BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G46530.1
Length=2972
Score E
Sequences producing significant alignments: (Bits) Value
Ahg323301 jgi|Araly1|323301|fgenesh1_pm.C_scaffold_5000845 1738 0.0
Ahg937390 jgi|Araly1|937390|scaffold_501581.1 1519 0.0
> Ahg323301 jgi|Araly1|323301|fgenesh1_pm.C_scaffold_5000845
Length=2490
Score = 1738 bits (941), Expect = 0.0
Identities = 1387/1599 (87%), Gaps = 44/1599 (3%)
Strand=Plus/Plus
Query 93 ATGGTAGATGCGATCAC-GGAGTTCGTTGTGGGAAAGATCGGCAACTATCTCATTGAA-G 150
||||||||||| ||||| || ||| ||| || ||||||||| |||||| | | || |
Sbjct 1 ATGGTAGATGCTATCACTGG-GTTTGTTTTGAAAAAGATCGGTGGCTATCTTA-TCAATG 58
Query 151 AAGCATCAATGTTTA-TGGCAGTCAAAGAGGATCTAGAAGAGCTGAAGACGGAGTTGACG 209
||| || ||||| | ||| ||||||||| |||||||| |||||||||||||||||||||
Sbjct 59 AAGTGTCGATGTTGATTGG-AGTCAAAGACGATCTAGAGGAGCTGAAGACGGAGTTGACG 117
Query 210 TGCATCCATGGTTATCTCAAGGACGTTGAAGCGCGAGAAAGAGAAGATGAGGTCTCAAAA 269
||||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct 118 TGCATCCATGGTTATCTTAAGGATGTTGAAGCTCGAGAAAGAGAAGAGGAGGTCTCAAAA 177
Query 270 GAGTGGTCAAAACTGGTTTTAGATTTCGCTTATGACGTCGAAGATGTTTTGGACACTTAT 329
|||||| ||||||| ||||||||| |||| |||||| |||| |||||||||||||| |||
Sbjct 178 GAGTGGACAAAACTTGTTTTAGATATCGCCTATGACATCGAGGATGTTTTGGACACCTAT 237
Query 330 CACTTGAAACTCGAAGAAAGGTCACAAAGGCGAGGCTTGAGGAGATTGACCAACAAAATA 389
||||||| | |||||||| ||||| || ||||||||| |||| ||||||||||||||
Sbjct 238 TTCTTGAAAGTTGAAGAAAGATCACAGAGACGAGGCTTGTCGAGAATGACCAACAAAATA 297
Query 390 GGCAGGAAGATGGATGCGTACAGCATA-GTTGATGATATCAGAATTCTCAAGAGAAGAAT 448
|||| || || ||||||||||||||| |||| ||||||||||| ||||||||||||||
Sbjct 298 GGCAAGACGAAAGATGCGTACAGCATAGGTTG-TGATATCAGAACCCTCAAGAGAAGAAT 356
Query 449 TTTGGATATCACTCGCAAGAGGGAGACTTATGGTATAGGAGGCTTGAAAGAGCCTCAAGG 508
|||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 357 CTTGGATGTTACTCGCAAGAGGGAGACTTATGGTATAGGAGGCTTCAAAGAGCCTCAAGG 416
Query 509 AGGAGGGAATACTTCAAGTTTGAGAGTGAGACAACTTCGGCGTGCTCGATCTGTTGATCA 568
||||||||||| ||||||||||||||| || || ||| ||||||||||||||||||||||
Sbjct 417 AGGAGGGAATATTTCAAGTTTGAGAGTTAGGCAGCTTGGGCGTGCTCGATCTGTTGATCA 476
Query 569 AGAAGAGGTT-GTAGTTGGTTTGGAAGATGATGCTAAGATTCTTTTGG-AAAAGCTTC-T 625
||||| ||| ||| ||||||||||||||||||||||||||||||||| |||| |||| |
Sbjct 477 CGAAGA-GTTAGTAATTGGTTTGGAAGATGATGCTAAGATTCTTTTGGTAAAA-CTTCTT 534
Query 626 --TGATTATGAA-GAGAAAAATAGATTTATTATCTCGATCTTCGGTATGGGAGGCCTTGG 682
|||| || || ||| | || || ||||||||| ||||||||||||||||| || ||
Sbjct 535 GGTGATAAT-AAGGAGGACAAGAGGCATATTATCTCCATCTTCGGTATGGGAGGTCTCGG 593
Query 683 AAAGACTGCACTTGCTAGGAAGCTCTACAACTCAAGGGATGTGAAGGA-AAGATTCGAAT 741
||| ||||||||||| |||||||| ||||||||| |||||||||| || |||||| || |
Sbjct 594 AAAAACTGCACTTGCCAGGAAGCTTTACAACTCAGGGGATGTGAA-GAGAAGATTTGATT 652
Query 742 ACCGCGCATGGACTTATGTTTCTCAAGAGTATAAAACTGGAGATATACTAATGAGAATCA 801
||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 653 GCCGTGCGTGGACTTATGTTTCTCAAGAGTATAAAACTGGAGATATACTTATGAGAATCA 712
Query 802 TTAGATCTTTGGGAATGACTTCTGGGGAAGAGTTGGAAAAGATCAGAAAGTTTGCAGAGG 861
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 713 TTAGATCTTTGGGAATGACTTCAGGGGAAGAGTTGGAGAAGATCAGAAAGTTTGCAGAGG 772
Query 862 AAGAGTTAGAAGTTTACCTTTACGGTCTTCTAGAAGGGAAAAAATATTTGGTGGTGGTGG 921
| || |||||||||||||| |||||||||||||||||||||| ||||||||||| ||||
Sbjct 773 AGGAACTAGAAGTTTACCTTCACGGTCTTCTAGAAGGGAAAAAGTATTTGGTGGTCGTGG 832
Query 922 ATGATATATGGGAGCGAGAAGCGTGGGACAGCTTAAAGAGAGCGTTACCTTGCAACCATG 981
||||||||||||||| |||||||||||| ||||| |||||||||||||| | ||| || |
Sbjct 833 ATGATATATGGGAGCAAGAAGCGTGGGAGAGCTTGAAGAGAGCGTTACCGTACAATCACG 892
Query 982 AAGGAAGTAGAGTCATCATCACTACGCGTATTAAAGC-CGTGGCTGAAGGCGTAGATGGG 1040
|||||||||||||||||||||||||||||| | ||| | | || |||||||| ||||||
Sbjct 893 GAGGAAGTAGAGTCATCATCACTACGCGTATCAGAGCAC-TAGCCGAAGGCGTGGATGGG 951
Query 1041 AGATTCTATGCTCATAAGTTAAGGTTCTTGACGTTTGAAGAAAGCTGGGA-GTTGTTTGA 1099
| | |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||
Sbjct 952 ACAGTCTATGCTCATAAGTTAAGGTTCTTGACGTTTGAGGAAAGCT-GGACATTGTTTGA 1010
Query 1100 ACA-AAGAGCATTCAGGAATATACAAAGGAAGGATGAAGATTTGCTGAAAACCGGAAAAG 1158
||| || ||||||||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct 1011 ACAGAA-AGCATTCAGGAATATGGAAAAGATCGATGAAGATTTGCTGAAAACCGGAAAAG 1069
Query 1159 AAATGGTTCAAAAATGCAGAGGGTTACCACTTTG-TATAGTTGTTCTTGCGGGGCTTTTG 1217
|||||||||||||||| | || ||||| | ||| |||||| |||||| | ||| |||||
Sbjct 1070 AAATGGTTCAAAAATGTGGTGGCTTACCGC-TTGCTATAGTCGTTCTTTCCGGGATTTTG 1128
Query 1218 TCGAGGAAGA-CACCAAGCGAGTGGAATGATGTTTGTAAC-AGTTTATGGAGACGCCTAA 1275
|| ||||| | | ||| ||||||| |||| || ||| | |||||||||||||| ||||
Sbjct 1129 TCTAGGAAAAGGA-CAAACGAGTGGCATGAGGTGTGT-GCTAGTTTATGGAGACGTCTAA 1186
Query 1276 AGGATGACTCCATTCATGTTGCCCCTATTGTGTTTGATCTAAGTTTCAAGGAGCTGCGGC 1335
|||||||||||||||||||| || | ||||||||||||||| |||||||| ||||||
Sbjct 1187 AGGATGACTCCATTCATGTT--TCC-ACTGTGTTTGATCTAAGCTTCAAGGATTTGCGGC 1243
Query 1336 ATGAGTCCAAACTCTGTTTTCTGTACCTTAGTATCTTCCCAGAGGACTATGAGATTGACC 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1244 ATGAGTCCAAACTCTGTTTTCTGTACCTTAGTATCTTCCCAGAGGACTATGAGATAGATA 1303
Query 1396 TAGAGAAGTTGATACACTTACTTGTAGCAGAAGGTTTTATACAAGGGGATGAAGAGATGA 1455
||||||| ||||| |||||||||||||||||||| |||||||||| |||||||||||| |
Sbjct 1304 TAGAGAAATTGATCCACTTACTTGTAGCAGAAGGGTTTATACAAGAGGATGAAGAGAT-A 1362
Query 1456 T-GATGGAAGATGTGGCTCG-GTACTACATCGAAGAGCTGATAGATAGAAGCTTACTTGA 1513
| ||||||||| ||||||| | | || ||||| |||||||||||||||||| || | |
Sbjct 1363 TTGATGGAAGACATGGCTCGAG-ATTATATCGACGAGCTGATAGATAGAAGCCTAGTCAA 1421
Query 1514 AGCAGTGAGAAGAGAAAGAGGAAAAGTGATGTCTTGTAGAATCCATGATCTTCTGAGAGA 1573
||| | |||| |||| |||| ||||| ||||| || | |||||||||||||||||||||
Sbjct 1422 AGCTGAAAGAATAGAACGAGGCAAAGTCATGTCCTGCAAAATCCATGATCTTCTGAGAGA 1481
Query 1574 CGTGGCTATCAAGAAATCTAAAGAGCTCAACTTTGTAAACGTGTATAACGATCATGTGGC 1633
|||| |||||||||| | |||||||| ||||||||||| | || ||||| | | |
Sbjct 1482 CGTGATTATCAAGAAAGCCAAAGAGCTTAACTTTGTAAATATATACAACGAGAA-G---C 1537
Query 1634 CCAACATTCTTCTACTACTTGCAGAAGGGAAGTGGTTCA 1672
| ||||||||| ||| |||||||||||||||| ||||
Sbjct 1538 --ATCATTCTTCTGCTATTTGCAGAAGGGAAGTGTTTCA 1574
> Ahg937390 jgi|Araly1|937390|scaffold_501581.1
Length=2290
Score = 1519 bits (822), Expect = 0.0
Identities = 1303/1534 (85%), Gaps = 38/1534 (2%)
Strand=Plus/Plus
Query 80 CGATATTGAGAAGATGGTAGATGCGATCACGGAGTTCGTTGTGGGAAAGATCGGCAACTA 139
||||| |||||| |||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct 8 CGATACTGAGAATATGGTAGATGCGATTGCGGGGTTTGTTGTGGGAAAGATCGGCAACTA 67
Query 140 TCTCATTGAAGAAGCATCAATGTTTATGGCAGTCAAAGAGGATCTAGAAGAGCTGAAGAC 199
|||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||
Sbjct 68 TCTCATTGAAGAAGCATCAATGTTGATGGCAGTCAAAGACGATCTAGAGGAGCTGAAGAC 127
Query 200 GGAGTTGACGTGCATCCATGGTTATCTCAAGGACGTTGAAGCGCGAGAAAGAGAAGATGA 259
||||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||
Sbjct 128 AGAGTTGACGTGCATCCAAGGTTATCTCAAGGATGTTGAAGCACGAGAAAGAGAAGACGA 187
Query 260 GGTCTCAAAAGAGTGGTCAAAACTGGTTTTAGATTTCGCTTATGACGTCGAAGATGTTTT 319
|||||||||||||||| |||||||| |||||||| ||||||||||| | || ||||||||
Sbjct 188 GGTCTCAAAAGAGTGGACAAAACTGATTTTAGATATCGCTTATGACATTGAGGATGTTTT 247
Query 320 GGACA-CTTATCACTTGAAACTCGAAGAAAGGTCACAAAGGCGAGGCTTGAGGAGATTGA 378
||||| | |||||| |||||||||||||||| ||||||||||||||||| | ||||| ||
Sbjct 248 GGACAGC-TATCACATGAAACTCGAAGAAAGATCACAAAGGCGAGGCTTCAAGAGATGGA 306
Query 379 CCAACAAAATAGGCAGGAAGATGGATGCGTAC-AGCATAGTTGATGATATCAGAATTCTC 437
|||||||| |||||||||| |||||| ||| | |||||||||||||||||||||| |||
Sbjct 307 CCAACAAATTAGGCAGGAAAATGGATTCGT-CTAGCATAGTTGATGATATCAGAACCCTC 365
Query 438 AAGAGAAGAATTTTGGATATCACTCGCAAGAGGGAGACTTATGGTATAGGAGGCTTGAAA 497
||| ||||||| | ||| | ||||||||| || |||| ||||| |||||| ||| ||
Sbjct 366 AAGGGAAGAATCCTAGATGTTACTCGCAAGCGGAAGACGTATGGCATAGGAAACTTCAAT 425
Query 498 GAGCCTCAAGGAGGAGGGAATACTTCAAGTTTGAGAGTGAGACAACTTCGGCGTGCTCGA 557
||||||| |||||||| ||||| || ||||| || || || | |||| || |||||||
Sbjct 426 GAGCCTCGAGGAGGAGAGAATAATTTAAGTTCAAGGGTAAGGGAGCTTCCGCATGCTCGA 485
Query 558 TCTGTTGATCAAGAAGAGGTTGTAGTTGGTTTGGAAGATGATGCTAAGATTCTTTTGGAA 617
| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 486 TTTGTTGATCAAGAAGAGCTTGTAGTTGGTGTGGAAGATGATGCTAAGATTCTTTTGGAA 545
Query 618 AAGCTTCTTGATTATGA-AGAGAAAAATAGATTTATTATCTCGATCTTCGGTATGGGAGG 676
|||||||||||| || | |||||| || |||| ||| ||||| || ||||| ||||||||
Sbjct 546 AAGCTTCTTGATGAT-AGAGAGAACAAGAGATATATCATCTCCATATTCGGCATGGGAGG 604
Query 677 CCTTGGAAAGACTGCACTTGCTAGGAAGCTCTACAACTCAAGGGATGTGAAGGAA-AGA- 734
||||||||||| || |||||||| ||||| || ||||| | |||||||| ||| | |
Sbjct 605 TCTTGGAAAGACGGCTCTTGCTAGAAAGCTTTATAACTCTTGTGATGTGAA-GAATA-AT 662
Query 735 TTCGAATACCGCGCATGGACTTATGTTTCTCAAGAGTATAAAACTGGAGATATACTAATG 794
|| ||||||||| ||||||||||||||||||||||||||||||| |||||| || |||
Sbjct 663 TTTGAATACCGCACATGGACTTATGTTTCTCAAGAGTATAAAACCAAAGATATGCTTATG 722
Query 795 AGAATCATTAGATCTTTGGGAATGACTTCTGGGGAAGAGTTGGAAAAGATCAGAAAGTTT 854
||||||| || ||||||||| | | |||||||||||| |||||||||||||| | ||||
Sbjct 723 GGAATCATAAGTTCTTTGGGAGTAATTTCTGGGGAAGATTTGGAAAAGATCAGGATGTTT 782
Query 855 GCAGAGGAAGAGTTAGAAGTTTACCTTTACGGTCTTCTAGAAGGGAAAAAATATTTGGTG 914
| || || || ||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 783 TCGGAAGAGGACTTAGAAGTTTACCTTCACAGTCTTCTAGAAGGGAAAAAATATTTGGTG 842
Query 915 GTGGTGGATGATATATGGGAGCGAGAAGCGTGGGACAGCTTAAAGAGAGCGTTACCTT-G 973
||||||||||||||||||||| |||||||||||| ||| | |||||||| ||||| |
Sbjct 843 GTGGTGGATGATATATGGGAGATAGAAGCGTGGGAGAGCCTGAAGAGAGCTTTACCAGAG 902
Query 974 CAACCAT-GAAGGAAGTAGAGTCATCATCACTACGCGTATTAAAGCCGTGGCTGAAGGCG 1032
|| ||| || |||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 903 -AATCATAGA-GGAAGTAGAGTCATCATCACAACGCGTATTAGAGCCGTGGCTGAAGGCA 960
Query 1033 TAGATGGGAGATTCTATGCTCATAAGTTAAGGTT-CTTGACGTTTGAAGAAAGCTGGGAG 1091
| || | |||| |||||||||| || |||||||| || ||| ||||||||||||||| |
Sbjct 961 TGGACGAGAGAGTCTATGCTCACAACTTAAGGTTTCT-GACATTTGAAGAAAGCTGGAAA 1019
Query 1092 TTGTTTGAACA-AAGAGCATTCAGGAATATACAAAGGAAGGATGAAGAT-TTGCTGAAAA 1149
|||||||||| || ||||||| ||||||| ||| || ||||||||| || | || |
Sbjct 1020 CTGTTTGAACAGAA-AGCATTCGGGAATATGCAATGGGTCGATGAAGATCTT-CAGATGA 1077
Query 1150 CCGGAAAAGAAATGGTTCAAAAATGCAGAGGGTTACCACTTTG-TATAGTTGTTCTTGCG 1208
|| ||||||||| || ||||||| | || ||||| ||| | |||||| ||||||| |
Sbjct 1078 TTGGGAAAGAAATGATTAAAAAATGTGGTGGCTTACCGCTT-GCTATAGTCGTTCTTG-G 1135
Query 1209 -GGGCTTT-TGTCGAGGAAGACACCAAGCGAGTGGAATGATGTTTGTAACAGTTTATGGA 1266
||| ||| |||||||||| | |||||| || |||||||| | ||| |||| | |||
Sbjct 1136 TGGG-TTTCTGTCGAGGAAAAGACCAAGAGACTGGAATGAGGCGTGTGGCAGTCTCTGGC 1194
Query 1267 GACGCCTAAAGGATGACTCCATTCATGTTGCCCCTATTGTGTTTGATCTAAGTTTCAAGG 1326
|||||||||||||| | || |||||||| | | | ||||||||||||||| |||||||
Sbjct 1195 GACGCCTAAAGGATAAATCTATTCATGT--CTTC-ACTGTGTTTGATCTAAGCTTCAAGG 1251
Query 1327 AGCTGCGGCATGAGTCCAAACTCTGTTTTCTGTACCTTAGTATCTTCCCAGAGGACTATG 1386
|||| || ||||||| ||||| || ||||| |||||||||||||||||||| |||||||
Sbjct 1252 AGCTACGACATGAGTTGAAACTGTGCTTTCTTTACCTTAGTATCTTCCCAGAAGACTATG 1311
Query 1387 AGATTGACCTAGAGAAGTTGATACACTTACTTGTAGCAGAAGGTTTTATACAAGGGGATG 1446
||||| || ||||||||||||||| |||||||| |||||||| |||||| ||| ||||
Sbjct 1312 AGATTAACGTAGAGAAGTTGATACGGTTACTTGTGGCAGAAGGGTTTATAGAAGAGGAT- 1370
Query 1447 AAGAGATGATGATGGAAGATGTGGCTCGGTACTACATCGAAGAGCTGATAGATAGAAGCT 1506
|| ||| |||||||||||||||||||||||| || || |||||||||||||| ||||| |
Sbjct 1371 AA-AGA-GATGATGGAAGATGTGGCTCGGTATTATATTGAAGAGCTGATAGACAGAAGTT 1428
Query 1507 TACTTGAA-GCAGTGAGAAGAGAAAGAGGAAAAGTGATGT-CTTGTAGAA-TCCATGATC 1563
| | ||| || | |||| ||| |||||||| || || | |||||| || |||||||||
Sbjct 1429 TGGT-GAAAGCTGAAAGAATAGAGAGAGGAAAGGTAAT-TACTTGTA-AAGTCCATGATC 1485
Query 1564 TTCTGAGAGACGTGGCTATCAAGAAATCTAAAGA 1597
|||||||||||||||||||||||||| | |||||
Sbjct 1486 TTCTGAGAGACGTGGCTATCAAGAAAGCCAAAGA 1519
Score = 298 bits (161), Expect = 2e-79
Identities = 407/516 (79%), Gaps = 56/516 (11%)
Strand=Plus/Plus
Query 1658 AAGGGAAGTGGTTCACCATCAGTTCAAGAGATACTCATCTGAGAAACGCAAGAACAAACG 1717
||| |||||||||||||||||| |||| ||||||| ||||||||||| | |||||||||
Sbjct 1520 AAGAGAAGTGGTTCACCATCAGATCAATAGATACTTATCTGAGAAACACCGGAACAAACG 1579
Query 1718 GATGCGATCCTTCTTATACTTTGGAGAATTC-GACCATTTGGTAGGGCTTGATTTTGAAA 1776
||||||||||||||||| |||||||||| || || |||||||||||| |||||||||||
Sbjct 1580 GATGCGATCCTTCTTATTCTTTGGAGAA-TCAGAGGATTTGGTAGGGCGTGATTTTGAAA 1638
Query 1777 -C----A--T-----TGAAGCTACTTCGAGTGCTTGATTTCGGAAGTCTTTGGCTTCCTT 1824
| | | ||||||||||||||||||||||| ||||| | || || ||||||
Sbjct 1639 CCATTTACTTAAAACTGAAGCTACTTCGAGTGCTTGATCTCGGAGGGGTTCGGTTTCCTT 1698
Query 1825 -T--------TAA-A--A--TT------A---A-TGGGGATCTGATCCACTTGAGGTACC 1860
| || | | || | | ||||||||||||||||||||||||||
Sbjct 1699 GTGAAGAAGGGAAGAGGAGTTTACCAGAAGTGATTGGGGATCTGATCCACTTGAGGTACC 1758
Query 1861 TTGGAATTGATGGTAATTCTATCAACGATTTTGATATAGCAGCTATTATATCCAAGTTAC 1920
||||||||| || || || | ||| | |||| | ||||| |||| ||||| ||||
Sbjct 1759 TTGGAATTGCTGATACTTTTCTCAGCAATTT--AC----CAGCTTTTATCTCCAACTTAC 1812
Query 1921 GGTTTCTACAAACACTATTTGTATCTGACAATTATTTCATCGAGG-AAACAATCGATCTC 1979
||||||||||||||||| || ||||| |||| | | |||| ||| ||||||| ||||||
Sbjct 1813 GGTTTCTACAAACACTAGATGCATCTGGCAATGAATCCATC-AGGCAAACAATTGATCTC 1871
Query 1980 CGTAAGCTCACATCATTAAGACATGTCATAGGAAAtttttttGGAGGATTGCTTATAGGC 2039
||||| ||||||||| | ||||||||||||||||| || |||||| ||| || ||||||
Sbjct 1872 CGTAACCTCACATCACTGAGACATGTCATAGGAAAATTCGTTGGAGAATTACTAATAGGC 1931
Query 2040 GACGTAGCG--AACCTTCAGACCTTGACGTCTATCTCCTT-TGACAGCTGGAACAAACTA 2096
||| | || |||||||||||||||| ||||||||||| | ||||||||| |||||||
Sbjct 1932 GAC--ACCGTTAACCTTCAGACCTTGAGGTCTATCTCCTCCT-ACAGCTGGAGCAAACTA 1988
Query 2097 AAACC-TGAG-TTGCTCATAAATCTTCGAGATTTGG 2130
|| || |||| || ||||||||||||| || ||||
Sbjct 1989 AA-CCATGAGGTTT-TCATAAATCTTCGGGACTTGG 2022
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112213861770
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5