BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G45480.1
Length=1208
Score E
Sequences producing significant alignments: (Bits) Value
Ahg897344 jgi|Araly1|897344|Al_scaffold_0005_1310 955 0.0
Ahg897345 jgi|Araly1|897345|Al_scaffold_0005_1311 723 0.0
Ahg897340 jgi|Araly1|897340|Al_scaffold_0005_1306 614 6e-175
Ahg897338 jgi|Araly1|897338|Al_scaffold_0005_1304 383 2e-105
Ahg897125 jgi|Araly1|897125|Al_scaffold_0005_1091 322 4e-87
Ahg936973 jgi|Araly1|936973|scaffold_501164.1 106 4e-22
Ahg484937 jgi|Araly1|484937|fgenesh2_kg.5__929__AT3G45500.1 73.1 4e-12
> Ahg897344 jgi|Araly1|897344|Al_scaffold_0005_1310
Length=867
Score = 955 bits (517), Expect = 0.0
Identities = 746/853 (87%), Gaps = 30/853 (4%)
Strand=Plus/Plus
Query 277 GTCATGGGGAGATCTGTGCCTAAGGATAAGAAAATCGCCTTGATAATGGATGAGGTGCAA 336
|||||||||||||||||||||||| || ||||||||||| || |||| ||||| ||||||
Sbjct 1 GTCATGGGGAGATCTGTGCCTAAGCATGAGAAAATCGCCATGCTAATAGATGATGTGCAA 60
Query 337 CGCATAAGACAACAATTTTCATCTAGCATCCCTTTTCTTGTGGCTAGTAATGAAATTAAG 396
||||| ||||||||||||||||||||||||||| |||||||| |||| ||| ||| | ||
Sbjct 61 CGCATCAGACAACAATTTTCATCTAGCATCCCTATTCTTGTGACTAGAAATCAAACTGAG 120
Query 397 TTTGTGTATAAACTTGCAAAGGAAACACTAGTTTCTAACATCAGCATACCTA-------- 448
||||| ||||||||||| ||||||||| |||||||||||| |||||||||||
Sbjct 121 TTTGTCTATAAACTTGCCAAGGAAACAATAGTTTCTAACACCAGCATACCTATGCCTCGT 180
Query 449 GG-CCTCAGAAGAAGACTTGTGGTAACTGTTTTAACGATGGTATCAAAGGTGAGAACATG 507
|| ||||||||||||||||||||||||| ||| |||||| | | |||||||||| |||
Sbjct 181 GGTTCTCAGAAGAAGACTTGTGGTAACTGCTTTCACGATGATGTGGAAGGTGAGAAGATG 240
Query 508 TTTTCCGCTGATTTATGCAGTCATTACTTCTGTGTGGAGTGCATGAAGGAACATATAGAA 567
||||||| || ||||||||||||| ||||||||||||| |||||||| |||||||||||
Sbjct 241 TTTTCCGTTGCTTTATGCAGTCATCACTTCTGTGTGGACTGCATGAAACAACATATAGAA 300
Query 568 GTCAGTCTAAACGAGGGAGGTT-TACCGAGATGTCCTCATGATGGCTGCACATCAAACCT 626
|| ||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||
Sbjct 301 GTTAGTCTAAACGAGGGA-GTTGTACCGAGATGTCCTCATTATGGCTGCACATCAAACCT 359
Query 627 AACTCTTAGAAGCTGTGACCATCTTTTGACACCTAAAC-AAAGAGAGATGTGGGAAAAAA 685
||| |||| || ||||| |||||||||||||||||||| |||| |||||||||||| | |
Sbjct 360 AACACTTAAAATCTGTGCCCATCTTTTGACACCTAAACTAAAG-GAGATGTGGGAACATA 418
Query 686 GGATCAAAGAGGAGTCAATTCCTGTATGTGACAGATTTCATTGCCCAAATCCAAGGTGCT 745
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 419 GGATAAAAGAGGAGTCAATTCCGGTATGTGACAGATTTCATTGCCCAAATCCAAGGTGCT 478
Query 746 GGGCTTTGATGTCGAAGACGGAGCTCACTGAATCTACTGAAGAAGATGGAGTTAGGAGAT 805
|||| ||||||||||| || ||||| ||||||||||||||| ||||||||||||||
Sbjct 479 GGGCATTGATGTCGAAAACCGAGCTTGTTGAATCTACTGAAGA---TGGAGTTAGGAGAT 535
Query 806 GTTGCTATAAATGCCGCAAACACTTTTGTATTAACTGCAAAGTTCCGTGGCATAGTAACT 865
|||| ||||||||| ||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct 536 ACTGCTTTAAATGCCGTAAACACTTTTGCATTACCTGCAAAGTTCTGTGGCATAGTAACT 595
Query 866 TGTCGTGCAAGGAACACAAGAGTTCCGGT-CGTGAGCCTATTACAACAGTGTGGCGTCAA 924
|||| ||||||||| |||||||||| ||| | |||||| |||||||||||||||||||
Sbjct 596 TGTCTTGCAAGGAATACAAGAGTTC-GGTTCAAAAGCCTACTACAACAGTGTGGCGTCAA 654
Query 925 TGTAGAAGTTGCCTACACAAGATAAAACTATCGG-AAGAACGCATGCC-TGTAACTTGCA 982
||||||||||||| ||||| |||||||||||||| || || |||| | ||| |||||||
Sbjct 655 TGTAGAAGTTGCCAACACATGATAAAACTATCGGGAA-AATGCAT-CAATGTCACTTGCA 712
Query 983 GGTGTGGCTATAAGTTTTGCTATGCATGTGGAGCTCAATGGAAGCTTGGAGGTTGTTGCT 1042
|||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 713 GGTGTGGCTATAGGTTTTGCTATGCATGTGGAGCCCAATGGAAGCTTGGAGGTTG---CT 769
Query 1043 CTCATCATCTCCAAGAGGTGATGGAT-TGG-G-TAGCAATAGTCCTCATTTTTCTTGCTT 1099
||||||||| ||||| ||||||||| ||| | | | |||||||||||||||| | ||
Sbjct 770 CTCATCATCGCCAAGCGGTGATGGAACTGGTGGTTGGTTTAGTCCTCATTTTTCTCG-TT 828
Query 1100 TCG-TAAGTCTTT 1111
|| || ||||||
Sbjct 829 TCCATAGGTCTTT 841
> Ahg897345 jgi|Araly1|897345|Al_scaffold_0005_1311
Length=651
Score = 723 bits (391), Expect = 0.0
Identities = 571/655 (87%), Gaps = 24/655 (4%)
Strand=Plus/Plus
Query 280 ATGGGGAGATCTGTGCCTAAGGATAAGAAAATCGCCTTGATAATGGATGAGGTGCAACGC 339
|||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||
Sbjct 1 ATGGGGAGATCTGTGCCTAAGGATGAGAAAATCGCCTTGCTAATGGATGATGTGCAACGC 60
Query 340 ATAAGACAACAATTT-TCATCTAGCATCCCTTTTCTTGTGGCTAGTAATGAAATTAAGTT 398
|| |||||||||||| | ||||||||||||| ||||||||||||| ||| ||| | | ||
Sbjct 61 ATCAGACAACAATTTAT-ATCTAGCATCCCTATTCTTGTGGCTAGAAATCAAACTGATTT 119
Query 399 TGTGTATAAACTTGCAAAGGAAACACTAGTTTCT---AACATCAG--C-ATACCTAG-GC 451
||| |||||||||||||||||||| |||||||| |||||| | || ||| | |
Sbjct 120 TGTCCATAAACTTGCAAAGGAAACAATAGTTTCTCGCCTCATCAGACCTATGCCTCGTAC 179
Query 452 --CTCAGAAGAAGACTTGTGGTAACTGTTTTAACGATGGTATCAAAGGTGAGAACATGTT 509
||||||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||
Sbjct 180 TGCTCAGAAGAAGACTTGTGGTAACTGCTTTGACGATGTTATCAAAGGTGAGAAGATGTT 239
Query 510 TTCCGCTGATTTATGCAGTCATTACTTCTGTGTGGAGTGCATGAAGGAACATATAGAAGT 569
||||| || ||||||| ||||| | ||||||||||| |||||||| |||||||||||||
Sbjct 240 TTCCGTTGCTTTATGCCGTCATCAATTCTGTGTGGACTGCATGAAACAACATATAGAAGT 299
Query 570 CAGTCTAAACGAGGGAGGTTTACCGAGATGTCCTCATGATGGCTGCACATCAAACCT-AA 628
||||||||||| |||||| |||| |||||||||||||||||||||||||||||||| ||
Sbjct 300 GAGTCTAAACGACGGAGGTGTACCAAGATGTCCTCATGATGGCTGCACATCAAACCTGAA 359
Query 629 CTCTTAGA-AGC-TGTGA-CCATCTTTTGACACCTAAACAAAGAGAGATGTGGGAAA-AA 684
|| || | ||| ||| | |||||||||||||||||||||||||||||||||| ||| ||
Sbjct 360 -TC-TA-ATAGCTTGT-ACCCATCTTTTGACACCTAAACAAAGAGAGATGTGG-AAACAA 414
Query 685 AGGATCAAAGAGGAGTCAATTCCTGTATGTGACAGATTTCATTGCCCAAATCCAAGGTGC 744
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||
Sbjct 415 AGGATCAAAGAGGAGTCAATTACTGTATATGACAGATTTCATTGCCCAAATCCAAGTTGC 474
Query 745 TGGGCTTTGATGTCGAAGACGGAGCTCACTGAATCTACTGAAGAAGATGGAGTTAGGAGA 804
||||||||||||||||| || ||||||| | |||||||||| || |||||||||||||
Sbjct 475 TGGGCTTTGATGTCGAAAACCGAGCTCATTAAATCTACTGACGA---TGGAGTTAGGAGA 531
Query 805 TGTTGCTATAAATGCCGCAAACACTTTTGTATTAACTGCAAAGTTCCGTGGCATAGTAAC 864
|||| ||||||| | |||| |||||| ||||| ||||||||||||||||||||||||
Sbjct 532 CACTGCTTTAAATGCTGGAAACCCTTTTGCATTAATTGCAAAGTTCCGTGGCATAGTAAC 591
Query 865 TTGTCGTGCAAGGAACACAAGAGTTCCGGTCGTGAGCCTATTACAACAGTGTGGC 919
||||| ||||||||| |||| || || |||| |||||| ||||||||||||||
Sbjct 592 TTGTCTTGCAAGGAATACAAAAGATCAGGTCAAAAGCCTACTACAACAGTGTGGC 646
> Ahg897340 jgi|Araly1|897340|Al_scaffold_0005_1306
Length=1404
Score = 614 bits (332), Expect = 6e-175
Identities = 635/775 (82%), Gaps = 45/775 (6%)
Strand=Plus/Plus
Query 275 TGGTCATGGGGAGATCTGTGCCTAAGGATA-AGAAAATCGCCTTGATAATGGATGAGGTG 333
|||||||| ||||||| | ||| || | | |||| ||||||||| |||||||||| ||
Sbjct 566 TGGTCATGAGGAGATCCGCACCTGAGCA-AGAGAACATCGCCTTGCTAATGGATGATGTA 624
Query 334 CAACGCATAAGACAACAATTTTCATCTAGCATCCCT-TTTCTTGTGGCTAGTAATGAAAT 392
||||||||||||| | || | |||||||||| ||| || | |||| ||| ||| ||
Sbjct 625 CAACGCATAAGACGAGAACTGACATCTAGCATTCCTGTTAC-TGTGACTAAAAATCAAGC 683
Query 393 TAAGTTTGTGTATAAACTTGCAAAGGAAACACTAGTTTCTA-ACATCA-GCATACCTAGG 450
||||||| |||||| ||| |||||||| | ||| | | || | | || | ||||
Sbjct 684 CAAGTTTGCGTATAAGCTTTCAAAGGAATTAATAG--GC-ATACGT-ACGCCT-CCTA-- 736
Query 451 CCTCAGAAGAAGACTTGTGGTAACTGTTTTAACGATGGTATCAAAGGTGAGA-ACATGTT 509
|| ||||||||||||| || | | || | ||||| || ||| | ||||||
Sbjct 737 -CTGAGAAGAAGACTTGCGG---CGGGGTT----A--GTATCGAACCTGA-ACCCATGTT 785
Query 510 TTCCGCTGATTTATG-CAGTCATTACTTCTGTGTGGAGTGCATGAAGGAACATATAGAAG 568
||||| || |||||| | ||||| | ||| |||||||||| ||||| ||||||||||||
Sbjct 786 TTCCGTTGCTTTATGTC-GTCATCAATTCGGTGTGGAGTGGATGAAACAACATATAGAAG 844
Query 569 TCAGTCTAAACGAGGGAGGTTTACCGAGATGTCCTCATGATGGCTGCACATCAAACCTAA 628
| || |||| |||||||| ||||||||||||||||| ||||||||||||||| |||||
Sbjct 845 TGAGGCTAATCGAGGGAGACGTACCGAGATGTCCTCATTATGGCTGCACATCAATCCTAA 904
Query 629 CTCTTAGAAGCTGTGACCATCTTTTGACACCTAAAC-AAAGAGAGATGTGGGAAAAAAGG 687
|||||| |||||||| |||||||||||||||||||| ||| ||||||||||||| |||||
Sbjct 905 CTCTTAAAAGCTGTGCCCATCTTTTGACACCTAAACTAAA-AGAGATGTGGGAACAAAGG 963
Query 688 ATCAAAGAGGAGTCAATTCCTGTATGTGACAGATTTCATTGCCCAAATCCAAGGTGCTGG 747
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 ATCAAAGAGGATTCAATTCCTGTATGTGACAGATTTCATTGCCCAAATCCAAGGTGCTGG 1023
Query 748 GCTTTGATGTCGAAGACGGAGCTCACTGAATCTACTGAAGAAGATGGAGTTAGGAGATGT 807
|||||||||||||| || |||||| ||| ||||||||||| |||||||||||||||
Sbjct 1024 GCTTTGATGTCGAAAACCGAGCTCTTTGAGTCTACTGAAGA---TGGAGTTAGGAGATGC 1080
Query 808 TGCTATAAATGCCGCAAACACTTTTGTATTAACTGCAAAGTTCCGTGGCATAGTAACTTG 867
|||| |||||||||||||| |||||| |||||||||||||||| ||||||||||||||||
Sbjct 1081 TGCTTTAAATGCCGCAAACCCTTTTGCATTAACTGCAAAGTTCTGTGGCATAGTAACTTG 1140
Query 868 TCGTGCAAGGAACACAAGA-GTTCCGGTCGTGAG-CCTATTACAACAGTGTGGCGTCAAT 925
|| ||||||||| |||||| ||| |||| | | |||| | |||| | | ||||||||
Sbjct 1141 TCTTGCAAGGAATACAAGACGTTG-GGTC-TAAATCCTA--A-AACAATATCGCGTCAAT 1195
Query 926 GTAGAA-GTTGCCTACACAAGATAAAACTATCGGA-AGAACGCATGCC-TGTAACTTGCA 982
||| || || ||| ||||| ||| |||| | || | | ||| ||| | ||| |||||||
Sbjct 1196 GTAAAAAGT-GCCAACACATGATCAAACAAACGCATAAAAC-CAT-CAATGTGACTTGCA 1252
Query 983 GGTGTGGCTATAAGTTTTGCTATGCATGTGGAGCTCAATGGAAGCTTGGAGGTTG 1037
||||||| ||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 1253 GGTGTGGTTATTCGTTTTGCTACACATGTGGAGCTCAATGGAAGCTTGGAGGTTG 1307
> Ahg897338 jgi|Araly1|897338|Al_scaffold_0005_1304
Length=537
Score = 383 bits (207), Expect = 2e-105
Identities = 381/463 (82%), Gaps = 20/463 (4%)
Strand=Plus/Plus
Query 597 ATGTCCTCATGATGGCTGCACATCAAACCT-AACTCTTAGAAGCTGTGACC-ATCTTTTG 654
|||| ||||| | ||||||| ||| ||| | || ||||||||| |||| || ||||||||
Sbjct 1 ATGT-CTCATTACGGCTGCAAATCGAACTTGAA-TCTTAGAAGTTGTG-CCTATCTTTTG 57
Query 655 ACACCTAAA-CA-AAGAGAGATGTGGGAAAAAAGGATCAAAGAGGAGTCAATTCCTGTAT 712
||||||||| | || | |||||||| || |||||||||| | || || |||||| ||
Sbjct 58 ACACCTAAAGTACAA-A-AGATGTGGCAACGAAGGATCAAACAAGACTCGATTCCTCAAT 115
Query 713 GTGACAGATTTCATTGCCCAAATCCAAGGTGCTGGGCTTTGATGTCGAAGACGGAGCTCA 772
| |||||||||||||||||||| ||||| |||| ||||| ||||||||| || |||||
Sbjct 116 GGGACAGATTTCATTGCCCAAAACCAAGTTGCTCGGCTTGGATGTCGAAAACTAAGCTCT 175
Query 773 CTGAATCTACT-GAAGAAGATGGAGTTAGGAGATGTTGCTATAAATGCCGCAAACACTTT 831
|||||||| | |||||||| ||||||||||||||||||| |||||| || | || ||||
Sbjct 176 TTGAATCTA-TCGAAGAAGAGGGAGTTAGGAGATGTTGCTTTAAATGTCGTACACCCTTT 234
Query 832 TGTATTAACTGCAAAGTTCCGTGGCATAGTAACTTGTCGTGCAAGGAACACAAGAGTTCC 891
|| || || ||||||||||||||||||||||||||||||||| | ||| ||| || |||
Sbjct 235 TGCATCAATTGCAAAGTTCCGTGGCATAGTAACTTGTCGTGCGACGAATACAGGAATTC- 293
Query 892 GGT-CGTGAGCCTATTACAACAGTGTGGCGTCAATGTAGAAGTTGCCTACACAAGATAAA 950
| | | |||||| ||||| |||||||| ||||||||||||||||| ||||| ||| |
Sbjct 294 GCTTCCAAAGCCTACTACAATAGTGTGGCATCAATGTAGAAGTTGCCAACACATGATCGA 353
Query 951 ACTATCGGA-AGAACGCA-TGCCTGTAACTTGCAGGTGTGGCTATAAGTTTTGCTATGCA 1008
||||||||| | ||| | | ||||||||||||||||||||| ||||||||| ||
Sbjct 354 ACTATCGGACA-AACTCTCTAAAA-TAACTTGCAGGTGTGGCTATACGTTTTGCTACACA 411
Query 1009 TGTGGAGCTCAATGGAAGCTTGGAGGTTGTTGCTCTCATCATC 1051
|| |||||||||||||||||| ||||||| |||||||||||
Sbjct 412 TGCGGAGCTCAATGGAAGCTTAGAGGTTG---CTCTCATCATC 451
> Ahg897125 jgi|Araly1|897125|Al_scaffold_0005_1091
Length=798
Score = 322 bits (174), Expect = 4e-87
Identities = 482/626 (77%), Gaps = 39/626 (6%)
Strand=Plus/Plus
Query 280 ATGGGGAGATCTGTGCCTAAGGA-TAAGA-AA-ATCGCCTTGATAATGGATGAGGTGCAA 336
||||||||||| || || ||| |||| || || ||| || ||||| |||| ||||||
Sbjct 1 ATGGGGAGATCCGT-CC--CGGAGCAAGATAACATTGCCATGCTAATGAATGATGTGCAA 57
Query 337 CGCATAAGACAACAATTTTCATCTAG-CATCCCTTTTCTTGTGGCTAGTA-ATGAAATTA 394
||||| ||||||||||| |||||||| ||||| |||| ||| |||| | || |||||
Sbjct 58 CGCATGAGACAACAATTGTCATCTAGTAATCCC-ATTCTGGTGACTAG-AGATCAAATT- 114
Query 395 AG-TTTG-TGTATAAACTTGCAAAGGAAACACTAGTTTCTAACATCAGCATACCTAGGCC 452
|| |||| | ||||| ||||||| ||||||| ||| ||| | |||||||||| || |||
Sbjct 115 AGCTTTGCT-TATAAGCTTGCAATGGAAACAGTAGCTTCGGATATCAGCATACGTATGCC 173
Query 453 TCAGAAGAAGACTTGTGGTAACTGTTTTAACGATGGTATCAAAGGTGAGAACATGTTTTC 512
| | |||||| | | |||||| || |||| | | ||| |||| | |||| |||
Sbjct 174 T-----G-CGACTTGCAGCATCTGTTTCAATGATGATTTGGAAGCTGAGCAGATGTATTC 227
Query 513 CGCTGATTTATGCAGTCATTACTTCTGTGTGGAGTGCATGA-AGGAACATATAGAAGTCA 571
| | |||||| ||||| | |||||||| |||||| ||| | | |||||||||||| |
Sbjct 228 TGTTCCCTTATGCGGTCATCAATTCTGTGTCGAGTGCGTGAGACG-ACATATAGAAGTGA 286
Query 572 GTCTAAACGAGGGAGGTTTACCGAGATGTCCTCATGATGGCTGCACA-TCAAACCTAACT 630
| ||| ||||||| || |||||| ||||| |||| || ||| | || || ||||||
Sbjct 287 GGCTACTCGAGGGAAGTGTACCGACATGTCTTCATTATCAATGC-GAGTCTAAGCTAACT 345
Query 631 CTTAGAAGCTGTGACCATCTTTTGACACCTAAAC-AAAGAGAGATGTGGGAAAAAAGGAT 689
|||||||| |||||| ||||||| |||||||||| ||| || ||| |||||| |||||||
Sbjct 346 CTTAGAAGTTGTGACAATCTTTTAACACCTAAACTAAA-AGCGATATGGGAACAAAGGAT 404
Query 690 CAAAGAGGAGTCAATTCCTGT-ATGTGACAGA-TTTCATTGCCCAAATCCAAGGTGCTG- 746
| ||||||| | |||||||| | || ||| ||| |||| ||||| || | |||| |
Sbjct 405 CGAAGAGGAATTGATTCCTGTGCCG-GATAGAGTTT-ATTGTCCAAAACCGACGTGC-GC 461
Query 747 GGCTTTGATGTCGAAGACGGAGCTCACTGA-ATCTACTGAAGAAGATGGA-GT--TAGGA 802
|| || |||||||| || ||||| || | || ||||||||||||| | || |||||
Sbjct 462 GGGATTAATGTCGAAAACCGAGCTTTCT-ACCTCAACTGAAGAAGATGAAGGTAGTAGGA 520
Query 803 GATGTTGCTAT-AAATGCCGCAAACACTTTTGTATTAACTGCAAAGTTCCGTGGCATAGT 861
| ||||| | | |||||| | ||| |||||| || ||||||||||||||||||||||||
Sbjct 521 GTTGTTG-TGTCAAATGCGGTGAACCCTTTTGCATCAACTGCAAAGTTCCGTGGCATAGT 579
Query 862 AACTTGTCGTGCAAGGAACACAAGAG 887
|||||||| ||| | || |||||||
Sbjct 580 AACTTGTCATGCGATGATTACAAGAG 605
> Ahg936973 jgi|Araly1|936973|scaffold_501164.1
Length=506
Score = 106 bits (57), Expect = 4e-22
Identities = 113/139 (81%), Gaps = 7/139 (5%)
Strand=Plus/Plus
Query 754 ATGTCGAAGACGGAGCTCACTGA-ATCTACTGAAGAAGATGGA-GT--TAGGAGATGTTG 809
|||||||| || ||||| || | || ||||||||||||||| || |||||| |||||
Sbjct 25 ATGTCGAAAACCGAGCTTTCT-ACCTCAACTGAAGAAGATGGAGGTAGTAGGAGTTGTTG 83
Query 810 CTAT-AAATGCCGCAAACACTTTTGTATTAACTGCAAAGTTCCGTGGCATAGTAACTTGT 868
| | |||||| | ||| |||||| || |||||||||||||||||||||||||||||||
Sbjct 84 -TGTCAAATGCGGTGAACCCTTTTGCATCAACTGCAAAGTTCCGTGGCATAGTAACTTGT 142
Query 869 CGTGCAAGGAACACAAGAG 887
| ||| | || |||||||
Sbjct 143 CATGCGATGATTACAAGAG 161
> Ahg484937 jgi|Araly1|484937|fgenesh2_kg.5__929__AT3G45500.1
Length=440
Score = 73.1 bits (39), Expect = 4e-12
Identities = 106/137 (77%), Gaps = 9/137 (7%)
Strand=Plus/Plus
Query 76 TCATTGGCGGGATTTGGGGTTGCAATTTACAGAG-A-AGAGGATGATAGTATCTTGTTTA 133
|||||||||||||||||||||||||||| | | | | |||| ||||| | |||||||
Sbjct 79 TCATTGGCGGGATTTGGGGTTGCAATTTGCGG-GCATAGAG-ATGATC-T--CTTGTTTC 133
Query 134 AGAAAAAAGTTTCACTTCATTACCCCGACT-TTACAGCTTGGGAGGCTGAGCTTATGGCA 192
|| || | || ||||| | | || | |||| | || ||||||||| ||||| |||
Sbjct 134 AGCTGAATGGACCAATTCATGGCTCGGA-TATTACTGTTTTGGAGGCTGAACTTATAGCA 192
Query 193 TTGAAGCTAGGACTAAC 209
||||||| |||||||||
Sbjct 193 TTGAAGCAAGGACTAAC 209
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45099410811
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5