BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G45630.1
Length=3555
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484947 jgi|Araly1|484947|fgenesh2_kg.5__939__AT3G45630.1 4927 0.0
Ahg358235 jgi|Araly1|358235|fgenesh1_pg.C_scaffold_8002022 1090 0.0
Ahg948121 jgi|Araly1|948121|scaffold_800008.1 828 0.0
> Ahg484947 jgi|Araly1|484947|fgenesh2_kg.5__939__AT3G45630.1
Length=3408
Score = 4927 bits (2668), Expect = 0.0
Identities = 3196/3445 (93%), Gaps = 59/3445 (2%)
Strand=Plus/Plus
Query 15 ttgtctcttgcaatctcccacttctctcaa---tcttcttcatcttccacaatctccgat 71
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1 TTGTCTCTTGCAATCTCCCACTTCTCTCAATCTTCTTCTTCTTCTTCCACAATCTCCGAT 60
Query 72 cgaatct-ctctACTCAGCCGaaaaaaaTGAGTGATTACGGTGAAAAGACTTGCCCTTTG 130
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 CGAATCTCCT-TACTCAGCCGAAAAAAATGAGTGATTACGGTGAAAAGACTTGCCCTTTG 119
Query 131 TGTGCTGAGGAGATGGATTTGACTGACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAG 190
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 TGTGCAGAGGAGATGGATTTGACTGACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAG 179
Query 191 ATTTGTGTTTGGTGCTGGCACCATATAATGGACATGGCAGAGAAAGATCAATCAGAAGGG 250
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 180 ATTTGTGTTTGGTGCTGGCACCACATAATGGACATGGCAGAGAAAGATCAATCAGAAGGG 239
Query 251 CGCTGTCCAGCTTGCCGCACTCCATATGACAAAGAAAAGATTGTTGGGATGACTGTTGAT 310
||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 240 CGCTGTCCAGCTTGCCGTACTCCATATGATAAAGAAAAGATTGTTGGGATGACCGTTGAT 299
Query 311 CAGGAGAGACTGGCCTCTGAAGGCAACATGGATCGCaaaaaaaTACAAAAGTCGAAACCG 370
|| ||||||||| |||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct 300 CAAGAGAGACTGACCTCTGAAGGCAACATGGATCGCAAAAAAACACAAAAGTCAAAATTG 359
Query 371 AAATCTTCTGATGGGAGAAAGCCACTAACAAGTGTCCGAGTGGTTCAAAGAAATCTTGTT 430
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 360 AAATCTTCTGAAGGGAGAAAGCCACTAACAAGTGTCCGAGTGGTTCGAAGAAATCTTGTT 419
Query 431 TACATTGTTGGATTGCCCCTTAATCTAGCAGATGAAGATCTTCTCCAGCGTAAAGAATAT 490
||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || |||
Sbjct 420 TACATTGTTGGGTTGCCCCTTAATCTAGCAGATGAAGATCTTCCCCAGCGTAATGAGTAT 479
Query 491 TTTGGTCAGTATGGAAAGGTTCTAAAGGTTTCGATGTCCCGAACAGCAACAGGTCTCATC 550
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 480 TTTGGTCAGTATGGAAAGGTTCTAAAGGTTTCCATGTCCCGAACAGCAACAGGTCTCATC 539
Query 551 CAACAGTTTCCTAACAACACATGCAGTGTATACATCACATATGGCAAAGAGGAAGAGGCC 610
|||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 540 CAACAGTTCCCTAACAACACATGCAGTGTATATATCACTTATGGCAAAGAGGAAGAGGCT 599
Query 611 ATTCGATGTATTCAGTCTGTTCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGT 670
||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 600 GTTCGATGTATTCAATCTGTCCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGT 659
Query 671 TTTGGGACAACCAAGTATTGCCATGCATGGTTGAGAAACGTGGCATGCAACAATCAGGAT 730
||||||||||| |||||||| ||||||||||| ||||||| | |||||||||||| |||
Sbjct 660 TTTGGGACAACAAAGTATTGTCATGCATGGTTAAGAAACGCGACATGCAACAATCCTGAT 719
Query 731 TGCCTCTATTTGCATGAGGTTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATA 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGCCTCTATTTGCATGAGGTTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATA 779
Query 791 TCAGCCCATACAAGAGTTCAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCA 850
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TCAGCCTATACAAGGGTTCAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCA 839
Query 851 GGGAGCATGCTACCTCCACCATTGGATGCTTATACCAGTGACAGTTCTACTG-GAAATCC 909
||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||
Sbjct 840 GGGAGCATGCTACCTCCACCATTGGATGCTTATGGCAGTGACAGTTCTACTGCG-AATCC 898
Query 910 AATTGCAAAAGTTCCTTCTAGTACTTCAGTTAGTGCTCCTAAGAGTTCCCCACCTAGTGG 969
|||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||
Sbjct 899 AATTGCAAAAGTTCCTTCTACTACTTCAGTTAGTGCTCCTAGGAGTTCTCCACCTAGTGG 958
Query 970 GAGCTCGGGTAAATCAACTGCTCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAA 1029
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 959 GAGCTCTGGTAAATCAACTGCGCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAA 1018
Query 1030 TCAACACTCTTTAGCAACTTCAGCTTTGTCAAATGGATCTTTGGATAATCAAAGATCAAC 1089
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 TCAACACTCTTTAGCAACTTCAGCTTTGTCAAATGGATCTTTGGATAATCAAAGATCAAC 1078
Query 1090 ATCAGAGAATGGAACTTTGGCTACGTCTACAGTTGTTACAAAGGCAGCTAATGGGCCTGT 1149
||||||||||||||||||||||| ||||||||||||| |||| |||||| ||||||||||
Sbjct 1079 ATCAGAGAATGGAACTTTGGCTATGTCTACAGTTGTTGCAAATGCAGCTCATGGGCCTGT 1138
Query 1150 ATCCTCTAGTAACAGTCTTCAGAAAGCACCTCTCAAGGAAGAAATTCAATCATTGGCTGA 1209
| |||||||||||| |||||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct 1139 AACCTCTAGTAACACTCTTCAGAAACCACCTCTTAAGGAAGAAATTCAAACATTGGCTGA 1198
Query 1210 AAAAAGCAAACCTGGTGTGTTGAAGCCTTTGCAGCAGAAGATTGTGTTGGATCCCGAGTC 1269
||||||||| ||| | ||||| |||||||||||||||||||||||||||||| | | |||
Sbjct 1199 AAAAAGCAATCCTAGCGTGTTTAAGCCTTTGCAGCAGAAGATTGTGTTGGATTCTGGGTC 1258
Query 1270 CAAGAGAACTACATCACCTAATAGAGACCCTAGTAGCAATCAGATATCCTGTTTAGTAGA 1329
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 1259 CAAGAGAACTACATCACCTAATAGAGATCCTAGTAGCAATCAGATATCCTGTTTAGAAGA 1318
Query 1330 GTCTTCCTACAATAGCAGAGTCATTGACAAGCCTTCTGCTGTTGAGAATTCTCTTGAACA 1389
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1319 ATCTTCCTACAATAGCAGAGTCATTGACAAGCCTTCTGCTGTTGAGAATTCTTTTGAACA 1378
Query 1390 CACAAGTGAAATTGCTGAAGATGTCTTCGATGTTGGTAAATTGTCTGCTGATGTTGCATG 1449
||||| |||||||||||||||| || |||||||| |||| ||||| ||||||||||||||
Sbjct 1379 CACAAATGAAATTGCTGAAGATTTCCTCGATGTTAGTAACTTGTCGGCTGATGTTGCATG 1438
Query 1450 GATGGGGATAACTACAAATTCTAGGGATGAAACCCCTGGTGTTCCAGTGGTTATCGGTAC 1509
||||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||
Sbjct 1439 GATGGGGATAACTACAAATTCTAGGGATGAAGCTCCTGGTGTTCCAGTGGCTATTGGTAC 1498
Query 1510 TCATTGTGATCTTGGTTCTATTACACAATCTGATAACGATGTACAAAATCTCGAGCAATG 1569
||||||||||| |||||||||| |||| |||||||| ||||||||||||| |||| |||
Sbjct 1499 TCATTGTGATCAAGGTTCTATTAGACAACCTGATAACTATGTACAAAATCTTGAGCGATG 1558
Query 1570 TAGAAAACAGTCTCCTACAAACACTTATGCAGAAGCTGACATATCACTGAATGGAATTCA 1629
||||||| | |||||||||| ||||||||||||||||| |||||||| |||||| |||||
Sbjct 1559 TAGAAAAGATTCTCCTACAACCACTTATGCAGAAGCTGGCATATCACAGAATGGGATTCA 1618
Query 1630 TGGTTCAAGGCCTGAGTGGGATTGGAGATCAGGTTTGCAATCCCAGATAGATGTTAAGGA 1689
|||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 1619 TGGTTCAAGGCCAGAGTGGGATTGGAGATCAGGTTCGCAATCCCAGATAGATGTCAAGGC 1678
Query 1690 ACCGTTGGAAGTCAATGATTTCTCATCATTCAATAACAACA-GACGTGGTA-TTGCAGAG 1747
|| | |||| |||||||||| |||||||||||||||||| | | || ||| ||||||||
Sbjct 1679 ACAGGTGGATGTCAATGATTCCTCATCATTCAATAACAATAAG-CG-GGTTGTTGCAGAG 1736
Query 1748 GCTGTTAGCCACTCGACTTCTAAGTTTAGTTCATCAATCTCAATTCTGGATTCAAATCAT 1807
|||||||||||||| |||| || |||||||||||||| ||||||||||||||||||||||
Sbjct 1737 GCTGTTAGCCACTCCACTTATATGTTTAGTTCATCAAGCTCAATTCTGGATTCAAATCAT 1796
Query 1808 CTAGCTTCTCGTTCGTTCCAGAACCGGGAAACTTCTTGTGGGATGGATTCAAAAACTGGA 1867
|||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||||
Sbjct 1797 CTAGCTTCTCGTTCTTTCCAGACCCGGGAAACTTCTGGTGGGATGGATTCAAATACTGGA 1856
Query 1868 TCCTCCTTTGAAATAGGTAGTGATAGATTGCATCTTCCAAATGGATTTTCTGAGAAAGCT 1927
||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1857 TCCACCTTTGAAATAGGTAGCGATAGTTTGCATCTTCCAAATGGATTTTCTGAGAAAGCC 1916
Query 1928 ATGTCCAATATGGAGCATTCATTATTTGCTAATGAAGGCAGAAGCAACATTCAGAATACA 1987
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 1917 ATATCCAATATGGAGCATTCATTATTTGCTAATGAAGGCAGGAGCAACATTCAGAATGCA 1976
Query 1988 GAGGATGATATCATTTCAAACATTTTAGACTTTGATCCCTGGGATGAATCGTTGACTTCG 2047
||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1977 GAGGATGATATAATTTCGAACATTTTAGACTTTGATCCCTGGGATGAATCCTTGACTTCG 2036
Query 2048 CAACACAATTTTGCAAAATTACTTGGTCAGAGTGATCATAGGGCCAGTACTCTGGAATCT 2107
| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 2037 CCACACAATTTTGCAAAATTACTTGGCCAGAGTGATCATAGGGCTAGTACTCTGGAATCT 2096
Query 2108 TCTAACCTCCTAAAGCAACATAATGACCAGTCTAGGTTCTCTTTTGCTCGGCATGAAGAA 2167
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2097 TCTAACCTCCTAAAGCAACATAATGACCAGTCCAGATTCTCTTTTGCTCGGCATGAAGAA 2156
Query 2168 TCAAATAGTCAAGCGTATGACAATAGAAGTTACAGCATATATGGGCAGTTGTCAAGAGAT 2227
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2157 TCAAATAATCAAGCGTATGACAATAAAAGTTACAGCATATATGGGCAGTTGTCAAGAGAT 2216
Query 2228 CAGCCTCTTCAAGAGTTTGGAGCGAACCGTGATATGTATCAGGATAAGCTTGGCAGTCAA 2287
||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 2217 CAGCCTCTTCAGGAGTTTGGAGTGAACCGTGATATGTATCAGGATAAGCTCGGCAGTCAA 2276
Query 2288 AATGGTTTTGCCTCAAACTATTCCGGTGGATATGAACAATTTGCTACTAGTCCTGGATTA 2347
||||||||||||||||| ||||| || |||||||||||||||||| ||||||||||||||
Sbjct 2277 AATGGTTTTGCCTCAAATTATTCTGGCGGATATGAACAATTTGCTGCTAGTCCTGGATTA 2336
Query 2348 TCTTCTTACAAGAGTCCTGTGGCGAGGACTCAAGTTTCTGCTCCTCCCGGATTTTCTGCT 2407
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2337 TCTTCTTACAAGAGTCCTGTGGCGAGGACTCAAGTTTCTGCTCCTCCTGGATTTTCTGCT 2396
Query 2408 CCCAACAGGTTACCTCCTCCCGGTTTCTCTTCACATCAAAGAGGCGACCTGTCTTCTGAT 2467
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||
Sbjct 2397 CCCAACAGGTTACCTCCTCCGGGTTTCTCTTCACATGAAAGAGCCGACCTGTCTTCTGAT 2456
Query 2468 ATTGCATCAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTA 2527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2457 ATTGCATCAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTA 2516
Query 2528 CCACCTCCAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATT 2587
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CCCCCTCCAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATT 2576
Query 2588 TTAGCTGTTGGAAGGGGAAGACTTCATAATGGGATGGAAACAGCAGACTTTGATTTGAGA 2647
|||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||
Sbjct 2577 TTAGCTGTTGGAAGGGGAAGACTTCACAATGGGATGGAAACAGCAGATTTTGATATGAGA 2636
Query 2648 TCAGGGTTCTCTTCTCAACTGAATTCATTTGATAATGATGCAAGACTCCAATTGTTGGCG 2707
||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||||||
Sbjct 2637 TCAGGGTTCTCTTCTCAGCTGAATTCATTTGAGAACGATGCAAGACTTCAATTGTTGGCG 2696
Query 2708 CAGAGGTCTCTGGCTGCACAACAAGTCAATGGATTTCACGATCCCAGGAACGTAAACAAC 2767
|||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||
Sbjct 2697 CAGAGGTCTCTGGCTGCACAGCAAGTTAATGGATTTCACGATCCCAGGAACGTTAACAAC 2756
Query 2768 TTCTCTTCTTCGTTCTCTGACCCATATGGGATTA---GCTCGAGGCCAACGGATCAAACA 2824
|| |||||| | ||||||||||||||||||||| | ||||||| || ||||||||||
Sbjct 2757 TTTTCTTCTCCACTCTCTGACCCATATGGGATTATTAGTTCGAGGCTAATGGATCAAACA 2816
Query 2825 CAAGGAACTGGCTTGTCTCCTTTCACACAGCTGCCTAGACAAGCTTCAGCAAATCCATTG 2884
|||||| |||| || ||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 2817 CAAGGAGCTGGTTTATCTCCTTTCACACAGTTGCCTAGACAAGCTTCACCAAATCCATTG 2876
Query 2885 TTGTCAAATGGACACTGGGATAATAAGTGGAATGAACCACAAAGTGGTAACAATCTTGGG 2944
||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct 2877 TTGTCAAATGGACACTGGGATAA---GTGGAATGAACCCCAAAGTGGTAACAATCTTGGG 2933
Query 2945 ATTACCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGTTTACAGCGGTTTT 3004
||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 2934 ATTGCCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGCCTACAGCCGTTTT 2993
Query 3005 GAAGAGCCTAAATTCCGGAGGCCCGGTCCTGGAGATCCGTATAACAGAACATACGGGATT 3064
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct 2994 GAAGAGCCTAAATTCCGGAGGCCCAGTCCTGGAGATCCGTACAACAGAACATACGGGATA 3053
Query 3065 TGATTCTCGGAATTCTTCTT-GGTTGGATTTTCACTTAAGACTGTCTCAAAAGAAGGATT 3123
|||||||| ||||||| || |||||||||||| || ||||| |||||||||||||||||
Sbjct 3054 TGATTCTCAGAATTCTGATTTGGTTGGATTTTCTCTCAAGACCGTCTCAAAAGAAGGATT 3113
Query 3124 -TT-TT-GGCTGATTCCGGTGTTGGGAGATTCATAGTCGAAACTGCTCTGCCTATTTGCC 3180
|| || |||||||||| ||||||| ||| ||||||| |||||||||||||||||| |||
Sbjct 3114 GTTGTTTGGCTGATTCCAGTGTTGGAAGAATCATAGTTGAAACTGCTCTGCCTATTAGCC 3173
Query 3181 CATATCAAACCAGACCTTAGAGTCAACAACCGCAAATATCGGCTCCTCCAAAGCAGTTTA 3240
||||||| |||||||||| || ||||||| ||||| ||| |||||| ||||||||||||
Sbjct 3174 CATATCATACCAGACCTTCGAATCAACAATCGCAA-TATTGGCTCCCCCAAAGCAGTTTT 3232
Query 3241 AACTC--AATTGGAGGATA-CCTTACTC-TGTTGGCTTTGTATCAGCAAAAGTTTGATGC 3296
||||| |||||||||| | |||||| | |||||||||||||||||||||| ||||||||
Sbjct 3233 AACTCTCAATTGGAGGACAACCTTAC-CATGTTGGCTTTGTATCAGCAAAAATTTGATGC 3291
Query 3297 TTCAGTGCCTACTCTTGATTCAGAAGGTGATTTTGGTCTACATTTGCATACTATATAAGG 3356
||||| | | | | | |||||| |||||||||||||||| |||||||
Sbjct 3292 TTCAG-----A------A----G--G-TAATTTTGATCTACATTTGCATACTGTATAAGG 3333
Query 3357 CTGAACTAGTGGAAAAAAT-TGGCGCTATGGTGCATTTACCATTTGTATAGA-G--CTTA 3412
|||||||| |||||||| | |||| | | | | |||||||||||||| | | ||
Sbjct 3334 CTGAACTACTGGAAAAA-TCTGGCTC---G-T---T--ACCATTTGTATAGATGAGCCTA 3383
Query 3413 CAAGAACTGTATCAGTCTATGCTTT 3437
||||||| ||||||||||||||||
Sbjct 3384 CAAGAACAATATCAGTCTATGCTTT 3408
> Ahg358235 jgi|Araly1|358235|fgenesh1_pg.C_scaffold_8002022
Length=3006
Score = 1090 bits (590), Expect = 0.0
Identities = 1076/1302 (83%), Gaps = 68/1302 (5%)
Strand=Plus/Plus
Query 98 ATGAGTGATTACGGTGAAAAGACTTGCCCTTTGTGTGCTGAGGAGATGGATTTGACTGAC 157
|||||||| | || || |||||||| || |||||||||| ||||||||| |||| ||
Sbjct 1 ATGAGTGACCATGGAGAGAAGACTTGTCCACTGTGTGCTGAAGAGATGGATCTGACCGAT 60
Query 158 CAGCAATTGAAGCCTTGCAAATGTGGCTATCAGATTTGTGTTTGGTGCTGGCACCATATA 217
|| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct 61 CAACAATTGAAGCCTTGCAAATGTGGCTATCAGATTTGTGTTTGGTGCTGGCATCACATA 120
Query 218 ATGGACATGGCAGAGAAAGATCAA-TCAGAAGGGCGCTGTCCAGCTTGCCGCACTCCATA 276
||||||||||||||||||||||| | ||||||||| ||||||||||| |||||||| ||
Sbjct 121 GTGGACATGGCAGAGAAAGATCAAAT-AGAAGGGCGTTGTCCAGCTTGTCGCACTCCCTA 179
Query 277 TGACAAAGAAAAGATTGTTGGGATGACTGTTGATCAG-GAGAGACTGGCCTCTGAAGGCA 335
|||||||||||| ||||| ||||||||||||||| | || || ||||||||||||||||
Sbjct 180 TGACAAAGAAAAAATTGTAGGGATGACTGTTGATT-GCGACAGTCTGGCCTCTGAAGGCA 238
Query 336 ACATGGATCGCaaaaaaaTACAAAAGTCGAAACCGAAATCTTCTGATGGGAGAAAGC--C 393
| ||||| ||||| || || || ||||| ||| | ||| ||||||| |||||||||| |
Sbjct 239 ATATGGAGCGCAAGAAGATCCAGAAGTCAAAATCAAAACCTTCTGAAGGGAGAAAGCAAC 298
Query 394 A-CTAACAAGTGTCCGAGTGGTTCAAAGAAATCTTGTTTACATTGTTGGATTGCCCCTTA 452
| || || ||||| |||||| | || || |||||||| ||||||||||| ||||| ||||
Sbjct 299 AACTCACCAGTGTGCGAGTGATCCAGAGGAATCTTGTCTACATTGTTGGGTTGCCTCTTA 358
Query 453 ATCTAGCAGATGAAGATCTTCTCCAGCGTAAAGAATATTTTGGTCAGTATGGAAAGGTTC 512
||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||| ||||
Sbjct 359 ATCTAGCCGATGAAGATCTACTCCAACATAAAGAATATTTTGGTCAGTATGGAAAAGTTC 418
Query 513 TAAAGGTTTCGATGTCCCGAACAGCAACAGGTCTCATCCAACAGTTTCCTAACAACACAT 572
|||||||||||||||||||||||||| | ||| |||||||||| || || || || ||||
Sbjct 419 TAAAGGTTTCGATGTCCCGAACAGCATCTGGTGTCATCCAACAATTCCCAAATAATACAT 478
Query 573 GCAGTGTATACATCACATATGGCAAAGAGGAAGAGGCCATTCGATGTATTCAGTCTGTTC 632
|||||||||| || || ||||| |||||||||||||| |||| || |||||| ||||||
Sbjct 479 GCAGTGTATATATTACTTATGGAAAAGAGGAAGAGGCTGTTCGCTGCATTCAGGCTGTTC 538
Query 633 ATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGTTTTGGGACAACCAAGTATTGCC 692
||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| |
Sbjct 539 ATGGGTTTATCTTGGATGGTAAACCACTGAAGGCGTGTTTTGGGACAACCAAATATTGTC 598
Query 693 ATGCATGGTTGAGAAACGTGGCATGCAACAATCAGGATTGCCTCTATTTGCATGAGGTTG 752
|||||||| ||||||| ||||||||| ||||| ||||| || |||||||| |||||||
Sbjct 599 ATGCATGGCTGAGAAATGTGGCATGCGTCAATCCTGATTGTCTGTATTTGCACGAGGTTG 658
Query 753 GCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATATCAGCCCATACAAG-AGT---- 807
| |||||||| ||||| || |||||||||||||||||||||||| ||||||| |||
Sbjct 659 GTTCTCAAGATGATAGCTTCACAAAAGATGAGATCATATCAGCCTATACAAGGAGTAGAG 718
Query 808 T-CAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCAGGGAGCATGCTACCTC 866
| || |||||||||||||||||||||| | |||| ||||||||||||||||||||||||
Sbjct 719 TTCAACAAATCACTGGAGCAACAAATATTCTGCAGCACCGTTCAGGGAGCATGCTACCTC 778
Query 867 CACCATTGGATGCTTATACCAGTGACAGTTC-TACTGGAAATCCAATTGCAAAAGTTCCT 925
||||| ||||||||||| |||||||||||| | ||| ||| |||||| ||| ||||||
Sbjct 779 CACCACTGGATGCTTATTGCAGTGACAGTTCCT-CTGCAAAACCAATTATAAAGGTTCCT 837
Query 926 TCTAGTACTTCAGTTAGTGCTCCTAAG-AGTTCCCCACCTAGTGGGAGCTCGG-G-T--A 980
|| | || | || |||| ||| | | | ||| || ||||||| ||| | || | | |
Sbjct 838 TCAACTAGTGCAACAAGTGTTCCCAGGTA-TTCTCCGCCTAGTGAGAG-TGGGAGCTCTA 895
Query 981 --A-ATCAACTGCTCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAATCAACACT 1037
| ||| |||||||||||||||||||| ||||||||| || | || ||| |
Sbjct 896 GCAGATCCACTGCTCTTCCTGCTGCAGCGTCATGGGGG--AC----A-CA--TCAG---T 943
Query 1038 CTTTAGCAACTTCAGCTTTG-TCAAATGGATCTT-TGGATA-ATCAAAGATCAACATCAG 1094
||||||||||||||| || ||||||||||||| | ||| | ||||||||||||||||
Sbjct 944 CTTTAGCAACTTCAG-TTACCTCAAATGGATCTTCTC-ATATA-CAAAGATCAACATCAG 1000
Query 1095 -AGAATGGAACTTTGGC-TACGTCTACAGTTGTTACAAAGGCAGCTAATGGGCCTGTATC 1152
| |||||||| || | | ||| | |||||| |||| |||||| |||||||||||||
Sbjct 1001 TA-AATGGAACCTTACCCTTT-TCTGCTGTTGTTGCAAACGCAGCTCATGGGCCTGTATC 1058
Query 1153 CTCTAGTAACAGTCTTCAGAAAGCACC-TCTC--AAGGAAGAAATTCAATCATTGGCT-- 1207
||| ||| ||| |||| | |||| ||| |||| || ||||||| ||| || || |
Sbjct 1059 CTCCAGTGACATTCTT-A-AAAG-ACCATCTCGCAAAGAAGAAAGCCAA--AT-GGTTAT 1112
Query 1208 GAAAAAAG-CAAACCTGGTGTGTTGAAGCCTTTGCAGCAGAA-GATTGTG-TTGGATCCC 1264
| | |||| |||| || | ||||||||||| |||||||| || | ||||| || ||
Sbjct 1113 GGACAAAGTCAAAACTAGCGTGTTGAAGCCCTTGCAGCATAATG-TTGTGGTT---TCTG 1168
Query 1265 GAGTCCAAGAGAACTACATCACCTAATAGAGACCCTAGTAGCAATCAGAT-ATCCTGTTT 1323
| |||| |||||||||| |||||| ||||||| |||| |||||||| | | |||| |||
Sbjct 1169 G-GTCCGAGAGAACTACCTCACCTGATAGAGATCCTACTAGCAATC-GTTTATCCAGTTC 1226
Query 1324 AGTAGAGTCTTCCTACAATAGCAGAGTCATTGACAAGCCTTC 1365
|||||| ||||||||| | |||||| ||||||| |||||||
Sbjct 1227 AGTAGACTCTTCCTACGGTGGCAGAGACATTGACCAGCCTTC 1268
Score = 625 bits (338), Expect = 8e-178
Identities = 1013/1324 (77%), Gaps = 106/1324 (8%)
Strand=Plus/Plus
Query 1794 TGGATTCAAATCATCTAGCTTCTCGTTCGTT-CCAGAACC--GGGAAACTTCTTGTGGGA 1850
||||| |||||||| | ||||||||||| || || | || | |||| ||| ||| ||
Sbjct 1739 TGGATACAAATCATATGGCTTCTCGTTC-TTCCCTG--CCTTGTGAAATTTCAGGTGTGA 1795
Query 1851 TGGATTCAAAAACTG-GATCCTCCTTT-GAAATAGGTAGTGATAGATTGCATCTTCCAAA 1908
||||| ||| || | |||| |||| || | ||| |||||||||||||||||||||||
Sbjct 1796 ACGATTC-AAATTTGAGGTCCT-CTTTGGATAGAGGCAGTGATAGATTGCATCTTCCAAA 1853
Query 1909 TGGATTTTCTGAGAAAGCTATGTCCAATATGGAGCATTCAT-TATTTGCTAATGAAGGCA 1967
||||||| ||||| | | || |||| | |||||||||| | | ||||||||||||| ||
Sbjct 1854 TGGATTTGGTGAGAGATCCATATCCAGTGTGGAGCATTC-TCTGTTTGCTAATGAAGACA 1912
Query 1968 G-AAGCAACATTCAG-AATACAGAGGATGATAT-CATTTCAAACATTTT---A---GACT 2018
| || ||| | ||| ||| ||||||| ||| | |||| |||||||| | || |
Sbjct 1913 GGAA-CAA-AGTCAACAATGTAGAGGATCCTATAC-TTTCGAACATTTTGTCACTCGATT 1969
Query 2019 TTGATCCCTGGGATGAATCGTTGACTTCGCAACACAATTTTGCAAAATTACTTGGTCAGA 2078
||||||| ||||||||||| |||||||| | |||||||| ||| | ||||| ||| | |
Sbjct 1970 TTGATCCATGGGATGAATCCTTGACTTCTCCCCACAATTTGGCAGAGTTACTCGGTGA-A 2028
Query 2079 GT-GATCAT-AGGGCCAGTACTCTGGAATCTTCTAACCTCCTAAAGCAACATAATGACCA 2136
|| ||||| | | |||||||| || |||| |||||||||||||||||||| ||||
Sbjct 2029 GTTGATCAGCAAT-CTAGTACTCTTAAACCTTCAAACCTCCTAAAGCAACATAACAACCA 2087
Query 2137 GTCTAGGTTCTCTTTTGCTCGGCATGAAGAATCAAATAGTCAAGCGTATGACAAT-AGAA 2195
|||||| || |||||||| ||| |||||||||| | || |||||| ||||||| | ||||
Sbjct 2088 GTCTAGATTTTCTTTTGCACGGTATGAAGAATCTAGTAATCAAGCATATGACAGTGAGAA 2147
Query 2196 G-TTA-CAGCATATATGGGCAGTTGTCAAGAGATCAGCCTCTTCAAGAGTTTGGAGCGAA 2253
||| || | | ||||||||||| ||||||||||| ||| |||| |||| | || ||
Sbjct 2148 CCTTAGCA-C-T-TATGGGCAGTTTTCAAGAGATCAACCTATTCAGGAGTCAGTAGTGAG 2204
Query 2254 CCGTGATATGTATCAGGA-TAAGCTTGGCAGTCAAAATGGTTTTGCCTCAAACTATTCCG 2312
||| ||||| |||| | | ||| || || || | |||||| ||||| |||||||| | |
Sbjct 2205 CCGAGATATCTATC-GAAATAATCTCGGGAGCCTAAATGGATTTGCTTCAAACTACGCTG 2263
Query 2313 GTGGATATGAACAA-TTTGCTACTAGTCCTGGATTATCTTCTTACAAGAGTCCTGTGGCG 2371
|||||| || | || |||||| |||||||| ||| ||||| |||| | |||||| |
Sbjct 2264 GTGGAT-TGGATAACTTTGCTGCTAGTCCTTTATTCTCTTCGCACAAAAATCCTGTTTC- 2321
Query 2372 AGGACTC-AAGTTTCTGCTCCTCCCGGATTTTCTGCTCCCAACAGGTTACCTCCTCCCGG 2430
| ||| | |||||||||| || || ||||||||||||||||||||| |||||||||| ||
Sbjct 2322 ACGACCCCAAGTTTCTGCACCGCCAGGATTTTCTGCTCCCAACAGGCTACCTCCTCCTGG 2381
Query 2431 TTTCTCTTCACATCAAAGAG-GCGACCTGTCTTCTGATATTGCA-TCAGGAACTCG-TTT 2487
|||||||||||| |||||| | | ||| ||||| |||| ||| | ||||||||| |||
Sbjct 2382 CTTCTCTTCACATGAAAGAGTGGG-CCTATCTTCAGATACCGCACT-AGGAACTCGATTT 2439
Query 2488 ACTTGACTC-AGC-CAATTTGTTGAGGAACGCATATCATGTACCACCTCCAAGT-GGAAA 2544
|||||||| | | | || | | |||||| |||||||| |||||||||||| || || ||
Sbjct 2440 -CTTGACTCTACCTCCATAT-T-GAGGAATGCATATCAAGTACCACCTCCA-GTTGGTAA 2495
Query 2545 TTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATTTTAGCTGTTGGAAGGGG 2604
|| |||| |||| | |||||||| ||| | |||||||||||| ||||||||||||| ||
Sbjct 2496 TTCAAATGGTGCAAGTGATATTGACTTTGTGGATCCTGCAATTCTAGCTGTTGGAAGAGG 2555
Query 2605 AAGACTTCATAATGGGATGGAAACAGCAGACTTTGATTTGAGATCAGGGTTCTCTTCTCA 2664
| || || | ||| |||||||| ||| |||||||||| ||||| || ||
Sbjct 2556 --G-CT-------GG--T--AAAT-GCAGACTTGGATCTGAGATCAGGATTCTCATCACA 2600
Query 2665 ACTGAATTCATTTGATAATGATGCAAGACTCCA-ATTGTTG-GCGCAG-AGGTCTCTGGC 2721
||||||||| ||||| || || || | ||||| || |||| | ||| || || ||| |
Sbjct 2601 ACTGAATTCTTTTGAAAACGAAACAGGGCTCCATAT-GTTGAGA-CAGCAG-TCCCTGTC 2657
Query 2722 T---GCACA--A-CAAGTCAATGGATTTCA-C--GATCCCAGGAACGTAAACAACTTCTC 2772
| ||||| | ||||| ||||| ||||| | |||| ||| |||||| | | | |
Sbjct 2658 TTCTGCACACCAACAAGTTAATGGGTTTCATCATGATCTCAGAAACGTAT-C---T-C-C 2711
Query 2773 TTCTTCGTTCTCTGACCCATATGGGATT-AGCTCGAGGCCAACGGATCAAACACAAGGAA 2831
||| | || | || || ||||| ||| ||| | |||| || |||||||||||| ||||
Sbjct 2712 TTCA-C-TTAAC-GATCCTTATGG-ATTTAGCGCAAGGCTAATGGATCAAACACAGGGAA 2767
Query 2832 CTGGCTTGTCTCCTTTCACACAGCTGCCTAG--A-CAAGCTTCAGCAAATCCATTGTTGT 2888
| |||| ||||||||| ||||||| || || | ||| | || || ||| || | |||
Sbjct 2768 GTAGCTTATCTCCTTTCTCACAGCTCCCAAGGCAACAACCATCTGCGAATTCAATCTTGC 2827
Query 2889 CAAATGGACACTGGGATAATAAGTGGAATGAACCACAAAGTG-GTAACAATCTTGGGATT 2947
| ||||| ||||||||||| |||||||||| ||||||| | |||||| | || ||
Sbjct 2828 CTAATGGTCACTGGGATAA---GTGGAATGAAGGGCAAAGTGTG-AACAATATAGGCATG 2883
Query 2948 ACCCAGCTTCTAAGGAATGAACGGATGGGTTTTAATGACAACGTT-TACAGC---GGTTT 3003
|| | ||||| |||||||||||| |||||||||||| | | || |||| | || |
Sbjct 2884 GCCAATCTTCTTAGGAATGAACGGCTGGGTTTTAATGGGAGC-TTGTACAACAACGGATA 2942
Query 3004 TGAAGAGCCTAAATTCCGGAGGCCCGGTCCTGGAGATCCGTATAACAGAACATACGGGAT 3063
|||||| | |||||||||| || ||||||||||| ||||||||| ||||| |||||
Sbjct 2943 TGAAGAATCGAAATTCCGGATTCCAAGTCCTGGAGATGTGTATAACAGGACATATGGGAT 3002
Query 3064 TTGA 3067
||||
Sbjct 3003 TTGA 3006
> Ahg948121 jgi|Araly1|948121|scaffold_800008.1
Length=698
Score = 828 bits (448), Expect = 0.0
Identities = 587/655 (90%), Gaps = 5/655 (1%)
Strand=Plus/Plus
Query 2416 GTTACCTCCTCCC-GGTTTCTCTTCACATCAAAGAGGCGACCTGTCTTCTGATATTGCAT 2474
||||||||| ||| ||||||||||||||| || ||| ||||||||||||||||||||||
Sbjct 29 GTTACCTCC-CCCTGGTTTCTCTTCACATGAACGAGCCGACCTGTCTTCTGATATTGCAC 87
Query 2475 CAGGAACTCGTTTACTTGACTCAGCCAATTTGTTGAGGAACGCATATCATGTACCACCTC 2534
|||| ||||| || |||||||| ||| |||||||||||| |||||||||| |||||||
Sbjct 88 CAGGGACTCGCTTGCTTGACTCGGCCTCCTTGTTGAGGAACACATATCATGTCCCACCTC 147
Query 2535 CAAGTGGAAATTTGAATGCTGCAGGAGATATTGAGTTTATTGATCCTGCAATTTTAGCTG 2594
||||||| ||||||| || |||| |||||||||||||||||||||||||||||||||||
Sbjct 148 CAAGTGGCAATTTGACCGCCGCAGCAGATATTGAGTTTATTGATCCTGCAATTTTAGCTG 207
Query 2595 TTGGAAGGGGAAGACTTCATAATGGGATGGAAACAGCAGACTTTGATTTGAGATCAGGGT 2654
||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||
Sbjct 208 TTGGAAGGGGAAGACTTCACAGTGGGATGGAAACAGCAGATTTTGATATGAGATCAGGGT 267
Query 2655 TCTCTTCTCAACTGAATTCATTTGATAATGATGCAAGACTCCAATTGTTGGCGCAGAGGT 2714
|||||||||| ||||||| ||||| || ||||||||||| |||||||||||||||||||
Sbjct 268 TCTCTTCTCAGTTGAATTCCTTTGAAAACGATGCAAGACTTCAATTGTTGGCGCAGAGGT 327
Query 2715 CTCTGGCTGCACAACAAGTCAATGGATTTCACGATCCCAGGAACGTAAACAACTTCTCTT 2774
||||||||||||||||||||||||||||||| | || || |||||| |||||||| ||||
Sbjct 328 CTCTGGCTGCACAACAAGTCAATGGATTTCATGTTCTCATGAACGTTAACAACTTTTCTT 387
Query 2775 CTTCGTTCTCTGACCCATATGGGATTAGCTCGAGGCCAACGGATCAAACACAAGGAACTG 2834
|| | |||||||||||||||| ||||| || |||| || ||||||||||||||||||||
Sbjct 388 CTCCACTCTCTGACCCATATGGAATTAGTTCCAGGCTAATGGATCAAACACAAGGAACTG 447
Query 2835 GCTTGTCTCCTTTCACACAGCTGCCTAGACAAGCTTCAGCAAATCCATTGTTGTCAAATG 2894
|||| |||||||||||||| | ||||||||||||||| ||||||| |||||||||||||
Sbjct 448 GCTTATCTCCTTTCACACAATTACCTAGACAAGCTTCACCAAATCCGTTGTTGTCAAATG 507
Query 2895 GACACTGGGATAATAAGTGGAATGAACCACAAAGTGGTAACAATCTTGGGATTACCCAGC 2954
||||||||||||| |||||||||| | |||||||||||||||||||||| | |||||
Sbjct 508 GACACTGGGATAA---GTGGAATGAAACTCAAAGTGGTAACAATCTTGGGACCAACCAGC 564
Query 2955 TTCTAAGGAATGAACGGATGGGTTTTAATGACAACGTTTACAGCGGTTTTGAAGAGCCTA 3014
||||||||||||| |||||||| ||||||||||| || |||||| |||||||||||||||
Sbjct 565 TTCTAAGGAATGACCGGATGGGATTTAATGACAATGTCTACAGCCGTTTTGAAGAGCCTA 624
Query 3015 AATTCCGGAGGCCCGGTCCTGGAGATCCGTATAACAGAACATACGGGATTTGATT 3069
| ||||||||||||||||||||||||| ||| |||||||| || |||||||||||
Sbjct 625 AGTTCCGGAGGCCCGGTCCTGGAGATCAGTACAACAGAACTTATGGGATTTGATT 679
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134267117544
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5