BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G45860.1
Length=2031
Score E
Sequences producing significant alignments: (Bits) Value
Ahg484965 jgi|Araly1|484965|fgenesh2_kg.5__957__AT3G45860.1 2948 0.0
Ahg492548 jgi|Araly1|492548|fgenesh2_kg.7__1981__AT4G23130.2 824 0.0
Ahg889849 jgi|Araly1|889849|Al_scaffold_0007_1835 785 0.0
Ahg895324 jgi|Araly1|895324|Al_scaffold_0006_3320 496 4e-139
Ahg492546 jgi|Araly1|492546|fgenesh2_kg.7__1979__AT4G23180.1 484 8e-136
Ahg492547 jgi|Araly1|492547|fgenesh2_kg.7__1980__AT4G23150.1 390 2e-107
Ahg889852 jgi|Araly1|889852|Al_scaffold_0007_1838 368 8e-101
Ahg889838 jgi|Araly1|889838|Al_scaffold_0007_1824 326 5e-88
Ahg492544 jgi|Araly1|492544|fgenesh2_kg.7__1977__AT4G23210.2 302 9e-81
Ahg329316 jgi|Araly1|329316|fgenesh1_pm.C_scaffold_7001543 206 7e-52
> Ahg484965 jgi|Araly1|484965|fgenesh2_kg.5__957__AT3G45860.1
Length=2037
Score = 2948 bits (1596), Expect = 0.0
Identities = 1898/2044 (93%), Gaps = 20/2044 (1%)
Strand=Plus/Plus
Query 1 ATGtctttcttctggctttttccttttctccttcatctttcatttgccgattccttatct 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1 ATGTCTTTCTTCTGGCTTTTTCCTTTTCTCCTTCATCTTTCATTTGCCTATTCCTTATCT 60
Query 61 cctctttcAGCTCCAGTTCAAAATTTTATTCACCTAAACCATTCTTGTCCAAGTA--GT- 117
||| |||||||| || ||||||||||||| || ||||| ||||||||||| ||| |
Sbjct 61 TCTCCTTCAGCTCTAGCTCAAAATTTTATTTACATAAACTATTCTTGTCCAGGTACTATA 120
Query 118 ATATTAACGTATTCAAGAAACAGCACTTACTTCACCAATCTCAAAACACTTTTGTCCTCT 177
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 121 ATATTATCGTATTCAAGAAACAGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCT 180
Query 178 CTCTCTTCCCGGAACGCTTCATACTCTACCGGATTCCAAACTGCCACGGCGGGACAAGCT 237
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 181 CTCTCTTCCCGGAACGCTTCATACTCTTCCGGATTCCAAACTGCCACGGCGGGACAAGC- 239
Query 238 CCC-GACCGTGTCACCGGACTTTTCCTTTGTCGCGGAGACGTCTCACAAGAAGTTTGCCG 296
||| ||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 240 CCCTGACCGGGTTACCGGACTTTTCCTTTGTCGTGGAGACGTCTCCCAAGAAGTTTGCCG 299
Query 297 TAACTGCGTCGCCTTTTCCGTCAAGGAGACTTTATATTGGTGTCCGTATAACAAAGAAGT 356
||||||||||||||||||||| || ||||| ||| ||| | |||| ||| |||||||||
Sbjct 300 TAACTGCGTCGCCTTTTCCGTTAACGAGACGTTAGATTTCTTTCCGAATAGCAAAGAAGT 359
Query 357 CGTGCTTTATTACGATGAGTGTATGCTTAGATACTCTCACCGAAATATTCTCTCGACCGT 416
|||||| ||||||||||||| |||||| |||||||||||||| |||||||||||||||||
Sbjct 360 CGTGCTCTATTACGATGAGTATATGCTCAGATACTCTCACCGCAATATTCTCTCGACCGT 419
Query 417 TACATACGATGGAAGTGCTATCTTGTTGAACGGCGCTAATATTTCATCAAGTAATCAAAA 476
||||||| ||||||||||||||||||||||||| | |||||||||||||| |||||||||
Sbjct 420 TACATACAATGGAAGTGCTATCTTGTTGAACGGTGTTAATATTTCATCAACTAATCAAAA 479
Query 477 TCAAGTAGATGAGTTTAGGGATTTGGTGTCGTCCACGTTGAACCTAGCTGCCGTTGAAGC 536
||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 480 TCAAGTAGACCAGTTCAGGGATTTGGTGTCGTCCACGTTGAACCAAGCTGCCGTTGAAGC 539
Query 537 AGCGAATAGTTCTAAAAAATTTTATACGAGAAAGGTCATCACACCCCAGCCTTTGTACTT 596
||| || | ||||||||| |||||||||||||||||||||| ||| ||| | ||||||||
Sbjct 540 AGCCAACAATTCTAAAAAGTTTTATACGAGAAAGGTCATCATACCACAGACATTGTACTT 599
Query 597 GTTAGTTCAGTGCACACCTGATCTTACAAGACAAGACTGTTTACGTTGCCTACAAAAATC 656
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 GTTAGTTCAGTGCACTCCTGATCTTACAAGACAAGACTGTTTACGTTGCCTACAAAAATC 659
Query 657 CATCAAGGGAATGTCTCTTTACAGAATTGGAGGAAGAtttttttACCCTAGTTGTAATTC 716
|||||| |||||| |||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 660 CATCAATGGAATGCCTCTTTACCTAATTGGAGGAAGATTTCTTTACCCTAGTTGTAATTC 719
Query 717 AAGGTACGAGAATTACTCGTTCTACAATGAAACCGCCACTAGATCATCATCACCACCGTC 776
|||||| |||| |||| |||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 720 AAGGTATGAGATTTACGCGTTCTACAATGAAACCGCCACTAGAACATCACCACCACCGTC 779
Query 777 TCTTCCGCCTCGCTCTACTCCTCAACAGCAGCTGAAGTTAGCTCCCCCACCGCTGATTTC 836
||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 780 TCTGCCGCCTGGCTCTACTCCTCAACAGCAGCTGAAGTTAGCTCCCCCACCGCAGATTTC 839
Query 837 AGA-ACGTGGAAAAGGCCGG-AACTCCTCTG---TAATCATCGTTGTTGTTGTTCCAATC 891
| | ||||||||||| || |||||||||| ||||||||| ||||||||||| | ||
Sbjct 840 A-ATCCGTGGAAAAGG-GGGAAACTCCTCTGTCATAATCATCGCTGTTGTTGTTCTATTC 897
Query 892 ATTGCT-CTCCTGCT--TCTGTTCGTAGCT-TTCTTTAGTCTCCGGGCTAAGAAAACAAG 947
| || | || | | ||| || |||||| || ||| || | ||||||||||||||||
Sbjct 898 ACTG-TCCTTTTTATAATCT-TT-GTAGCTGTT-TTTTGTTTTCGGGCTAAGAAAACAAA 953
Query 948 GACGAATTATGAGAGGGAACCACTTACCGAAGAAAGTGATGATATTACCACTGCGGGCTC 1007
|||| || |||||||||||||||||| |||||||||||||||||||| |||||||| ||
Sbjct 954 CACGACTTTTGAGAGGGAACCACTTACTGAAGAAAGTGATGATATTACTACTGCGGGGTC 1013
Query 1008 ACTTCAGTTTGATTTTAAAGCAATTGAGGCAGCAACAAATAAGTTTTGTGAGACTAACAA 1067
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 ACTTCAGTTTGATTTCAAGGCAATTGAGGCAGCAACAAATAAGTTTTGTGAGACTAACAA 1073
Query 1068 ACTTGGTCAAGGTGGTTTCGGCGAAGTTTACAAGGGTATATTTCCTAGTGGAGTACAAGT 1127
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1074 ACTTGGTCAAGGAGGTTTCGGCGAAGTTTACAAGGGTACATTTCCTAGTGGAGTACAAGT 1133
Query 1128 TGCAGTGAAGAGGTTATCCAAGACATCAGGACAAGGTGAAAGAGAGTTCGCAAACGAAGT 1187
||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct 1134 TGCAGTGAAGAGGCTATCGAAGACATCAGGACAAGGTGAAAGAGAGTTCGAAAACGAAGT 1193
Query 1188 TATTGTTGTGGCAAAGCTTCAACATAGAAATTTGGTAAGATTGCTAGGGTTTTGTTTGGA 1247
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1194 TGTTGTTGTGGCAAAGCTTCAACATAGAAATTTGGTAAGATTGCTAGGGTTTTGTTTGGA 1253
Query 1248 AAGAGATGAGAGGATACTTGTCTATGAGTTTGTTCCCAACAAAAGTCTCGACTACTTCAT 1307
||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |
Sbjct 1254 AAGAGATGAGAGGATACTTGTCTATGAGTTTGTGCCCAACAAAAGTCTCGACCACTTCCT 1313
Query 1308 TTTTGACTCTACCATGCAAAGCCTGCTGGACTGGACTAGACGGTACAAAATCATTGGAGG 1367
||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1314 CTTTGACTCTACGATGCAAAGCCTGCTGGATTGGACTAGACGATACAAAATCATTGGAGG 1373
Query 1368 AATTGCTAGAGGGATTCTTTATCTTCATCAAGATTCACGACTCACAATCATACATCGTGA 1427
|||||||||||| |||||||||||||||||||||||||| || || ||||||||||||||
Sbjct 1374 AATTGCTAGAGGAATTCTTTATCTTCATCAAGATTCACGGCTTACGATCATACATCGTGA 1433
Query 1428 TCTCAAAGCAGGTAATATCCTCCTTGGTGATGATATGAATGCAAAAATCGCCGACTTTGG 1487
||||||||||||||||| ||||||| || ||||||||| ||||||||||||||||||||
Sbjct 1434 CCTCAAAGCAGGTAATATTCTCCTTGATGCTGATATGAACGCAAAAATCGCCGACTTTGG 1493
Query 1488 AATGGCGAGAATTTTCGGAATGGACCAAACGGAAGCCAATACTAGGAGAATAGTTGGAAC 1547
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 AATGGCGAGAATTTTCGAAATGGACCAAACGGAAGCCAATACTAGGAGAATAGTTGGAAC 1553
Query 1548 ATATGGCTATATGTCTCCCGAGTATGCGATGTATGGCCAATTCTCCATGAAATCAGATGT 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 ATATGGCTATATGTCTCCCGAGTATGCGATGTATGGCCAATTCTCCATGAAATCAGATGT 1613
Query 1608 GTATAGCTTCGGGGTCTTGGTTCTCGAAATTATAAGTGGGAAAAAGAACAGCAATGTCTA 1667
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1614 GTATAGCTTCGGGGTCTTAGTTCTTGAAATTATAAGTGGGAAAAAGAACAGCAATGTCTA 1673
Query 1668 TCAAATGGATGGTACTAGTGCTGGCAATTTGGTTACATATACTTGGAGACTATGGAGCAA 1727
||| | ||| || |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1674 CCAATTCGATAGTGCTAGTGCTGGAAATTTGGTTACATATACTTGGAGACTATGGAGCAA 1733
Query 1728 TGGGTCACCGTTAGAGCTAGTGGATCCATCCTTTCGTGATAACTATCGAATAAATGAAGT 1787
||| ||||| |||||||| |||||||||||||||| |||||||||| ||||||| |||||
Sbjct 1734 TGGATCACCATTAGAGCTTGTGGATCCATCCTTTCATGATAACTATAGAATAAACGAAGT 1793
Query 1788 TTCGAGATGCATCCATATCGCTTTACTATGTGTTCAAGAAGAAGCTGAAGATCGTCCAAC 1847
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 TACCCGATGCATCCATATCGCTTTACTATGTGTTCAAGAAGAAGCTGAAGATCGTCCAAC 1853
Query 1848 CATGTCAGCTATTGTCCAGATGCTCACTACTAGCTCAATTGCTCTCGCAGTTCCTCAACG 1907
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1854 CATGTCAGCTATTGTCCAGATGCTCACTACTAGCTCAATGGCTCTCGCGGTTCCTCAACG 1913
Query 1908 ACCTGGTTTTTTCTTCCGGAGTAGTAAACATGAACAAGTAGGATTAGTGGATCGTCTATC 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 ACCTGGTTTTTTCTTCCGGAGTAGTAAACATGAACAAGTAGGATTAGTGGATCGTCTATC 1973
Query 1968 TATCAATACGTCCGCTCTTTGTTCAGTCGATGATGCTTCCATTACTAATGTAACTCCTCG 2027
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 1974 TATCAATACGTCCGCTCTCTATTCAGTCGATGATGCTTCCATTACTAATGTAACTCCTCG 2033
Query 2028 TTGA 2031
||||
Sbjct 2034 TTGA 2037
> Ahg492548 jgi|Araly1|492548|fgenesh2_kg.7__1981__AT4G23130.2
Length=2044
Score = 824 bits (446), Expect = 0.0
Identities = 799/965 (83%), Gaps = 41/965 (4%)
Strand=Plus/Plus
Query 985 GATGATATTACCACTGC-GGGCTCACTT-CAGTTTGATTTTAAAGCAATTGAGGCAGCAA 1042
||||| ||||| ||||| ||| ||| || |||||||||||||| | ||||| || || |
Sbjct 964 GATGACATTACAACTGCAGGG-TCA-TTGCAGTTTGATTTTAAGGTTATTGAAGCTGCGA 1021
Query 1043 CAAATAAGTTTTGTGA-GACTAACAAACTTGGTCAAGGTGG-TTTCGG-CGAAGTTTACA 1099
|| ||||||||| || | ||||||||| ||||||||||| ||| || | |||||||||
Sbjct 1022 CAGATAAGTTTT-CGATGTGTAACAAACTCGGTCAAGGTGGATTT-GGAC-AAGTTTACA 1078
Query 1100 AGGGTATA-TTTCCTAGTGGAGTACAAGTTGCAGTGAAGAGGTTATCCAAGACATCAGGA 1158
|||| ||| ||| ||| |||| |||||||||| |||||||| |||| || |||||||||
Sbjct 1079 AGGGCATACTTT-CTAATGGATTACAAGTTGCGGTGAAGAGACTATCGAAAACATCAGGA 1137
Query 1159 CAAGGTGAAAGAGAGTTCGCA-AACGAAGTTATTGTTGTGGCAAAGCTTCAACATAGAAA 1217
|||||||||| ||||||| | ||||||||| ||||||||||||||||||| || |||||
Sbjct 1138 CAAGGTGAAAAAGAGTTC-AAGAACGAAGTTGTTGTTGTGGCAAAGCTTCAGCACAGAAA 1196
Query 1218 T-TTGGT-AAGATTGCTAGGGTTTTGTTTGGAAAGAGATGAGAGGATACTTGTCTATGAG 1275
| || || ||| || || || |||||||| || || || |||| ||||||||||| |||
Sbjct 1197 TCTT-GTCAAGCTT-CTTGGATTTTGTTTAGAGAGGGAAGAGAAAATACTTGTCTACGAG 1254
Query 1276 TTTGT-TCCCAACAAAAGTCTCGACTACTTCATT-TTTGACTCTACCATGCAAAGCCTGC 1333
||||| | | || |||||||| || |||||| || ||||| |||| ||||| |||| ||
Sbjct 1255 TTTGTGT-CTAATAAAAGTCTTGATTACTTC-TTGTTTGATTCTAGAATGCAGAGCCAGC 1312
Query 1334 TGGACTGGACTAGACGGTACAAAATCATTGGAGGAATTGCTAGAGGGATTCTT-TATCTT 1392
| || ||||||| | |||| || ||||| ||||||||||||||| ||| | || |||||
Sbjct 1313 TAGATTGGACTACAAGGTATAAGATCATAGGAGGAATTGCTAGA-GGAATATTGTATCTC 1371
Query 1393 CATCAAGATTCACGACTCACAATCATACATCGTGATCTCAAAGCAGGTAATATCCTCCTT 1452
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||
Sbjct 1372 CATCAAGATTCACGACTCACAATCATACATCGTGACCTCAAAGCGGGTAACATCCTC-TT 1430
Query 1453 GGT-GATGATATGAATGCAAAAATCGCCGACTTTGGAATGGCGAGAATTTTCGGAATGGA 1511
|| | ||||||||| ||||| | || || |||||||||||||| ||||||| ||||||
Sbjct 1431 GGACGCTGATATGAACCCAAAAGTTGCAGATTTTGGAATGGCGAGGATTTTCGAAATGGA 1490
Query 1512 CCAAACGGAAGCCAATACTAGGAGAATAGTTGGAACATATGGCTATATGTCTCCCGAGTA 1571
|||||| |||||| |||| || ||| |||| ||||| ||||| || ||||||||||||||
Sbjct 1491 CCAAACAGAAGCCCATACGAGAAGAGTAGTCGGAACCTATGGTTACATGTCTCCCGAGTA 1550
Query 1572 TGCGATGTATGGCCAATTCTCCATGAAATCAGATGTGTATAGCTTCGGGGTCTTGGTTCT 1631
|||||||||||||||||| || |||||||| ||||| ||||||||||| ||||| |||||
Sbjct 1551 TGCGATGTATGGCCAATTTTCAATGAAATCTGATGTTTATAGCTTCGGAGTCTTAGTTCT 1610
Query 1632 CGAAATTATAAGTGGGAA-AAAGAACAGCAATGTCTATCAAATGGATGGTACTAGTGCTG 1690
|| || ||||| ||||| ||| ||||||| ||||||| ||||||| || | | | |
Sbjct 1611 TGAGATAATAAGCGGGAAGAAA-AACAGCAGCCTCTATCAGATGGATGCTAGTT-T-C-G 1666
Query 1691 GCAATTTGGTTACATATACTTGGAGACTATGGAGCAATGGGTCACCGTTAGAGCTAGTGG 1750
| || ||||||||||||||||||||||||||||| | |||||||| ||||||| ||||
Sbjct 1667 GAAACTTGGTTACATATACTTGGAGACTATGGAGTGACGGGTCACCACTAGAGCTCGTGG 1726
Query 1751 ATCCATCCTTTCGT-GATAACTATCGAATAAATGAAGT--TTCGAGATGCATCCATATCG 1807
|| | ||||||| | || || |||| || ||| ||||| || |||||||||||||| |
Sbjct 1727 ATTCGTCCTTTC-TAGAGAATTATCAAAGAAACGAAGTAATT--AGATGCATCCATATTG 1783
Query 1808 CTTTACTATGTGTTCAAGAAGA-AGCTGAAGATCGTCCAACCATGTCAGCTATTGTCCAG 1866
||||| ||||||| |||||||| | ||||| ||||||||||||||||||| || || ||
Sbjct 1784 CTTTATTATGTGTCCAAGAAGATA-CTGAAAATCGTCCAACCATGTCAGCGATCGTACAA 1842
Query 1867 ATGCTCACTACTAGCTCAATTGCTCTCGCA-GTTCCTCAACGACCTGGTTTTTTCTTCCG 1925
||||| ||||||||||| || || || | | || ||||||| |||||| |||||||||||
Sbjct 1843 ATGCTTACTACTAGCTCGATCGCCCTAG-ATGTACCTCAACCACCTGGATTTTTCTTCCG 1901
Query 1926 GAGTA 1930
|||||
Sbjct 1902 GAGTA 1906
> Ahg889849 jgi|Araly1|889849|Al_scaffold_0007_1835
Length=2016
Score = 785 bits (425), Expect = 0.0
Identities = 788/961 (82%), Gaps = 33/961 (3%)
Strand=Plus/Plus
Query 985 GATGATATTACCACTGCGGGCTCACTTCAG-TTTGATTTTAAAGCAATTGAGGCAGCAAC 1043
||||||||| | || || ||||| || ||| |||| |||||| | |||| || || ||
Sbjct 988 GATGATATTTCAACGGCAGGCTCCCTGCAGTTTTG-TTTTAAGGTTGTTGAAGCTGCGAC 1046
Query 1044 AAATAAGTTTTGTGAGA-CTAACAAACTTGGTCAAGGTGGTTTCGG-CGAAGTTTACAAG 1101
||||||||||| | | ||||||||| ||||||||||| ||||| | |||||||||||
Sbjct 1047 AAATAAGTTTT-CAATATGTAACAAACTCGGTCAAGGTGGATTCGGAC-AAGTTTACAAG 1104
Query 1102 GGTATATTTCCTAGTGGAGTACAAGTTGCAGTGAAGAGGTTATCCAAGACATCAGGACAA 1161
|| | | |||||| ||||||||||||||| |||||||| |||| || ||||| ||||||
Sbjct 1105 GGCACACTTCCTAATGGAGTACAAGTTGCCGTGAAGAGACTATCGAAAACATCGGGACAA 1164
Query 1162 GGTGAAAGAGAGTTCGCA-AACGAAGTTATTGTTGTGGCAAAGCTTCAACATAGAAATTT 1220
||||||| ||||||| | ||||| ||| |||||||||| |||||||| || |||||| |
Sbjct 1165 GGTGAAAAAGAGTTC-AAGAACGAGGTTGTTGTTGTGGCCAAGCTTCAGCACAGAAATCT 1223
Query 1221 GGT-AAGATTGCTAGGGTTTTGTTTGGAAAGAGATGAGAGGATACTTGTCTATGAGTTTG 1279
||| ||| || || || |||||||| |||||||| |||| ||||||||||| |||||||
Sbjct 1224 GGTCAAGCTT-CTTGGATTTTGTTTTGAAAGAGAAGAGAAAATACTTGTCTACGAGTTTG 1282
Query 1280 T-TCCCAACAAAAGTCTCGACTACTTCATT-TTTGACTCTACCATGCAAAGCCTGCTGGA 1337
| | | || ||||| || || |||||| || |||||||||| | ||| |||| ||||||
Sbjct 1283 TGT-CTAATAAAAGCCTTGATTACTTC-TTGTTTGACTCTAAAAAGCAGAGCCAGCTGGA 1340
Query 1338 CTGGACTAGACGGTACAAAATCATTGGAGGAATTGCTAGAGGGATTCTT-TATCTTCATC 1396
||||||| |||||| || ||||| ||||||||| ||||| ||| | || ||||| ||||
Sbjct 1341 TTGGACTACACGGTATAAGATCATAGGAGGAATTTCTAGA-GGAATATTGTATCTCCATC 1399
Query 1397 AAGATTCACGACTCACAATCATACATCGTGATCTCAAAGC-AGGTAATATCCTCCTTGG- 1454
|||||||||||||||||||||||||||| || |||||||| || ||| |||||| ||||
Sbjct 1400 AAGATTCACGACTCACAATCATACATCGAGACCTCAAAGCGAG-TAACATCCTC-TTGGA 1457
Query 1455 TGATGATATGAATGCAAAAATCGCCGACTTTGGAATGGCGAGAATTTTCGGAATGGACCA 1514
|| ||||||||| | ||||| || || ||||||||||| |||||||| |||||||||||
Sbjct 1458 TGCTGATATGAACCCGAAAATTGCTGATTTTGGAATGGCAAGAATTTTTGGAATGGACCA 1517
Query 1515 AACGGAAGCCAATACTAGGAGAATAGTTGGAACATATGGCTATATGTCTCCCGAGTATGC 1574
||| ||||||||||| || ||| |||||||||| ||||| || ||||| || ||||||||
Sbjct 1518 AACAGAAGCCAATACGAGAAGAGTAGTTGGAACCTATGGTTACATGTCACCTGAGTATGC 1577
Query 1575 GATGTATGGCCAATTCTCCATGAAATCAGATGTGTATAGCTTCGGGGTCTTGGTTCTCGA 1634
||||| ||||||||||| |||||||| ||||| |||||||| || ||||| ||||| ||
Sbjct 1578 CATGTACGGCCAATTCTCAATGAAATCTGATGTCTATAGCTTTGGAGTCTTAGTTCTTGA 1637
Query 1635 AATTATAAGTGGGAAAAAGAACAGCAATGTCTATCAAATGGATGGTACTAGTGCTGGCAA 1694
|||||||| |||| |||||||||| ||||||| ||||||| | | || ||| ||
Sbjct 1638 GATTATAAGCGGGAGGAAGAACAGCAGCCTCTATCAGATGGATGCT--T-GTT-TGGGAA 1693
Query 1695 T-TTGGTTACATATACTTGGAGACTATGGAGCAATGGGTCACCGTTAGAGCTAGTGGATC 1753
|||||||||||||||||||| ||||||| ||||| | | || |||||||| ||||||
Sbjct 1694 ACTTGGTTACATATACTTGGAGGCTATGGACCAATGAGACGCCATTAGAGCTCGTGGATT 1753
Query 1754 CATCCTTTCGTGATAACTATCGAATAAATGAAGT--TTCGAGATGCATCCATATCGCTTT 1811
| |||||||| | || |||| || ||| ||| | || ||||||||||||||||| ||
Sbjct 1754 CGTCCTTTCGAAAGAATTATCAAAGAAACGAAATAATT--AGATGCATCCATATCGCCTT 1811
Query 1812 ACTATGTGTTCAAGAAGA-AGCTGAAGATCGTCCAACCATGTCAGCT-ATTGTCCAGATG 1869
| |||||||||||||||| | ||||| |||||||||| |||||| | || || || |||
Sbjct 1812 ATTATGTGTTCAAGAAGATA-CTGAATATCGTCCAACTATGTCAA-TGATCGTTCAAATG 1869
Query 1870 CTCACTACTAGCTCAATTGCTCTCGCAGTTCCTCAACGACCTGGTTTTTTCTTCCGGAGT 1929
|| ||||||||||| ||| | || || | ||||||| ||||||||||||||||||||||
Sbjct 1870 CTTACTACTAGCTCGATTTCCCTAGCTGCACCTCAACCACCTGGTTTTTTCTTCCGGAGT 1929
Query 1930 A 1930
|
Sbjct 1930 A 1930
> Ahg895324 jgi|Araly1|895324|Al_scaffold_0006_3320
Length=2007
Score = 496 bits (268), Expect = 4e-139
Identities = 750/976 (77%), Gaps = 59/976 (6%)
Strand=Plus/Plus
Query 984 TGATGATATTACCACTGC-GGGCTCACTTCAGTTTGATTTTAAAG-CAATTGAGGCAGCA 1041
|||||||||||| | | | | || || || ||||| ||| ||| ||||||| || |||
Sbjct 963 TGATGATATTACAAGTCCACAG-TCTCTGCAATTTGA-TTTCAAGACAATTGAAGCGGCA 1020
Query 1042 ACAAATAAGTTTT--GTGAGACTAACAAACTTGGTCAAGGTGG-TTTCGGCGAAGTTTAC 1098
|| |||| |||| | || || |||||| | ||||||||||| ||| || |||||||||
Sbjct 1021 ACTGATAAATTTTCGGGGA-AC-AACAAAGTCGGTCAAGGTGGATTT-GGTGAAGTTTAC 1077
Query 1099 AAGGGTATATT-TCCTAG-TGG-AGTACAAGTTGCAGTGAAGAGGTTATCCAAGACA-TC 1154
||||| | ||| | | || ||| | | ||||||| |||||| | ||| ||| | | ||
Sbjct 1078 AAGGGAAGATTAT-C-AGATGGAACT-GAAGTTGCCGTGAAGCGACTAT-CAAAAAATTC 1133
Query 1155 AGGACAAGG-TGAAAGAGAGTTCGCA-AACGAAGTTATTGTTGTGGCAAAGCTTCAACAT 1212
||||||||| | | | |||||| | || || ||| || ||||||| ||||||||||||
Sbjct 1134 AGGACAAGGCTCACA-AGAGTT-TAAGAATGAGGTTGTTCTTGTGGCGAAGCTTCAACAT 1191
Query 1213 AGAAAT-TTGGTAAGATTGCTAGGGTTTTGTTTGGAAAGAGATG-AGAGGATACTTGTCT 1270
|||||| ||| || | || || |||||||| |||||| |||| | | | |||||||||||
Sbjct 1192 AGAAATCTTGTTAGGCTT-CTTGGGTTTTGCTTGGAAGGAGAAGAACA-GATACTTGTCT 1249
Query 1271 ATGAGTTTGTTCCCAACAAAAGTCTCGACTACTTCATTTTTGACTCTACCATGCAAAGCC 1330
||||||||||||||||||| || || || || ||| | || ||| | || | | | |
Sbjct 1250 ATGAGTTTGTTCCCAACAAGAGCCTTGATTATTTCCTCTTCGACCCAACAAAACGTCGAC 1309
Query 1331 TGCTGGACTGGACTAGACGGTACAAAATCATTGGAGGAATTGCTAGAGGGATTCTTTATC 1390
|| || ||| ||||||||||| ||||||||||| |||||| |||||||||| ||||
Sbjct 1310 AACTAGATTGGGGAAGACGGTACAATATCATTGGAGGGATTGCTCGAGGGATTCTCTATC 1369
Query 1391 TTCATCAAGATTCACGACTCACAATCATACATCGTGATCTCAAAGC-AGGTAATATCCTC 1449
|||||||||||||||| |||||||||||||| |||||||||||||| || || || ||
Sbjct 1370 TTCATCAAGATTCACGGCTCACAATCATACACCGTGATCTCAAAGCGAGC-AACATTCTT 1428
Query 1450 CTTGGTGATGATATGAATGCAAAAATCGCCGACTTTGGAATGGCGAG-AATTTTCGGAAT 1508
|| | |||||||||||| | ||||| || || ||||| ||||| || ||||| ||| ||
Sbjct 1429 CTAGATGATGATATGAACCCGAAAATAGCGGATTTTGGCATGGCAAGGAATTT-CGGGAT 1487
Query 1509 GGACCAAACG-GAAGCCAATACTAGGAGAATAGTTGGAACATAT-GGCTATATGTCTCCC 1566
||| ||||| || ||||||||||| | ||||| |||||| | | || || ||| |||||
Sbjct 1488 GGAGCAAACTCGA-GCCAATACTAGCAAAATAGCTGGAACCT-TCGGTTACATGGCTCCC 1545
Query 1567 GAGTATGCGATGTATGGCCAATTCTCCATGAAATCAGATGTGTATAGCTTCGGGGTCTTG 1626
||||||| |||| | || ||||| ||||||||||| ||| | ||||||||||| || |||
Sbjct 1546 GAGTATGTGATGCACGGTCAATTTTCCATGAAATCTGATATCTATAGCTTCGGAGTGTTG 1605
Query 1627 GTTCTCGAAATTATAAGTGGGAAAAAGAACAGCAA-TGTCTATCAAATG-GATGGTACTA 1684
||||| || ||||||||||| || | ||| || | | |||||||| | ||||| | |
Sbjct 1606 GTTCTTGAGATTATAAGTGGTAAGATGAATAGTAGCT-TCTATCAA-TCAGATGG-A-TC 1661
Query 1685 GTGCTGGCAATTTGGTTACATATACTTGGAGACTATGGAGCAATGGGTCACCGTTAGAGC 1744
|||||||||||| || ||| || |||||||||||||||| || || || || ||||| |
Sbjct 1662 -TGCTGGCAATTTAGTAACACATGCTTGGAGACTATGGAGAAAAGGTTCGCCTTTAGAAC 1720
Query 1745 TAGTGGA-TCCATCCT-TTCGT-GATAACTATC-GAATAAATGAAGTTTCGAGATGCATC 1800
| |||| || | | | || | | || |||| || | ||||||| | ||||||||
Sbjct 1721 TCTTGGACTCGA-C-TATT-GAAGGGAATTATCAGAGCGA-TGAAGTTACAAGATGCATT 1776
Query 1801 CATATCGC--TTTACTATGTGTTCAAGAAGAAGCTGAAGATCGTCCAACCATGTC-AGCT 1857
|||||||| ||| ||||||| ||||| || ||||| ||||||||| ||||| | |
Sbjct 1777 CATATCGCGCTTT--TATGTGTGCAAGAGGATCCTGAAAATCGTCCAATGATGTCTA-CA 1833
Query 1858 ATTGTCCAGATGCTCACTACTAGCTCAATTGCTCTCGCA-GTTCCTCAA-CGACCTGGTT 1915
||| | ||||||||||| || | |||| || | || || |||| | ||||| ||
Sbjct 1834 ATTATTTTGATGCTCACTAGTAACACAATCACTTTA-CAAGTGCCTCGTGC-ACCTGCTT 1891
Query 1916 TTTTCTTCCGGAGTAG 1931
||||||||| |||||
Sbjct 1892 TTTTCTTCCAAAGTAG 1907
> Ahg492546 jgi|Araly1|492546|fgenesh2_kg.7__1979__AT4G23180.1
Length=2181
Score = 484 bits (262), Expect = 8e-136
Identities = 707/916 (77%), Gaps = 54/916 (6%)
Strand=Plus/Plus
Query 985 GATGATATTACCACTGCGGGCTCACTTCAGTTTGATTTTA-AAGCAATTGAGGCAGCAAC 1043
||||||||||| ||||| | |||||| ||| |||||| || || |||| | | |||||
Sbjct 1032 GATGATATTACAACTGCAGACTCACTGCAGCTTGATTATAGAA-AAATTCAAACTGCAAC 1090
Query 1044 AAATAAGTTTTG-TGAGACTAACAA-ACTTGGTCAAGGTGG-TTTCGGCGAAGTTTACAA 1100
| || | ||||| |||| ||| || | ||||||||||||| ||| || || ||||||||
Sbjct 1091 AGATGA-TTTTGCAGAGAGTAATAAGA-TTGGTCAAGGTGGATTT-GGTGAGGTTTACAA 1147
Query 1101 GGGTA-TATT-TCCTAGT-GGAGTACAAGTTGCAGTGAAGAGGTTATCCAAGACATCAGG 1157
||||| | || || | | ||| | ||||||| |||||||| |||| ||| ||||||
Sbjct 1148 GGGTACT-TTATCGGA-TGGGACT-GAAGTTGCGGTGAAGAGACTATCAAAGTTATCAGG 1204
Query 1158 ACAAGGTGAAAG-AGAGTTCGCA-AACGAAGTTATTGTTGTGGCAAAGCTTCAACATAGA 1215
|||||||| ||| ||||||| | ||||| ||| || |||| |||||||| || ||||||
Sbjct 1205 ACAAGGTG-AAGCAGAGTTC-AAGAACGAGGTTGTTCTTGTTGCAAAGCTACAGCATAGA 1262
Query 1216 AATTTGGTAAGA-TTGCTAGGGTTTTGTTTGGAAAGAGATGAGAGGATACTT-GTCTATG 1273
||| |||| ||| || || ||||||||| | || |||| || ||| || || ||||| |
Sbjct 1263 AATCTGGTTAGACTT-CTCGGGTTTTGTCTAGACGGAGAAGAAAGGGTA-TTAGTCTACG 1320
Query 1274 AGTTTGTTCCCAACAAAAGTCTCGACTACTTCATTTTTGACTCTACCATGCAAAGCCTGC 1333
||| ||| |||||||||||||| || |||||| | |||||| || | | ||| || | |
Sbjct 1321 AGTATGTACCCAACAAAAGTCTGGATTACTTCCTCTTTGACCCTGCAAAGCAGAGTCAGT 1380
Query 1334 TGGACTGGACTAGACGGTACAAAATCATTGGAGGAATTGCTAGAGGGATTCTT-TATCTT 1392
|||| |||||| | || ||||| || || || ||| ||||| |||||||| || ||||||
Sbjct 1381 TGGATTGGACTCGGCGATACAAGATTATCGGTGGAGTTGCTCGAGGGATT-TTGTATCTT 1439
Query 1393 CATCAAGATTCACGACTCACAATCATACATCGTGATCTCAAAGC-AGGTAATATCCTCCT 1451
||||||||||||||||||||||||||||| ||||| |||||||| || ||| || || |
Sbjct 1440 CATCAAGATTCACGACTCACAATCATACACCGTGACCTCAAAGCCAG-TAACATTCTA-T 1497
Query 1452 TGG-TGATGATATGAATGCAAAAATCGCCGACTTTGGAATGGCGAGAAT-TTTCGGAATG 1509
||| || || |||||| | ||||| || || ||||||||||| || || ||| ||| ||
Sbjct 1498 TGGATGCGGACATGAATCCTAAAATTGCAGATTTTGGAATGGCTAGGATCTTT-GGATTG 1556
Query 1510 GACCAAACGGAAGCCAATACTAGGAGAATAGTTGGAACATATGGCTATATGTCTCCCGAG 1569
|||||||| ||| || || || ||||||||||| || ||||| || ||||||||||||
Sbjct 1557 GACCAAACCCAAGAGAACACAAGCAGAATAGTTGGTACCTATGGTTACATGTCTCCCGAG 1616
Query 1570 TATGCGATGTATGGCCAATTCTCCATGAAATCAGATGTGTATAGCTTCGGGGTCTTGGTT 1629
||||| ||| |||| || | ||| |||||||| ||||| ||||||||||| || || |||
Sbjct 1617 TATGCAATGCATGGTCAGTACTCAATGAAATCTGATGTCTATAGCTTCGGAGTGTTAGTT 1676
Query 1630 CTCGAAATTATAAGTGGGAAAAAGAACAGCAA-TGTCTATCAAATGGATGGTACTAGTGC 1688
|| || |||||||| || || ||||| |||| | |||| |||| || ||| | |
Sbjct 1677 CTTGAGATTATAAGCGGTAAGAAGAATAGCAGCT-TCTACCAAACAGACGGTGC-ACA-- 1732
Query 1689 TGGCAATTTGGT-TACATATACTTGGAGACTATGGAGCAATGGGTCACCGTTAGAGCTAG 1747
|| | || ||| | ||||| ||||| | || ||||| || ||| |||| || || || |
Sbjct 1733 TGAC--TT-GGTCT-CATATGCTTGGGGGCTTTGGAGTAACGGGACACCATTGGAACTCG 1788
Query 1748 TGGATCCATCCT-TT-CGTGATAACTATCGAATAAATGAAGTT-T-CGA-GATGCATCCA 1802
|||||||| | | || | ||||| | | || | ||||||| | ||| | || ||||
Sbjct 1789 TGGATCCAGC-TATTGCA-GATAATTGCCAAAGGAGTGAAGTTGTTCGATG-TG--TCCA 1843
Query 1803 TATCG--CTTTACTATGTGTTCAAGAAGAAGCTGAAGATCGTCCAACCATGTCAGCTATT 1860
||||| |||| |||||||||||||||| ||| || ||||| || ||||| | |||
Sbjct 1844 TATCGGTCTTT--TATGTGTTCAAGAAGATCCTGCTGAGCGTCCGACGTTGTCAACCATT 1901
Query 1861 GTCCAGATGCTCACTA 1876
|| | |||||||||||
Sbjct 1902 GTTCTGATGCTCACTA 1917
> Ahg492547 jgi|Araly1|492547|fgenesh2_kg.7__1980__AT4G23150.1
Length=1656
Score = 390 bits (211), Expect = 2e-107
Identities = 504/643 (78%), Gaps = 30/643 (5%)
Strand=Plus/Plus
Query 1016 TTGATTTTAAAGCAATTGAGGC-AGCAACAAATAAGTTTTGTGAGACTAACAAACTTGGT 1074
|||||| || ||||||| | || | |||||||| | |||| |||| ||| ||| |||||
Sbjct 971 TTGATTATAGAGCAATTCAAGCTA-CAACAAATGATTTTTCAGAGAATAATAAAATTGGT 1029
Query 1075 CAAGGTGG-TTTCGGCGAAGTTTACAAGGGTATATTTCCTAGTGGAGTA-C-AAGTTGCA 1131
| |||||| ||| || || ||||||||||||| |||| | | |||| | | ||||||||
Sbjct 1030 CGAGGTGGATTT-GGTGACGTTTACAAGGGTACATTTTCAAATGGA--ACCGAAGTTGCA 1086
Query 1132 GTGAAGAGGTTATCCAAGACATCAGGACAAGGTGAAAGAGAGTTCGCA-AACGAAGTTAT 1190
|||||||| | || || ||||||| ||||||||| | ||| ||| | ||||| ||| |
Sbjct 1087 GTGAAGAGACTGTCGAAAACATCAGAACAAGGTGACACAGAATTC-AAGAACGAGGTTGT 1145
Query 1191 TGTTGTGGCAAAGCTTCAACATAGAAATTTGG-TAAGATTGCTAGGGTTTTGTTTGGAAA 1249
|||||| ||||| |||| || | |||| ||| || |||| || || |||| | | |||
Sbjct 1146 TGTTGTTGCAAATCTTCGGCACAAAAATCTGGTTAGGATT-CTCGGATTTTCTATAGAAG 1204
Query 1250 GAGATGAGAGGATACTT-GTCTATGAGTTTGTTCCCAACAAAAGTCTCGACT-ACTTCAT 1307
|||| || |||||| || |||||||||| ||| || ||||| || || | ||||| |
Sbjct 1205 GAGAAGAAAGGATA-TTGGTCTATGAGTATGTGGAAAATAAAAGCCTTGA-TAACTTCCT 1262
Query 1308 TTTTGACT-CTACCATGCAAA-GCCTGCTGGACTGGACTAGA-CGGTACAAAATCATTGG 1364
||||| | || | | | ||| | | |||| ||||||| | | || ||| | |||||| |
Sbjct 1263 ATTTGA-TCCTGCAAAG-AAAGGTCAGCTGTACTGGAC-ACAGCGATACTATATCATTAG 1319
Query 1365 AGGAATTGCTAGAGGGATTCTTTATCTTCATCAAGATTCACGACTCACAATCATACATCG 1424
|| |||||||||||||| || ||||||||||||||||||||||||||||||||||| ||
Sbjct 1320 TGGGATTGCTAGAGGGATCCTATATCTTCATCAAGATTCACGACTCACAATCATACACCG 1379
Query 1425 TGATCTCAAAGC-AGGTAATATCCTCCTTGG-TG-ATGATATGAATGCAAAAATCGCCGA 1481
||| |||||||| || ||| || ||||| || || | ||||||||| | ||||| || ||
Sbjct 1380 TGACCTCAAAGCGAG-TAACATTCTCCT-GGATGCA-GATATGAATCCTAAAATTGCTGA 1436
Query 1482 CTTTGGAATGGCGAGAATTTTCGGAATGGACCAAACGGAAGCC-AATACTAGGAGAATAG 1540
||||||||||| || || ||||||||||||||||| | || || || || |||||||
Sbjct 1437 TTTTGGAATGGCAAGGATCTTCGGAATGGACCAAACCCA-GCAGAACACAAGCAGAATAG 1495
Query 1541 TTGGAACATATGGCTATATGTCTCCCGAGTATGCGATGTATGGCCAATTCTCCATGAAAT 1600
|||| || || || || |||||||| || ||||||||| |||||||||||| |||||||
Sbjct 1496 TTGGTACCTACGGTTACATGTCTCCTGAATATGCGATGCGTGGCCAATTCTCAATGAAAT 1555
Query 1601 CAGATGTGTATAGCTTCGGGGTCTTGGTTCTCGAAATTATAAG 1643
| ||||| || || || || || || ||||| || ||||||||
Sbjct 1556 CTGATGTCTACAGTTTTGGAGTATTAGTTCTTGAGATTATAAG 1598
> Ahg889852 jgi|Araly1|889852|Al_scaffold_0007_1838
Length=2088
Score = 368 bits (199), Expect = 8e-101
Identities = 515/665 (77%), Gaps = 32/665 (5%)
Strand=Plus/Plus
Query 123 AACGTATTCAAGAAACAGCACTTACTTCACCAATCTCAAAACACTTTTGTCCTCTCTCTC 182
||| || ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||
Sbjct 111 AACTTACTCAAGGAACAGCACTTACTTCACCAATCTCAAAACCCTTTTATCGTCTCTCTC 170
Query 183 TTCCCGGAACGCTTCATACTCTACCGGATTCCAAA-CTGCCACGGCGGGACAAGCTCCCG 241
|||| || || || ||||| ||||||||||||| | |||| || ||||||||| ||||
Sbjct 171 CTCCCCCAATGCCTCTTACTCCACCGGATTCCAAAAC-GCCAAGGTGGGACAAGCCCCCG 229
Query 242 ACCGTGTCACCGGACTTTTCCTTTGTCGCGGAGACGTCTCACAAGAAGTTTGCCGTAACT 301
|| | ||||| |||||||||||||| ||||||||| |||| | ||||||| ||||||||
Sbjct 230 ACAGGGTCACTGGACTTTTCCTTTGCCGCGGAGACCTCTCGCCCGAAGTTTTCCGTAACT 289
Query 302 GCGTCGCCTTTTCCGTCAAGGAGACTTTATATT-GGTGTCCGTATAACAAAGAAGTCGTG 360
|| ||||||| ||||| || || || ||| | | |||||||| || | | ||||| ||||
Sbjct 290 GCATCGCCTTCTCCGTTAACGAAACGTTA-ACTCGGTGTCCGAATCAGAGAGAAGCCGTG 348
Query 361 CTTTATTACGATGAGTGTATGCTTAGATACTCTCACC-GAAATATTCTCTCGACCGTTAC 419
|| |||||||| ||||| ||||| |||||||||||| ||| |||||| |||||| |||
Sbjct 349 CTCTATTACGAGGAGTGCATGCTCAGATACTCTCACAAGAA-TATTCTATCGACCCTTAT 407
Query 420 ATACGATGGAAG-TGCTATCTTGTTGAACGGCGCTAATATTTCATCAAGTAATCAAAATC 478
||| ||||| | | | ||| || |||| | |||||||||||| | ||| |
Sbjct 408 TTACCATGGAGGATTC-ATCATGACGAACCCCAATAATATTTCATC---T---CAAC-T- 458
Query 479 AAGTAGAT-GAGTTT-AGGGATTTGGTGTCGTCCACGTTGAACCTAGCTGCCGTTGAAGC 536
| | ||| || || | | |||| || ||||||||| |||||| |||||||| || ||
Sbjct 459 A-GAAGACCGA-TTCGAAG-ATTTTGTATCGTCCACGATGAACCAAGCTGCCGAGGAGGC 515
Query 537 AGCGAATAGTTCTAAAAAATTTTATACGAGAAAGGTCATCAC-ACCCCAG-CC----TTT 590
|| ||||| ||||| || || ||||| | || || || | ||| || || |||
Sbjct 516 AGTGAATAATTCTAGGAAGTTCTATACAATAAGGGCCAACTGGACCGCACTCCGGAGTTT 575
Query 591 GTACTTGTTAGTTCAGTGCACACCTGATCTTACAAGACAAGACTGTTTA-CGTTGCCTAC 649
| || | | ||||| ||||| |||||||||| |||||||||||| || | | | || |
Sbjct 576 GCACGTACTGGTTCAATGCACTCCTGATCTTAGAAGACAAGACTGCTTGGCCT-GTCTGC 634
Query 650 AAAAATCCATCAAGGGAATGTCTCTTTACAGAATTGGAGGAAGAtttttttACCCTAGTT 709
|| | |||||||| |||||| ||||||||||||| ||||||||| || | | || || |
Sbjct 635 AATACTCCATCAATGGAATGCCTCTTTACAGAATCGGAGGAAGACTTCTCTGGCCAAGCT 694
Query 710 GTAATTCAAGGTACGAGAATTACTCGTTCTACAATGAAACCGCCACTAGATCATCATCAC 769
|||| |||||||||||| |||| |||||||||| |||| || || | || | || |||
Sbjct 695 GTAACTCAAGGTACGAGCTTTACCCGTTCTACAACGAAAGCGTCATT-GA--AGCACCAC 751
Query 770 CACCG 774
|||||
Sbjct 752 CACCG 756
> Ahg889838 jgi|Araly1|889838|Al_scaffold_0007_1824
Length=2115
Score = 326 bits (176), Expect = 5e-88
Identities = 463/595 (78%), Gaps = 45/595 (8%)
Strand=Plus/Plus
Query 181 TCTTCCCGGAACGCTTCATACTCTACCGGATTCC-AAACTGCCACGGCGGGACAAGCTCC 239
|||||||| ||||| || ||||| |||||||||| |||| |||||||| ||| |||| ||
Sbjct 274 TCTTCCCGTAACGCCTCTTACTCCACCGGATTCCAAAAC-GCCACGGCAGGAAAAGCCCC 332
Query 240 CGACCGTGTCACCGGACTTTTCCTTTGTCGCGGAGACGTCTC-ACAAGAAGTTTGCCGTA 298
|||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 333 CGACAGGGTCACCGGACTTTTCCTTTGTCGCGGAGACGTCTCGACG-GAAGTTTGCCGTA 391
Query 299 ACTGCGTCGCCTTTTCCGTCAAGGAGAC-TTTATATTGGTGTCCGTATAACAA-AGAAGT 356
|||||||| |||| ||||||| || || |||| || |||||||| |||| || |||||
Sbjct 392 GCTGCGTCGTCTTTGCCGTCAACGACACCTTTA-ATCGGTGTCCGGATAA-AAGAGAAGC 449
Query 357 CGTGCTT-TATTACGATGAGTGTATGCTTAGATACTCTCACC-GAAATATTCTCTCGACC 414
|||| || |||||||| ||||| ||||| ||||||||| || ||| ||| || |||||
Sbjct 450 CGTG-TTCTATTACGAGGAGTGCATGCTCAGATACTCTGACAAGAA-TATACTATCGACG 507
Query 415 GTTACATACGATGGAAGTGCT-A-TCTTGTTGAACGGCG-CTAATATTTCATCAAGTAAT 471
||||||||||| ||| | | | | || || |||| | | |||||||| || ||||
Sbjct 508 GTTACATACGACGGA-G-GATTAATCATGACGAACCCCAAC-AATATTTCTTC---TAAT 561
Query 472 CAAA-ATCAAGTAGATGAGTTTAGGGATTTGGTGTCGTCCACGTTGAACCTAGCTGCCGT 530
|||| | | | | | || || || |||||||||||| |||||| |||||||||
Sbjct 562 CAAAGAG-AC-TCGTTC-GT--AGC--TTCGGTGTCGTCCACAATGAACCAAGCTGCCGT 614
Query 531 TG-AAGCAGCGAATAGTTCTAAAAAATTTTATACG--AGAAAG-GTCATCACACC---CC 583
| || |||| || ||||||| |||||| |||||| ||| | || | || || ||
Sbjct 615 CGTAA-CAGCCAACAGTTCTAGAAAATTCTATACGTTAGAGACCGTGTTAACCCCAGTCC 673
Query 584 AGCCTTTGTACTTGT-TAGTTCAGTGCACACCTGATCTTACAAGACAAGACTGTTT-ACG 641
|| ||||||| | | | ||||||||||| | ||||||||||||||||||||| || | |
Sbjct 674 AGACTTTGTA-TGGGCTGGTTCAGTGCACTCGTGATCTTACAAGACAAGACTGCTTGA-G 731
Query 642 TTGCCTACAAAAATCCATCAAGGGAATGTC-TCTTTACAGAA-TTGGAGGAAGAtttttt 699
|| | |||| || ||||| | || | ||||||| | | |||| ||||||||| ||
Sbjct 732 CTGTTTGCAAAGTTCTATCAATAGTATC-CATCTTTAC-GCAGTTGGTGGAAGATTTGTT 789
Query 700 tACCCTAGTTGTAATTCAAGGTACGAGAATTACTCGTTCTACAATGAAACCGCCA 754
|| ||||| |||||| | ||||||||| |||||| |||||||| | ||| ||||
Sbjct 790 TATCCTAGCTGTAATGCTAGGTACGAGCTTTACTCATTCTACAACGGAACGGCCA 844
> Ahg492544 jgi|Araly1|492544|fgenesh2_kg.7__1977__AT4G23210.2
Length=2189
Score = 302 bits (163), Expect = 9e-81
Identities = 611/816 (75%), Gaps = 76/816 (9%)
Strand=Plus/Plus
Query 1064 ACAAACTTGGTCAAGGTGG-TTTCGGCGAA--GTTTACAAGGGTATATTTCCTAG-TGGA 1119
||||| | || |||||||| ||| | ||| |||| ||||||||| || ||| | ||||
Sbjct 1130 ACAAAATCGGCCAAGGTGGATTT--G-GAAGTGTTTTCAAGGGTATGTTGCCT-GATGGA 1185
Query 1120 GTACAAGTTGCAGTGAAGAGGTTATCCAAGA-CATCAGGACAAGGTGA-AAGAGAGTTCG 1177
| || |||||||||||||||| | ||| | |||| | ||||||||| || |||||||
Sbjct 1186 AAAGAAATTGCAGTGAAGAGGTTGT-CAAAATCATCCGAACAAGGTGAGAA-AGAGTTC- 1242
Query 1178 CA-AACGAAGTTATTGTTGTGGCAAAGCTTCAACATAGAAAT-TTGGTAAGA-TTGCTAG 1234
| ||||| ||| ||||||| ||||| ||||| ||||||||| || || ||| || ||
Sbjct 1243 AAGAACGAGGTTGTTGTTGTCGCAAAACTTCAGCATAGAAATCTT-GTTAGACTT-CT-C 1299
Query 1235 GGTTTTGTTTG-GAAA-GAGATGAGAGGATACTTGTCTATGAGTTTGTTCCCAACAAAAG 1292
|||||| | || ||| |||| || | |||||| || || |||||||| |||||||||||
Sbjct 1300 GGTTTT-TCTGTCAAAGGAGAAGAAAAGATACTCGTGTACGAGTTTGTGCCCAACAAAAG 1358
Query 1293 TCTCGACTACTTCATTTTTGACTCTACCATGCAAAGCCTGCTGGACTGGACTAGACGGTA 1352
||| || | ||| ||| |||| ||| | |||||| | | |||||||| || ||| |
Sbjct 1359 TCTTGATTGTTTCCTTTCTGACCCTATAAAGCAAAGAGAGTTAGACTGGACAAGGCGGCA 1418
Query 1353 CAAAATCATTGGAGGAATTGCTAGAGGGATTCTTTATCTTCATCAAGATTCACG-ACTCA 1411
||| |||||||||||||||||||||||||||| ||||||||||| | |||||| | |||
Sbjct 1419 CAAGATCATTGGAGGAATTGCTAGAGGGATTCAATATCTTCATCATGGTTCACGGA-TCA 1477
Query 1412 CAATCATACATCGTGATCTCAAAGCAGGTAAT-ATCCTCCTTGG-TGATGATATGAATGC 1469
||||||||||||||| |||||||| || || || ||| |||| || ||||||||| |
Sbjct 1478 AAATCATACATCGTGACCTCAAAGC-GGAAAACATACTC-TTGGATGGTGATATGAACCC 1535
Query 1470 AAAAATCGCCGACTTTGGAATGGCGAGAAT-TTTCGGAATGGACCAAACG-GAAGCCAAT 1527
|| || | || ||||||||||| || || ||| |||||||||||||| || || ||
Sbjct 1536 CAAGATTTCTGATTTTGGAATGGCAAGGATCTTT-GGAATGGACCAAACTAGA-GCTAAC 1593
Query 1528 ACTAGGAGAATAGTTGGAAC--A-TATGGCTATATGTCTCCCGAG-T-AT--GC-----G 1575
|| || || || |||||||| | || || || | | | ||| | || || |
Sbjct 1594 ACAAGAAGGATTGTTGGAACTGAGTAAAATTA-ATCT-TGCAGAGGTTATATGCCCCCAG 1651
Query 1576 ATGTATGGCCAATTCTCCATGAAATCAGATGTGTATAGCT-TCGGGGTCTTGGTTCTCGA 1634
| |||| ||||||| |||||||| ||||||||||||| | || ||||| ||||| ||
Sbjct 1652 A-GTATA---AATTCTCAATGAAATCTGATGTGTATAGCTAT-GGAGTCTTAGTTCTTGA 1706
Query 1635 AATTATAAGTGGGAAAAAGAACAGCAATGTCTATCAAATGGATGGTACTAGTGCTGGCAA 1694
|||||| | || || |||||||| || || || || | | || || |||
Sbjct 1707 GATTATATGCGGCAAGAAGAACAGGAA---CT-TC---TGCCC--TCC-AG--CTC-CAA 1753
Query 1695 -TTTGGTTACATATACTTGGAGACTATGGAGCA-ATGGGTCACCGTTAGAGCTAGTGGAT 1752
|||||| |||| | ||||||| ||||||| | | ||| |||| ||||| || ||||||
Sbjct 1754 ATTTGGTCACATTTGCTTGGAGGTTATGGAG-AGACGGGGCACCATTAGAACTCGTGGAT 1812
Query 1753 CCA-TCCTTTCGTGATAACTATCGAATAAATGAAGTT-TCGAGATGCATCCATATCGCTT 1810
||| | |||| || || | || || ||||||| | ||||||||||| || ||
Sbjct 1813 CCAATAATTTCA-GAGAATTGTCCAACCGATGAAGTGATA-AGATGCATCCACATTGCGC 1870
Query 1811 TACT-ATGTGTTCAAGAAGAAGCTGA-AGATCGTCC 1844
| || ||||||||||||||| || | |||||||||
Sbjct 1871 T-CTTATGTGTTCAAGAAGATCCT-ACAGATCGTCC 1904
> Ahg329316 jgi|Araly1|329316|fgenesh1_pm.C_scaffold_7001543
Length=666
Score = 206 bits (111), Expect = 7e-52
Identities = 171/198 (86%), Gaps = 11/198 (6%)
Strand=Plus/Plus
Query 123 AACGTATTCAAGAAACAGCACTTACTTCACCAATCTCAAAACACTTTTGTCCTCTCTCTC 182
||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 111 AACTTACTCAAGTAACAGCACTTACTTCACCAATCTCAAAACTCTTTTGTCCTCTCTCTC 170
Query 183 TT-CCCGGAACGCTTCATA-CTCTACCGGATTCCAAA-CTGCCACGGCGGGACAAGCTCC 239
|| ||| ||||| || || | | ||||||||||||| | ||||||| ||||||| | ||
Sbjct 171 TTTCCCC-AACGCCTCTTATCCC-ACCGGATTCCAAAAC-GCCACGGTGGGACAAAC-CC 226
Query 240 C-GACCGTGTCACCGGACTTTTCCTTTGTCGCGGAGACGTCT-CACAAGAAGTTTGCCGT 297
| ||| | |||||||||||||||||||| ||||||||| ||| | | ||||||||||||
Sbjct 227 CTGACAGGGTCACCGGACTTTTCCTTTGCCGCGGAGACCTCTGCCC--GAAGTTTGCCGT 284
Query 298 AACTGCGTCGCCTTTTCC 315
|||||||||||||| |||
Sbjct 285 AACTGCGTCGCCTTCTCC 302
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76370941225
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5