTTCTCATCTTTGCAATCTAAGG-CAATTGATTCT 101
Query 70 GAT-ATATTCGTGATCGGTGGCTGCAAATGGTGTCTTTTGGCCTATCCCAATGGAAAACA 128
||| | ||| ||| ||||||||||||||||||||||| |||||| ||| || ||| | ||
Sbjct 102 GATGA-ATTTGTGGTCGGTGGCTGCAAATGGTGTCTTGTGGCCTCTCCTAAGGGATATCA 160
Query 129 GAATGCTAGTTATTTGTCTCTGTATC-TGGATGGTC-CTACTTTAAAAACTTTGCCTTGT 186
|||||||| |||||||||||||| || ||| |||| |||||||||||||||||||||||
Sbjct 161 GAATGCTAATTATTTGTCTCTGT-TCCTGG-TGGTTGCTACTTTAAAAACTTTGCCTTGT 218
Query 187 GGATGTAGA---AG--G-CGCATAAGATTTCGCCTAACTGTTGTAAATCAACTCTCCGAA 240
|| ||| || || | | |||||||||||||||||||||||||||||||||||||||
Sbjct 219 GGTTGTGGATGGAGAAGACACATAAGATTTCGCCTAACTGTTGTAAATCAACTCTCCGAC 278
Query 241 AACCTCTCCCGACGAGGAGAAGGAA-AACGA-TGGTTTGATAAAAAGCTTCCTCTGTGTG 298
||||||||||||||||||||| || || || ||||| ||| || | | | || | ||||
Sbjct 279 AACCTCTCCCGACGAGGAGAAA-AAGAA-GAATGGTTAGATGAATACCGTACTATCTGTG 336
Query 299 GGTATGAAGAAGTGCTTCTTCTTACCAAACTTAATGCCAAACATGGTGGATTTCTTGTGA 358
||||| || || ||||||| ||| ||||||||||||||||| | ||||||||||||||||
Sbjct 337 GGTATCAAAAAATGCTTCTCCTTTCCAAACTTAATGCCAAAGAAGGTGGATTTCTTGTGA 396
Query 359 ACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATTAGATG 418
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct 397 ACAATGAAGTCAAGATTGTTGCGGAGGTTGATGTTCTTCAAGTTATTGGCAAATTAGATG 456
Query 419 TTTCTAAGGAATCTCAAGAGGTAATTAAACCTCGGAAAAGGATGAGGCTATATGGTGATG 478
||||| |||| |||||||||||| | |||||| ||||||||| | |||| || |||||
Sbjct 457 TTTCTGAGGATTCTCAAGAGGTAGCTCAACCTCTGAAAAGGATTAAGCTA-AT--TGATG 513
Query 479 GTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTTCATCAGTAGATGTCAATGGGTTTC 538
|||||| | || || | || | ||| ||| | ||||||||||||||||
Sbjct 514 GTGGTGT--T-TCG-GTAA-----AC--G-AAAG--CAT---T-GATGTCAATGGGTTTC 555
Query 539 AAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTCGAAAGACACCCATACATGG 598
||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||
Sbjct 556 AAGTTCTTCCTTCACAGGCGGAATCCGTGAAACGTATATTCGAAAGACACCCAGACATGG 615
Query 599 CATTAGAGTTCCGAGCAAAGAACCAACAGT-TGAGGGCATCATGTATAAATGTCCTCCTC 657
|||||||||| |||| || ||||||||| | ||||| ||| ||| |||||| ||||||||
Sbjct 616 CATTAGAGTTTCGAGTAATGAACCAACA-TATGAGGACATTATGCATAAATCTCCTCCTC 674
Query 658 AGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCATTGATGACCTAGGCCAA 717
| | ||||| |||| ||||||||||||||| |||| ||||||||| |||| || ||||||
Sbjct 675 AACATAATCGAGACTTTGTGCCAGTCACTGAAAGACATTTCCATTCATGAACTGGGCCAA 734
Query 718 ACAGAGCAAGTACTAACATTCCTGCAAA-ATTCTGGA-TTTAAGGTGGATTGGCTGGAGC 775
||||| ||| ||||| || |||| ||| |||| ||| ||||||||||||||| | ||||
Sbjct 735 GCAGAGAAAGCACTAAGATACCTG-AAAGATTC-GGACTTTAAGGTGGATTGGTTAGAGC 792
Query 776 GTAAACTGGAGGAAGTAAAGGAAAAGAAGATCCAAGAGCACATTGGTAAGTCTCGGATGC 835
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 793 ATAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCAGATTGGTAAGTCTCGGATGC 852
Query 836 AAGGATTAGAGGAAGACCTGAAGGTCTTCAAGAAGAAGTGCTCTGACATAGAAGCTCTAC 895
||| |||||||||||| ||||||||||||||| |||| ||||||||||||||||||| ||
Sbjct 853 AAGAATTAGAGGAAGAACTGAAGGTCTTCAAGCAGAATTGCTCTGACATAGAAGCTCAAC 912
Query 896 TGGAGAAAGAGAAGGAAGAACTCAAGGGATTGAAGCAAAAGTGCTCAGACATAGAAGCTC 955
|||||||||| || | | | || | | | ||||||||||||||||||
Sbjct 913 TGGAGAAAGA-AA--A-G--C--AA---A---A-G------TGCTCAGACATAGAAGCTT 951
Query 956 TGCTGGAGAAAGAGAAGGGAAAGGTGTTGGCTGCTGCTGCCAGAACTCCTCT 1007
||||||||||||||||| |||||| ||||| | ||||||||| |||||||
Sbjct 952 TGCTGGAGAAAGAGAAGAAAAAGGTATTGGC--C-GCTGCCAGAGCTCCTCT 1000
> Ahg897256 jgi|Araly1|897256|Al_scaffold_0005_1222
Length=1044
Score = 776 bits (420), Expect = 0.0
Identities = 769/927 (83%), Gaps = 66/927 (7%)
Strand=Plus/Plus
Query 16 TTCACTTGGGTGATTAAGAATTTCTCATC---TTTGCAATCTGAG-TACATTAAATCTGA 71
||||||||| |||||||||| |||||||| ||||||||||||| || ||| | |||||
Sbjct 13 TTCACTTGGATGATTAAGAACTTCTCATCTAATTTGCAATCTGAGTTA-ATTGATTCTGA 71
Query 72 T-ATATTCGTGATCGGTGGCTGCAAATGGTGTCTTTTGGCCTATCCCAAT-GGAAAACAG 129
| | ||| ||||||||||||||||||| | | ||| || | || ||| ||||
Sbjct 72 TGA-ATTTGTGATCGGTGGCTGCAAAT-G-G---TTT---CT-T----ATGGGAGAACAA 117
Query 130 AATGCTAGTTATTTGTCTCTGTATCTGGATGG-TCCT-ACTTTAAAAACTTTGCCTTGTG 187
|||| || |||||| ||||||| ||||| ||| | || | ||| |||| |||||||||||
Sbjct 118 AATGATAATTATTTTTCTCTGTTTCTGG-TGGTTGCTGATTTTCAAAA-TTTGCCTTGTG 175
Query 188 GATGTAGAAGGCGCAT-AAGATTTCGCCTAACTGTTGTAAATCAACTCTCCGA-AAACCT 245
|||| ||||| | | | ||||||||| |||||||||||||||||| | ||||| ||| ||
Sbjct 176 GATGGAGAAGACAC-TCAAGATTTCGTCTAACTGTTGTAAATCAAATTTCCGATAAA-CT 233
Query 246 CTCC-CG-A-CGAG----G-----AGAAGGAAAACGATGGTTTGAT-AAAAAGCTTCCTC 292
|||| | | |||| | |||| | |||||||||| ||| |||||| |||||
Sbjct 234 CTCCTTGCATCGAGTTTTGTCTACAGAAACAGAACGATGGTTCGATCAAAAAG-TTCCTG 292
Query 293 TGT-GTGGGTATGAAGAAGTG-CTTCTTCTTACCAAACTTAATGCCA-AACATGGTGGAT 349
| | |||||||| |||| || ||| |||| ||||||| |||| || || | |||||||
Sbjct 293 T-TCATGGGTATGCAGAAATGATTTC-TCTTGCCAAACTAAATGTCAGAA-AAGGTGGAT 349
Query 350 TTCTTGTGAACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTTATTGGCA 409
|||||||||||||||||||||||||||||| ||||| ||||||||| |||||| |||||
Sbjct 350 TTCTTGTGAACAATGAAGTCAAGATTGTTGTTGAGGTTGATGTTCTTCAAGTTACTGGCA 409
Query 410 AATTAGATGTTTCTAAGGAATCTCAAGAGG-TA-ATTAAACCTCGGAAAAGGATGAGGCT 467
|||||||||||||| ||||||||| ||||| || | |||| | | |||||||| | |||
Sbjct 410 AATTAGATGTTTCTGAGGAATCTCTAGAGGATACAC-AAACTTTG-AAAAGGATAAAGCT 467
Query 468 ATATGGTGATGGTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTTCATCAGT-AGATG 526
| | ||| | |||| || | |||||||||||||||| ||||||||||||||||| | |||
Sbjct 468 AAAAGGTTACGGTG-TG-G-TGTCTAGTCATTTGCATAAGGAAACTTCATCAGTCA-ATG 523
Query 527 TCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTCGAAAGAC 586
|||||||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||
Sbjct 524 TCAATGGGTTTCTTGTTCTTCCTTCTCAGGTGGAATCTGTGAAACGTATATTCGAAAGAC 583
Query 587 ACCCATACATGGCATTAGAGTTCCGAGCAAAGAACCAACAGT-TGAGGGCATCATGTATA 645
||||| |||||||| |||||||||||||||||||| |||| | ||||| ||| || ||
Sbjct 584 ACCCAGACATGGCAATAGAGTTCCGAGCAAAGAACAAACA-TATGAGGACATTATCCATC 642
Query 646 AATGTCCTCCTCAGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGA-TATTTCCATTGA 704
|| ||||||||| | ||||| |||| |||||||||||| ||||||| | ||||||||||
Sbjct 643 AACCTCCTCCTCAACATAATCGAGACTTTGTGCCAGTCATTGCAAGACT-TTTCCATTGA 701
Query 705 TGACCTAGGCCAAACAGAGCAAGTACTAACATTCCTGCAAA-ATTCTGGA-TTTAAGGTG 762
|||||| ||||| ||||| ||| ||||| || |||| ||| |||| ||| |||||||||
Sbjct 702 TGACCTTTGCCAAGCAGAGAAAGCACTAAGATACCTG-AAAGATTC-GGACTTTAAGGTG 759
Query 763 GATTGGCTGGAGCGTAAACTGGAGGAAGTAAAGGAAAAGAAGATCCAAGAGCACATTGGT 822
|||||| | |||| |||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 760 GATTGGTTAGAGCATAAACTGGAGGAAGTAAAGGAAAAGAAGATGGAAGAGCAGATTGGT 819
Query 823 AAGTCTCGGATGCAAGGATTAGAGGAAGACCTGAAGGTCTTCAAGAAGAAGTGCTCTGAC 882
||| ||||| |||||| | |||||||||||||||||||||||||| |||| || ||||||
Sbjct 820 AAGACTCGGGTGCAAGAACTAGAGGAAGACCTGAAGGTCTTCAAGCAGAATTGTTCTGAC 879
Query 883 ATAGAAGCTCTACTGGAGAAAGAGAAG 909
|||||||||| ||||||||||||||||
Sbjct 880 ATAGAAGCTCAACTGGAGAAAGAGAAG 906
Score = 97.1 bits (52), Expect = 4e-19
Identities = 82/95 (86%), Gaps = 8/95 (8%)
Strand=Plus/Plus
Query 927 GAAGCAAAAGTGCTCAGACATAGAAGCTCTGCTGGAGAAAGAGAAGGGAAAGGTGTTGGC 986
|||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||
Sbjct 903 GAAGCAAAAGTGCTCAGACATAGAAGCTTTGCTGGAGAAAGAGAAGACAAAGGTATTGGC 962
Query 987 TGCTGCTGCCAGAA-CTCCTC-T--AACGTTAGAT 1017
| ||||||| || |||||| | |||||| |||
Sbjct 963 --C-GCTGCCA-AAGCTCCTCCTCTAACGTTGGAT 993
> Ahg930958 jgi|Araly1|930958|scaffold_303415.1
Length=959
Score = 719 bits (389), Expect = 0.0
Identities = 568/649 (88%), Gaps = 34/649 (5%)
Strand=Plus/Plus
Query 343 GGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTT 402
||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 262 GGTGGATTTCTTGTGAACAATGAAGTCAAGATTGTTGTGGAGGTAGATGTTCTTCAAGTT 321
Query 403 ATTGGCAAATTAGATGTTTCTAAGGAATCTCAAGAGGTAATTAAACCTCGGAAAAGGATG 462
||||||||||||||||||||| ||||||||| |||||||| |||||| ||| |||||
Sbjct 322 ATTGGCAAATTAGATGTTTCTGAGGAATCTCTAGAGGTAAACCAACCTCTGAATAGGATA 381
Query 463 AGGCTATATGGTGATGGTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTTCATCAGTA 522
| |||| ||||||| |||| ||| | | ||||||||||||
Sbjct 382 AAGCTAAATGGTGA---TGGT---GTG----G-----T---------AACTTCATCAGTT 417
Query 523 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTCGAA 582
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 418 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAACGTATATTCGAA 477
Query 583 AGACACCCATACATGGCATTAGAGTTCCGAGCAAAGAACCAACAGTTGAGGGCATCATGT 642
| ||||||| |||||||| || | |||||||||||||||||||| |||| | |||||||
Sbjct 478 AAACACCCAGACATGGCACTAAAATTCCGAGCAAAGAACCAACATTTGAAGACATCATGC 537
Query 643 ATAAATGTCCTCCTCAGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCATT 702
|||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct 538 ATAAATGTCCTCCTCAGCTTAATCAAGACGTTGTGCCAGTCACTGCAAGACCTTTCCATT 597
Query 703 GATGACCTAGGCCAAACAGAGCAAGTACTAACAT-TCCTGCAA-AATTCTGGA-TTTAAG 759
|||||||| |||||| ||||||||| |||||||| || || || |||| ||| ||||||
Sbjct 598 GATGACCTGGGCCAAGCAGAGCAAGCACTAACATATC-TG-AATAATT-TGGGCTTTAAG 654
Query 760 GTGGATTGGCTGGAGCGTAAACTGGAGGAAGTAAAGG-AAAAGAAGATCCAAGAGCACAT 818
||||||||| ||||| ||||||||||||||||||||| |||| ||||| ||||||| ||
Sbjct 655 GTGGATTGGTTGGAGTGTAAACTGGAGGAAGTAAAGGCAAAA-AAGATGGAAGAGCAGAT 713
Query 819 TGGTAAGTCTCGGATGCAAGGATTAGAGGAAGACCTGAAGGTCTTCAAGAAGAAGTGCTC 878
||||||| |||||||||||| ||||||| ||||||||||| |||| ||||||||||||||
Sbjct 714 TGGTAAGACTCGGATGCAAGAATTAGAGAAAGACCTGAAGCTCTTTAAGAAGAAGTGCTC 773
Query 879 TGACATAGAAGCTCTACTGGAGAAAGAGAAGGAAGAACTCAAGGGA-TTGAAGCAAAAGT 937
||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||| |
Sbjct 774 TGACATAGAAGCTTTGCTGGAGAAAGAGAAGGAAGAACTCAAGG-ACTTGAAGCAAAAAT 832
Query 938 GCTCAGACATAGAAGCTCTGCTGGAGAAAGAGAAGGGAAAGGTGTTGGC 986
||||||||| ||||||||||||||| ||||||||| ||||||||||||
Sbjct 833 GCTCAGACACAGAAGCTCTGCTGGAAAAAGAGAAGACAAAGGTGTTGGC 881
Score = 128 bits (69), Expect = 1e-28
Identities = 77/81 (95%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 1569 GAAGGAAGAACTCAAGGACTTGAAGCAAAAGTGCTCGGACACAGAAGCTCTGCTCGAGAA 1628
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||
Sbjct 801 GAAGGAAGAACTCAAGGACTTGAAGCAAAAATGCTCAGACACAGAAGCTCTGCTGGAAAA 860
Query 1629 AGAGAAGACAAAGGTGTTGGC 1649
|||||||||||||||||||||
Sbjct 861 AGAGAAGACAAAGGTGTTGGC 881
> Ahg937127 jgi|Araly1|937127|scaffold_501318.1
Length=586
Score = 427 bits (231), Expect = 1e-118
Identities = 463/569 (81%), Gaps = 40/569 (7%)
Strand=Plus/Plus
Query 1 ATGGGGTATGAGAAATTCACTTGGGTGATTAAGAATTTCTCATCTTTGCAATCTGAGTAC 60
||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||| |
Sbjct 21 ATGGGAAATGAGAAGTTCACTTGGGTGATTAACAATTTCTCATCTTTGCAATCTAAGT-C 79
Query 61 A-TTAAATCTGATATA-TTCGTGATCGGTGGCTGCAAATGGTGTCTTTTGGCCTATCCCA 118
| || |||||||| | ||||||||||||||||||||||||| |||| |||| |||||||
Sbjct 80 ATTTTTATCTGATA-AGTTCGTGATCGGTGGCTGCAAATGGTATCTTGTGGCGTATCCCA 138
Query 119 ATGGAAAACAGAATG-CTAGTTATTTGTCTCTGTATCTGGATGGT-CCTACTTTAAAAAC 176
|||| ||||| || | || |||||||||||| ||| ||| |||| ||| ||| ||||
Sbjct 139 ATGGCAAACATAA-GAATAATTATTTGTCTCTATATTTGG-TGGTAGCTAATTTTGAAAC 196
Query 177 TTTGCCTTGTGGATGTAGAAGGCGCATAAGAT-TTCGCCTAACTGTTGTAAATCAACTCT 235
||||||||||||||| || || | ||||| || || || ||||||||| |||||||||||
Sbjct 197 TTTGCCTTGTGGATGGAGTAGACACATAAAATGTT-GCTTAACTGTTGAAAATCAACTCT 255
Query 236 CCGAAAACCTCTCCCGACGAG-GAGAAGGAAA-AC---GATGGTTTGAT--AAAAAGCTT 288
|||| |||||||| | || || ||||| |||| || | ||||| || ||| || ||
Sbjct 256 CCGACAACCTCTCACAAC-AGCGAGAA-GAAACACAGTGCTGGTTACATCGAAAGAGATT 313
Query 289 CCTCT-GTGTGGGTATGAAGAAGTG-CTTCTTCTTACCAAACTTAATGCCAAACATGGTG 346
| | |||||| |||| || ||| |||| ||||||||||||||| | ||||
Sbjct 314 --T-TACCAAGGGTATCCAGAAATGATTTC-CCTTAGAAAACTTAATGCCAAAGAAGGTG 369
Query 347 GATTTCTTGTGAACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTTATTG 406
||||| ||||||||||||||||||||||| ||| |||||| || |||||| |||||||||
Sbjct 370 GATTTGTTGTGAACAATGAAGTCAAGATTATTGTGGAGGTTGACGTTCTTCAAGTTATTG 429
Query 407 GCAAATTAGATGTTTCTAAGGAATCTCAAGAGGTAATTAAACCTCGGAAAAGGATGAGGC 466
||||||||||||||||| ||| |||||||||||| | | ||||| ||||| ||||||||
Sbjct 430 GCAAATTAGATGTTTCTGAGGGATCTCAAGAGGTTACTCAACCTTTGAAAATGATGAGGC 489
Query 467 TATATGGTGATGGTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTTCATCAGTAGATG 526
|| | ||||| |||||| | ||||||||||||| | |||| ||| | ||||
Sbjct 490 TA-A--ATGATGATGGTGCAGCGTCTAGTCATTTG--C----AAAC--CAT--G--GATG 534
Query 527 TCAATGGGTTTCAAGTTCTTCCTTCACAG 555
|||||||||||||||||||||||||||||
Sbjct 535 TCAATGGGTTTCAAGTTCTTCCTTCACAG 563
> Ahg938811 jgi|Araly1|938811|scaffold_503002.1
Length=1099
Score = 272 bits (147), Expect = 6e-72
Identities = 514/685 (75%), Gaps = 50/685 (7%)
Strand=Plus/Plus
Query 11 AGAAATTCACTTGGGTGATTAAGAATTTCT-CATCTTTGCAATCTGAGTACAT-TAAATC 68
|||| || |||||||||||||||||||| | || |||||||||||||| | || | | ||
Sbjct 139 AGAAGTTTACTTGGGTGATTAAGAATTTTTCCA-CTTTGCAATCTGAGAAAATCT-ATTC 196
Query 69 TGATATATTCGTGATCGGTGGCTGCAAATGGTGTCTTTTGGCCTATCCCAATGGAAAACA 128
|| | ||| |||||| | |||||||||||| ||||||| |||| |||||| || | | |
Sbjct 197 AGACAAATTTGTGATCAGCGGCTGCAAATGGCGTCTTTTAGCCTTTCCCAA-GGGAGATA 255
Query 129 GAATGCT-AGTTATTTGTCTCTGTATCTGGATGGTCCT-ACTTTAAAAACTTTGCCTTGT 186
|| | | | | ||| ||||||||||| || | | || | ||| ||| | ||||||| |
Sbjct 256 -AA-G-TCAAATGTTTATCTCTGTATCTTGAAGTTGCTGA-TTTTAAATCCTTGCCTTCT 311
Query 187 GGATGTAGAAGGCGCATAAG-ATTT-CGCCTAACTGTTGTAAATCAACTCTCCGA-AAAC 243
||||| |||| | | || |||| || ||||| | ||||| ||| | | || |||
Sbjct 312 GGATGGCGAAGAAACGT-AGAATTTACG-ATAACTCTAGTAAAACAATTTTGTGAGAAA- 368
Query 244 CTCTCCCGA-CGAGGAG-AAGGAAAACGA-TGGTTTGATAAAAAGCTTCC--TCTGTGTG 298
|||| | | ||| || || | ||| | ||||| || | ||| | || ||| | |
Sbjct 369 TTCTCACTAGCGA-AAGTAA-CACAAC-ATTGGTTAGACCACAAGGTACCAGACTG-G-G 423
Query 299 GGTATGAA-GAAGTGCTTCTTCTTACCAAACTTAATGCCAAACATGGTGGATTTCTTGTG 357
| | | || | || ||| ||||||| |||| ||| ||| ||||||| |||||||||
Sbjct 424 GTTTTAAATCCA-TGATTCCCCTTACCACACTTCATGACAAGGATGGTGGGTTTCTTGTG 482
Query 358 AACAATGAAGTCAAGATTGTTGCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATTAGAT 417
||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||
Sbjct 483 AACGATGAACTCAAGATTGTTGCTGAGGTCGATGTTCTTGAAGTTATTGGCAAACTAGAT 542
Query 418 GTTTCTAAGGAATCTCAAGAGGTAATTAAACCTCG-GAAAAGGATGAGGCTATATGGTGA 476
|| | ||||||| |||||| || ||||| | ||||| ||| | || | | |||
Sbjct 543 GTACCCGGGGAATCTGAAGAGGAAACCCAACCT-GTGAAAAAGATAAAGC-AGA--ATGA 598
Query 477 TGGTGGTGCGGTGTCTAGTCATTTGCACAAGGAAACTT-C-----A-TCAGTAGATGTCA 529
|| |||||||||||||||| || ||| ||||| | || | | | || |||||||
Sbjct 599 TGATGGTGCGGTGTCTAGTGATCTGCTTAAGGAGA-TTCCAGGAGATTTGGTGGATGTCA 657
Query 530 ATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGC-GTATATTCGAAAGACAC 588
||||||||||||||||||||||||||| || | ||||| || |||| || |||| ||||
Sbjct 658 ATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGA-GCCGTATTTTTGAAAAACAC 716
Query 589 CCATACA-TGGCATTAGAGTTCCG-AGCAAAGAACCAACAGT-TGAGGGCATCATGTATA 645
||| | | || ||| ||| | ||| | ||||||||||| | | |||| |||||| ||
Sbjct 717 CCAGAGACTG-CATCAGAATGCCGTA-CAAAGAACCAAGA-TCTGAGAACATCATACATG 773
Query 646 AATGTCCTCCTCAGCCTAATCAAGA 670
||||||||| | ||| |||||||||
Sbjct 774 AATGTCCTCATAAGCGTAATCAAGA 798
> Ahg924373 jgi|Araly1|924373|scaffold_105654.1
Length=1003
Score = 244 bits (132), Expect = 1e-63
Identities = 316/402 (79%), Gaps = 24/402 (6%)
Strand=Plus/Plus
Query 318 TCTTACCAAACTTAATGCCAAACATGGTGGATTTCTTGTGAACAATGAAGTCAAGATTGT 377
||||||||||||| ||| |||| ||| ||||||||||||||| ||||| ||| |||||
Sbjct 353 TCTTACCAAACTTCATGACAAAGATGAAGGATTTCTTGTGAACGATGAACTCATTATTGT 412
Query 378 TGCGGAGGTAGATGTTCTTGAAGTTATTGGCAAATTAGATGTTTCTAAG-G-AATCTCAA 435
||| |||||||||||||||||||||||||||| ||| ||||| || || | ||||| ||
Sbjct 413 TGCTGAGGTAGATGTTCTTGAAGTTATTGGCACATTGGATGTGTC--AGTGAAATCTAAA 470
Query 436 GAGGT-AATTAAACCTCGGAAAAGGATGAGGCTATATG-GTGATGGTGGTGCGGTGTCTA 493
|| || || |||| ||||| ||| | |||| ||| | ||| | |||||| |||||
Sbjct 471 GA-GTCAAGCCGCCCTCTGAAAAAGATAAAGCTAAATGAG-GAT--T-GTGCGGAGTCTA 525
Query 494 GTCATTTGCA-CAAGGAAACTTCATCAGT-------AG-AT-GTCAATGGGTTTCAAGTT 543
| | | | | ||||||| |||||||||| || || || |||||||||||||||
Sbjct 526 ATGAGTCG-ATCAAGGAAGCTTCATCAGTAAAAGAAAGCATGGTTAATGGGTTTCAAGTT 584
Query 544 CTTCCTTCACAGGCGGAATCTGTGA-AGCGTATATTCGAAAGACACCCATACATGGCATT 602
||||||||||||| |||||||||| | |||||||| |||||||| ||| |||| | |
Sbjct 585 CTTCCTTCACAGGAAGAATCTGTGAGA-CGTATATTTGAAAGACATCCAGACATTGTGGT 643
Query 603 AGAGTTCCGAGCAAAGAACCAACAGTTGAGGGCATCATGTATAAATGTCCTCCTCAGCCT 662
||| ||||| ||||||||||||||| | ||| || |||| || ||| || | |||||| |
Sbjct 644 AGACTTCCGTGCAAAGAACCAACAGCTCAGGACAACATGGATGAATTTCTTGCTCAGCTT 703
Query 663 AATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCATTGA 704
||| ||||| ||||| ||||| | || || |||||| |||
Sbjct 704 GATCGAGACGCTGTGCAAGTCAATTCAGGAGCTTTCCAATGA 745
> Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854
Length=1308
Score = 206 bits (111), Expect = 6e-52
Identities = 310/402 (77%), Gaps = 30/402 (7%)
Strand=Plus/Plus
Query 523 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGC-GTATATTCGA 581
||| |||||||||||||||||||||||||||||| | ||| ||||| || |||| || ||
Sbjct 871 GATATCAATGGGTTTCAAGTTCTTCCTTCACAGGTGAAATTTGTGA-GCCGTATTTTTGA 929
Query 582 AAGACACCCATACATGGCATTAG-AGTTCCGA-GCAAAGAACCAACAG-TTGAGGGCATC 638
|| | ||||| |||| ||| ||| | |||| | |||||||||||||| || || || |
Sbjct 930 AAAATACCCAGACATTGCAGTAGGA-TTCC-ATGCAAAGAACCAACATCTTAAGA-CAGC 986
Query 639 ATGTATAAATGTCCTCCTCAGCCTAATCAAGACGTTGTGCCAGTCAC-TGCAAGATATTT 697
||| || ||||||||||||||||||||| |||| |||| ||||||| | || || | |
Sbjct 987 ATGCATGAATGTCCTCCTCAGCCTAATCGAGACACTGTGTCAGTCACCT-CAGGAGCTCT 1045
Query 698 CCATTGATGACCTAGGCCAAA-CAGAGCAA-G-TACTAACAT-TCCTGCAAA-ATTCTGG 752
| | ||| || | || || |||| ||| | | ||||||| | || ||| || | ||
Sbjct 1046 CAAATGAAGATAT-GGTGGAAGCAGA-CAATGCT-CTAACATATG-TG-AAAGATGCGGG 1100
Query 753 ATTTAAGGTGGATTGGCTGGAGCGTAAA-CTGGAGGAAGTAAAGGAAAAGAAGATCCAAG 811
||||||||||||||| ||||| | || |||||||||||||| ||||||||| | ||
Sbjct 1101 CTTTAAGGTGGATTGGTTGGAGA-TGAAGCTGGAGGAAGTAAAAGAAAAGAAGGTGGTAG 1159
Query 812 AGCACATTGGTAAGTCTCGGATGCAAG-GATTAGAGGAAGACCTGAAGGTC-TTCAAGAA 869
|||| | |||| || ||||||| |||| | |||||||| ||| || | | || | |
Sbjct 1160 AGCAGACTGGTGAGACTCGGATTCAAGAG-TTAGAGGAGGACATGTTGAACATT-ATGT- 1216
Query 870 G-AAGTGCTCTGACATAGAA-GCTCTACTGGAGAAAGAGAAG 909
| ||||| || ||||| ||| ||| |||||||||| ||||||
Sbjct 1217 GTAAGTGGTCAGACAT-GAAAGCTGTACTGGAGAAGGAGAAG 1257
> Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754
Length=918
Score = 119 bits (64), Expect = 8e-26
Identities = 218/290 (75%), Gaps = 20/290 (7%)
Strand=Plus/Plus
Query 525 TGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGC-GTATATTCGAAA 583
||| |||||||||||||||||||||||||||| |||||||||| || |||| || ||||
Sbjct 504 TGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGA-GCCGTATTTTTGAAA 562
Query 584 -GACACCCATACATGGCATTAGAGTTCCGAGCAAAGAACCAACAGT-TGAGGGCATCATG 641
| |||||| | || ||| ||| ||||| || |||||||||||| | ||||| | |||
Sbjct 563 AG-CACCCAGAGATTGCAGTAGGGTTCCAAGTAAAGAACCAACA-TCTGAGGAAAACAT- 619
Query 642 T-ATAAATGTCCTCCTCAGCCTAATCAAGACGTTGTGCCAGTCACTGCAAGATATTTCCA 700
| || ||| |||| ||| | |||| ||||| |||| || || || || || | || |
Sbjct 620 TCATGAATTTCCTGGTCAACGTAATTGAGACGCTGTGTCAATCTCTTCAGGAGCTCTCAA 679
Query 701 TTGATGACCTAG-GCCAAACAGAGCAA-GTACTAACAT-TCCTGCAAA-ATTCTGGATTT 756
||| || || | | || ||| || | ||| |||| | || ||| || | ||||||
Sbjct 680 ATGAAGATCTTGTGG-AAGTAGA-CATTGCACTGACATATT-TG-AAAGATGCGGGATTT 735
Query 757 AAGGTGGATTGGCTGGAGC-GTAAACTGGAGGAAGT-AAAGGAAAAGAAG 804
|||||||||||| | ||| | || ||||| |||| |||| ||||||||
Sbjct 736 AAGGTGGATTGGTTAGAGAAG-AAGCTGGACCAAGTGAAAG-AAAAGAAG 783
> Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994
Length=891
Score = 108 bits (58), Expect = 2e-22
Identities = 149/192 (78%), Gaps = 10/192 (5%)
Strand=Plus/Plus
Query 520 GTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTC 579
||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 439 GTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGCGTTTGTTT 498
Query 580 GAAAGACACCCATACATGGCATTAGAGTTCCGAGC-AAAGAA-CCAACAGTTGAGGGCAT 637
|||| ||||| | | || | || | |||| || | |||||| ||| | |||| | |
Sbjct 499 GAAAAACACCAAGATATTGTATCAAAGTTTCGT-CTAAAGAATCCAT-ATTTGAAGACGG 556
Query 638 CATGTATAAATGTCCTCCTCAGCCTAATC-AAGACGTTGTGCCAGTCAC-TGCAAGATAT 695
| || || ||||||||||| || | ||| || |||||||| || || | | ||||| |
Sbjct 557 CGTGCATGAATGTCCTCCTGAGTTTGATCCAA-ACGTTGTGTCAATCGCCT-CAAGA-AC 613
Query 696 T-TCCATTGATG 706
| |||| |||||
Sbjct 614 TCTCCAATGATG 625
> Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598
Length=828
Score = 99.0 bits (53), Expect = 1e-19
Identities = 88/105 (84%), Gaps = 2/105 (2%)
Strand=Plus/Plus
Query 523 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAGCGTATATTCG-A 581
|||||||||||||||||||||||||||||||||| |||||||||||| || | || |
Sbjct 466 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAGAGTCTTTTTATA 525
Query 582 AAGACACCCATACATGGCATTAGAGTTCCGAGCAAAGAACCAACA 626
||| |||||| |||| |||| | | ||||| ||||||||| |||
Sbjct 526 AAG-CACCCAGACATTGCATCACAATTCCGTCCAAAGAACCCACA 569
> Ahg480146 jgi|Araly1|480146|fgenesh2_kg.3__2847__AT2G05420.1
Length=927
Score = 67.6 bits (36), Expect = 3e-10
Identities = 36/36 (100%), Gaps = 0/36 (0%)
Strand=Plus/Plus
Query 520 GTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 555
||||||||||||||||||||||||||||||||||||
Sbjct 451 GTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAG 486
> Ahg336568 jgi|Araly1|336568|fgenesh1_pg.C_scaffold_1003133
Length=849
Score = 65.8 bits (35), Expect = 1e-09
Identities = 43/47 (91%), Gaps = 0/47 (0%)
Strand=Plus/Plus
Query 523 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAA 569
||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct 469 GATGTCAATGGGTTTCAAGTTCTTCCTTCTCAGGTAGACTCTGTGAA 515
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63572618905
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5