BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G46680.1
Length=1350
Score E
Sequences producing significant alignments: (Bits) Value
Ahg897491 jgi|Araly1|897491|Al_scaffold_0005_1457 1256 0.0
Ahg897487 jgi|Araly1|897487|Al_scaffold_0005_1453 1230 0.0
Ahg485042 jgi|Araly1|485042|fgenesh2_kg.5__1034__AT3G46690.1 1131 0.0
Ahg937387 jgi|Araly1|937387|scaffold_501578.1 1000 0.0
Ahg897494 jgi|Araly1|897494|Al_scaffold_0005_1460 965 0.0
Ahg485039 jgi|Araly1|485039|fgenesh2_kg.5__1031__AT3G46650.1 841 0.0
> Ahg897491 jgi|Araly1|897491|Al_scaffold_0005_1457
Length=1299
Score = 1256 bits (680), Expect = 0.0
Identities = 868/957 (91%), Gaps = 19/957 (2%)
Strand=Plus/Plus
Query 10 ATGGAAGAGAAGAAAAGGATAGTGTTAGTTCCGGTTCCAGCACAAAGACATGTAACTCCA 69
||||||| ||||| |||||| ||||| ||||| |||||||||||| | || |||||||||
Sbjct 1 ATGGAAGCGAAGAGAAGGATCGTGTTGGTTCCAGTTCCAGCACAAGGTCACGTAACTCCA 60
Query 70 ATGATGCAGCTTGGCACAGCCCTAAACATGAAGGGCTTCTCTATTACTGTTGTTGAAGGA 129
|||||||||||||| | |||||| ||| ||||||||||||| ||||| |||||||| |||
Sbjct 61 ATGATGCAGCTTGGAAAAGCCCTGAACTTGAAGGGCTTCTCAATTACAGTTGTTGAGGGA 120
Query 130 CAGTTCAATAAAGTAAG--C-TCATCTCAAAACTTTCCTGGTTTTCAATTTGTAACCATA 186
|| ||||| |||||||| | || ||||||||||||||||||||| ||||||| ||||||
Sbjct 121 CAATTCAACAAAGTAAGCTCTTCTTCTCAAAACTTTCCTGGTTTTGAATTTGTTACCATA 180
Query 187 CCAGATACAGAGAGCTTGCCAGAGTCTGTGCTCGAGAGACTCGGACCGGTCGAGTTTTT- 245
|| | | ||||||| ||||||||||| || ||||||||||||||| ||||||||||
Sbjct 181 CC----A-A-AGAGCTTACCAGAGTCTGTACTTGAGAGACTCGGACCGATCGAGTTTTTG 234
Query 246 ATTCGAGATCAACAAAACCAGTGAGGCAAGCTTCAAGGACTGTATAAG-GCAGTCGTTGC 304
| | ||| |||||||||||||||||||||| |||||||||||||| || |||| |||||
Sbjct 235 A-TAGAGCTCAACAAAACCAGTGAGGCAAGTTTCAAGGACTGTAT-AGCTCAGTTGTTGC 292
Query 305 TGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAGTAT-ATGTACTTCTGTGGA 363
|||||||||| |||||||| || ||||||||||||||||| | | |||||||||| |||
Sbjct 293 TGCAACAAGGAAATGATATTGCTTGTATCATCTACGACGAAT-TCATGTACTTCTCTGGT 351
Query 364 GCTGCAGCTAAGGAGTTCAACCTTCCTAGTGTAATATTCAGCAC-ACAAAGTGCTACT-A 421
|||||||||||||||||||| |||| ||| | || |||||||| | |||||||| | |
Sbjct 352 GCTGCAGCTAAGGAGTTCAAGATTCCCAGTTTCATCTTCAGCACTTC-AAGTGCTA-TCA 409
Query 422 ATCAAGTTTCCCGTTGCGTTTTAAGAAAACTCAGTGCCGAGAAGTTCTTGGTGGACATGG 481
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 410 ATCAAGTTTCCCGTTGCGTTTTAAGCAAACTCAGTGCCGAGAAGTTCTTGGTCGACATGG 469
Query 482 AAGATCCTGAAGTGCAGGAAACGTTGGTGGAAAATTTGCATCCATTAAGATACAAAGACC 541
||||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||||
Sbjct 470 AAGATCCGGAAGTGCAAGAAAAGCTGGTGGAAAATTTGCATCCATTAAGATACAAAGACC 529
Query 542 TACCAACTTCAGGAGTTGGGCCACTAGATCGATTATTTGAGCTCTGTAGGGAAATAGTCA 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 530 TACCAACTTCAGGAGTTGGGCCACTAGATCGATTATTTGAGCTCTGTAGGGAAATAGTCA 589
Query 602 ACAAAAGAACAGCTTCCGCTGTTATCATCAACACAGTGAGATGTCTAGAGAGCTCGTCTC 661
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||
Sbjct 590 ACAAAAGAACAGCTTCCGCTGTTATCATCAACACGGTGAAATGTCTAGAGAGCTCACCTC 649
Query 662 TGAAACGTCTGCAACATGAACTCGGGATTCCGGTGTACGCATTAGGCCCTCTTCACATTA 721
||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 650 TGACACGGCTGCAACATGAACTCGGAATTCCGGTATACGCATTAGGCCCTCTTCACATTA 709
Query 722 CAGTTTCAGCAGCTTCTAGTTTACTGGAAGAGGACAGGAGCTGCGTTGAATGGTTGAACA 781
||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||
Sbjct 710 CAGTTTCAGCAGCTTCTGGTTTATTGGAAGAGGACAGGAGCTGTATTGAATGGCTGAACA 769
Query 782 AGCAAAAACCGAGGTCAGTCGTTTACATAAGCTTGGGGAGCGTAGTTCAAATGGAAACCA 841
|||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||||||
Sbjct 770 AGCAAAAACCGAGGTCAGTCATATACATAAGTTTGGGGAGCATAGTTCAAATGGAAACCA 829
Query 842 AAGAAGTGTTAGAGATGGCTCGGGGTTTATTTAATAGCAACCAGCCTTTCTTATGGGTCA 901
|||||||||| ||||||||| |||| || | |||||||||||||||||||||||||||||
Sbjct 830 AAGAAGTGTTGGAGATGGCTTGGGGATTGTCTAATAGCAACCAGCCTTTCTTATGGGTCA 889
Query 902 TTCGGCCTGGCTCTATCGCAGGCTCCGAATGGATAGAGTCACTGCCAGAGGAAGTCA 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 TTCGGCCTGGCTCTATCGCAGGCTCCGAATGGATAGAGTCACTGCCAGAGGAAGTCA 946
Score = 436 bits (236), Expect = 1e-121
Identities = 306/339 (90%), Gaps = 7/339 (2%)
Strand=Plus/Plus
Query 1006 ATAGAAGTACTTGGACATCCT-GCAGTGGGAGGATTCTGGAGCCACTGTGGATGGAACTC 1064
|||| ||||||||||||| || ||||||||||| ||||||||||||||||||||||||||
Sbjct 947 ATAG-AGTACTTGGACAT-CTCGCAGTGGGAGGCTTCTGGAGCCACTGTGGATGGAACTC 1004
Query 1065 AACGCTTGAAAGCATTGTGGAAGGAGTTCCAATGATATGCAGGCCCTTTC-ATGGCGAGC 1123
||| || ||||||||||||||||||||||||||||| |||||| |||||| | || ||||
Sbjct 1005 AACACTCGAAAGCATTGTGGAAGGAGTTCCAATGATCTGCAGG-CCTTTCGACGGGGAGC 1063
Query 1124 AAAAGTTAAACGCACTGTGTTTAGAGAGTATTTGGAGAATAGGGTTTCAGGTGCAAGGTA 1183
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1064 AAAAGTTAAACGTACTGTCTTTAGAGAGTATTTGGAGAATAGGGTTTCAGGTGCAAAGTG 1123
Query 1184 AGGTAGAGAGGGGAGGGGTCGAGAGAGCTGTGAAGAGGTTGATAGTGGATGAAGAAGGTG 1243
||||||| || |||||||||||||||||||||||||| ||||| || || ||||| ||||
Sbjct 1124 AGGTAGAAAGAGGAGGGGTCGAGAGAGCTGTGAAGAGATTGATTGTTGAAGAAGATGGTG 1183
Query 1244 C-AGACATGAGAGAGAGAGCCCTTGTTTTAAAAGAGAATCTCAAAGCCTCTGTAAGAAAT 1302
| | | ||||| |||||||||||| ||||||||||||||||||||||| ||||||||| |
Sbjct 1184 CCAAA-ATGAGGGAGAGAGCCCTTTTTTTAAAAGAGAATCTCAAAGCCGCTGTAAGAAGT 1242
Query 1303 GGAGGCTCCTCATACAACGCATTGGAGGAGATCGTTAAC 1341
||||||||||||||||||||||| || ||||| || |||
Sbjct 1243 GGAGGCTCCTCATACAACGCATTAGAAGAGATTGTCAAC 1281
> Ahg897487 jgi|Araly1|897487|Al_scaffold_0005_1453
Length=1359
Score = 1230 bits (666), Expect = 0.0
Identities = 1135/1357 (84%), Gaps = 50/1357 (4%)
Strand=Plus/Plus
Query 1 ATGGAGAAAATGGAAGAGAAGAAAAGGATAGTGTTAGTTCCGGTTCCAGCACAAAGACAT 60
||| |||||||||||| ||||| ||||||||||||||||||||||||| |||| | |||
Sbjct 1 ATGAAGAAAATGGAAGCGAAGAGAAGGATAGTGTTAGTTCCGGTTCCATTACAAGGTCAT 60
Query 61 GTAACTCCAATGATGCAGCTTGGCACAGCCCTAAACATGAAGGGCTTCTCTATTACTGTT 120
|||||||||||||||| ||||| | ||| || || |||||||| |||| |||||||||
Sbjct 61 ATAACTCCAATGATGCAACTTGGGAAAGCTCTTTACTTGAAGGGCCTCTCAATTACTGTT 120
Query 121 GTTGAAGGACAGTTCAATAAAGTAAG--CT-CATCTCAAAACTTTCCTGGTTTTCAATTT 177
||||| |||||||||||| |||||| || | |||||| |||| |||||||||||||||
Sbjct 121 GTTGAGGGACAGTTCAATCGAGTAAGCTCTCCTTCTCAACACTTCCCTGGTTTTCAATTT 180
Query 178 GTAACCATACCAGATACAGAGAGCTTGCCAGAGTCTGTGCTCGAGAGACTCGGACCGGTC 237
|| |||||||||| | | ||||| |||||||| | |||||||||||||| | ||
Sbjct 181 GTTACCATACCAG----A-A-AGCTTACCAGAGTCCGAACTCGAGAGACTCGGGGCATTC 234
Query 238 GAGTTTTTATTC-G-AGATCAACAAAACCAGTGAGGCAAGCTTCAAGGACTGTATAAGGC 295
| |||| | | | |||| |||||||| |||||||||||||||||||||||||| ||||
Sbjct 235 CA--TTTTGTGCTGAAGATTAACAAAACAAGTGAGGCAAGCTTCAAGGACTGTATTAGGC 292
Query 296 AGTC-GTTGCTGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAGTAT-ATGTA 353
|| | ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 293 AG-CTGTTGCGGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAGT-TCATGTA 350
Query 354 CTTCTGTGGAGCTGCAGCTAAGGAGTTCAACCTTCCTAGTGTAATATTCAGCACACAAAG 413
|||||||||||||||||||| ||| || || ||||| | ||| || || |||| |||||
Sbjct 351 CTTCTGTGGAGCTGCAGCTACGGAATTAAAGCTTCCCAATGTCATCTTGTGCACTCAAAG 410
Query 414 TGCTACTAATCAAGTTTCCCGTTGCGTTT-TAAGAAAACTCAGTGCCGAGAAGTTCTTGG 472
|||||| ||||| ||||| || || |||| || | ||||||| |||||||||||||||||
Sbjct 411 TGCTACAAATCATGTTTCACGCTGTGTTTATA-GCAAACTCAATGCCGAGAAGTTCTTGG 469
Query 473 TGGACATGGAAGATCCTGAAGTGC-AGGA-AACGTTGGTGGAAAATTTGCATCCATTAAG 530
| |||||||||||||||||| | | || | || || |||||| |||||||||||||||||
Sbjct 470 TCGACATGGAAGATCCTGAACTACGAG-ACAAGGT-GGTGGATAATTTGCATCCATTAAG 527
Query 531 ATACAAAGACCTACCAAC-TTCAGGAGTT-GGGCCACTAGATCGATTATTTG-AGCTCTG 587
||||||||| || || | ||||| | || |||||| |||| | | | | || || || |
Sbjct 528 ATACAAAGATCT-CCTGCCTTCAG-ATTTTGGGCCATTAGAACCAGT-TCTGGAGTTCCG 584
Query 588 TAGGGAAATAGTCAACAAAAGAACAGCTTCCGCTGTTATCATCAACAC-AGTGAGATGTC 646
| ||||| |||| ||||||||||||||||| ||| | ||| | ||||| | || ||||
Sbjct 585 TCGGGAAGTAGTTAACAAAAGAACAGCTTCAGCTCTCATCCTTAACACGACC-AGGTGTC 643
Query 647 TAGAGAGCTCGTCTCTGAAACG-TCTGCAACATGAACTCGGGATTCCG-GTGTACGCATT 704
||||||||| ||||||| | | | ||||||| |||||||| |||| | |||||| ||||
Sbjct 644 TAGAGAGCTTGTCTCTGTCATGGT-TGCAACAAGAACTCGGAATTC-GAGTGTACTCATT 701
Query 705 AGGCCCTCTTCACATTACAGTTTCAGCAGCT---TCTAGTTTACTGGAAGAGGACAGGAG 761
|||||||||||||||||||| ||||||| | ||||||||| |||||||||||| |||
Sbjct 702 AGGCCCTCTTCACATTACAGCTTCAGCACCAGGATCTAGTTTAGTGGAAGAGGACATGAG 761
Query 762 CTGCGTTGAATGGTTGAACAAGCAAAAACCGAGGTCAGTCGTTTACATAAGCTTGGGGAG 821
|||| |||||||| ||||||| || ||||||||||||||| | ||| ||||| |||| |
Sbjct 762 CTGCATTGAATGGCTGAACAATCAGAAACCGAGGTCAGTCATATACGTAAGCATGGGAAC 821
Query 822 CGTAGTTCAAATGGAAACCAAAGAAGTGTTAGAGATGGCTCGGGGTTTATTTAATAGCAA 881
| || || ||||||| |||| |||||||| ||||||||| |||| || |||||||||||
Sbjct 822 CATACATCTAATGGAAGCCAAGGAAGTGTTGGAGATGGCTTGGGGGTTGTTTAATAGCAA 881
Query 882 CCAGCCTTTCTTATGGGTCATTCGGCCTGGCTCTATCGCA-GGCTCCGAATGG-ATAGAG 939
||| ||||| ||||||||||| ||| | || || ||| || |||| | ||||| ||||||
Sbjct 882 CCAACCTTTTTTATGGGTCATCCGGTCGGGTTCCATC-CATGGCTTC-AATGGGATAGAG 939
Query 940 TCACTGCCAGAGGAAGTCATTAAGATGGTCTCCGAAAGAGGGTATATTGTGAAATGGGCA 999
||| ||||||| |||||| |||||||| || |||||||| || |||||||| ||||
Sbjct 940 TCATTGCCAGAAGAAGTCGGTAAGATGGCCTTAGAAAGAGGATACATTGTGAAGCAGGCA 999
Query 1000 CCACAGATAGAAGTACTTGGACATCCTGCAGTGGGAGGATTCTGGAGCCACTGTGGATGG 1059
|| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1000 CCGCAGATAGAAGTACTTGGACATCCTGCAGTGGGAGGCTTCTGGAGCCATTGTGGATGG 1059
Query 1060 AACTCAACGCTTGAAAGCATTGTGGAAGGAGTTCCAATGATATGCAGGCCCTTTCATGGC 1119
|||||||| || || || ||||||||||||||||| ||||| |||||||| ||| ||||
Sbjct 1060 AACTCAACACTGGAGAGTATTGTGGAAGGAGTTCCGATGATTTGCAGGCCTTTTAATGGT 1119
Query 1120 GAGCAAAAGTTAAACGCACTGTGTT-TAGAGAGTATTTGGAGAATAGGGTTTCAGGT-GC 1177
||||| | |||||||||| || || |||| | | ||||||| ||||| ||||| | |
Sbjct 1120 GAGCAGAGGTTAAACGCAAAGT-TTATAGAAACTGTTTGGAGTGTAGGGATTCAGCTCG- 1177
Query 1178 AAGGT-AAGGTAGAGAGGGGAGGGGTCGAGAGAGCTGTGAAGAGGTTGATAGTGGATGAA 1236
||||| ||| | || || |||| ||| ||||||||||||||||||||||| |||||||||
Sbjct 1178 AAGGTGAAG-TGGAAAGAGGAGAGGTTGAGAGAGCTGTGAAGAGGTTGATCGTGGATGAA 1236
Query 1237 GAAGGTGCAG-ACATGAGAGAGAGAGCCCTTGTTTTAAAAGAGAATCTCAAAGCCTCTGT 1295
|||||||||| | ||||| ||||||||||||||| |||||||||| ||||||||||||||
Sbjct 1237 GAAGGTGCAGGA-ATGAGGGAGAGAGCCCTTGTTCTAAAAGAGAAGCTCAAAGCCTCTGT 1295
Query 1296 AAGAAATGGAGGCTCCTCATACAACGCATTGGAGGAG 1332
||||| |||||||||||||||||| ||||| || |||
Sbjct 1296 AAGAAGTGGAGGCTCCTCATACAATGCATTAGATGAG 1332
> Ahg485042 jgi|Araly1|485042|fgenesh2_kg.5__1034__AT3G46690.1
Length=1501
Score = 1131 bits (612), Expect = 0.0
Identities = 1119/1359 (82%), Gaps = 54/1359 (4%)
Strand=Plus/Plus
Query 1 ATGGAGAAAATGGAAGAGAAGAAAAGGATAGTGTTAGTTCCGGTTCCAGCACAAAGACAT 60
|||||||||| || ||||||| |||||| ||||||||||| ||| | |||||| | ||
Sbjct 49 ATGGAGAAAAGGGCAGAGAAGCGAAGGATTGTGTTAGTTCCAGTTGCTGCACAAGGTCAC 108
Query 61 GTAACTCCAATGATGCAGCTTGGCACAGCCCTAAACA-TGA-AGGGCTTCTCTATTACTG 118
|| |||| ||||||||||||||| | |||||| || | | | |||||||| |||||||
Sbjct 109 GTTACTCAAATGATGCAGCTTGGAAAAGCCCT--TCAGTTACAAGGCTTCTCAATTACTG 166
Query 119 TTGTTGAAG-GACAGTTCA-ATAAAGTAAG---CTCATCTCAAAACTTTCCTGGTTTTCA 173
| | | || ||||||| | ||| |||| |||||| ||| |||||||||||| |
Sbjct 167 TAGCT-CAGAGACAGTTGACGCAAA-TAAGCTTCTCATCGCAACTTTTTCCTGGTTTTGA 224
Query 174 ATTTGTAACCATACCAGATACAGAGAGCTTGCCAGAGTCTGTGCTC-GAGAGACTCGGAC 232
||||| |||||| | |||||||||| || |||||| || ||| ||| ||||
Sbjct 225 CTTTGTCACCATA-C-----CAGAGAGCTTACCTCAGTCTG-AATCTAAGAAACTAGGAC 277
Query 233 C-GGTCGAGT-TTTTATTCG-AGATCAACAAAACCAGTGAGGCAAGCTTCAAGGACTGTA 289
| | | |||| | | | | | || | |||||||| || ||||||||||||||||| ||||
Sbjct 278 CAGCT-GAGTATCTGA-T-GAAGCTTAACAAAACAAGCGAGGCAAGCTTCAAGGAGTGTA 334
Query 290 TAAGGCAGTCGTTGCTGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAG-TAT 348
|||| |||| ||| |||||||||||||||||||||||||||||||||| ||| || | |
Sbjct 335 TAAGTCAGTTATTGATGCAACAAGGCAATGATATAGCATGTATCATCTATGACAAGCT-T 393
Query 349 ATGTACTTCTGTGGAGCTGCAGCTAAGGAGTTCAACCTTCCTAGTGTAATATTCAGCACA 408
|||||||| ||| |||||||||||| ||||| || ||||||||||| |||||||| ||
Sbjct 394 ATGTACTTTTGTCAAGCTGCAGCTAAAGAGTTTAAGCTTCCTAGTGTCATATTCAGTAC- 452
Query 409 CA-AAGTGCTACTAA-TCAAGTTTCCCGTTGCGTTTTAAGAAAACTCAGTGCCGAGAAGT 466
| |||||||| || |||||||| | || |||||||| ||||||| |||||||||||
Sbjct 453 TAGCAGTGCTAC-AATTCAAGTTTGCTACTGTGTTTTAAGTAAACTCAATGCCGAGAAGT 511
Query 467 TCTTGGTGGACATGGAAGATCCTGAAGTGCAGGA-AACGTTGGTGGAAAATTTGCATCCA 525
||||| | |||||| ||||||||||| |||| || || | | ||||| |||||||||
Sbjct 512 TCTTGATCGACATGAAAGATCCTGAAATGCAAGACAA-GGTATTGGAAGGTTTGCATCCT 570
Query 526 TTAAGATACAAAGACCTACCAACTTCAGGAGTTGGGCCACTA-GATCGA-TTATTTGAGC 583
||||||||||||||| |||||||||||||| |||| ||| || || | | || || |||
Sbjct 571 TTAAGATACAAAGACTTACCAACTTCAGGATTTGGACCATTAGGA-CCACTT-TTGGAGA 628
Query 584 TCTGTAGGGAAATAGTCAACAAAAGAACAGCTTCCGCTGTTATCATCAACACAGTGAGAT 643
| ||||||||| |||| ||||||||||||||||||||| |||||||||| || | ||| |
Sbjct 629 TGTGTAGGGAAGTAGTTAACAAAAGAACAGCTTCCGCTATTATCATCAATACTGCGAGCT 688
Query 644 GTCTAGAGAGCTCGTCTCTGAAACGTCTGCAACATGAACTCGGGATTCCGGTGTACGCAT 703
|||||||||||| |||||| | | |||||||| ||||| || ||||| || |||||||
Sbjct 689 GTCTAGAGAGCTTATCTCTGTCATGGCTGCAACAAGAACTTGGAATTCCAGTTTACGCAT 748
Query 704 TAGGCCCTCTTCACATTACAGTTTCA--G-CAGCTTCTAGTTTACTGGAAGAGGACAGGA 760
||||||||||||||||||||| |||| | | | | | ||||||| ||||||||| ||
Sbjct 749 TAGGCCCTCTTCACATTACAGCTTCATCGCCTGGACCGACTTTACTGCAAGAGGACAAGA 808
Query 761 GCTGCGTTGAATGGTTGAACAAGCAAAAACCGAGGTCAGTCG-TTTACATAAGCTTGGGG 819
|||| ||||||||| |||||||||| ||||| |||||||| | | |||||| |||||||
Sbjct 809 GCTGTGTTGAATGGCTGAACAAGCAGAAACCAAGGTCAGT-GATATACATATGCTTGGGA 867
Query 820 AGCGTAGTTCAAATGGAAACCAAAGAAG-TGTTAGAGATGGCTCGGGGTTTATTTAATAG 878
||| || ||| ||||||||| | | || |||||||||||||| |||| || | ||||||
Sbjct 868 AGCAAAGCTCACATGGAAACC-ATGGAGATGTTAGAGATGGCTTGGGGGTTGTGTAATAG 926
Query 879 CAACCAGCCTTTCTTATGGGTCATTCGGCCTGGCTCTATCGCAGGCTCCGAATGGATAGA 938
|||||| ||||||||||||||||| || ||||||||| |||| |||||||| ||||| ||
Sbjct 927 CAACCAACCTTTCTTATGGGTCATCCGACCTGGCTCTGTCGCTGGCTCCGAGTGGATCGA 986
Query 939 GTCACTGCCAGAGGAAGTCATTAAGATGGTCTCCGAAAGAGGGTATATTGTGAAATGGGC 998
|||| ||||||||||| ||| |||||||||| || |||||||| ||||||||||||||
Sbjct 987 GTCATTGCCAGAGGAAATCAGTAAGATGGTCAAAGATAGAGGGTACATTGTGAAATGGGC 1046
Query 999 ACCACAGATAGAAGTACTTGGACATCCTGCAGTGGGAGGATTCTGGAGCCACTGTGGATG 1058
||| || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 1047 ACCTCAAATAGAAGTACTAGGACATCCTGCAGTGGGAGGCTTCTGGAGCCACTGTGGATG 1106
Query 1059 GAACTCAACGCTTGAAAGCATTGTGGAAGGAGTTCCAATGATATGCAGGCCCTTTC-ATG 1117
||||||||| ||||| || |||| ||||||||| |||||||| || ||||| |||| | |
Sbjct 1107 GAACTCAACACTTGAGAGTATTGCGGAAGGAGTCCCAATGATTTGTAGGCC-TTTCCAAG 1165
Query 1118 GCGAGCAAAAGTTAAACGCACTGTGTTTAGAGAGTATTTGGAGAATAGGGTTTCAGGTGC 1177
|||| || |||||||| ||| ||| | |||| ||| |||||||||||||| ||| | | |
Sbjct 1166 GCGAACAGAAGTTAAATGCAATGTATATAGAAAGTGTTTGGAGAATAGGGATTCTGCTTC 1225
Query 1178 AAGGT-AAGGTAGAGAGG-GGAGGGGTCGAGAGAGCTGTGAAGAGGTTGAT-AGTGGATG 1234
|||| ||| | | || | || || || ||||||||||||||||||||||| | ||||||
Sbjct 1226 GAGGTGAAG-TGG-GAAGAGGCGGTGTAGAGAGAGCTGTGAAGAGGTTGATCA-TGGATG 1282
Query 1235 AAGAAGGTGCAG-ACATGAGAGAGAGAGCCCTTGTTTTAAAAGAGAATCTCAAAGCCTCT 1293
|||||||||||| | ||||| ||||| || |||| |||||||||||| ||||||||||||
Sbjct 1283 AAGAAGGTGCAGGA-ATGAGGGAGAGGGCTCTTGATTTAAAAGAGAAGCTCAAAGCCTCT 1341
Query 1294 GTAAGAAATGGAGGCTCCTCATACAACGCATTGGAGGAG 1332
||||||| ||||||||||||||||||||||||||| |||
Sbjct 1342 GTAAGAAGTGGAGGCTCCTCATACAACGCATTGGATGAG 1380
> Ahg937387 jgi|Araly1|937387|scaffold_501578.1
Length=1412
Score = 1000 bits (541), Expect = 0.0
Identities = 1105/1368 (81%), Gaps = 75/1368 (5%)
Strand=Plus/Plus
Query 1 ATGGAGAAAATGGAAGAGAAGAAAAGGATAGTGTTAGTTCCGGTTCCAGCACAAAGACAT 60
|||||||||| | |||||||| |||||||||||| || || ||||| |||| |||||
Sbjct 21 ATGGAGAAAAAAGCAGAGAAGAGAAGGATAGTGTTGGTACCATTTCCATTACAAGGACAT 80
Query 61 GTAACTCCAATGATGCAGCTTGG-CACAGCCCTAAACATGAAGGGCTTCTCTATTACTGT 119
| |||||||||||||| ||||| || |||||| ||| |||| |||||||| || || ||
Sbjct 81 ATCACTCCAATGATGCAACTTGGTCA-AGCCCTTAACTTGAAAGGCTTCTCAATCACAGT 139
Query 120 TGTTGAAGGACAGTTCAAT-AAAGTAAGCTCATCTCAAAACTTTCCTGGTTTTCAATTTG 178
|| | |||| ||| |||| || ||||||| || || ||||||||||||||||||||
Sbjct 140 TGCTCTAGGAGAGTCCAATGGAA-TAAGCTCTTCGCAGCACTTTCCTGGTTTTCAATTTA 198
Query 179 TAACCATACCAGATACAGAGAGCTTGCCAGAGTCTGTGCTC-G--A--G-AG-ACTCGGA 231
| |||||||||| | | |||||||||| ||||||| || | | | || | |||||
Sbjct 199 TTACCATACCAG----A-A-AGCTTGCCAGTGTCTGTG-TCTGAAATGGAAGCATTCGGA 251
Query 232 CCGGTCGAGTTTTTATTCGAGATCAACAAAACCAGT-GAGGCAAGCTTCAAGGACTGTAT 290
|| ||||||||| | | || ||||||| |||| | ||||||||||||||||| |||||
Sbjct 252 CCAGTCGAGTTTCTGCTAAAGCTCAACAATACCA-TCGAGGCAAGCTTCAAGGAATGTAT 310
Query 291 AAGGCAGTCGTTGCTGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAGTATA- 349
||| |||| |||| | |||||||| ||||||||||||||||||||||||||||| | |
Sbjct 311 AAGTCAGTTGTTGATACAACAAGGTAATGATATAGCATGTATCATCTACGACGA-TCTTC 369
Query 350 TGTACTTCTGTGGAGCTGCAGCTAAGGAGTTCAACCTTCCTAGTGTAATATTCAGCAC-A 408
|||||||||||| ||||||||||||||||||||| |||| ||| | || |||||||| |
Sbjct 370 TGTACTTCTGTGAAGCTGCAGCTAAGGAGTTCAAGATTCCAAGTATCATCTTCAGCACTA 429
Query 409 CAAAGTGCTACTAATCAAGTTTCCCGTTGCGTTTTAAGAAAACTCAGTGCCGAGAAGTTC 468
||| |||||||| || |||||| | | || ||||| || ||||| | |||||||||||||
Sbjct 430 CAA-GTGCTACTCATAAAGTTTGCTGCTGTGTTTTGAGCAAACTTAATGCCGAGAAGTTC 488
Query 469 TTGGTGGACATGGAAGATCCTGAAGTGCAGGA-AACGTTGGTGGAAAATTTGCATCCATT 527
||| | |||||||||||| |||| |||| | || || | ||||||| ||||||||| |
Sbjct 489 TTGATCGACATGGAAGATACTGACTTGCAAAACAAGGTAG-TGGAAAACTTGCATCCAGT 547
Query 528 AAGATACAAAGACCTACCAACTTC-AGGAGTTGGGCCACTAGATCGATTATTTGA-GCTC 585
||| | |||||||||||||| || |||| |||||||| |||| |||| |||| ||||
Sbjct 548 AAGTTTCAAAGACCTACCAA-TTAGAGGATTTGGGCCATTAGAAAGATT-TTTGGTGCTC 605
Query 586 TGTAGGGAAATA-GTCAACAAAAGAACAGCTTCCGCTGTTATCATCAACACAGTGAGATG 644
|||||||||||| | |||||||||| | |||| | || |||||||||||| | ||| ||
Sbjct 606 TGTAGGGAAATAAG-CAACAAAAGATCGGCTTGTGGTGCTATCATCAACACGGCGAGCTG 664
Query 645 TCTAGAGAGCTCGTCTCTGAAAC-GTCTGCAACATGAACTCGGGATTCCGGTGTA-CGCA 702
| |||||||||||||||||| | | ||||||| ||| | || ||||| ||||| | ||
Sbjct 665 TTTAGAGAGCTCGTCTCTGACATTGA-TGCAACAAGAATTTGGAATTCCAGTGTATC-CA 722
Query 703 TTAGGCCCTCTTCACATTACAGTTTCAGCA-GCTTCTAGTTTACTGGAAGAGGACAGGAG 761
|| || |||||||||||||||| |||| || | | |||||||||| ||||| ||||||||
Sbjct 723 TTGGGTCCTCTTCACATTACAGCTTCAACAAGGT-CTAGTTTACTAGAAGAAGACAGGAG 781
Query 762 CTGCGTTGAATGGTTGAACAAGCAAAAACCGAGGTCAGTCGTTTACATAAGCTTGGGGAG 821
|||| ||||||||||||||| || ||||| ||||||||| | ||||||||| |||| ||
Sbjct 782 CTGCATTGAATGGTTGAACATTCAGAAACCAAGGTCAGTCATATACATAAGCATGGGAAG 841
Query 822 CGTAGTTCAAATGGAAACCAAAGAAGTGTTAG-AGATGGCTCGGGGTTTATTTAATAGCA 880
| || || ||||||||||||||||||| || | || ||||| || || | |||| |
Sbjct 842 CATATTTGAAATGGAAACCAAAGAAGT-TTCGGAGGTGGCTAATGGATTGGGTGATAGTA 900
Query 881 ACCAGCCTTTCTTATGGGTCATTCGGCCTGGCTCTATCGCAGGCTCCGAATGGATAGAGT 940
|||| |||||| |||||||||| || ||||| | | || || | | | | | |
Sbjct 901 ACCAACCTTTCCTATGGGTCATCCGACCTGG-T-T--CGAAG-C-C--A-T---T-G--- 944
Query 941 CACTGCCAGAGGAAGTCATTAAGATGGTCTCCGAAAGAGGGTATA-TTGTGAAATGGGCA 999
| | ||||||||||| |||||||||||| |||| ||| | | ||||||||||||||
Sbjct 945 C-C----AGAGGAAGTCAGTAAGATGGTCTCAGAAAAAGGAT-TCGTTGTGAAATGGGCA 998
Query 1000 CCACAGATAG-AAGTACTTG-GACATCCTGCAGTGGGAGGATTCTGGAGCCACTGTGGAT 1057
|| || | || ||||||||| | ||||||||||||||||| ||||||||||||||||| |
Sbjct 999 CCGCAAA-AGGAAGTACTTGCG-CATCCTGCAGTGGGAGGTTTCTGGAGCCACTGTGGTT 1056
Query 1058 GGAACTCAACGCTTGAAAGCATTGTGGAAGGAGTTCCAATGATATGCAGGCCCTT-TCAT 1116
||||||| || | || ||||||| |||||||||||||||||| |||||||| || | |
Sbjct 1057 GGAACTCCACAATGGAGAGCATTGCGGAAGGAGTTCCAATGATCTGCAGGCC-TTCTGAC 1115
Query 1117 GGCGAGCAAAAGTTAAACGCACTGTGTTTAGAGAGTATTTGGAGAATAGGGTTTCAGGTG 1176
|| ||||| |||||||||||| ||| | |||| ||| |||||||||||||| ||| | |
Sbjct 1116 GGTGAGCAGAAGTTAAACGCATTGTATATAGAAAGTGTTTGGAGAATAGGGATTCTGCTT 1175
Query 1177 CAAGGT-AAGGTAGAGAGGGGAGGGGTCGAGAGAGCTGTGAAGAGGTTGATAGTGGATGA 1235
|||| | ||| | || || |||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 1176 CAAGATGAAG-TGGAAAGAGGAGAGGTCGAGAGAGCTGTCAAGAGGTTGATCGTGGATGA 1234
Query 1236 AGAAGGTGCAG-ACATGAGAGAGAGAGCCCTTGTT-TTAAAAGAGAATCTCAAAGCCTCT 1293
|||||||||| | ||||| ||||||||||||||| ||||| ||||| ||||| ||||||
Sbjct 1235 TGAAGGTGCAGGA-ATGAGGGAGAGAGCCCTTGTTCTTAAA-GAGAAGCTCAATGCCTCT 1292
Query 1294 GTAAGAAATGGAGGCTCCTCATACAACGCATTGGAGGAGATCGTTAAC 1341
||||||| |||||||||||| || || ||||| | ||| |||| |||
Sbjct 1293 GTAAGAAGTGGAGGCTCCTCCTATAATTCATTGAATGAGCTCGTCAAC 1340
> Ahg897494 jgi|Araly1|897494|Al_scaffold_0005_1460
Length=1356
Score = 965 bits (522), Expect = 0.0
Identities = 1097/1364 (80%), Gaps = 82/1364 (6%)
Strand=Plus/Plus
Query 1 ATGGAGAAAATG-GAAGAGAAGAAAAGGATAGTGTTAGTTCCGGTTCCAGCACAAAGACA 59
|||||||||| | | |||||||||||| |||||||| ||||| ||||| |||| | ||
Sbjct 1 ATGGAGAAAA-GAGCAGAGAAGAAAAGAATAGTGTTGGTTCCACTTCCATTACAAGGGCA 59
Query 60 TGTAACTCCAATGATGCAGCTTGG-CACAGCCCTAAACAT-GAAGGGCTTCTCTATTACT 117
| | |||||||||||||| ||||| || |||||| ||| | ||| |||||||| || ||
Sbjct 60 TATCACTCCAATGATGCAACTTGGTCA-AGCCCTTAAC-TCGAAAGGCTTCTCAATAACA 117
Query 118 GTTGTTGAAGGACAGTTCAATAAAGTAAGCTCATCTC-AAA-ACTTTCCTGGTTTTCAAT 175
||| || |||| |||||||| ||||||||| | || ||| |||| ||||| |||||||
Sbjct 118 GTTTTTTTAGGAGAGTTCAATCGAGTAAGCTC-T-TCGAAACACTTCCCTGGATTTCAAT 175
Query 176 TTGTAACCATACCAGATACAGAGAGCTTGCCAGAGTCTG-TGCTCGAGAG-ACTCGGACC 233
|| | |||||||||| | | | ||| |||| | ||| | ||||| | | |||||||
Sbjct 176 TTATCACCATACCAG----A-A-ATCTTACCAGTGGCTGAAG-TCGAG-GCAATCGGACC 227
Query 234 GGTCGAGTTT-TTATTCGAGATCAACAAAACCAGTGAGGCAAGCTTCAAGGACTGTATAA 292
||||||||| | | | || | ||||||||||||||||||| ||||||||||||| |||
Sbjct 228 AGTCGAGTTTCTGA-TAAAGCTAAACAAAACCAGTGAGGCAAACTTCAAGGACTGTGTAA 286
Query 293 GGCAG-TCGTTGCTGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAGT-ATAT 350
| ||| | | || | |||||||| |||||||| |||||||||||||||||||| | |||
Sbjct 287 GTCAGAT-GCTGATACAACAAGGTAATGATATTGCATGTATCATCTACGACGA-TCTTAT 344
Query 351 GTACTTCTGTGGAGCTGCAGCTAAGGAGTTCAACCTTCCTAGTGTAATATTCAGCAC-AC 409
|||||||||||||||||||||||| |||||||| |||| ||| | || ||| |||| ||
Sbjct 345 GTACTTCTGTGGAGCTGCAGCTAATGAGTTCAAGATTCCAAGTATCATCTTCTGCACTAC 404
Query 410 AAAGTGCTACTA-ATCAAGTTTCCCGTTGCGTTTTAAGAAAACTCAGTGCCGAGAAGTTC 468
||||||||| | || |||||| | | ||||| || ||||| | |||||||||||||
Sbjct 405 -AAGTGCTAC-ACATAAAGTTTGCAACTATGTTTTGAGTAAACTTAATGCCGAGAAGTTC 462
Query 469 TTGGTGGACATGGAAGATCCTGAAGTGCAGGAAAC--GTTGGTGGAAAATTTGCATCCAT 526
||| | ||||||||||||||||| |||| |||| | | |||||||| |||||||||
Sbjct 463 TTGATCGACATGGAAGATCCTGACTTGCA--AAACAAGGTAGTGGAAAACTTGCATCCAG 520
Query 527 TAAGATACAAAGACCTACCAACTT-CAGGAGTTGGGCCACTAGATCGATTATTT-GAGCT 584
|||| | |||||||||||||| || |||| ||| ||||||||| |||| ||| | |||
Sbjct 521 TAAGTTTCAAAGACCTACCAA-TTGGAGGATTTGAGCCACTAGAGAGATT-TTTGGTGCT 578
Query 585 CTGTAGGGAAATAGTCAACAAAAGAACAGCTTCCGCTGTTATCATCAACACAGTGAGATG 644
||||||||||||| ||| ||||||| |||||| | || |||||||||||| ||||| ||
Sbjct 579 CTGTAGGGAAATAATCACCAAAAGATCAGCTTGTGGTGCTATCATCAACACGGTGAGCTG 638
Query 645 TCTAGAGAGCTCGTCTCTGA-AACGTCTGCAACATGAACTCGGGATTCCGGTGTA-CGCA 702
| |||||||||||||||||| | | |||||||| ||| | || ||||| ||||| | ||
Sbjct 639 TTTAGAGAGCTCGTCTCTGACATTG-CTGCAACAAGAATTTGGAATTCCAGTGTATC-CA 696
Query 703 TTAGGCCCTCTTCACATTACAGTTTCAGCAGCTTCTAGTTTACTGGAAGAGGACAGGAGC 762
|| || |||||||| ||||| | | || | | ||||||||||||||||| |||||||||
Sbjct 697 TTGGGTCCTCTTCATATTACTGCTAAAGAAACGTCTAGTTTACTGGAAGAAGACAGGAGC 756
Query 763 TGCGTTGAATGGTTGAACAAGCAAAAACCGAGGTCAGTCGTTTACATAAGCTTGGGGAGC 822
||| |||||||| |||||||||| ||||| ||||||||| | ||||||||| |||| |||
Sbjct 757 TGCATTGAATGGCTGAACAAGCAGAAACCAAGGTCAGTCATATACATAAGCATGGGAAGC 816
Query 823 GTAGTTCAAATGGAAACCAAAGAAGTGTTAGAGATGGCTCGGGGTTTATTTAATAGCAAC 882
|| || | || |||||||||||||| || || |||||| || || | | ||||||||
Sbjct 817 ATATTTGACATAGAAACCAAAGAAGTTTTGGAAATGGCTAATGGATTGTGTGATAGCAAC 876
Query 883 CAGCCTTTCTTATGGGTCATTCGGCCTGGCTCTATCGCAGGCTCCGAATGGATAGAGTCA 942
|| ||||||||||||||||| || ||||| | || || | || | |
Sbjct 877 CAACCTTTCTTATGGGTCATCCGACCTGG---T-TC-CAAG--CC----------A-T-- 916
Query 943 CTGCCAGAGGAAGTCATTAAGATGGTCTCCGAAAGAGGGTAT-ATTGTGAAATGGGCACC 1001
||||||||||||||| ||| |||||||| |||| ||| | | |||||||||||||||||
Sbjct 917 -TGCCAGAGGAAGTCAGTAAAATGGTCTCAGAAAAAGGAT-TCATTGTGAAATGGGCACC 974
Query 1002 ACAGATAGAAGTACTTGGACATCCTGCAGTGGGAGGATTCTGGAGCCACTGTGGATGGAA 1061
| | | || | | | ||||||||||||||||| |||||||||||||||||||||||
Sbjct 975 GC--A-A-AA-TGC---G-CATCCTGCAGTGGGAGGTTTCTGGAGCCACTGTGGATGGAA 1025
Query 1062 CTCAACGCTTGAAAGCATTGTGGAAGGAGTTCCAATGATATGCAGGCCCTTTCATGGCGA 1121
|||||| || || || |||| ||||||||||||||||| || ||||| ||| | || ||
Sbjct 1026 CTCAACACTGGAGAGTATTGCAGAAGGAGTTCCAATGATCTGTAGGCCTTTTAACGGTGA 1085
Query 1122 GCAAAAGTTAAACGCACTGTGTTTAGAGAGTATTTGGAGAATAGGGTTTCAGGTGCAAGG 1181
||| |||||||||||| ||| | |||| ||| |||||||||||||| ||| | | |||||
Sbjct 1086 GCAGAAGTTAAACGCATTGTATATAGAAAGTGTTTGGAGAATAGGGATTCTGCTTCAAGG 1145
Query 1182 T-AAGGTAGAGAGGGGAGGGGTCGAGAGAGCTGTGAAGAGGTTGAT-AGTGGATGAAGAA 1239
| ||| | || || ||||| ||||||||||||||||| |||||||| | ||||||| |||
Sbjct 1146 TGAAG-TGGAAAGAGGAGGTGTCGAGAGAGCTGTGAAAAGGTTGATCA-TGGATGAGGAA 1203
Query 1240 GGTGCA-GACATGAGAGAGAGAGCCCTTGTTTTAAAAGAGAA-TCTCAAAGCCTCTGTAA 1297
|||||| | |||||| ||||||||||||||| |||||||||| | |||| ||||||||
Sbjct 1204 GGTGCAAG-CATGAGGGAGAGAGCCCTTGTTCTAAAAGAGAAGT-TCAATTACTCTGTAA 1261
Query 1298 GAAATGGAGGCTCCTCATACAACGCATTGGAGGAGATCGTTAAC 1341
||| |||||||||||||||||| |||||| | ||| |||| |||
Sbjct 1262 GAAGTGGAGGCTCCTCATACAATGCATTGAATGAGCTCGTCAAC 1305
> Ahg485039 jgi|Araly1|485039|fgenesh2_kg.5__1031__AT3G46650.1
Length=1301
Score = 841 bits (455), Expect = 0.0
Identities = 726/855 (85%), Gaps = 26/855 (3%)
Strand=Plus/Plus
Query 485 ATCCTGAAGTGCAGGA-AACGTTGGTGGAAAATTTGCATCCATTAAGATACAAAGACCTA 543
|||||||| |||| || || | |||||||||||||| |||||||| ||||||||||||||
Sbjct 427 ATCCTGAAATGCAAGACAAAG-TGGTGGAAAATTTGTATCCATTACGATACAAAGACCTA 485
Query 544 CCAACTTCAGGAGTTGGGCCACTAGATCGA-TTATTTGAGCTCTGTAGGGAAATAGTCAA 602
|| | ||||| | | ||||||||||||||| || |||||||||||||| ||| ||| |||
Sbjct 486 CCTATTTCAGAAATGGGGCCACTAGATCGAGTT-TTTGAGCTCTGTAGAGAAGTAGGCAA 544
Query 603 CAAAAGAACAGCTTCCGCTGTTATCATCAACACAGTGAGATGTCTAGAGAGCTCGTCTCT 662
||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||| |
Sbjct 545 CAAAAGAACAGCTTCTGGTGTTATCATCAACACGGTGAGCTGTCTAGAGAGCTCGTCTTT 604
Query 663 GAAACGTCTGCAACATGAACTCGGGATTCCGGTGTAC-GCATTAGGCCCTCTTCACATTA 721
| | | |||||||| ||| || | ||||| |||| | ||||||||||||||||||| |
Sbjct 605 GTCATGGCTGCAACAAGAAGTCAGAATTCCAGTGT-CTCCATTAGGCCCTCTTCACATGA 663
Query 722 CAGTTTCAGCAGCTTCTAGTTTACTGGAAGAGGACAGGAGCTGCGTTGAATGGTTGAACA 781
||| |||| || ||||||||||||| |||||||||||||||||| |||||||| ||||||
Sbjct 664 CAGCTTCACCACCTTCTAGTTTACTTGAAGAGGACAGGAGCTGCATTGAATGGCTGAACA 723
Query 782 AGCAAAAACCGAGGTCAGTCGTTTACATAAGCTTGGGGAGC-GTAGTTCAAATGGAAACC 840
|||| ||||||||||||||| | || |||||| | ||| | | | |||||||||||||
Sbjct 724 AGCAGAAACCGAGGTCAGTCATATATATAAGCGT-AGGAACACTTGGTCAAATGGAAACC 782
Query 841 AAAGAAGTGTTAGAGATGGCTCGGGGTTTATTTAATAGCAACCAGCC-TTTCTTATGGGT 899
|| |||||||| ||||||||| |||| || | |||||||||||| || ||| ||||||||
Sbjct 783 AAGGAAGTGTTGGAGATGGCTTGGGGGTTGTGTAATAGCAACCAACCGTTT-TTATGGGT 841
Query 900 CATTCG-GCCTGGCTCTATCGC-AGGCTCCGAATGG-ATAGAGTCACTGCCAGAGGAAGT 956
|| || | | || || ||| | ||| || || ||||| ||| ||||||| ||| |
Sbjct 842 TATCCGAG-CGGGTTCCATC-CTTGGC-ATTAACGGTATAGATTCATTGCCAGATGAATT 898
Query 957 CATTAAGATGGTCTCCGAAAGAGGGTATATTGTGAAATGGGCACCACAGATAGAAGTACT 1016
|| |||||||||||| |||| ||| || ||||||||| ||||||| ||||||||||||||
Sbjct 899 CAATAAGATGGTCTCAGAAATAGGATACATTGTGAAACGGGCACCGCAGATAGAAGTACT 958
Query 1017 TGGACATCCTGCAGTGGGAGGATTCTGGAGCCACTGTGGATGGAACTCAACGCTTGAAAG 1076
|||||||||||||||||||| ||||||||||||||||||||||||||||| || || ||
Sbjct 959 AGGACATCCTGCAGTGGGAGGCTTCTGGAGCCACTGTGGATGGAACTCAACACTCGAGAG 1018
Query 1077 CATTGTG-GAAGGAGTTCCAATGATATGCAGGCCCTTTCATGGCGAGCAAAAGTTAAACG 1135
||||| | |||||||| |||||||| |||||||| |||||||| ||||||||||| ||||
Sbjct 1019 CATTG-GAGAAGGAGTGCCAATGATTTGCAGGCCTTTTCATGGGGAGCAAAAGTTGAACG 1077
Query 1136 CACTGTGT-TT-AGAGAGTATTTGGAGAATAGGGTTTCAGGTGCAAGGTAAGGTAGAGAG 1193
|| ||| | || | ||||| || |||||||||||||||||||| ||||||| || || ||
Sbjct 1078 CAATGTATATTGAAAGAGT-TT-GGAGAATAGGGTTTCAGGTGGAAGGTAAAGTGGATAG 1135
Query 1194 GGGAGGGGTCGAGAGAGCTGTGAAGAGGTTGATAGTGGATGAAGAAGGTGCAGACATG-A 1252
|||| || |||| |||||||||||||||||| ||||||||||||||||| | ||| |
Sbjct 1136 AGGAGAAGTTGAGAAAGCTGTGAAGAGGTTGATCGTGGATGAAGAAGGTGCGGGGATGCA 1195
Query 1253 GAGAGAGAGCCCTTGTTTTAAAAGAGAATCTCAAAGCCTCTGT-AAGAAATGGAGGCTCC 1311
| ||||||||||||||| |||||||||| |||||||||||||| || |||||||||| ||
Sbjct 1196 G-GAGAGAGCCCTTGTTCTAAAAGAGAAGCTCAAAGCCTCTGTCAA-AAATGGAGGCGCC 1253
Query 1312 TCATACAACGCATTG 1326
|||||| ||||||||
Sbjct 1254 TCATACGACGCATTG 1268
Score = 431 bits (233), Expect = 7e-120
Identities = 372/436 (85%), Gaps = 21/436 (5%)
Strand=Plus/Plus
Query 5 AGAAAATGGAAGAGAAGAAAAGGATAGTGTTAGTTCCGGTTCCAGCACAAAGACATGTAA 64
|||||||||||| |||| |||||||||||||||||| |||||||||||| | ||||| |
Sbjct 1 AGAAAATGGAAGCCAAGAGAAGGATAGTGTTAGTTCCAGTTCCAGCACAAGGTCATGTTA 60
Query 65 CTCCAATGATGCAGCTTGGCACAGCCCTAAACAT-GAAGGGCTTCTCTATTACTGTTGTT 123
||||||||||||| ||||| | |||||| || | | |||||||||| ||||| ||||||
Sbjct 61 CTCCAATGATGCAACTTGGGAAAGCCCTTTAC-TCGGAGGGCTTCTCAATTACAGTTGTT 119
Query 124 GAAGGACAGTTCAATAAAGTAAG--C-TCATCTCAAAACTTTCCTGGTTTTCAATTTGTA 180
|| ||||| |||||| ||||||| | || |||||| |||| ||||||||||| |||||
Sbjct 120 GAGGGACACTTCAATCAAGTAAGCTCTTCTTCTCAACACTTCCCTGGTTTTCAGTTTGTC 179
Query 181 ACCATACCAGATACAGAGAGCTTGCCAGAGTCTGTGCTCGAGAGACTCGGACCGG--TCG 238
||||| | | | ||| ||||| |||||||||| |||||||||||||| || |||
Sbjct 180 ACCAT---A-A-A-AGAAAGCTTACCAGAGTCTGAATTCGAGAGACTCGGA--GGAATCG 231
Query 239 AGTTT-TTATTCGAGATCAACAAAACCAGTGAGGCAAGCTTCAAGGACTGTATAAGGCAG 297
||||| | | | || |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 232 AGTTTATGA-TAAAGCTCAACAAAACCAGTGAGGCAAGCTTCAAGGACTGTATAAGTCAG 290
Query 298 TCGTTGCTGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAGTAT-ATGTACTT 356
| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 291 TTGTTGCAGCAACAAGGCAATGATATAGCATGTATCATCTACGACGAGT-TCATGTACTT 349
Query 357 CTGTGGAGCTGCAGCTAAGGAGTTCAACCTTCCTAGTGTAATATTCAGCAC-ACAAAGTG 415
|||||| ||||||||||| |||||||| ||||| ||||| || |||| ||| |||| |||
Sbjct 350 CTGTGGTGCTGCAGCTAAAGAGTTCAAACTTCCCAGTGTCATCTTCAACACTACAA-GTG 408
Query 416 CTACTAATCAAGTTTC 431
|||| |||||||||||
Sbjct 409 CTACAAATCAAGTTTC 424
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50512865025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5