BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G45330.1
Length=2049
Score E
Sequences producing significant alignments: (Bits) Value
Ahg937203 jgi|Araly1|937203|scaffold_501394.1 2865 0.0
Ahg496169 jgi|Araly1|496169|fgenesh2_kg.8__1985__AT5G60320.1 1096 0.0
Ahg937205 jgi|Araly1|937205|scaffold_501396.1 538 6e-152
Ahg937206 jgi|Araly1|937206|scaffold_501397.1 479 4e-134
> Ahg937203 jgi|Araly1|937203|scaffold_501394.1
Length=2083
Score = 2865 bits (1551), Expect = 0.0
Identities = 1894/2059 (92%), Gaps = 26/2059 (1%)
Strand=Plus/Plus
Query 1 ATGGCTCAAAGATTGCATCTCCTTCTTCTTCTCTTCTTGATTTGCTTTGTTAATCTTATT 60
||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||| |
Sbjct 21 ATGGCTCAAAGATTGCA--TCC-TCTTCTTCTCTTCTTGATTTTCTTTGTTAATCTTA-T 76
Query 61 TC-TTTTTCAAGTCAACAAGACTTAAGTTTCATCTACAATGGCTTTAACCAAGACCAAAC 119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 77 TCGTTTTTCAAGTCAACAAGACTTAAGTTTCATCTACAATGGCTTTAACCAAGACCAAAC 136
Query 120 CAATCTAAACCTTGACGGTTCTGCAAAATTCCTACAAGATGGACTTTTGCAGCTAACAAA 179
|||| ||||||||||| ||||||||| | | ||||||||||||||||||||||| ||
Sbjct 137 TGATCTTAACCTTGACGGCTCTGCAAAAGT-C--CAAGATGGACTTTTGCAGCTAACCAA 193
Query 180 CGCCACGACTCAACAAAAGGGTCATGCTTTCTTCAACCGACCATTCGAATTCGGTTCTGC 239
|||||| ||||| ||| |||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 194 CGCCACAACTCAGCAACAGGGTCATGCTTTCTTCAACAGACCATTCGAATTCGGTTCAGC 253
Query 240 TTCATCTCAATCTCCTTCTTTCTCGACTCATTTCGTTTGCGCTCTTGTCCCTAAGCCAGG 299
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 254 GTCATCTCAATCTCTTTCTTTCTCAACTCATTTCGTTTGCGCTCTTGTCCCTAAGCCGGG 313
Query 300 AGTTGATGGTGGTCACGGGATTGCTTTTGTTCTATCATCTTCAATGGATCTTACACAAGC 359
||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 314 AGTTGTTGGTGGTCATGGGATTGCTTTTGTTCTATCATCTTCAATGGATTTTACACAAGC 373
Query 360 AGATCCAACTCAGTACTTAGGACTCTTCAACATCTCAACTAATGGTTCTCCTTCTTCTCA 419
|||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 374 AGATCCAACTCAATATTTAGGACTCTTCAACATCTCAACTAATGGATCTCCTTCTTCTCA 433
Query 420 CCTTTTAGCTATTGAGCTTGATACGGTCCAAAGCGCAGAGTTTGATGATAGAGACAAAAA 479
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 434 TGTTTTAGCTATTGAGCTTGATACGGTCCAAAGCGCAGAGTTTGATGATATCGACAAAAA 493
Query 480 CCATGTTGGTATAGACGA-AAACAGCCTCCAGTCTGTGGAATCTGCTTCAGCTTCTTATT 538
|||||| || |||||| | ||||||||||||||| || ||||||||| ||||||||||||
Sbjct 494 CCATGTCGGGATAGAC-ATAAACAGCCTCCAGTCCGTTGAATCTGCTCCAGCTTCTTATT 552
Query 539 ATTCAGATAAAGAAGGGAAGA-ACAAAAGCTTGAAACTCTTGAGTGGAGATCCTATTCAG 597
||||||| | ||||||||||| | |||||||||||||||||||||||| |||||||||||
Sbjct 553 ATTCAGACAGAGAAGGGAAGAGA-AAAAGCTTGAAACTCTTGAGTGGAAATCCTATTCAG 611
Query 598 GTATGGATTGATTATGAAGATACTCTACTCAATGTTACTTTAGCACCTCTTAAAACTCAG 657
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||
Sbjct 612 GTATGGATTGATTATGAAAATACTCTACTCAATGTTACTTTAGCACCTCTAAAAAATCAG 671
Query 658 AAGCCAAGTAAGCCTCTTTTGTCAATAACTATCAATCTCACCGCAATCTTCCCGGATCGA 717
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 672 AAGCCAAGTAAGCCTCTTTTGTCAAGAACCATCAATCTCACCGCAATCTTCCCGGATCGA 731
Query 718 AAAGCATTCATAGGGTTTTCGGCTGCGACTGGTTCATTGATTAGTTATCAATACATCTTA 777
||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 732 AAAGCTTTTGTCGGGTTTTCGGCTGCGACTGGTTCATTGATTAGTTATCAATACATCTTA 791
Query 778 GGATGGAGTTTCAGCAGAAACAGAGCATTACTACAGAGTCTTGACATCTCTAAACTTCCC 837
||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct 792 GGATGGAGTTTCAGCAGAAGCAGAGTGTTGTTACAGAGTCTTGACATCTCTAAACTTCCC 851
Query 838 ACGGTTCCACGTCCCAAGAAACCGGAGAAAACATCTCCTCTGCTTATTGTGCTATTGATT 897
| |||||| |||||||||||||| |||||||||||||||||||||||||| ||| || ||
Sbjct 852 AAGGTTCCTCGTCCCAAGAAACCTGAGAAAACATCTCCTCTGCTTATTGTTCTACTGGTT 911
Query 898 ATACTCGCTA-TCATAGTAATGGTGGTGGTAGGAGGATTTTATCTT-TACAGAAGAAAAA 955
|||||||| | |||||||||| | ||| |||||||||||||| || ||||||||||| |
Sbjct 912 ATACTCGC-ACTCATAGTAATCGCGGTTCTAGGAGGATTTTAT-TTCTACAGAAGAAAGA 969
Query 956 AGTATGCAGAAGTTAGAGAGCCATGGGAAAA-GCCATATGGTCCACTTCGTTATTCATAC 1014
||||||||||||||| ||||||||||||||| | ||||||||||||||||||||| ||
Sbjct 970 AGTATGCAGAAGTTAAAGAGCCATGGGAAAAAGA-ATATGGTCCACTTCGTTATTCCTAT 1028
Query 1015 AAATCTTTATATAAAGCAACAAGAGGGTTTAACAAAGATGGTCGTCTTGGAAGAGGAGGT 1074
|||||||||| |||||||||||||||||||||||||| ||||||||||||| ||| |||
Sbjct 1029 GAATCTTTATACAAAGCAACAAGAGGGTTTAACAAAGAAGGTCGTCTTGGAAAAGGCGGT 1088
Query 1075 TTTGGAGAAGTGTATAAAGGTACTCTGCCTATTCTAGGAGATATAGCTGTGAAGAGACTA 1134
||||||||||| |||||||| | ||||||| || ||||||||||||| ||||||||| ||
Sbjct 1089 TTTGGAGAAGTATATAAAGGAAGTCTGCCTCTTGTAGGAGATATAGCGGTGAAGAGATTA 1148
Query 1135 TCACACGATGCAGAGCAAGGGATGAAACAGTTTGTGGCTGAAGTTGTGACAATGGGAAGC 1194
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 TCACATGATGCAGAGCAAGGGATGAAACAGTTTGTGGCTGAAGTTGTGACAATGGGAAGT 1208
Query 1195 TTACAACACAAGAATCTGGTTCCTCTTCTCGGGTATTGTAGGCGAAAAGGCGAGTTATTG 1254
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1209 TTACAGCACAAGAATCTGGTTCCTCTTCTCGGGTATTGTAGGCGAAAAGGGGAGTTATTG 1268
Query 1255 CTGGTCTCTAAGTACATGGAAGGAGGTAGTGTTGATCAGTACTTATTTCACGGTGATAAA 1314
||||| ||||||||||||||||||||||| |||||||| ||||| |||||| | ||| ||
Sbjct 1269 CTGGTTTCTAAGTACATGGAAGGAGGTAGCGTTGATCAATACTTGTTTCACAGCGATCAA 1328
Query 1315 CCGCCTCTTTCTTGGTCTCAAAGAGTATCAATATTGAGAGATATCGCATCTGCGCTCTGT 1374
|||||||||||||||||||||||| | | |||||||||||||||||||||||||| |||
Sbjct 1329 CCGCCTCTTTCTTGGTCTCAAAGACTCGCGATATTGAGAGATATCGCATCTGCGCTATGT 1388
Query 1375 TACTTGCATACAGGAGCTAGTCAAGTTGTTTTACACCGAGATATCAAAGCTTCTAATGTC 1434
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1389 TACTTGCATACAGGAGCCAGTCAAGTTGTTCTACACCGAGATATCAAAGCTTCTAATATC 1448
Query 1435 ATGTTAAATGGAAA-TCTCCAAGGGTTTTTAGGAGATTTTGGAATGGCTAGGTTTGATGA 1493
|||||||||| ||| | | ||||| || |||||||||||||| ||||||| |||||||||
Sbjct 1449 ATGTTAAATG-AAACTTTACAAGGCTTCTTAGGAGATTTTGGGATGGCTAAGTTTGATGA 1507
Query 1494 TCATGG-GTCTAACCTCTCTGCAACTGCAGCTGTAGGAACCATAGGCTACATGGCGCTCG 1552
|||||| | ||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1508 TCATGGAG-CTAACCTCTCTGCCACAGCAGCTGTAGGAACCATAGGCTACATGGCGCTCG 1566
Query 1553 AGCTAACGTCAACAGGAACTTCCACTAGAACAGATGTGTATGCATTTGGTGCATTCATGC 1612
||||||| ||||||||||||| || ||||| ||||||||||||||||||||||| ||||
Sbjct 1567 AGCTAACAACAACAGGAACTTCAACAAGAACCGATGTGTATGCATTTGGTGCATTTATGC 1626
Query 1613 TTGAAGTAACATGTGGGAGAAGACCATTTGATCCTGCGATGCCGGTTGAGAAACGACATT 1672
||||||||||||||||||| |||||||||||||| | |||||||| |||||||||||||
Sbjct 1627 TTGAAGTAACATGTGGGAGGAGACCATTTGATCCCGAAATGCCGGTCGAGAAACGACATT 1686
Query 1673 TGGTCAAGTGGGTTTGTGAATGCT-GGAGAGAAGGTTCTCTAGTCAATGCTGTGGATACA 1731
| ||||||||||||||||||| || ||||| |||||||||||||||||||| | ||||||
Sbjct 1687 TAGTCAAGTGGGTTTGTGAAT-CTTGGAGAAAAGGTTCTCTAGTCAATGCTATAGATACA 1745
Query 1732 AGACTGAGAGGTAAATTTGTACCCGGGGAAGTTGAAATGGTTCTGAAGCTAGGGTTGCTT 1791
||| ||||||||||||| ||||||| |||||| |||||||||||||| || ||||| ||
Sbjct 1746 AGATTGAGAGGTAAATTCGTACCCGAGGAAGTCGAAATGGTTCTGAAACTCGGGTTACTC 1805
Query 1792 TGTACAAGCATTATACCAGAAGCAAGACCTAACATGGAACAAGTGGTCCAATACATAAAC 1851
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1806 TGTACAAGCATTATACCAGAAGCAAGACCTAACATGGAACAAGTGGTGCAATACATAAAC 1865
Query 1852 AGACACCAAAGATTGCCTGAGTTCTCTCCAAATACTCCCGGGATCGGAGTTTCAACTCCG 1911
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1866 AGACACCAAAGATTGCCTGAGTTCTCTCCAGATACTCCCGGGATCGGAGTTTCAACTCCG 1925
Query 1912 GTGTTAATGGGTTTACCTTCCTTGGCAATT-ACTTCTAGTTCAGTGACTTCATCAGTTTC 1970
||||||||||| ||||||| |||||| || ||||| ||||||||| | |||||||| ||
Sbjct 1926 GTGTTAATGGGAGTACCTTCGTTGGCA-TTCACTTCCAGTTCAGTGTCCTCATCAGTATC 1984
Query 1971 AGGACCATCAGCCTCTCCTTCCTCTGCTAACAACTCAATGTTCATTTCTCACACCATTAT 2030
||||||||||| ||||||||||||||| || ||||||||||||||||||||||| || ||
Sbjct 1985 AGGACCATCAGTCTCTCCTTCCTCTGCCAATAACTCAATGTTCATTTCTCACACAATCAT 2044
Query 2031 ATATGGTGATGGAAGATGA 2049
|||||||||||||||||||
Sbjct 2045 ATATGGTGATGGAAGATGA 2063
> Ahg496169 jgi|Araly1|496169|fgenesh2_kg.8__1985__AT5G60320.1
Length=1995
Score = 1096 bits (593), Expect = 0.0
Identities = 1496/1919 (78%), Gaps = 114/1919 (6%)
Strand=Plus/Plus
Query 53 ATCTTATTT-CTTTTTCAAGTCAACAAGACTTAA----GTTTCATCTACAATGGCTTTAA 107
|||| |||| ||| || |||||||||||| || ||||| ||||||||||||||
Sbjct 47 ATCTGATTTCCTTGTT-AAGTCAACAAGA-AGAAGCCGGTTTCGTCTACAATGGCTTTGG 104
Query 108 CCAAGAC-CAAACCAATCTAAACCTTGACGGTTCTGC-AAAATTC-C-TACAAGATGGAC 163
||||| | |||| || | | || || || |||| ||||||| | | | |||||||
Sbjct 105 CCAAG-CTGAAACTGATTTTCATCTAGATGGAGCTGCAAAAATTCTCTTCCCAGATGGA- 162
Query 164 TT-TTGCAGCTAACAAACGCCACGACTCAACAAAAGGGTCATGCTTTCTTCAACCGACCA 222
|| ||||||||||| |||||| || | || |||| |||||||||||||||||| ||||
Sbjct 163 TTGTTGCAGCTAACTAACGCCTCGTCGCAGCAAATGGGTCATGCTTTCTTCAAGAAACCA 222
Query 223 TTCGAA-TTCGGTTCTGCTTC-ATCTCAATCTCCTTCTTTCTCGACTCATTTCGTTTGCG 280
||| || |||| ||| ||| || || || | ||||||||||||||||| || || |
Sbjct 223 TTC-AAGTTCGATTC--ATTCGATAGGAAACT-C-TCTTTCTCGACTCATTTTGTGTGTG 277
Query 281 CTCTTGTCCCTAAGCCAGGAGTTGATGGTGGTCACGGGATTGCTTTTGTTCTATCATCTT 340
| || || ||||| || |||| |||||||| || || || || |||||| |||| ||||
Sbjct 278 CACTGGTTCCTAAACCTGGAGCAGATGGTGGCCATGGAATCGCCTTTGTTGTATCTTCTT 337
Query 341 CAATGGATCTT-ACACAAGCAGATCCAACTCAGTACTTAGGACTCTTCAACATCTCAACT 399
| || ||| || |||||||||||||||||||||||||| ||| | ||||||||||||||
Sbjct 338 CCATAGAT-TTCACACAAGCAGATCCAACTCAGTACTTGGGAGTTTTCAACATCTCAACA 396
Query 400 AATGGTTCTCCTTCTTCTCACCTTTTAGCTATTGAGCTTGATACGGTCCAAAGCGCAGAG 459
||||| |||||||||||||| ||| ||||||||||||| ||||| || | |||||||||
Sbjct 397 AATGGATCTCCTTCTTCTCAGCTTCTAGCTATTGAGCTCGATACTGTTGAGAGCGCAGAG 456
Query 460 TTTGATGATAGAGACAAAAACCATGTTGGTATAGACGA-AAACAGCCTCCAGTCTGTGGA 518
|||||||||| ||||| || ||||| ||||||||| | |||||||| | ||||| ||
Sbjct 457 TTTGATGATATCGACAAGAATCATGTCGGTATAGAC-ATCAACAGCCTGAATTCTGTAGA 515
Query 519 ATCTGCTTCAGCTTCTTA-TTATTCAGATA-AAGAAGGGAAGAA-CAAAAGCTTGAAA-C 574
||||||||||||||||| || |||||| | | |||||||||| | ||||| | ||| |
Sbjct 516 GTCTGCTTCAGCTTCTTACTT-TTCAGACACCA-AAGGGAAGAATC-AAAGCAT-AAAGC 571
Query 575 TCTTGAGTGGAGATCCTATT-CAGGTATGGATTGATTATGAA-GATACTCTACTCAATGT 632
|||| |||||||| ||| || || || ||| | ||||||||| || ||| |||| |||||
Sbjct 572 TCTTAAGTGGAGACCCT-TTACAAGTCTGGGTGGATTATGAAGGA-ACTTTACTAAATGT 629
Query 633 TACTTTAGCACCTCTTAAAAC-T-CAGAAGCCAAGTAAGCCTCTTTTGTCAATAACTATC 690
|| | || |||| | || | | ||||| |||| | |||||| |||||| | | |||
Sbjct 630 CACAGTGGCTCCTC-T-AAGCATCCAGAAACCAAACCATCCTCTTCTGTCAAGATCCATC 687
Query 691 AATCTCACCGCAATCTTCCCGGATCGAAAAGC-ATTCATAGGGTTTTCGGC-TGCGACTG 748
|||||||| | ||||||||||||||||| | | || | || || || || | | || |
Sbjct 688 AATCTCACTGAAATCTTCCCGGATCGAAGA-CTGTTTTTCGGATTCTCTGCAT-CAACAG 745
Query 749 GTTCATTGA-TTAGTTATCAATACATCTTAGGATGGAGTTTCAGCAGAAACAGAGCATTA 807
| || || | | ||||| ||||| |||||||||||||||||||||||||||||| ||
Sbjct 746 GATCGTT-AGTCAGTTACCAATATATCTTAGGATGGAGTTTCAGCAGAAACAGAATGTTG 804
Query 808 CTACAGAGTCTTGACATCTCTAAACTTCC-CACGGTTCCACGTCCCA-AG--AAACCGGA 863
| ||||| |||||| |||| |||||||| || | |||| | ||| | || ||| | |
Sbjct 805 TTGCAGAGACTTGACTTCTCAAAACTTCCTCA-GATTCCTCATCCAAGAGCCAAAAAGAA 863
Query 864 GAAAACATCTCCTCTGCTTATTG-TGCTA-T--TGATTATACTCGCTA-TCATAGTAATG 918
| |||||||||| |||||||| | | ||| | || ||| | | || | ||||| | ||
Sbjct 864 GCAAACATCTCCGCTGCTTATCGCT-CTACTCGTG-TTA-A-TAGC-ACTCATAATGTTG 918
Query 919 GTGGTGGTAGGAGGATTTTATCTT-TACAGAAGAAAAAAGTATGCAGAAGTTAGAGA-GC 976
| || | |||||| |||| ||| ||||| |||||||||||||||||||| ||||| ||
Sbjct 919 GCCGTTCTTGGAGGAGTTTA-CTTATACAGGAGAAAAAAGTATGCAGAAGTCAGAGAAGC 977
Query 977 CATGGGAAAA-GCCATATGGTCCACTTCG-TTATTCATACAAATCTTTATATAAAGCAAC 1034
||||||||| | ||| ||||| | ||| || ||| || |||||| |||| ||||||||
Sbjct 978 -ATGGGAAAAAGA-ATACGGTCCGCATCGGTT-TTCTTATAAATCTCTATACAAAGCAAC 1034
Query 1035 AAGAGGGTTTAACAAAGATGGTCGTCTT-GGAAGAGGAGGTTTTGGAGAAGTGTATAAAG 1093
|| ||||||| |||||||||||||| || |||| ||| |||||||||||||| || | ||
Sbjct 1035 AAAAGGGTTTGACAAAGATGGTCGT-TTAGGAAAAGGCGGTTTTGGAGAAGTCTACAGAG 1093
Query 1094 GTACTCTGCCTATTC-TAGGAGATATAGCTGTGAAGAGACTAT-CACACGATGCAGAGCA 1151
| | ||| || | | ||||||||||| || |||||| | | | ||||||||| ||||
Sbjct 1094 GAAATCTACCCCG-CGTTGGAGATATAGCGGTAAAGAGAGTGTGC-CACGATGCAAAGCA 1151
Query 1152 AGGGATGAAACAGTTTGTGGCTGAAGTTGTGACAATGGGAAGCTTACAA-CACAAGAATC 1210
||| ||||||||||||||||||||||| ||||| |||||||| ||| || ||| ||||
Sbjct 1152 AGGCATGAAACAGTTTGTGGCTGAAGTAGTGACTATGGGAAGTTTA-AAGCACCGGAATT 1210
Query 1211 TGGTTCCTCTTCTCGGGTATTGTAGGCGAAAAGGCGAG-TTATTGCTGGTCT-CTAAGTA 1268
||||||||||||||||||| || ||| | ||||| || || || ||||||| | | |||
Sbjct 1211 TGGTTCCTCTTCTCGGGTACTGCAGGAGGAAAGGAGAACTTCTT-CTGGTCTACGA-GTA 1268
Query 1269 CATG-G-AAGGAGGTAGTGTTGATCAGTACTTATTTCACGGTGATAAA-CC-GCCTCTTT 1324
||| | || | | ||| ||||||| ||||| |||||| | | ||| || || |||||
Sbjct 1269 TATGTGTAATG-GC-AGTCTTGATCAATACTTGTTTCACAGAAA-AAATCCAGC-TCTTT 1324
Query 1325 CTTGGTCTCAAAGAG-TA-TCAATATTGAGAGATATCGCATCTGCGCTCTGTTACTTGCA 1382
| ||| | ||||| | || ||| | |||| |||||| || ||||| ||| ||||| ||||
Sbjct 1325 CATGGCCGCAAAG-GCTAGTCATT-TTGAAAGATATAGCCTCTGCTCTCAGTTACCTGCA 1382
Query 1383 TACAGGAGCTAGTCAAGTTGTTTTACACCGAGATATCAAAGCTTCTAATGTCATGTTAAA 1442
||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| |
Sbjct 1383 TACAGGAGCTAATCAAGTTGTATTACACCGAGATATAAAAGCTTCTAATGTCATGTTAGA 1442
Query 1443 TGGAAATCTCCAAGGGTTT-TTAGGAGATTTTGGAATGGCTAGGTTTGATGATCATGG-G 1500
| ||| || || || |||||||||||||||||||| || ||||| ||| |||| |
Sbjct 1443 TTCTAATTTC-AATGGAAGATTAGGAGATTTTGGAATGGCGAGATTTGAAGATTATGGAG 1501
Query 1501 TCTAACCT-CTCTGCAACTGCAGCTGTAGGAACCATAGGCTACATGGCGC-TCGAGCTAA 1558
|| | | | ||||||| |||||||||||||| || || |||||||| | | |||||||
Sbjct 1502 A-TAGCTTAC-CTGCAACAGCAGCTGTAGGAACAATGGGTTACATGGCACCT-GAGCTAA 1558
Query 1559 CGTCAACAGGAA-CTTCCACTAGAACAGATGTGTATGCATTTGGTGCATTCATGCTTGAA 1617
| ||| | || ||| || ||||||||||| |||||||||||||| ||||||||||||
Sbjct 1559 CAACAAT-GAAAACTTGTACAAGAACAGATGTTTATGCATTTGGTGCTTTCATGCTTGAA 1617
Query 1618 GTAACATGTGGGA-GAAGACCATTTGATCCTGCGATGCCGGTTGAGAAACGACATTTGGT 1676
|||| ||||| | | ||||| || ||||| ||| | | ||||||||| |||||| |
Sbjct 1618 GTAAGTTGTGG-ACGGAGACCGTTAGATCCCAAGATTTCAGCTGAGAAACGGCATTTGAT 1676
Query 1677 CAAGTGGGTTTGTGAATGCTGGAGAGAAGG-TTCTCTAGTCAATGCTGTGGATACAAGAC 1735
||| ||||||||||| ||||||||| | || |||||| || ||||| | |||| ||||
Sbjct 1677 CAAATGGGTTTGTGATTGCTGGAGA-AGGGATTCTCTGGTTGATGCTATAGATAGAAGAT 1735
Query 1736 TGAGAGGTAAATT-TGTACCCGGGGAAGTTGAAATGGTTCTGAAGCTAGGGTTGCTTTGT 1794
|| ||||||||| | | | | ||||| |||||| ||||| || || || ||||||||
Sbjct 1736 TGGGAGGTAAATACTC-AGCAGAGGAAGCTGAAATTGTTCTAAAACTTGGATTGCTTTGC 1794
Query 1795 ACAAGCATTATACCAGAAGCAAGACCTAACATGGAACAAGTGGTCCAATACATAAACAG- 1853
|||| ||| | ||||| | ||||| | ||||||||||||||| || |||||| || |
Sbjct 1795 ACAAACATGGTTGCAGAATCTAGACCCACCATGGAACAAGTGGTACAGTACATATACTGG 1854
Query 1854 ACACCAAAGATTGCCTGAGTTCTCTCCAAA-TACTCCCGGGATCGGAGTTTCAACTCCG 1911
| | | ||||||| | ||||| ||| | | |||| || || |||||||| |||||
Sbjct 1855 A-ATCTTCCATTGCCTAATTTCTCACCAGAGT-CTCCAGGAATTGGAGTTTCTGCTCCG 1911
> Ahg937205 jgi|Araly1|937205|scaffold_501396.1
Length=2037
Score = 538 bits (291), Expect = 6e-152
Identities = 1305/1773 (74%), Gaps = 155/1773 (9%)
Strand=Plus/Plus
Query 149 TCCTACAAGATGGACTTTTGCAGCTAACAAACGCCAC-GACTCAACAAAAGGGTCATGCT 207
|||||| ||||||||||||||| | ||||| | || || | |||| ||||||||||
Sbjct 154 TCCTACCTGATGGACTTTTGCAGTTGACAAATACTACAGAGT-TGCAAATGGGTCATGCT 212
Query 208 TTCTTCAACCG-A-CCATTCGAATTCGGTTC-TGCTTCATCTCAATCTCCTTCTTTCTCG 264
|||||||| | | ||||| || || | | | | ||||| || || | ||| ||||
Sbjct 213 TTCTTCAA--GAAGCCATTTGATTTTGATCCAT-CTTCA--TC-AT-T--TTCGTTCTAT 263
Query 265 ACTCATTTCGTTTGCGCTCT--TGTC-CCTAAGCCAGGAGTTGATGGTGGTCACGGGATT 321
|| ||||| || ||||| || || | |||||| |||| ||||||||| || || ||
Sbjct 264 ACACATTTTGTGTGCGCGCTGGTGCCTCCTAAGTTGGGAGCTGATGGTGGCCATGGTATC 323
Query 322 GCTTTTGTTCTATCAT-CTTCAATGGATCT-TACACAAGCAGATC-CAACTCAGTACTTA 378
| ||||||| |||| | |||| |||||||| | | || ||| | | |||||||||||||
Sbjct 324 GTTTTTGTTGTATC-TCCTTCCATGGATCTCT-CTCATGCATA-CGCAACTCAGTACTTG 380
Query 379 GGACTCTTCAAC-ATCTCAACTAATGGTTC-TCCTTCTTCTCACCTTTTAGCTATTGAGC 436
|| |||||| | | || ||| ||||| | ||| ||||| || || ||||||||||||
Sbjct 381 GGGGTCTTCAGCAACCT-AACAAATGGGACTTCC-TCTTCACATCTACTAGCTATTGAGC 438
Query 437 TTGATACGGTCCAAAG-C-GCAGAGTTTGATGA-TAGAGACAAAAAC-CATGTTGGTATA 492
| ||||| || ||| | | ||||||| |||| | | || ||| | |||||||||||
Sbjct 439 TCGATACCGT--TAAGACAGTAGAGTTTAATGAGTTG-GA-AAAGCCTCATGTTGGTATT 494
Query 493 GACGAAAACAGCCTCCA-GTCTGTGGAATCTGCTTCAG-CTTCTTA-TTATTCAGATAAA 549
|| ||||||| | | ||||| |||||||| || | | ||||| || ||| |
Sbjct 495 GATTTGAACAGCC-CAATATCTGTTGAATCTGC-TCTGCCATCTTACTT-TTCTGGCGCC 551
Query 550 GAAGGGAAGAACAAAAGC-TTGAAAC-TCTTGAGTGGAGATCCTATTCAGGTATGGATTG 607
||||||||| | |||| | | | | || ||||||| || |||| ||||| ||| | |
Sbjct 552 TCAGGGAAGAATATAAGCATAG-ATCTTC-TGAGTGGGGAGGCTATCCAGGTTTGGGTGG 609
Query 608 ATTATGA-AGATAC-TCTACTCAATGTTACTTTAGCACCTCT-TA-AAACT-CAGAAGCC 662
|||| || | | | | | || |||||||| | || || || || ||| | ||||||||
Sbjct 610 ATTACGATGGCT-CGT-TGCTAAATGTTACACTGGC-CC-CTATAGAAA-TCCAGAAGCC 664
Query 663 AAGTAAGCCTCTTTTGTCAATAACTATCAATCTCACCGCA-ATCTTCCCGGATCGAAAAG 721
|| | |||||||| | |||| | | |||||||| | | | || || | || ||| |
Sbjct 665 AAATCAGCCTCTTATATCAAGAGCCATCAATCTTTCAG-AGATTTTTCAAGA--GAAGA- 720
Query 722 CAT-TCATAGGGTTTTCGGC-TGCGAC-TGG-TTCATTGATTAGTTATCAATACAT-CTT 776
|| | | ||||| || | | | || || || || ||||| | || || || |||
Sbjct 721 TATAT-GTTGGGTTCTCTTCAT-CAACAGGGAATC-TT-CTTAGTAACCATTATATACTT 776
Query 777 AGGATGGAGTTTCAGCAGAAACAGAGCATTACTACAGAGTCTTGACATCTCTAAACTTCC 836
|| |||||||| || |||| || || | | |||||| || ||| ||||||||| |||
Sbjct 777 -GGGTGGAGTTTTAGTAGAAGCAAAGAACAATTACAGAACCTGGACCTCTCTAAAC-TCC 834
Query 837 CAC-GGTTCCACGTCCCA-AGA--AACCGGAGAAAACATCTCCTCTGCTTATT-G--TGC 889
| | | |||| | ||| | ||| || ||||| |||||| || |||||| | ||
Sbjct 835 CTCAGATTCCTCTTCCTAGAGAGGAAAAAAAGAAATTATCTCCACTACTTATTGGTTTGG 894
Query 890 T-ATTGATTA-TACTCGCTATCATAGTAATGGTGGTGGTAGGAGGATTTTA-TCTTTACA 946
| | | ||| || | | | || | || || |||| | |||||| | || | || ||
Sbjct 895 TCA-T-CTTATTAGT-GAT-TCCT-GTGCTGATGGTTCTTGGAGGAATGTATTGGTT-CA 948
Query 947 GAAGAAA-AAAGTATGCAGAAGTTAGAGAGCCATGGGAAAAGCCATATGGTCCACTTCG- 1004
||||||| ||| ||||||||||| | ||| ||||| ||| ||| || |||| ||
Sbjct 949 GAAGAAAGAAA-TATGCAGAAGTAAAAGAATGGTGGGAGAAGGAATACGGCCCACACCGA 1007
Query 1005 TTATTCATACAAATCTTTATATAAAGCAACAAGA-GGGTTTAACAAAGATGGTCGTCTT- 1062
|| || || || ||| | || |||||||||| | |||||| |||||| ||||| ||
Sbjct 1008 TT-CTCCTATAAGTCTCTGTACAAAGCAACAA-ATGGGTTTCGTAAAGATTGTCGTGTTG 1065
Query 1063 GGAAGAGGAGGTTTTGGAGAAGTGTATAAAGGTACTCTG-CC-TATTCTAGGAGATATAG 1120
|||| ||| || ||||||||||| || ||||| |||||| || | | ||| ||||||
Sbjct 1066 GGAA-AGGTGGGTTTGGAGAAGTCTACAAAGGAACTCTGCCCGGAGGC-AGG-CATATAG 1122
Query 1121 CTGTGAAGAGACTATCACACGATGCAGAGCAAGGGATGAAACAGTTTGTGGCTGAAGTTG 1180
||||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct 1123 CTGTGAAAAGACTATCCCATGATGCAGAGCAAGGGATGAAACAGTTTGTGGCAGAAGTTG 1182
Query 1181 TGACAATGGGAAGCTTACAACA-CAAGAATCT-GGTTCCTCTTCTCGGGTATTGTAGGCG 1238
| || ||||||| |||||||| | ||| || ||||||||||||||||||||| ||| |
Sbjct 1183 TAACCATGGGAAATTTACAACATCG-GAA-CTTGGTTCCTCTTCTCGGGTATTGCAGGAG 1240
Query 1239 AAAAGGCGAGTTA-TTGCTGGTCTCTAAGTACATGG--AAGGAGGTAGTGTTGATCAGTA 1295
|||| | ||||| || ||||||||| |||||||| || | | |||| |||| |||||
Sbjct 1241 AAAATGTGAGTTGCTT-CTGGTCTCTGAGTACATGCCCAACG-G-TAGTCTTGACCAGTA 1297
Query 1296 CTTATTTCACGGTGATAAACCGCCTCT--TTCTTGGTCTCAAAG-AGTATCAATA-TTGA 1351
||| ||||| | || ||||| | ||| ||| |||| |||||| | | || || || |
Sbjct 1298 CTTGTTTCATGACGA-AAACC-CATCTCCTTCATGGTTTCAAAGGATT-TCTATTCTTAA 1354
Query 1352 GAGATATCGCATCTGCGCTCT--GTTACTTGCATACAGGAGCTA-GTCAAGTTGTTTTAC 1408
| || || ||||| | ||||| ||||| ||||||||||| | | | ||||||||||| |
Sbjct 1355 G-GACATTGCATC-G-GCTCTTAGTTACCTGCATACAGGAACCAAG-CAAGTTGTTTTGC 1410
Query 1409 ACCGAGATATCAAAGCTTCTAATGTCATGTTAAATG--GAAATCTCCAA-GGGTTTTTAG 1465
| || ||||| |||||||| || ||||||||| || || | || || ||| ||||
Sbjct 1411 ATCGGGATATAAAAGCTTCGAACGTCATGTTAGATTCCGAG-T-TC-AACGGGAGGTTAG 1467
Query 1466 GAGATTTTGGAATGGCTAGGTTTGATGATCATGG-GTCTAACCTCTCTGCAACTGCAGCT 1524
| |||||||| ||||| | |||| | || | ||| | | ||| | ||||||||||| |||
Sbjct 1468 GTGATTTTGGCATGGCCAAGTTTCACGACCGTGGAGCC-AACTTATCTGCAACTGCCGCT 1526
Query 1525 GTAGGAACCATAGGCTACATGGCGC-TCGAGCTAACGTCAACAGGAACTTCCACT-AGAA 1582
|| ||||||||||| |||||||| | | ||||||| ||| ||||| || | | | ||
Sbjct 1527 GTGGGAACCATAGGTTACATGGCACCT-GAGCTAATAACAATGGGAACATCTA-TGAAAA 1584
Query 1583 CAGATGTGTATGCATTTGGTGCATTCATGCTTGAAGTAACATGTGGGAGAAGACCATTTG 1642
| ||||||||||| |||||||| ||| | ||||||||||| ||||| ||| |||| | ||
Sbjct 1585 CCGATGTGTATGCCTTTGGTGCTTTCCTTCTTGAAGTAACTTGTGGAAGACGACC-TGTG 1643
Query 1643 -ATCCTGCGATGCCGGTTGAGAAA-CGACATTTGGTCAAGTGGGTTTGTGAATGCTGGAG 1700
| |||| | | || |||| |||| | | |||||||||||||||| | ||||||||||
Sbjct 1644 GAACCTGAGCTACCAGTTG-GAAAGCAATATTTGGTCAAGTGGGTCTACGAATGCTGGAA 1702
Query 1701 AGAAGG-TTCTCTAGTCAATG-CT-GTGGATACAAGACTGAGAGGTA-AATT-TGTACCC 1755
| | || || | || || | | | | | || ||||| || |||| | || | | |||||
Sbjct 1703 ACA-GGCTTGTTTACTCGA-GACCAGAG-ATCCAAGATTGGGAGG-AGAACTCT-TACCC 1757
Query 1756 GGGGAAGTTGAAATGGTTCTGAAGCTAGGGTTGCTTTGTACAA--GCATTATACCAGAAG 1813
| |||||| || ||||||||||| || ||||| || || |||| || | || ||||||
Sbjct 1758 GTGGAAGTCGAGATGGTTCTGAAACTTGGGTTACTCTGCACAAATGC-T-ATGCCAGAAT 1815
Query 1814 CAAGACCTAACA-TGGAACAAGTGGTCCAATAC 1845
|||| ||| || ||||||||||||| ||||||
Sbjct 1816 CAAGGCCTG-CAATGGAACAAGTGGTGCAATAC 1847
> Ahg937206 jgi|Araly1|937206|scaffold_501397.1
Length=2046
Score = 479 bits (259), Expect = 4e-134
Identities = 732/953 (77%), Gaps = 62/953 (7%)
Strand=Plus/Plus
Query 928 GGAGGATTTTATCT-TTACAGAAGAAAAAAGTATGCAGAAGTTAGAGAGCCATGGGAAAA 986
|||||| |||| || ||||||||||| |||||||||||||| ||||| | ||||||||
Sbjct 954 GGAGGAGTTTA-CTGGTACAGAAGAAAGAAGTATGCAGAAGTAAGAGAATCGTGGGAAAA 1012
Query 987 GCCATATGGTCCACTTCGTTATTCATACAAATCTTTATATAAAGCAACAAGA-GGGTTTA 1045
| ||| || |||| || ||||| ||||| ||| | || |||||||||| | ||||||
Sbjct 1013 GGAATACGGCCCACACCGATATTCCTACAAGTCTCTGTACAAAGCAACAA-ATGGGTTTG 1071
Query 1046 ACAAAGATGGTCGTCTT-GGAAGAGGAGGTTTTGGAGAAGTGTATAAAGGTACTCTGCCT 1104
|||||||| || | || |||| ||| || |||||| |||| || ||||| ||||||||
Sbjct 1072 TCAAAGATGCTCTTGTTGGGAA-AGGTGGGTTTGGAAAAGTTTACAAAGGAACTCTGCC- 1129
Query 1105 ATTCTAGG--AG-ATATAGCTGTGAAGAGACTATCACACGATGCAGAGCAAGGGATGAAA 1161
||| ||| || ||||||||||||| |||||||| || |||||||||||||||||||||
Sbjct 1130 -TTC-AGGCAAGCATATAGCTGTGAAAAGACTATCCCATGATGCAGAGCAAGGGATGAAA 1187
Query 1162 CAGTTTGTGGCTGAAGTTGTGACAATGGGAAGCTTACAACA-CAAGAATCT-GGTTCCTC 1219
||||||||||| ||||| || || ||||||| |||||||| | || || ||||||||
Sbjct 1188 CAGTTTGTGGCAGAAGTCGTAACGATGGGAAATTTACAACATCGC-AA-CTTGGTTCCTC 1245
Query 1220 TTCTCGGGTATTGTAGGCGAAAAGGCGAGTTATTGCTGGTCTCTAAGTACATGG--AAGG 1277
|||| ||||||||||| ||||||| ||||| | ||||||||| |||||||| || |
Sbjct 1246 TTCTTGGGTATTGTAGAAGAAAAGGTGAGTTGCTACTGGTCTCTGAGTACATGCCCAACG 1305
Query 1278 AGGTAGTGTTGATCAGTACTTATTTCACGGTGAT-AAA-CCGC--CTCTTTCTTGGTCT- 1332
| |||| |||| |||||||| ||| | | | ||| || | ||||||| |||| |
Sbjct 1306 -G-TAGTCTTGACCAGTACTTGTTTT--G-TAACCAAAACC-CATCTCTTTCATGGT-TG 1358
Query 1333 CAAAGAGTATCAATA-TTGAGAGATATCGCATCTGCGCTCTGTTACTTGCATACAGGAGC 1391
|||||| | || || || || || ||||| || || ||| |||| |||||||||||||
Sbjct 1359 CAAAGAATTTCTATTCTTAAG-GACATCGCCTCGGCTCTCAATTACCTGCATACAGGAGC 1417
Query 1392 TAGTCAAGTTGTTTTACACCGAGATATCAAAGCTTCTAATGTCATGTTAAATG--GAAAT 1449
| || || |||||| ||||| ||||| ||||||||||||||||||||| || || |
Sbjct 1418 CAATCCAGCTGTTTTGCACCGGGATATAAAAGCTTCTAATGTCATGTTAGATTCTGAG-T 1476
Query 1450 CTCCAAGGGTTT-TTAGGAGATTTTGGAATGGCTAGGTTTGATGATCATGG-GTCTAACC 1507
| || || |||||||||||||| ||||| | |||| | || | | | ||||
Sbjct 1477 AT--AATGGAAGATTAGGAGATTTTGGTATGGCCAAGTTTCAGGACCCCCAAG-CGAACC 1533
Query 1508 TCTCTGCAACTGCAGCTGTAGGAACCATAGGCTACATGGCGC-TCGAGCTAACGTCAACA 1566
| |||||||| || ||||| ||||||||||| |||||||| | | ||||||| |||
Sbjct 1534 TATCTGCAACAGCTGCTGTGGGAACCATAGGTTACATGGCACCT-GAGCTAATAAGAACT 1592
Query 1567 GGAACTTCCACTAGAA-CAGATGTGTATGCATTTGGTGCATTCATGCTTGAAGTAACATG 1625
|||||||| | |||| | ||||||||||| ||||||| ||| | | ||||||||| ||
Sbjct 1593 GGAACTTCTAA-AGAAACTGATGTGTATGCCTTTGGTGTTTTCCTTCATGAAGTAACTTG 1651
Query 1626 TGGGAGAAGACCATTTGATCCTGCGATGCCGGTTG-AGAAACGACAT-T-TGGTCAAGTG 1682
||| || |||| ||||| || | | |||| | | | ||| || || | ||||||||||
Sbjct 1652 TGGAAGGCGACCTTTTGAACCAGAGTTGCCAGC-GCA-AAA-GAAATATCTGGTCAAGTG 1708
Query 1683 GGTTTGTGAATGCTGGAGAGAAGGTTCTCTAGTCAATG-CT-GTGGATACAAGACTGAGA 1740
|||||| |||||||||| | | | |||| || |||| | | | | || ||| | || ||
Sbjct 1709 GGTTTGCGAATGCTGGAAACATGCTTCTTTACTCAA-GACCAGAG-ATCCAAAATTGGGA 1766
Query 1741 GGTA-AATTTGTACCCGGGGAAGTTGAAATGGTTCTGAAGCTAGGGTTGCTTTGTACAA- 1798
| | |||| ||| ||| ||||| ||||||||| |||| || |||||||| || ||||
Sbjct 1767 AG-AGAATTCGTATCCGAAGAAGTCGAAATGGTTTTGAAACTTGGGTTGCTCTGCACAAA 1825
Query 1799 -GCAT-TATACCAGAAGCAAGACCTAACATGGAACAAGTGGTCCAATACATAA 1849
| || | | |||||| |||| ||| |||||| ||||||| | |||||| |||
Sbjct 1826 TG-ATGT-T-CCAGAATCAAGGCCTGACATGGGACAAGTGATGCAATACCTAA 1875
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77056565635
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5