BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G46658.1
Length=2026
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1 1086 0.0
Ahg494174 jgi|Araly1|494174|fgenesh2_kg.7__3607__AT5G38040.1 464 1e-129
Ahg347751 jgi|Araly1|347751|fgenesh1_pg.C_scaffold_5001143 375 5e-103
Ahg494179 jgi|Araly1|494179|fgenesh2_kg.7__3612__AT5G37950.2 315 1e-84
Ahg898513 jgi|Araly1|898513|Al_scaffold_0005_2479 76.8 6e-13
> Ahg485040 jgi|Araly1|485040|fgenesh2_kg.5__1032__AT3G46670.1
Length=1588
Score = 1086 bits (588), Expect = 0.0
Identities = 835/953 (88%), Gaps = 22/953 (2%)
Strand=Plus/Minus
Query 204 ACTTGGAATGGTTGAAAAAGGAATCTTGATGCTTTGTGTGTTTTAGTAGACACAACTGTC 263
||||||||| ||||||| ||||||||| | | |||| ||||||||||| | |||| |||
Sbjct 1588 ACTTGGAATAGTTGAAAGAGGAATCTTCAAGTTTTG-GTGTTTTAGTATAGACAAAAGTC 1530
Query 264 TTCATAGAGTCCTTATGAAGTGTACAAACTCTTCTAGCGAGTTGTGTGAAGAGCCTCCAC 323
|||| |||||||| ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1529 TTCAGAGAGTCCTCATGAAGTGTACAAACTCCTCTAGCGAGTTGTGTGAAGAACCTCCAC 1470
Query 324 TTTTAACAGAGGCTCTAAGTTGCTCTTTTAAACTGA-AAGCTCTCTTCCTCATCTCCTCT 382
|| ||||||||||||||||||||||||| ||||||| || |||||||||||||||||| |
Sbjct 1469 TTATAACAGAGGCTCTAAGTTGCTCTTTCAAACTGACAA-CTCTCTTCCTCATCTCCTTT 1411
Query 383 CCTTCTTCGTCAACCATTAACCTCTTCACAGCTCTCTCGACCACTCCTCTGTCTAGCTCA 442
|||||||| || ||||||||||||| ||||||| ||||||| ||||||||||||| |||
Sbjct 1410 CCTTCTTCCTCCACCATTAACCTCTGCACAGCTTTCTCGACTGCTCCTCTGTCTAGATCA 1351
Query 443 CCCTCCACTTGAATCCCAATTTTCCATACACACTCCAAGTATCTAGCGTTCACCTTTTGA 502
|||||||||||||||||||||||||| |||||||||||||| || || ||||||||||||
Sbjct 1350 CCCTCCACTTGAATCCCAATTTTCCAAACACACTCCAAGTACCTCGCATTCACCTTTTGA 1291
Query 503 TCACCCGAAAATGGCCTGCAGATCATTGGAACTCCTTGGCCGATGCTTTCTAGTGTCGAG 562
|||| ||||| ||| |||| |||||||||||||||| |||||||| ||||||||||||
Sbjct 1290 TCACTGGAAAACGGCTTGCAAATCATTGGAACTCCTTCCCCGATGCTCTCTAGTGTCGAG 1231
Query 563 TTCCATCCACAATGGCTCCAAAACCCTCCTACTGCAGGATGAGAAAGTACTTCCTTCTGT 622
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1230 TTCCATCCACAGTGGCTCCAAAACCCTCCTACTGCAGGGTGAGAAAGTACTTCCTTCTGT 1171
Query 623 GGAGCCCATTTCACAATGTAACCTCGGTCCAAAACCATCTTACTAAACT-CTTCAGGCAT 681
||||||||||||||||||||||| || || ||| ||||||||||||| ||| |||||
Sbjct 1170 GGAGCCCATTTCACAATGTAACCCCGACCCGAAATTATCTTACTAAACTCCTT-AGGCAA 1112
Query 682 GGACTCTATCCACTCG--GAACCAGGTATTGACCCTGGTCGGATCACCCATAAGAAGTGT 739
| ||||||||| | | |||||| ||| ||| ||||| || |||||||| ||||| |||
Sbjct 1111 GTTCTCTATCCA-T-GTAGAACCACGTACTGATCCTGGCCGAATCACCCACAAGAACTGT 1054
Query 740 TGGTTGCTAGC-AGCCAATCCTGACGCGACT-TCCATTATCTCGTTGATTTCCATTAAAG 797
||||||||| | | ||||||| | || | | ||||| | ||| ||||||||||| ||||
Sbjct 1053 TGGTTGCTA-CTATCCAATCCCAAAGC-AGTCTCCATCACCTCATTGATTTCCATCAAAG 996
Query 798 CTATGCTTCCCATGCTTATGTATATCACCGAGTTTACCTTTTGTTTGTTCAACCATTCGA 857
||| |||||||| ||||| | |||| || || ||| |||||||||||||||||||||||
Sbjct 995 CTAAGCTTCCCAAGCTTACGAATATTACAGAATTTTTCTTTTGTTTGTTCAACCATTCGA 936
Query 858 TGCAGCTCTTGTTCTCTTCAAGCAGACTTGTAGGAGCT-GAGGCCACCATGTGAAGAGGG 916
| |||||||||||||||||||||||||||||||||| | |||||||||| ||||| ||||
Sbjct 935 TACAGCTCTTGTTCTCTTCAAGCAGACTTGTAGGAG-TCGAGGCCACCAGGTGAACAGGG 877
Query 917 CCTATAGGATACACTGGAATTTGTAGCTGTTGTTGTTGCAGAAAAGACAGAGATGAGCTC 976
||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||
Sbjct 876 CCTATAGGATACATTGGAATTTTTAGC---TGTTGTTGCAGGCGAGACAGAGATGAGCTC 820
Query 977 TCTAGACAGCTCGCAGTGTTGATTATCACCGAGGAAGCTGTCCGTTTGTCAACTGTATTC 1036
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 819 TCTAGACAGCTCGCAGTGTTGATTATCACAGAGGAAGCTGTCCGTGTGTCAACTGTATTC 760
Query 1037 CTATACACCTCCATTATGCTCTCTAATGATGCA-AACCGTGAAACTGGAAAGTCTTTATA 1095
||||||| |||||||| || ||||||||||| || ||||||| ||||||||||| |
Sbjct 759 CTATACAGTTCCATTATACTTTCTAATGATGCCCAAT-GTGAAACCGGAAAGTCTTTGCA 701
Query 1096 TCTCAAGGGATAAAACTCCGGAACTAGCTC-TTCTTGTTGTCCTTTAGTTTCT 1147
||||| ||||| |||||| || |||||||| || |||||||||||| | ||||
Sbjct 700 TCTCAGGGGATGAAACTCTGGCACTAGCTCGTT-TTGTTGTCCTTTGGGTTCT 649
Score = 584 bits (316), Expect = 8e-166
Identities = 433/490 (88%), Gaps = 5/490 (1%)
Strand=Plus/Minus
Query 1226 CTTTCAAGGGAG-CTTGGACATTGTTTGCATATAGTTTGTCAAATACAGAGCGGCAAGCG 1284
|||||||||||| | ||||||||||||||| |||||||| ||||||||||| ||| |
Sbjct 650 CTTTCAAGGGAGAC-AAGACATTGTTTGCATAGAGTTTGTCGAATACAGAGCGACAAACA 592
Query 1285 AAAGCCGTGGCACTTGTTGTGCTGAAAATGATGTTTGGAAGCTTACACTCTTTGGCTGCA 1344
||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||| |
Sbjct 591 AAAGCCGTGGCACTTGTTGTGCTGAAAATAACGTTTGGAAGCTTATACTCTTTGGCTGTA 532
Query 1345 GCTTCAGCAAAGTACATGAACTCATCGTAGATGACACATGAGATCTCATTACTTTGTTGC 1404
|||||||||||||||| |||||| || |||| |||||||| ||||||||||| |||||||
Sbjct 531 GCTTCAGCAAAGTACACGAACTCGTCATAGACGACACATGCGATCTCATTACCTTGTTGC 472
Query 1405 AGCACCAACTGACCCAAACAGTCCTTGAAGCTCACCTTACACTCTTTGTTGAGCTTAAAC 1464
||| |||||||||||||||||| || |||||||||| ||||||||||||||||||| |
Sbjct 471 TGCAACAACTGACCCAAACAGTCTTTAAAGCTCACCTGACACTCTTTGTTGAGCTTATGC 412
Query 1465 AGAAACTGTATTGGTCCGAGATTCTTGAAATCAGACTCTGGTAAGCTTTCTGGAATGGTG 1524
| ||||| || ||| ||||||||||| ||||||||||| ||||||||||| ||||| |||
Sbjct 411 ATAAACTCTACTGGCCCGAGATTCTTAAAATCAGACTCCGGTAAGCTTTCCGGAATAGTG 352
Query 1525 ACGAACTGAAAATCATGAGTGAAGTCATCTGAAGGGCTAAAGTAATTGAACTTAGTCTGA 1584
|| ||||||||||| |||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct 351 ACAAACTGAAAATC---AGTGAAGTCATCTGAAGGGCTAAAATAATTAAACTTGGTCTGA 295
Query 1585 ACAACTGTGATCGAGAAACCCTTTAAGTGAAGGGTTTTGGCAAGTTGCATCATTGGAGAT 1644
||| |||||| |||||||||||||||| ||||||||| || ||||||||||||||||||
Sbjct 294 GCAATTGTGATTGAGAAACCCTTTAAGTAAAGGGTTTTTGCGAGTTGCATCATTGGAGAT 235
Query 1645 ATATGTCCTTGTGCTGGAAATGGAACCAACACTACGCTTCTCCTTGCAGGCTTTTCCTCC 1704
||||||||||| ||||||| ||||| |||| ||| |||||||| || ||||||||||||
Sbjct 234 ATATGTCCTTGAGCTGGAACTGGAATTAACAATACCCTTCTCCTCGCCGGCTTTTCCTCC 175
Query 1705 ATTCCCAAAA 1714
||| | ||||
Sbjct 174 ATTTCGAAAA 165
> Ahg494174 jgi|Araly1|494174|fgenesh2_kg.7__3607__AT5G38040.1
Length=1329
Score = 464 bits (251), Expect = 1e-129
Identities = 608/773 (79%), Gaps = 53/773 (7%)
Strand=Plus/Minus
Query 302 GAGTTGTGTGAAGAGCCTCCA-CTTTTAACAGAGGCTCTAAGTTGCTCTTTTAAACTGAA 360
||||| | |||||||||| | | | ||||||| || | |||| |||||| ||| | |
Sbjct 1301 GAGTTATATGAAGAGCCTTGAGC-TAAAACAGAGTCTTTGAGTTTCTCTTTCAAATTTAG 1243
Query 361 AGCTC-TCTTCCTCATCTCCTCTCCTTCTTCGTCAACCATTAACCTCTTCACAGCTCTCT 419
||||| || || ||||||| ||||||||||| || ||||||||||||||||||||| | |
Sbjct 1242 AGCTCTTC-TCTTCATCTCTTCTCCTTCTTCATCGACCATTAACCTCTTCACAGCTTTTT 1184
Query 420 CGACCACTCCTCTGTCTAGCTCACCCTCCACTTGAATCCCAATTTTCCATACACACTCCA 479
||||| | ||||| |||||||||||||| ||||||||||| | |||||||||||| ||||
Sbjct 1183 CGACCGCGCCTCTCTCTAGCTCACCCTCTACTTGAATCCCTACTTTCCATACACATTCCA 1124
Query 480 AGTATCTAGCGTTCACCTTTTGATCACCCG-AAAATGGCCTGCAGATCATTGGAACTCCT 538
|||| || || ||| ||||||||||| | |||| || || || |||||||||||||||
Sbjct 1123 AGTACCTTGCATTCCCCTTTTGATCAGTTGTAAAA-GGTCTACATATCATTGGAACTCCT 1065
Query 539 TGGCCGATGCTTTCTAGTGTCGAGTTCCATCCACAATGGCTCCAAAACCCTCCT-ACTGC 597
| |||| ||||||||| ||||| |||||||| ||||| ||||||||| || || || ||
Sbjct 1064 TCACCGAGGCTTTCTAGAGTCGAATTCCATCCGCAATGACTCCAAAACGCT-CTAACCGC 1006
Query 598 AGG-ATGAGAAAGTACTTCCTTCTGTGGAGCCCATTTCACAATGTAACCTCGGTC--CA- 653
|| ||| | ||| |||| |||||| || ||||||||||| ||||||||||| || |
Sbjct 1005 -GGAATGTGCAAGCACTTGCTTCTGCGGCGCCCATTTCACTATGTAACCTCGATCTGTAG 947
Query 654 AAACCATC-T-TACTA-AACTCTTCAGGCATG-GACTCTATCCACTCGGAACCAGGT-AT 708
|||||| | | | | |||||||| || | || | | | || |||||| | |
Sbjct 946 TTACCATCTTCTTCAACAACTCTTC-CTCA-GAGA-T-T-T-CA----GAACCA-CTAAC 898
Query 709 TGACCCTGGTCGGATCACCCATAAGAAGTGTTGGTTGCTAGC-AGCCAATCCTGACGCGA 767
|| |||||||| |||||||| |||||||||||||| ||| | | |||| || || || |
Sbjct 897 GGATCCTGGTCGAATCACCCACAAGAAGTGTTGGTTACTA-CTATCCAACCCCGAAGCCA 839
Query 768 CT-TCCATTATC-TCGTTGA-TTTCCATTAAAGCT-ATGCTTCCCATGCTTATGTATATC 823
| |||| | | || || | ||||||| | || | | |||||||| |||||||||||||
Sbjct 838 -TCTCCAACA-CTTC-TTTAGTTTCCATCATAG-TAAAGCTTCCCAAGCTTATGTATATC 783
Query 824 ACCGAGTTTACCTTTTGTTTGTTCAACCATTCGATGCAGCTCTTGTTCTCTTC-AAGCAG 882
|||||| | |||||||||||||| |||||| |||||||||| |||||||| || ||
Sbjct 782 ACCGAGCTCGGCTTTTGTTTGTTCAGCCATTCTATGCAGCTCTCATTCTCTTCTAAA-AG 724
Query 883 ACTTGTA-G-G-AGCTGAGGCCACCATGTGAAGAGGGCCTATAGGATACACTGGAATTTG 939
||| ||| | | ||| || || |||||||||||||||||||||||||||| ||||| |
Sbjct 723 ACTCGTACGCGGAGCAGAAACCGCCATGTGAAGAGGGCCTATAGGATACACCGGAATATC 664
Query 940 TAGCTGTTGTTGTTGCAGAAAAGACAGAGATGAGCTCTCTAGACAGCTCGCA--GTGTTG 997
||| | | |||||| || || || ||||||| |||||||||| | || | ||||||
Sbjct 663 TAG-T-TC-TTGTTGAAGCCAATCCAAAGATGAGATCTCTAGACA-C-CGAACTGTGTTG 609
Query 998 ATTATCACCGAGGAAGCTGTCCGTTTGTCAAC-TGTATTCCTATACACCTCCA 1049
|||||||| ||||||||||||| ||| | ||| ||||||| || ||| |||||
Sbjct 608 ATTATCACAGAGGAAGCTGTCCCTTTAT-AACATGTATTCTTAAACAACTCCA 557
> Ahg347751 jgi|Araly1|347751|fgenesh1_pg.C_scaffold_5001143
Length=753
Score = 375 bits (203), Expect = 5e-103
Identities = 265/294 (90%), Gaps = 7/294 (2%)
Strand=Plus/Minus
Query 769 TTCCATTATCTCGTTGATTTCCATTAAAGCTAT-GCTTCCCATGCTTATGTATATCACCG 827
|||||| | ||| || ||||| ||||||| || |||||||| ||||||||||||||| |
Sbjct 723 TTCCATCACCTCATTAATTTCTGTTAAAGC-ATAGCTTCCCAAGCTTATGTATATCACTG 665
Query 828 AGTTTACCTTTTGTTTGTTCAACCATTCGATGCAGCTCTTGTTCTCTTCAAGCAGACTTG 887
|||||||||||||||||||||||||||| || || || ||||||||||||||||||||||
Sbjct 664 AGTTTACCTTTTGTTTGTTCAACCATTCCATACAACTTTTGTTCTCTTCAAGCAGACTTG 605
Query 888 TAGGAGCTGAGGCCACCATGTGAAGAGGGCCTATAGGATACACTGGAATTTGTAGCTGTT 947
||| ||| |||||||||| |||||||||||||||||||||||||||||||| |||| |
Sbjct 604 TAGAAGCCGAGGCCACCAGGTGAAGAGGGCCTATAGGATACACTGGAATTTTTAGC---T 548
Query 948 GTTGTTGCAGAAAAGACAGAGATG-AGCTCTCTAGACAGCTCGCAGTGTTGATTATCACC 1006
||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 547 GTTGTTGCAGAAATGACAGAGATGCA-CTCTCTAGACAGCTCGCAGTGTTGATTATCACA 489
Query 1007 GAGGAAGCTGTCCGTTTGTCAACTGTATTCCTATACACCTCCATTATGCTCTCT 1060
|| |||||||||||||||||||||||||||||||||| ||||||| |||| |||
Sbjct 488 GATGAAGCTGTCCGTTTGTCAACTGTATTCCTATACAGCTCCATTGTGCTTTCT 435
Score = 348 bits (188), Expect = 1e-94
Identities = 264/301 (88%), Gaps = 4/301 (1%)
Strand=Plus/Minus
Query 1226 CTTTCAAGGGAGCT-TGGACATTGTTTGCATATA-GTTTGTCAAATACAGAGCGGCAAGC 1283
||||| |||||||| | | | |||||| |||| | | |||| ||||||||||| ||| |
Sbjct 436 CTTTCGAGGGAGCTAT-GCCGTTGTTTCCATAGACG-TTGTTGAATACAGAGCGACAAAC 379
Query 1284 GAAAGCCGTGGCACTTGTTGTGCTGAAAATGATGTTTGGAAGCTTACACTCTTTGGCTGC 1343
||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||
Sbjct 378 AAAAGCCGTGGCACTTGTTGTGCTGAAAATAACGTTTGGAAGCTTAAACTCTTTGGCTGC 319
Query 1344 AGCTTCAGCAAAGTACATGAACTCATCGTAGATGACACATGAGATCTCATTACTTTGTTG 1403
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 318 AGCTTCAGCAAAGTACAAGAACTCGTCGTAGATGACACATGAGATCTCATTACTTTGTTG 259
Query 1404 CAGCACCAACTGACCCAAACAGTCCTTGAAGCTCACCTTACACTCTTTGTTGAGCTTAAA 1463
||||| |||||||||||| ||||||||||||||||||| |||||| ||||||||||||
Sbjct 258 CAGCAGCAACTGACCCAAGCAGTCCTTGAAGCTCACCTGGCACTCTATGTTGAGCTTAAG 199
Query 1464 CAGAAACTGTATTGGTCCGAGATTCTTGAAATCAGACTCTGGTAAGCTTTCTGGAATGGT 1523
|||||| | || || ||||||| || ||| ||||||| ||||||||||| ||||| ||
Sbjct 198 CAGAAATTTTAGTGCCCCGAGATCCTCAAAAGCAGACTCCGGTAAGCTTTCCGGAATAGT 139
Query 1524 G 1524
|
Sbjct 138 G 138
Score = 137 bits (74), Expect = 3e-31
Identities = 113/131 (86%), Gaps = 5/131 (4%)
Strand=Plus/Minus
Query 1579 GTCTGAACAACTGTGATCGAGAAA-CCCTT-TAAGTGAAGGGTTTTGGCAAGTTGCATCA 1636
||||||| ||||||||| |||||| ||||| || ||||||||||| |||||||||||||
Sbjct 129 GTCTGAAAAACTGTGATTGAGAAACCCCTTCGAA-TGAAGGGTTTTCGCAAGTTGCATCA 71
Query 1637 TTGGAGATATATGTCCTTGTGCTGGAAA-TGGAACCAACACTACGCTTCTCCTTGCAGGC 1695
||||||||||||||||||| |||| ||| || ||||||||| || ||| | || || ||
Sbjct 70 TTGGAGATATATGTCCTTGAGCTG-AAACTGAAACCAACACGACCCTTTTTCTCGCCTGC 12
Query 1696 TTTTCCTCCAT 1706
|||||||||||
Sbjct 11 TTTTCCTCCAT 1
> Ahg494179 jgi|Araly1|494179|fgenesh2_kg.7__3612__AT5G37950.2
Length=1053
Score = 315 bits (170), Expect = 1e-84
Identities = 323/394 (82%), Gaps = 21/394 (5%)
Strand=Plus/Minus
Query 1249 TTTGCATATAGTTTGTCAAAT-ACAGAGCG-GCAAGCGAAAGCCGTGGCACTTGTT--GT 1304
|||||||| |||||| || || ||||||| | |||| |||||||| ||| || || ||
Sbjct 383 TTTGCATAGAGTTTG-CACATGGCAGAGCGAG-AAGCAAAAGCCGTTGCA-TT-TTCGGT 328
Query 1305 GCTGAAAATGATGTTT-GGAAGCTTACACTCTTTGGCTGCAGCTTCAGCAAAGTACATGA 1363
|||||||| | ||| ||||| | | |||||||||||||||||||||||||||||||||
Sbjct 327 ACTGAAAAT-AACTTTGGGAAGGTCAAACTCTTTGGCTGCAGCTTCAGCAAAGTACATGA 269
Query 1364 ACTCATCGTAGATGACACATGAGATCTCATTACTT-T-GTTGCAGCACCAACTGACCCAA 1421
|||| |||||||||||||||| |||||| || ||| | |||||| || ||||||||||||
Sbjct 268 ACTCGTCGTAGATGACACATGCGATCTC-TT-CTTGTTGTTGCAACAACAACTGACCCAA 211
Query 1422 ACAGTCCTTGAAGCTCACCTTACACTCTTTGTTGAGCTTAA-ACAGAAACTGTATTGGTC 1480
||| | ||||||||| | || |||||||||||||| |||| | |||||| | ||| |
Sbjct 210 ACACTTCTTGAAGCTAATCTCACACTCTTTGTTGATTTTAATA-AGAAACCAAACTGGCC 152
Query 1481 CGAGATTCTTGAAATCAGACTCTGGTAAGCTTTCTGGAATGGTGACGAACTGAAAATCAT 1540
| |||||||| ||||| || |||||||||| ||||| ||||||| ||||||||||||
Sbjct 151 CTAGATTCTTCAAATCCGAGGCTGGTAAGCTCTCTGGGATGGTGATAAACTGAAAATCA- 93
Query 1541 GAGTGAAGTCATCTGAAGGGCTAAAGTAATTGAACTTAGTCTGAACAACTGTGATCGAGA 1600
| ||||| | ||||||| | |||||||||||||| |||||| ||||||| || ||||
Sbjct 92 GCC--AAGTCTTTTGAAGGGTTTAAGTAATTGAACTTTGTCTGAGCAACTGTAATGGAGA 35
Query 1601 AACCCTTTAAGTGA-AGGGTTTTGGCAAGTTGCA 1633
|||||||||| | | |||| | | ||||||||||
Sbjct 34 AACCCTTTAAAT-ATAGGGCTCTCGCAAGTTGCA 2
> Ahg898513 jgi|Araly1|898513|Al_scaffold_0005_2479
Length=1392
Score = 76.8 bits (41), Expect = 6e-13
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 524 ATCATTGGAACTCCTTGGCCGATGCTTTCTAGTGTCGAGTTCCATCCACAATG-GCTCCA 582
||||||||||| |||| | |||||||||||||||||||||||||||||||| | ||||
Sbjct 1112 ATCATTGGAACACCTTCACATATGCTTTCTAGTGTCGAGTTCCATCCACAATGCG-TCCA 1054
Query 583 AAA 585
|||
Sbjct 1053 AAA 1051
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76180490000
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5