BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G45410.1 Length=2115 Score E Sequences producing significant alignments: (Bits) Value Ahg937205 jgi|Araly1|937205|scaffold_501396.1 3121 0.0 Ahg937206 jgi|Araly1|937206|scaffold_501397.1 1949 0.0 Ahg937203 jgi|Araly1|937203|scaffold_501394.1 612 4e-174 > Ahg937205 jgi|Araly1|937205|scaffold_501396.1 Length=2037 Score = 3121 bits (1690), Expect = 0.0 Identities = 1909/2018 (95%), Gaps = 2/2018 (0%) Strand=Plus/Plus Query 1 ATGGCTTGTAGACTATATTTGGCTTTGATCTTCTCTTGCGTTTATCTGATTTGCCTGTCA 60 |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct 21 ATGGCTTGCAGACTATATCTGGCTTTGATCTTCTCTTGCGTTTATCTGATTTTCCTGTCA 80 Query 61 AGTCAACAAGAAACCGGGTTTGTCTACAATGGCTTCGAGCAAGCAGATCTTTTTATTGAT 120 ||||||||||||||||||||||||||||||||||| || || |||||||||||||| ||| Sbjct 81 AGTCAACAAGAAACCGGGTTTGTCTACAATGGCTTTGATCAGGCAGATCTTTTTATCGAT 140 Query 121 GGGATCGCCAAAATACTACCTGATGGGCTTTTGCAGTTGACAAATACTACAGAGTTGCAA 180 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 141 GGGATCGCCAAGATCCTACCTGATGGACTTTTGCAGTTGACAAATACTACAGAGTTGCAA 200 Query 181 ATGGGTCATGCTTTCTTCAAGAAGCCGTTTGATTTTGATCCATCTTCATCACTATCGTTC 240 |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct 201 ATGGGTCATGCTTTCTTCAAGAAGCCATTTGATTTTGATCCATCTTCATCATTTTCGTTC 260 Query 241 TATACACATTTTGTGTGTGCGCTTGTGCCTCCTAAGTTGGGAGCTGATGGTGGCCATGGG 300 ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 261 TATACACATTTTGTGTGCGCGCTGGTGCCTCCTAAGTTGGGAGCTGATGGTGGCCATGGT 320 Query 301 ATTGTCTTTGTTGTATCTCCTTCCATTGATCTCTCTCATGCATACGCAACTCAGTACTTG 360 || || |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 321 ATCGTTTTTGTTGTATCTCCTTCCATGGATCTCTCTCATGCATACGCAACTCAGTACTTG 380 Query 361 GGGGTCTTCAGCAACTTAACAAATGGGACTTCCTCTTCACATCTGCTAGCTATTGAGCTC 420 ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct 381 GGGGTCTTCAGCAACCTAACAAATGGGACTTCCTCTTCACATCTACTAGCTATTGAGCTC 440 Query 421 GATACCGTTAAGACAGTAGAGTTTAATGAGCTGGAGAAGCCTCATGTTGGTATTGATTTG 480 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 441 GATACCGTTAAGACAGTAGAGTTTAATGAGTTGGAAAAGCCTCATGTTGGTATTGATTTG 500 Query 481 AACAGCCCAATATCTGTTGAATCTGCTCTGCCATCTTACTTTTCCAACGCTTTGGGGAAG 540 |||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct 501 AACAGCCCAATATCTGTTGAATCTGCTCTGCCATCTTACTTTTCTGGCGCCTCAGGGAAG 560 Query 541 AATATAAGCATAAATCTTCTTAGTGGGGAGCCTATACAGGTCTGGGTAGATTACGATGGC 600 |||||||||||| ||||||| ||||||||| |||| ||||| ||||| |||||||||||| Sbjct 561 AATATAAGCATAGATCTTCTGAGTGGGGAGGCTATCCAGGTTTGGGTGGATTACGATGGC 620 Query 601 TCGTTTCTAAATGTTACACTGGCCCCTATAGAAATCAAGAAGCCAAATCAGCCTCTTATA 660 ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 621 TCGTTGCTAAATGTTACACTGGCCCCTATAGAAATCCAGAAGCCAAATCAGCCTCTTATA 680 Query 661 TCAAGAGCCATCAATCTTTCAGAAATCTTTCAAGAGAAGATGTATGTTGGGTTCTCTTCA 720 ||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||| Sbjct 681 TCAAGAGCCATCAATCTTTCAGAGATTTTTCAAGAGAAGATATATGTTGGGTTCTCTTCA 740 Query 721 TCAACAGGGAATCTTCTCAGTAACCATTATATACTTGGATGGAGTTTTAGTAGAAGAAAA 780 ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||| Sbjct 741 TCAACAGGGAATCTTCTTAGTAACCATTATATACTTGGGTGGAGTTTTAGTAGAAGCAAA 800 Query 781 GAACAATTACAGAGCCTGAACCTCTCTACACTTCCTCGGGTTCCTCTTCCTAAAGAGGaa 840 ||||||||||||| |||| ||||||||| ||| |||| | |||||||||||| ||||||| Sbjct 801 GAACAATTACAGAACCTGGACCTCTCTAAACTCCCTCAGATTCCTCTTCCTAGAGAGGAA 860 Query 841 aaaaaGAAATTATCTCCATTACTTATTGGTTTGGTCATCTTATTAGTGATTCCTGTGGTG 900 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 861 AAAAAGAAATTATCTCCACTACTTATTGGTTTGGTCATCTTATTAGTGATTCCTGTGCTG 920 Query 901 ATGGTTCTTGGAGGAGTTTATTGGTACAGGAGAAAGAAATATGCAGAAGTAAAAGAATGG 960 ||||||||||||||| | ||||||| ||| |||||||||||||||||||||||||||||| Sbjct 921 ATGGTTCTTGGAGGAATGTATTGGTTCAGAAGAAAGAAATATGCAGAAGTAAAAGAATGG 980 Query 961 TGGGAAAAGGAATACGGCCCACACCGATTCTCCTATAAGTCTCTGTACAAAGCAACAAAT 1020 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 981 TGGGAGAAGGAATACGGCCCACACCGATTCTCCTATAAGTCTCTGTACAAAGCAACAAAT 1040 Query 1021 GGGTTTCGTAAAGATTGTCGTGTTGGGAAAGGTGGGTTTGGAGAAGTCTACAAAGGAACT 1080 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1041 GGGTTTCGTAAAGATTGTCGTGTTGGGAAAGGTGGGTTTGGAGAAGTCTACAAAGGAACT 1100 Query 1081 TTGCCCGGAGGCAGGCATATAGCTGTGAAAAGACTATCCCACGATGCAGAGCAAGGGATG 1140 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1101 CTGCCCGGAGGCAGGCATATAGCTGTGAAAAGACTATCCCATGATGCAGAGCAAGGGATG 1160 Query 1141 AAACAGTTTGTGGCAGAAGTTGTAACCATGGGAAATTTACAACATCGGAACTTGGTTCCT 1200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1161 AAACAGTTTGTGGCAGAAGTTGTAACCATGGGAAATTTACAACATCGGAACTTGGTTCCT 1220 Query 1201 CTTCTCGGGTATTGCAGGAGAAAATGTGAGTTACTTTTGGTGTCTGAGTACATGCCCAAC 1260 |||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||| Sbjct 1221 CTTCTCGGGTATTGCAGGAGAAAATGTGAGTTGCTTCTGGTCTCTGAGTACATGCCCAAC 1280 Query 1261 GGTAGCCTTGACCAGTACTTGTTTCATGAGGGAAACCCATCTCCTTCATGGTATCAAAGA 1320 ||||| ||||||||||||||||||||||| | |||||||||||||||||||| |||||| Sbjct 1281 GGTAGTCTTGACCAGTACTTGTTTCATGACGAAAACCCATCTCCTTCATGGTTTCAAAGG 1340 Query 1321 ATTTCTATTCTTAAGGACATTGCCTCAGCTCTCAGTTACTTGCATACAGGAACCAAGCAA 1380 ||||||||||||||||||||||| || ||||| |||||| |||||||||||||||||||| Sbjct 1341 ATTTCTATTCTTAAGGACATTGCATCGGCTCTTAGTTACCTGCATACAGGAACCAAGCAA 1400 Query 1381 GTTGTTTTGCACCGGGATATAAAAGCTTCTAACGTCATGTTGGATTCCGAGTTCAACGGG 1440 ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 1401 GTTGTTTTGCATCGGGATATAAAAGCTTCGAACGTCATGTTAGATTCCGAGTTCAACGGG 1460 Query 1441 AGGTTAGGTGATTTTGGAATGGCCAAGTTTCACGACCGTGGAACCAACTTATCTGCAACA 1500 ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 1461 AGGTTAGGTGATTTTGGCATGGCCAAGTTTCACGACCGTGGAGCCAACTTATCTGCAACT 1520 Query 1501 GCCGCTGTGGGAACCATAGGTTACATGGCACCTGAACTAATAACAATGGGCACGTCTATG 1560 ||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct 1521 GCCGCTGTGGGAACCATAGGTTACATGGCACCTGAGCTAATAACAATGGGAACATCTATG 1580 Query 1561 AAAACCGATGTGTATGCTTTTGGTGCTTTTCTTCTTGAAGTAATTTGTGGCAGGCGACCA 1620 ||||||||||||||||| ||||||||||| ||||||||||||| |||||| || ||||| Sbjct 1581 AAAACCGATGTGTATGCCTTTGGTGCTTTCCTTCTTGAAGTAACTTGTGGAAGACGACCT 1640 Query 1621 GTGGAACCTGAGCTACCAGTCGGAAAGCAATATTTGGTCAAGTGGGTCTATGAATGCTGG 1680 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1641 GTGGAACCTGAGCTACCAGTTGGAAAGCAATATTTGGTCAAGTGGGTCTACGAATGCTGG 1700 Query 1681 AAAGAGGCTTGCTTATTCAAGACCAGAGATCCAAGATTGGGAGTAGAATTCTTACCCGAG 1740 ||| ||||||| ||| || |||||||||||||||||||||||| |||| ||||||||| | Sbjct 1701 AAACAGGCTTGTTTACTCGAGACCAGAGATCCAAGATTGGGAGGAGAACTCTTACCCGTG 1760 Query 1741 GAAGTCGAGATGGTTCTGAAACTTGGGTTACTCTGCACAAATGCTATGCCAGAATCAAGG 1800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1761 GAAGTCGAGATGGTTCTGAAACTTGGGTTACTCTGCACAAATGCTATGCCAGAATCAAGG 1820 Query 1801 CCTGCGATGGAACAAGTGGTGCAATACCTTAACCAAGACTTACCCTTACC-GATTTTCTC 1859 ||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||| ||| Sbjct 1821 CCTGCAATGGAACAAGTGGTGCAATACCTTAACCGGGACTTAGCCTTACCAGATTT-CTC 1879 Query 1860 GCCGTCTACTCCAGGTATCGGGGCTTTTATGCCAGTTTCTATGGAAGCATTATCTGCCAT 1919 ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 1880 GCCGTCTACTCCAGGTATCGGGGCTTTTATGCCAGTTTCAATGGATGCATTATCTGCCAT 1939 Query 1920 TGGGGTCTCCAGTGTAAGGAACTCATCAGTTTCTATGTTTGTTACTCACACAATCTTGGA 1979 ||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| Sbjct 1940 TGGGGTCTCCAGTGTAAGGAATTCATCAGTCTCTATGTTTGTTACTCACACGATCTTGGA 1999 Query 1980 CGGGCATGGAAGATAAGATCTAAGAAATTCTATACTCT 2017 ||||||||||||||||||||||||||| | | |||||| Sbjct 2000 CGGGCATGGAAGATAAGATCTAAGAAACTGTGTACTCT 2037 > Ahg937206 jgi|Araly1|937206|scaffold_501397.1 Length=2046 Score = 1949 bits (1055), Expect = 0.0 Identities = 1686/1979 (85%), Gaps = 90/1979 (5%) Strand=Plus/Plus Query 1 ATGGCTTGTAGACTATATTTGGCTTTGATCTTCTCTTGCGTTTATCTGATTTGCCTGTCA 60 |||| ||||||||| || ||| |||||||||||| || ||||||||||||||| ||||| Sbjct 21 ATGGATTGTAGACTGCATCTGGTTTTGATCTTCTCCTGTGTTTATCTGATTTGCTTGTCA 80 Query 61 AGTCAACAAGAAACCGGGTTTGTCTACAATGGCTTCGAGCAAGCAGATCTTTTTATTGAT 120 |||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||| Sbjct 81 GGTCAACAAGAAAACGGGTTTGTATACAATGGCTTCGATCAAGCTGATCTTTTTATTGAT 140 Query 121 GGGATCGCCAAAATACTACCTGATGGGCTTTTGCAGTTGACAAATACTACAGAGTTGCAA 180 ||| ||||||| || || |||| ||| |||||||||||||||||| |||| |||||| || Sbjct 141 GGGCTCGCCAAGATCCTTCCTGGTGGACTTTTGCAGTTGACAAATGCTACGGAGTTGAAA 200 Query 181 ATGGGTCATGCTTTCTTCAAGAAGCCGTTTGATTTTGATCCATCTTCATCACTATCGTTC 240 |||||||||||||| |||||| |||| |||| |||||||||||||||||| || || ||| Sbjct 201 ATGGGTCATGCTTTTTTCAAGCAGCCATTTGGTTTTGATCCATCTTCATCCCTCTCATTC 260 Query 241 TATACACATTTTGTGTGTGCGCTTGTGCCTCCTAAGTTGGGAGCTGATGGT-GGCCATGG 299 ||||||||||||||||| ||||| |||||||||||||| ||||||| || | || || || Sbjct 261 TATACACATTTTGTGTGCGCGCTGGTGCCTCCTAAGTTCGGAGCTG-TGTTAGGGCACGG 319 Query 300 GATTGTCTTTGTTGTATCTCCTTCCATTG-ATCTCTCTCATGC-ATACGCAACTCAGTAC 357 || | |||||||||||||||||| | || || |||||||||| | | ||||||||||| Sbjct 320 TATGGCCTTTGTTGTATCTCCTTCTA-TGAATTTCTCTCATGCGTTTC-CAACTCAGTAC 377 Query 358 TTGGGGGTCTTCAGCAACTTAACAAATGGGACTTCCTCTTCACATCTGCTAGCTATTGAG 417 ||||| ||||||| || || |||||||| ||||||| |||| |||||||||||||||||| Sbjct 378 TTGGGCGTCTTCAACAGCTCAACAAATGTGACTTCCCCTTCTCATCTGCTAGCTATTGAG 437 Query 418 CTCGATACCGTTAAGACAGTAGAGTTTAATGAGCTGGAGAAGCCTCATGTTGGTATTGAT 477 || ||||| ||| |||||||||||||| |||| || || ||| |||||||||| |||||| Sbjct 438 CTTGATACTGTTCAGACAGTAGAGTTTCATGATCTAGAAAAGGCTCATGTTGGGATTGAT 497 Query 478 TTGAACAGCCCAATATCTGTTGAATCTGCTCTGCCATCTTACTTTTCCAACGCTTTGGGG 537 |||||| ||| ||||||||||| |||||||| || ||||||||||| |||| |||||| Sbjct 498 GTGAACAACCCGATATCTGTTGAGTCTGCTCTCCCGTCTTACTTTTCTGACGCCTTGGGG 557 Query 538 AAGAATATAAGCATAAATCTTCTTAGTGGGGAGCCTATACAGGTCTGGGTAGATTACGAT 597 ||||||||||||||| ||||||| |||||||||||| | ||||| ||||| ||||| ||| Sbjct 558 AAGAATATAAGCATAGATCTTCTGAGTGGGGAGCCTGTTCAGGTGTGGGTGGATTATGAT 617 Query 598 GGCTCGTTTCTAAATGTTACACTGGCCCCTATAGAAATCAAGAAGCCAAATCAGCCTCTT 657 || |||||||||||||||||||| ||||||||||||||| |||| ||||| | ||||||| Sbjct 618 GGATCGTTTCTAAATGTTACACTAGCCCCTATAGAAATCCAGAAACCAAACCGGCCTCTT 677 Query 658 ATATCAAGAGCCATCAATCTTTCAGAAATCTTTCAAGAGAAGATGTATGTTGGGTTCTCT 717 |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| Sbjct 678 ATATCAAGAGCCATCAATCTGTCAGAAATTTTTCAAGATAAGATGTATGTTGGGTTCTCT 737 Query 718 TCATC-AACAGGGA-ATCT-TCTCAGTAACCATTATATACTTGGATGGAGTTTTAGTAGA 774 ||| || |||| || | | ||||||||| ||||||||||| ||||||||||||| | Sbjct 738 GGATCGAA-TGGGAGAT-TGAC-CAGTAACCAGTATATACTTGGGTGGAGTTTTAGTAAA 794 Query 775 AGAAAAGAACAATTACAG-AG-C-CTGAACCTCTCT--A-----C-A-----C--TTCCT 816 || ||||||| ||| | || | ||| |||||||| | | | | ||||| Sbjct 795 AGCAAAGAAC--TTA-TGCAGTCTCTGGACCTCTCTAAACTCCCCAAGGCTCCTATTCCT 851 Query 817 CG----G----GTTCCTC-TTCCTAAAGAGGaaaaaaaGAAATTATC-TCCA-TTACTTA 865 | | | || | |||||| |||||||||||| |||||| | |||| || |||| Sbjct 852 AGAAATGAACAGGCCCCCGTTCCTAGAGAGGAAAAAAATAAATTA-CTTCCACTT-CTTA 909 Query 866 TTGGTTTGGTCATCTTATTAG-TGATTCC-TGTGGTGATGGTTCTTGGAGGAGTTTATTG 923 ||||||||||||||||||| | ||| ||| |||| |||||||||| ||||||||||| || Sbjct 910 TTGGTTTGGTCATCTTATT-GCTGA-TCCTTGTGCTGATGGTTCTCGGAGGAGTTTACTG 967 Query 924 GTACAGGAGAAAGAAATATGCAGAAGTAAAAGAATGGTGGGAAAAGGAATACGGCCCACA 983 |||||| |||||||| ||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 968 GTACAGAAGAAAGAAGTATGCAGAAGTAAGAGAATCGTGGGAAAAGGAATACGGCCCACA 1027 Query 984 CCGAT-TCTCCTATAAGTCTCTGTACAAAGCAACAAATGGGTTTCGT-AAAGATTG-TCG 1040 ||||| | ||||| |||||||||||||||||||||||||||||| || ||||| || || Sbjct 1028 CCGATAT-TCCTACAAGTCTCTGTACAAAGCAACAAATGGGTTT-GTCAAAGA-TGCTCT 1084 Query 1041 TGTTGGGAAAGGTGGGTTTGGAGAAGTCTACAAAGGAACTTTGCCCGGAGGCAGGCATAT 1100 |||||||||||||||||||||| |||| |||||||||||| |||| ||||| |||||| Sbjct 1085 TGTTGGGAAAGGTGGGTTTGGAAAAGTTTACAAAGGAACTCTGCCTTCAGGCAAGCATAT 1144 Query 1101 AGCTGTGAAAAGACTATCCCACGATGCAGAGCAAGGGATGAAACAGTTTGTGGCAGAAGT 1160 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1145 AGCTGTGAAAAGACTATCCCATGATGCAGAGCAAGGGATGAAACAGTTTGTGGCAGAAGT 1204 Query 1161 TGTAACCATGGGAAATTTACAACATCGGAACTTGGTTCCTCTTCTCGGGTATTGCAGGAG 1220 ||||| |||||||||||||||||||| ||||||||||||||||| |||||||| || || Sbjct 1205 CGTAACGATGGGAAATTTACAACATCGCAACTTGGTTCCTCTTCTTGGGTATTGTAGAAG 1264 Query 1221 AAAATGTGAGTTACTTTTGGTGTCTGAGTACATGCCCAACGGTAGCCTTGACCAGTACTT 1280 |||| ||||||| || |||| ||||||||||||||||||||||| |||||||||||||| Sbjct 1265 AAAAGGTGAGTTGCTACTGGTCTCTGAGTACATGCCCAACGGTAGTCTTGACCAGTACTT 1324 Query 1281 GTTTCATGAGGGAAACCCATCTCCTTCATGGTAT-CAAAGAATTTCTATTCTTAAGGACA 1339 |||| | | ||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct 1325 GTTTTGTAACCAAAACCCATCTCTTTCATGGT-TGCAAAGAATTTCTATTCTTAAGGACA 1383 Query 1340 TTGCCTCAGCTCTCAGTTACTTGCATACAGGAACCAAGCAAGTTGTTTTGCACCGGGATA 1399 | ||||| ||||||| |||| ||||||||||| |||| | || ||||||||||||||||| Sbjct 1384 TCGCCTCGGCTCTCAATTACCTGCATACAGGAGCCAATCCAGCTGTTTTGCACCGGGATA 1443 Query 1400 TAAAAGCTTCTAACGTCATGTTGGATTCCGAGT-TCAACGGGAGGTTAGGTGATTTTGGA 1458 ||||||||||||| |||||||| ||||| |||| | || || || ||||| |||||||| Sbjct 1444 TAAAAGCTTCTAATGTCATGTTAGATTCTGAGTAT-AATGGAAGATTAGGAGATTTTGGT 1502 Query 1459 ATGGCCAAGTTTCACGACCGTGGAACC-AACTTATCTGCAACAGCCGCTGTGGGAACCAT 1517 |||||||||||||| |||| || | ||| ||||||||||||| |||||||||||||| Sbjct 1503 ATGGCCAAGTTTCAGGACCCCC-AAGCGAACCTATCTGCAACAGCTGCTGTGGGAACCAT 1561 Query 1518 AGGTTACATGGCACCTGAACTAATAACAA-TGGGCACGTCTAT-GAAAACCGATGTGTAT 1575 |||||||||||||||||| ||||||| || ||| || |||| |||| | ||||||||| Sbjct 1562 AGGTTACATGGCACCTGAGCTAATAAGAACTGGA-ACTTCTAAAGAAA-CTGATGTGTAT 1619 Query 1576 GCTTTTGGTGCTTTTC-TTCTTGAAGTAATTTGTGGCAGGCGACCAGTGGAACCTGAGCT 1634 || ||||||| ||||| ||| |||||||| |||||| |||||||| | ||||| ||| | Sbjct 1620 GCCTTTGGTG-TTTTCCTTCATGAAGTAACTTGTGGAAGGCGACCTTTTGAACCAGAGTT 1678 Query 1635 ACCAGTCGGAAA-GCAATATTTGGTCAAGTGGGTCTATGAATGCTGGAAAGAGGCTTGCT 1693 |||| || ||| | ||||| ||||||||||||| | |||||||||||| | |||| || Sbjct 1679 GCCAG-CGCAAAAGAAATATCTGGTCAAGTGGGTTTGCGAATGCTGGAAACATGCTT-CT 1736 Query 1694 T-ATTCAAGACCAGAGATCCAAGATTGGGA-GTAGAATTCTTACCCGAGGAAGTCGAGAT 1751 | | |||||||||||||||||| ||||||| | ||||||| || |||| |||||||| || Sbjct 1737 TTACTCAAGACCAGAGATCCAAAATTGGGAAG-AGAATTCGTATCCGAAGAAGTCGAAAT 1795 Query 1752 GGTTCTGAAACTTGGGTTACTCTGCACAAATGCTATGCCAGAATCAAGGCCTG-CGATGG 1810 |||| ||||||||||||| ||||||||||||| | | |||||||||||||||| | |||| Sbjct 1796 GGTTTTGAAACTTGGGTTGCTCTGCACAAATGATGTTCCAGAATCAAGGCCTGAC-ATGG 1854 Query 1811 AACAAGTGGTGCAATACCTTAA-CC--AAGACTTACCCTTACCG-ATTTTCTCGCC-G-T 1864 ||||||| |||||||||| || || || || |||||||||| |||| ||| || | | Sbjct 1855 GACAAGTGATGCAATACCT-AAGCCGGAA-ACA-ACCCTTACCGGATTT-CTCACCAGAT 1910 Query 1865 CTACTCCAGGTATCGGGGCTTTTATGCCAGTTTCTA-TGGAAGCATTATCTGCCATTGG 1922 | |||||||||| |||| ||||||||| ||||| | |||||||| |||| ||||||| Sbjct 1911 -T-CTCCAGGTATTGGGGGTTTTATGCCGGTTTC-AGTGGAAGCAGCATCTACCATTGG 1966 > Ahg937203 jgi|Araly1|937203|scaffold_501394.1 Length=2083 Score = 612 bits (331), Expect = 4e-174 Identities = 1315/1767 (74%), Gaps = 159/1767 (9%) Strand=Plus/Plus Query 142 GATGGGCTTTTGCAGTTGACAAATACTACAGAGT-TGCAA-ATGGGTCATGCTTTCTTCA 199 ||||| ||||||||| | || || | ||| | | |||| | ||||||||||||||||| Sbjct 171 GATGGACTTTTGCAGCTAACCAACGCCACA-ACTCAGCAACA-GGGTCATGCTTTCTTCA 228 Query 200 AGAAG-CCGTTTG-ATT---TTGATC--CATCTTC-ATCACTATCGTTCT-ATACACATT 250 | || || || | ||| || | | |||| || ||| || || |||| | || |||| Sbjct 229 A-CAGACCATTCGAATTCGGTTCAGCGTCATC-TCAATCTCTTTCTTTCTCA-ACTCATT 285 Query 251 TTGTGTGTGCGCT-TGTGCCTCCTAAGTTGGGAGCTGATGGTGGCCATGGGATTGTC-TT 308 | || | |||||| | || | |||||| ||||| || |||||| |||||||||| | || Sbjct 286 TCGT-T-TGCGCTCT-TGTC-CCTAAGCCGGGAGTTGTTGGTGGTCATGGGATTG-CTTT 340 Query 309 TGTTGTATC-TCCTTCCATTGATCTCT-CTCATGCATA-CGCAACTCAGTACTTGGGGGT 365 |||| |||| | |||| || ||| | | | || ||| | | ||||||| || || || | Sbjct 341 TGTTCTATCAT-CTTCAATGGAT-TTTACACAAGCAGATC-CAACTCAATATTTAGGACT 397 Query 366 CTTCAGCAACTTAACAAATGGGACT-TCC-TCTTCACATCTGCTAGCTATTGAGCTCGAT 423 ||||| || || ||| ||| ||| | ||| ||||| ||| | ||||||||||||| ||| Sbjct 398 CTTCAACATCTCAACTAAT-GGA-TCTCCTTCTTCTCATGTTTTAGCTATTGAGCTTGAT 455 Query 424 ACCGT--TAAGACAGTAGAGTTTAATGAGCTGGA-GAAGCCTCATGTTGGTATTGATTTG 480 || || ||| | | ||||||| |||| | || || | ||||| || || || | Sbjct 456 ACGGTCCAAAG-C-GCAGAGTTTGATGATATCGACAAAAAC-CATGTCGGGATAGACATA 512 Query 481 AACAGCC-CAATATCTGTTGAATCTGCT-CTGCCATCTTACTT-TTCCA-AC-GCTTTGG 535 ||||||| | | || |||||||||||| | | | ||||| || || || || | | Sbjct 513 AACAGCCTCCA-GTCCGTTGAATCTGCTCCAG-CTTCTTA-TTATT-CAGACAG-AGAAG 567 Query 536 GGAAGA-ATATAAGCAT-AAATCTTCTT-AGTGGGGAGCCTATACAGGTCTGGGTAGATT 592 |||||| | | |||| | ||| | |||| ||||| | ||||| ||||| ||| | |||| Sbjct 568 GGAAGAGA-AAAAGCTTGAAA-C-TCTTGAGTGGAAATCCTATTCAGGTATGGATTGATT 624 Query 593 ACG---ATGGCTCGTTTCTAAATGTTACACTGGC-CC-CTATAGAAATCAAGAAGCCAAA 647 | | || ||| | || |||||||| | || || ||| | ||||| ||||||||| Sbjct 625 ATGAAAAT-ACTC--TACTCAATGTTACTTTAGCACCTCTA-AAAAATC-AGAAGCCAAG 679 Query 648 TCAGCCTCTTATATCAAGAGCCATCAATCTTTCAGAAATCTT-TC--A-AGAGAAGATGT 703 | |||||||| | |||||| |||||||||| | | |||||| | | || ||| | | Sbjct 680 TAAGCCTCTTTTGTCAAGAACCATCAATCTCACCGCAATCTTCCCGGATCGAAAAGCT-T 738 Query 704 ATGTTGGGTTCTCTTCAT-CAACAGGGAATC-TT-CTCAGTAACCATTATATACTT-GGA 759 ||| ||||| || | | | || || || || | ||| | || || || ||| ||| Sbjct 739 TTGTCGGGTTTTCGGC-TGCGAC-TGG-TTCATTGATTAGTTATCAATACAT-CTTAGGA 794 Query 760 TGGAGTTTTAGTAGAAGAAAAGAACAATTACAGAG-CCTGAACCTCTCTACACTTCCTC- 817 |||||||| || ||||| | || |||||||| | || || |||||| |||||| | Sbjct 795 TGGAGTTTCAGCAGAAGCAGAGTGTTGTTACAGAGTCTTG-ACATCTCTAAACTTCC-CA 852 Query 818 GGGTTCCTCTTCCTAAAGAGGaaaaaaaGAAATTATCTCCAT-TACTTATTGGTTTGGTC 876 |||||||| ||| |||| || ||||| |||||| | | |||||| | || | Sbjct 853 AGGTTCCTCGTCC-CAAGA--AACCTGAGAAAACATCTCC-TCTGCTTATT-G-TT-CT- 904 Query 877 A-T-CTTATTAGT-G-ATTCCT-GTGGT-GATGGTTCTTGGAGGAGTTTATTGGTACAGG 930 | | ||| || | | | || | || | | |||||| |||||| |||||| ||||| Sbjct 905 ACTGGTTA-TACTCGCACTCATAGTAATCG-CGGTTCTAGGAGGATTTTATTTCTACAGA 962 Query 931 AGAAAGAAATATGCAGAAGTAAAAGAATGGTGGGAAAAGGAATACGGCCCACACCGATT- 989 |||||||| ||||||||||| ||||| |||||||| ||||| || |||| || || Sbjct 963 AGAAAGAAGTATGCAGAAGTTAAAGAGCCATGGGAAAAAGAATATGGTCCACTTCG-TTA 1021 Query 990 CTCCTAT-AAGTCTCTGTACAAAGCAACAA-ATGGGTTTCGTAAAGATTGTCGTGTTGGG 1047 |||||| || ||| | ||||||||||||| | |||||| ||||| ||||| |||| Sbjct 1022 TTCCTATGAA-TCTTTATACAAAGCAACAAGA-GGGTTTAACAAAGAAGGTCGTCTTGGA 1079 Query 1048 AAAGGTGGGTTTGGAGAAGTCTACAAAGGAACTTTGCC-C--GGAGGCAGGCATATAGCT 1104 ||||| || ||||||||||| || ||||||| | |||| | | ||| | | ||||||| Sbjct 1080 AAAGGCGGTTTTGGAGAAGTATATAAAGGAAGTCTGCCTCTTGTAGG-A-G-ATATAGCG 1136 Query 1105 GTGAAAAGACTATCCCACGATGCAGAGCAAGGGATGAAACAGTTTGTGGCAGAAGTTGTA 1164 ||||| ||| |||| || |||||||||||||||||||||||||||||||| |||||||| Sbjct 1137 GTGAAGAGATTATCACATGATGCAGAGCAAGGGATGAAACAGTTTGTGGCTGAAGTTGTG 1196 Query 1165 ACCATGGGAAATTTACAACATCG-GAA-CTTGGTTCCTCTTCTCGGGTATTGCAGGAGAA 1222 || ||||||| |||||| || | ||| || ||||||||||||||||||||| ||| ||| Sbjct 1197 ACAATGGGAAGTTTACAGCA-CAAGAATCT-GGTTCCTCTTCTCGGGTATTGTAGGCGAA 1254 Query 1223 AATGTGAGTTACTTT-TGGTGTCTGAGTACATGCCCAACG-G-TAGCCTTGACCAGTACT 1279 || | |||||| || |||| ||| |||||||| || | | |||| |||| || |||| Sbjct 1255 AAGGGGAGTTA-TTGCTGGTTTCTAAGTACATGG--AAGGAGGTAGCGTTGATCAATACT 1311 Query 1280 TGTTTCATGAGGGA--AACC-CATCTCCTTCATGGTATCAAAGAATTTCTATTCTTAAG- 1335 ||||||| || || |||| | ||| ||| |||| ||||||| | | || || || Sbjct 1312 TGTTTCAC-AGCGATCAACCGCCTCT--TTCTTGGTCTCAAAGACTCGCGATA-TTGAGA 1367 Query 1336 GACATTGCCTCAGCTCTCA-GTTACTTGCATACAGGAACCAAG-CAAGTTGTTTTGCACC 1393 || || || || || || | ||||||||||||||||| ||| | ||||||||| | |||| Sbjct 1368 GATATCGCATCTGCGCT-ATGTTACTTGCATACAGGAGCCA-GTCAAGTTGTTCTACACC 1425 Query 1394 GGGATATAAAAGCTTCTAACGTCATGTTGGATTCCGAGTT--CAACGGGAGGTTAGGTGA 1451 | ||||| ||||||||||| ||||||| || | || ||| || ||||| || Sbjct 1426 GAGATATCAAAGCTTCTAATATCATGTTAAATGAA-ACTTTACAA-GGCTTCTTAGGAGA 1483 Query 1452 TTTTGGAATGGCCAAGTTTCACGACCGTGGAACCAACTTATCTGCAACAGCCGCTGTGGG 1511 |||||| ||||| |||||| | || | |||| | ||| | ||||| ||||| ||||| || Sbjct 1484 TTTTGGGATGGCTAAGTTTGATGATCATGGAGCTAACCTCTCTGCCACAGCAGCTGTAGG 1543 Query 1512 AACCATAGGTTACATGGCAC-CTGAACTAATAACAATGGGCACGTCTATGAA-AACCGAT 1569 ||||||||| |||||||| | | || |||| ||||| || || || | || ||||||| Sbjct 1544 AACCATAGGCTACATGGCGCTC-GAGCTAACAACAACAGGAACTTCAAC-AAGAACCGAT 1601 Query 1570 GTGTATGCTTTTGGTGCTTTTCTTCTTGAAGTAATTTGTGGCAGGCGACCAGTGGAACCT 1629 |||||||| |||||||| ||| | |||||||||| ||||| ||| ||||| | || || Sbjct 1602 GTGTATGCATTTGGTGCATTTATGCTTGAAGTAACATGTGGGAGGAGACCATTTGATCCC 1661 Query 1630 GAGCTACCAGTCG-GAAAGCAATATTTGGTCAAGTGGGTCTATGAATGCT-GGA-AAGAG 1686 || | || |||| |||| | | |||| ||||||||||| | ||||| || ||| || || Sbjct 1662 GAAATGCCGGTCGAGAAA-CGACATTTAGTCAAGTGGGTTTGTGAAT-CTTGGAGAAAAG 1719 Query 1687 GCTTGCT-TATTCAA-GACCAGAGATCCAAGATTGGGAG-TAGAATTCTTACCCGAGGAA 1743 | || || || |||| | | | |||| |||||||| ||| || ||||| ||||||||||| Sbjct 1720 G-TT-CTCTAGTCAATG-CTATAGATACAAGATTGAGAGGTA-AATTCGTACCCGAGGAA 1775 Query 1744 GTCGAGATGGTTCTGAAACTTGGGTTACTCTGCACAAATGC-T-ATGCCAGAATCAAGGC 1801 ||||| |||||||||||||| ||||||||||| |||| || | || |||||| |||| | Sbjct 1776 GTCGAAATGGTTCTGAAACTCGGGTTACTCTGTACAA--GCATTATACCAGAAGCAAGAC 1833 Query 1802 CTG-CGATGGAACAAGTGGTGCAATAC 1827 || | ||||||||||||||||||||| Sbjct 1834 CTAAC-ATGGAACAAGTGGTGCAATAC 1859 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79570521805 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5