BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G46740.1 Length=2795 Score E Sequences producing significant alignments: (Bits) Value Ahg937391 jgi|Araly1|937391|scaffold_501582.1 4132 0.0 Ahg917668 jgi|Araly1|917668|Al_scaffold_0008_2419 1435 0.0 > Ahg937391 jgi|Araly1|937391|scaffold_501582.1 Length=2495 Score = 4132 bits (2237), Expect = 0.0 Identities = 2410/2494 (97%), Gaps = 9/2494 (0%) Strand=Plus/Plus Query 28 AAACCTTATCTTCTCCGCCCATGGCCGCCTTCTCCGTCAACGGGCAGCTTATCCCGACGG 87 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2 AAACCTTATCTTCTCCGCCCATGGCCGCCTTCTCCGTCAACGGGCAGCTTATCCCGACGG 61 Query 88 CAAC-AAGCTCCACTGCTTCCAcctctctctcttcccgtcggaaatttctctctccttcc 146 |||| || |||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 62 CAACTAA-CTCCACCGCTTCCACCTCTCTCTCTTCCCGTCGGAAATTTCTATCTCCTTCC 120 Query 147 tcgtctcgtctccctcgcatctccactcaatctcctcgTGTCCCATCGATAAAATGCAGC 206 |||||||| ||||||||||||||| | | ||||||||| || |||||||||||||||||| Sbjct 121 TCGTCTCGCCTCCCTCGCATCTCCTCACCATCTCCTCGCGTTCCATCGATAAAATGCAGC 180 Query 207 AAAAGCTTACCTAACCGAGATACAGAGACTTCCTCAAAGGATTCTCTCCTTAAAAACCTA 266 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AGTAGCTTACCTAACCGAGATACAGAGACTTCCTCAAAGGATTCTCTCCTTAAAAACCTA 240 Query 267 GCTAAACCTCTAGCCGTAGCCTCAGTCTCCTCCGCTGCTTCATTCTTTCTGTTCCGAATC 326 ||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct 241 GCTAAACCTCTAGCCGTAGCCTCAGTCTCGTCCGCTGCGTCATTCTTTCTATTCCGAATC 300 Query 327 TCGAATCTTCCGTCGGTTCTGACCggtggtggaggaggagga-gatgg-gaatttcggtg 384 |||||||||||||||||||| |||||||||||||| |||||| || || | | | || | Sbjct 301 TCGAATCTTCCGTCGGTTCTAACCGGTGGTGGAGGTGGAGGAGGA-GGAGGAGAT-GG-G 357 Query 385 gatttggtggtggaggtggtggtggagatggaaatgatggtggattttggGGGAAATTGT 444 |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 AATTT--CGGTGGATTTGGTGGTGGAGATGGAAATGATGGTGGATTTTGGGGGAAATTGT 415 Query 445 TTTCTCCTTCACCAGCGGTTGCTGATGAAGAACAATCACCGGATTGGGATTCTCATGGTT 504 |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 TTTCTCCTTCGCCGGCGGTTGCTGATGAAGAACAATCACCGGATTGGGATTCTCATGGTT 475 Query 505 TACCGGCGAATATCGTTGTGCAATTGAACAAGCTTAGTGGTTTCAAGAAGTATAAGGTAT 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 476 TACCGGCGAATATCGTTGTGCAATTGAACAAGCTTAGTGGTTTCAAGAAGTATAAGGTAT 535 Query 565 CTGATATTATGTTCTTTGATCGACGGAGACAAACCACTATTGGTACTGAAGATTCCTTCT 624 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 536 CTGACATTATGTTCTTTGATCGACGGAGACAAACCACAATTGGTACTGAAGATTCCTTCT 595 Query 625 TCGAGATGGTCTCGATTCGTCCTGGTGGAGTTTACACTAAAGCTCAATTGCAGAAGGAGC 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 596 TCGAGATGGTCTCGATTCGTCCTGGTGGAGTTTACACTAAAGCTCAATTGCAGAAGGAGC 655 Query 685 TTGAAACCCTAGCTACTTGTGGAATGTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAAC 744 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 656 TTGAAACCCTAGCTACTTGTGGAATGTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAAC 715 Query 745 CTGATGGAACCCTAGGTGTTACAATCTCGTTTGCTGAGAGTACATGGCAATCTGCTGATA 804 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 716 CTGATGGAACCCTAGGTGTTACAATCTCCTTTGCTGAGAGTACATGGCAATCTGCTGATA 775 Query 805 GGTTTAGATGTATTAACGTTGGGTTAATGGTACAGTCGAAACCTATTGAGATGGATTCAG 864 ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 776 GGTTTAGATGTATCAACGTTGGGTTAATGGTGCAGTCGAAACCCATTGAGATGGATTCAG 835 Query 865 ATATGACTGATAAAGAGAAGCTTGAGTATTACAGGAGTTTGGAGAAGGATTACAAGAGGA 924 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 836 ATATGACTGATAAAGAGAAGCTTGAGTATTACAGGAGCTTGGAGAAGGATTACAAGAGGA 895 Query 925 GAATTGATAGGGCACGGCCTTGTTTGTTGCCTGCACCTGTGTATGGTGAGGTTATGCAGA 984 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 896 GAATTGATAGGGCACGGCCTTGTTTGTTGCCTGCTCCTGTATATGGTGAGGTTATGCAGA 955 Query 985 TGTTGAGGGATCAAGGGAAAGTGAGTGCTAGGCTGTTGCAGAGGATTAGGGACCGTGTTC 1044 |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct 956 TGTTGAGGGACCAAGGGAAAGTGAGTGCAAGGCTTTTGCAGAGGATTAGGGACCGTGTTC 1015 Query 1045 AGAAATGGTATCATGATGAAGGGTATGCTTGTGCTCAAGTTGTGAATTTTGGGAATTTGA 1104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1016 AGAAATGGTATCATGATGAAGGGTATGCTTGTGCTCAAGTTGTGAATTTTGGGAATTTGA 1075 Query 1105 ATACTAAGGAGGTTGTTTGTGAAGTTGTGGAAGGTGATATAACTCAGCTAGTTATTCAGT 1164 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1076 ATACTAAGGAGGTTGTTTGTGAAGTTGTGGAAGGTGATATAACTCAGCTGGTTATTCAGT 1135 Query 1165 TTCAAGATAAGCTTGGTAATGTGGTTGAAGGAAATACTCAAGTTCCTGTGGTGCGCAGGG 1224 |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||| Sbjct 1136 TTCAAGATAAGCTTGGTAATGTAGTTGAAGGTAACACTCAAGTTCCTGTGGTGCGCAGGG 1195 Query 1225 AATTGCCTAAGCAGCTTCGCCAAGGCTATGTTTTCAACATTGAAGCTGGGAAAAAAGCTC 1284 |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1196 AATTGCCTAAACAGCTTCGCCAAGGCTATGTTTTCAACATTGAAGCTGGGAAACAAGCTC 1255 Query 1285 TCAGTAACATCAATTCATTGGGGCTGTTCTCTAACATTGAAGTCAATCCACGCCCAGATG 1344 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 TCAGGAACATCAATTCATTGGGGCTGTTCTCTAACATTGAAGTCAATCCACGCCCAGATG 1315 Query 1345 AGAAAAATGAAGGGGGCATTATTGTTGAGATCAAGCTTAAGGAGCTAGAACAGAAGTCAG 1404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1316 AGAAAAATGAAGGGGGCATTATTGTTGAGATCAAGCTTAAGGAGCTAGAACAGAAGTCAG 1375 Query 1405 CTGAAGTCAGTACAGAATGGAGTATTGTTCCTGGGCGTGGAGGAGCTCCCACATTGGCTT 1464 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1376 CTGAAGTCAGTACAGAATGGAGTATTGTTCCTGGGCGTGGAGGAGCTCCCACACTGGCTT 1435 Query 1465 CATTCCAGCCAGGTGGTTCTGTTACTTTCGAGCATCGAAACCTCCAGGGTCTTAATAGGT 1524 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1436 CATTCCAGCCAGGTGGGTCTGTTACTTTCGAGCATCGAAACCTCCAGGGTCTTAATAGGT 1495 Query 1525 CTCTCATGGGTTCAGTGACCACTAGCAACTTCTTGAATCCTCAGGATGATCTTTCGTTTA 1584 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 1496 CTCTCATGGGTTCAGTGACCACCAGCAACTTCTTGAATCCTCAGGATGATCTTTCATTTA 1555 Query 1585 AGCTTGAGTATGTGCACCCGTATCTGGATGGTGTTTACAATCCTCGGAACCGAACATTCA 1644 ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| Sbjct 1556 AGCTTGAGTATGTGCACCCGTATCTGGATGGTGTTTACAATCCTCGGAATCGCACATTCA 1615 Query 1645 AAACAAGCTGCTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCTGGTGTTG 1704 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1616 AAACAAGCTGCTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCCGGTGTTG 1675 Query 1705 AGGAAGTGCCACCAATTTGGGTTGACCGAGCTGGTGTGAAAGCTAATATAACTGAGAACT 1764 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 1676 AGGAAGTGCCACCAATTTGGGTTGATCGAGCTGGTGTGAAAGCTAACATAACTGAGAACT 1735 Query 1765 TCACCCGTCAGAGTAAGTTTACATATGGACTTGTGATGGAGGAGATAACAACCCGAGATG 1824 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 1736 TCACCCGTCAGAGTAAGTTTACTTATGGACTTGTGATGGAGGAGATAACAACCCGTGATG 1795 Query 1825 AAAGCAGTCACATTGCTGCAAATGGTCAGAGACTACTACCTAGCGGTGGAATCAGTGCTG 1884 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1796 AAAGCAGTCACATTGCTGCAAATGGTCAGAGACTACTACCTAGCGGTGGAATCAGTGCTG 1855 Query 1885 ATGGACCTCCAACAACTCTCAGTGGTACCGGTGTCGATCGAATGGCTTTTCTACAAGCCA 1944 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 1856 ATGGACCTCCAACAACTCTCAGTGGTACCGGTATTGATCGAATGGCTTTTCTACAAGCCA 1915 Query 1945 ACATCACCCGTGACAATACCAAATTTGTTAATGGGGCAGTTGTTGGACAGAGGACTGTCT 2004 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1916 ACATCACCCGTGACACTACCAAATTTGTTAATGGGGCAGTTGTTGGACAGAGGACTGTCT 1975 Query 2005 TTCAGGTTGATCAGGGATTGGGTATTGGGAGCAAATTCCCGTTCTTCAACCGCCACCAGT 2064 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1976 TTCAGGTGGATCAGGGACTGGGTATTGGGAGCAAATTCCCGTTCTTCAACCGCCACCAGT 2035 Query 2065 TAACCATGACAAAATTCATTCAGTTGCGGGAAGTAGAACAAGGGGCTGGTAAGTCACCAC 2124 |||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 2036 TAACCATGACAAGATTCATTCAGCTGCGGGAAGTAGAAGAAGGGGCTGGTAAGTCACCAC 2095 Query 2125 CACCAGTTCTAGTCCTCCATGGGCATTACGGAGGCTGCGTTGGCGACCTTCCAAGCTACG 2184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2096 CACCAGTTCTAGTCCTCCATGGGCATTACGGAGGCTGCGTTGGCGACCTTCCAAGCTACG 2155 Query 2185 ATGCTTTTGTCCTCGGTGGTCCGTACTCTGTCCGTGGCTACAACATGGGAGAGCTCGGTG 2244 ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 2156 ATGCTTTTGTCCTTGGTGGTCCGTACTCTGTCCGTGGCTACAATATGGGTGAGCTCGGTG 2215 Query 2245 CTGCTAGAAACATTGCCGAGGTCGGTGCTGAGATCAGAATACCCGTGAAGAACACACATG 2304 |||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||| Sbjct 2216 CTGCTAGAAACATTGCCGAGGTGGGTGCTGAGATCAGAATACCTGTGAAGAACACGCATG 2275 Query 2305 TCTACGCTTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAAGGATGTGAAGGGAAACC 2364 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2276 TCTACGCCTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAAGGACGTGAAGGGAAACC 2335 Query 2365 CTACAGCAGTGTACAGGAGAACGGGTCAGGGTTCATCCTATGGTGCAGGTGTGAAACTCG 2424 |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 2336 CTACAGCAGTCTACAGGAGAACGGGGCAGGGTTCATCCTACGGTGCAGGTGTGAAACTCG 2395 Query 2425 GTTTGGTCCGAGCTGAGTATGCTGTAGATCACAACAATGGAACCGGTGCTCTGTTCTTCC 2484 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2396 GTTTGGTCCGAGCTGAGTATGCTATAGATCACAACAATGGAACCGGTGCTCTGTTCTTCC 2455 Query 2485 GATTTGGAGAGAGGTATTAAGGTAATGTGAGAAG 2518 | |||||||||||||||||||||||||||||||| Sbjct 2456 GGTTTGGAGAGAGGTATTAAGGTAATGTGAGAAG 2489 > Ahg917668 jgi|Araly1|917668|Al_scaffold_0008_2419 Length=2538 Score = 1435 bits (777), Expect = 0.0 Identities = 1701/2139 (80%), Gaps = 96/2139 (4%) Strand=Plus/Plus Query 420 gatggtggattttggGGGAAATTGTTTTCTCCT-TC---ACCAGCGG-T-T-GCTGATGA 472 ||||| ||||||||| |||||||||||||| || | ||||| || | | || || || Sbjct 442 GATGGCGGATTTTGGAGGAAATTGTTTTCT-CTGGCAGTACCAGTGGCTGTCGCCGACGA 500 Query 473 AGAACAATCACCGGATTGGGATTCTCATGGTTTACCGGCGAATATCGTTGTGCAATTGAA 532 |||||| |||||||||||||||||||| |||||||||||||| || ||||| || ||||| Sbjct 501 AGAACAGTCACCGGATTGGGATTCTCACGGTTTACCGGCGAACATTGTTGTACAGTTGAA 560 Query 533 CAAGCTTAGTGGTTTCAAGAAGTATAAGGTATCTGATATTATGTTCTTTGATCGACGGAG 592 |||||| |||||||| || |||||||| | || ||||||||||||||||||||||| || Sbjct 561 CAAGCTAAGTGGTTTGAAAAAGTATAAAATCTCAGATATTATGTTCTTTGATCGACGAAG 620 Query 593 ACAAA-CCACTATTGGTACTGAAGATTCCTTCTTCGAGATGGTCTCGATTCGTCCTGGTG 651 | ||| |||| ||| || || ||||| |||||||||||||| ||||||| || | Sbjct 621 A-AAAGCCACCGTTGAAACAGATGATTCTTTCTTCGAGATGGTGTCGATTCAAGAAGGAG 679 Query 652 GAGTTTACACTAAAGCTCAATTGCAGAAGGAGCTT-GAAACCCTAGCTACTTGTGGAAT- 709 |||||||||| |||||||| || ||||||||| || ||||||||| ||||||| || || Sbjct 680 GAGTTTACACAAAAGCTCAGTTACAGAAGGAG-TTAGAAACCCTAACTACTTGCGG-ATG 737 Query 710 GTTTGAGAAAGTTGATTTGGAAGGGAAAACGAAACCTGATGGAACCCTAGGTGTTACAAT 769 |||||||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||| Sbjct 738 GTTTGAGAAAGTCGATTTCGAAGGGAAGACGAAGCCTGACGGAACCCTAGGTGTTACAAT 797 Query 770 CTCGTTT-GCTGAGAGTACATGGCAA-TCTGCTGATAGGTTTAGATGTATTAACGTTGGG 827 ||| ||| || ||||| | |||||| | || || || ||| |||| || ||||| ||| Sbjct 798 CTC-TTTCGCAGAGAGCATGTGGCAAGGC-GCGGAGAGATTTCGATGCATCAACGTAGGG 855 Query 828 TTAATGGTACAGTCGAAACCTATTGAGATGGATTCAGATATGACTGATAAAGAGAAGCTT 887 |||||| ||| | |||||| | |||| |||||||| ||||| || ||||||| | || Sbjct 856 TTAATGACACAACCAAAACCTGTAAAGATTGATTCAGACATGACAGAAAAAGAGATGATT 915 Query 888 GAGTA-TTACAGGAGTTTGGAGAAGGATTACAAG-AGGAGAATTGATAGGGC-ACGGCCT 944 ||||| || || ||| |||||||| || ||| | ||| ||| | | ||| | |||| Sbjct 916 GAGTACTT-GAGAAGTCAAGAGAAGGAATATAAGCA-GAGGATTAAGAAGGCGA-GGCCG 972 Query 945 TGTTTG-TTGCCTGCACCTG-TGT-ATGGTGAGGTTATGCAGATGTTGAGGGATCAAGGG 1001 |||||| || || | | | | | | | | |||| |||| ||| | ||||||||| || Sbjct 973 TGTTTGCTT-CCGGGATC-GAT-TCAACGAGAGGCGATGCTTATGCTAAGGGATCAAAGG 1029 Query 1002 AAAGTGAGTGCTAGGCTGTTGCA-GAGGATTAGGGACCGTGTTCAGAAATGGTATCATGA 1060 | | ||||| ||||| ||||| ||| ||| ||| || |||| || ||||| || || Sbjct 1030 AGTTTAAGTGCGAGGCTTTTGCATAAGG-TTAAGGAACGAGTTCTTAAGTGGTACCAAGA 1088 Query 1061 TGAAGGGTAT-GCTTGTGCTCAA-GTTGTGAATTTTGGGAATTTGAATACTAAGGAGGTT 1118 |||||||| | || |||| || ||||||||||||||||| ||||| | |||||| || Sbjct 1089 CCAAGGGTATAG-TTATGCT-AATGTTGTGAATTTTGGGAACTTGAACAGTAAGGAACTT 1146 Query 1119 GTTTGTGAAGTTGTGGAAGGTGATATAACTCAGCTAGTTATTCAGTTTCAAGATAAGCTT 1178 |||| ||||||| ||||||| || ||||| ||| | |||||||||||||||||||||||| Sbjct 1147 GTTTTTGAAGTTATGGAAGGAGACATAACACAGTTGGTTATTCAGTTTCAAGATAAGCTT 1206 Query 1179 GGTAATGTGGTTGAAGGAAATACTCAAG-TTCCTGTGGTGCGCAG-GGAATTGCCTAAGC 1236 |||||||| |||||||| || || | || ||||||| |||||||| |||| || || | Sbjct 1207 GGTAATGTAGTTGAAGGTAACACAC-AGATTCCTGTCGTGCGCAGACAAATT-CCAAAAC 1264 Query 1237 AGCTT-CG-CCAAGGCT-ATGTTTTCAACATTG-AAGCTGGGAAAAAAGCTCTCAGTAAC 1292 || || || || ||| | |||| |||||| || ||| || ||| ||||| | || ||| Sbjct 1265 AG-TTACGTCC-AGG-TCATGTGCTCAACA-TGAAAGTTGCGAACGAAGCTGTGAGGAAC 1320 Query 1293 A-TCAATTCATTGGGGCTGTTCTCTAACATTGAAG-TCAAT-CCACG-CCCAGATGAGAA 1348 | || |||| || || ||||||||||||| | || | || ||| | ||||||||||| Sbjct 1321 ATTC-ATTCTTTAGGATTGTTCTCTAACATCG-AGAT-TATGCCA-GTACCAGATGAGAA 1376 Query 1349 AAATGAAGGGGGCATTATTGTTGAGATCAAGCTT-AAGGA-GCTAGAACAGAAGTCAGCT 1406 ||| ||||| || | ||||||||| |||||||| || || || ||| ||||| || | | Sbjct 1377 AAAGGAAGGAGGTGTAATTGTTGAGGTCAAGCTTCAA-GAGGC-AGATCAGAAATCTG-T 1433 Query 1407 -GAAGTCAGTACAGAATGGAGTATTGTTCCTGGGCGTGGAGGAGCTCCCACATTGGCTTC 1465 || |||||| |||| |||||||||||||| || | ||||||| ||| || |||| || Sbjct 1434 AGACGTCAGTGCAGATTGGAGTATTGTTCCAGGTCCTGGAGGATATCCTTCACTGGCGTC 1493 Query 1466 ATTCCAGCCAGGTGGTTCTGTTACTTTCGAGCATCGAAACCTCCAGGGTCTTAATAGGTC 1525 ||||||||| | || ||||| ||||||| ||||||||| || ||||||||||| | || Sbjct 1494 GTTCCAGCCAAGCGGGACTGTTTCTTTCGAACATCGAAACATCAAGGGTCTTAATCGATC 1553 Query 1526 TCTCATGGGTTCAGTGACCACTAGCAACTTCTTGAATCCT---CAGGATGATCTTTCGTT 1582 |||||| |||||||| |||||||| ||||||||||||||| ||||||||||||||||| Sbjct 1554 TCTCATTGGTTCAGTAACCACTAGTAACTTCTTGAATCCTGAGCAGGATGATCTTTCGTT 1613 Query 1583 TAAGCTTGAGTATGTGCACCCGTATCTGGATGGTGTTTACAATCCTCGGAACCGAACATT 1642 ||||||||||||||| ||||| ||||| || |||||| |||||||| | ||||| || || Sbjct 1614 TAAGCTTGAGTATGTACACCCATATCTAGACGGTGTTAACAATCCTAGAAACCGTACCTT 1673 Query 1643 CAAAACAAGC-TGCTTCAACAGCCGCAAACTTAGCCCAGTATTCACTGGAGGACCTGG-T 1700 |||||| || | ||||||||| | |||||||||||||| ||||||||||| ||||| | Sbjct 1674 CAAAACGAGTAT-CTTCAACAGTAGTAAACTTAGCCCAGTGTTCACTGGAGGCCCTGGAT 1732 Query 1701 GTTGAGGAAG---TGCCACCAAT-TTGGGTTGACCGAGCTGGTGTGAAAGCTAATATAAC 1756 ||||||||| || | ||||| |||| | || ||||||||||||||||||| |||||| Sbjct 1733 -TTGAGGAAGCAGTGGCTCCAATCTTGG-TGGATCGAGCTGGTGTGAAAGCTACTATAAC 1790 Query 1757 TGAGAACTTCACCCGTCAGAGTAAGTTTACATATGGACTTGTGATGGAGGAGATAACAAC 1816 |||| ||||||| ||||||||||| || ||||||||| ||||| |||| ||||||||||| Sbjct 1791 TGAGGACTTCACACGTCAGAGTAAATTAACATATGGAGTTGTGTTGGAAGAGATAACAAC 1850 Query 1817 CCGAGATGAAAGCAGTCACAT-TGCTGCAAATGGTCAGAGACT-ACTACCTAGCGGTGGA 1874 ||||||||| | | | || | || ||||||||||| | | | |||||| || ||| Sbjct 1851 TAGAGATGAAAACGGGAAAATCT-CTTCAAATGGTCAG-GTTTTATTACCTAATGGAGGA 1908 Query 1875 ATCAGTGCTGATGGACCTCCAACAACTCTCAGTGGTACCGGTGTCGATCGAATGGCTTTT 1934 |||| || | |||||||||||||||||||||||||||| ||| | ||||| | || ||| Sbjct 1909 ATCAATGTTAATGGACCTCCAACAACTCTCAGTGGTACTGGTATTGATCGTGTAGCCTTT 1968 Query 1935 CTACAAGCCAACATCACCCGTGACAATACCAAATTTGTTAATGGGGC-AGTTGTTGGACA 1993 ||||||| || || |||| ||||| ||||| ||||| |||| || | |||| ||| | Sbjct 1969 CTACAAGGTAATATAACCCAAGACAACACCAAGTTTGTGAATGTAGCTA-TTGTCGGAGA 2027 Query 1994 GAGGACTG-TCTTTCAGGTTGATCAGGGATTGGGTATTGGGAGCAAATTCCCGT-TCTTC 2051 |||| | |||||||||| ||||| || || ||||| || ||||| ||||| ||||| Sbjct 2028 TAGGAA-GATCTTTCAGGTGGATCAAGGCTTAGGTATAGGAAGCAA-TTCCCCACTCTTC 2085 Query 2052 AACCGCCACCAGTTAACCATGACAAAATTCATTC-AGTTGCGGGAAGTAGAACAAGGGGC 2110 |||||||| || |||| | |||||||| |||| | | | | |||||||| |||| | Sbjct 2086 AACCGCCATCAACTAACTTTAACAAAATTTATTCCACT-GAGACAAGTAGAAGAAGGTCC 2144 Query 2111 TGGTAAGTCACCACCACCAGTTCTAGTCCTCCATGGGCATTACGGAGGCTGCGTTGGCGA 2170 ||||| | | ||||||||||||||| |||||||| ||||||| || || || || || Sbjct 2145 CGGTAAACCGCAACCACCAGTTCTAGTTCTCCATGGCCATTACGCTGGATGTGTAGGTGA 2204 Query 2171 CCTTCCAAGCTACGATGCTTTTG-TCCTCGGTGGTCCGTA-CTCTGTCCGTGGCTACAAC 2228 || || | || |||||||||| || | || ||||| || |||||| || || |||| | Sbjct 2205 TCTACCTGGATATGATGCTTTTGCTCTT-GGAGGTCC-TAACTCTGTTCGAGGTTACA-C 2261 Query 2229 -ATGGGAGAGCTCGGTGCTGCTAGAAACATTGCCGAGGTCGGTGCTGAGATCAGAATACC 2287 | ||||||||||||||| ||||||||||||| |||||| ||||||||| | ||| |||| Sbjct 2262 TAAGGGAGAGCTCGGTGCAGCTAGAAACATTGTCGAGGTTGGTGCTGAGGTTAGAGTACC 2321 Query 2288 CGTGAAGAACACACATGTCTACGCTTTTGTTGAGCATGGAAATGATTTAGGAAGCTCAAA 2347 | ||||||||||| || || || |||| |||||||||||| ||||| ||||||||||| Sbjct 2322 TATAAAGAACACACAAGTGTATGCATTTGCTGAGCATGGAAACGATTTGGGAAGCTCAAA 2381 Query 2348 GGATGTGAAGGGAAACCCTACAGCAG-TGTACAGGAGAACGGGTCAGGGTTCATCCTATG 2406 ||||||||| ||||| || || || | | | ||| |||| ||| || |||||||| |||| Sbjct 2382 GGATGTGAAAGGAAATCCGACCGCGGCTTT-CAGAAGAAAGGGACATGGTTCATCTTATG 2440 Query 2407 GTGCAGGTGTGAAACTCGGTTTGGTCCGAGCTGAGTATGCTGTAGATCACAACAATGGAA 2466 ||| ||||||||||| ||| | | |||||||| |||||||| |||||||| ||||| Sbjct 2441 GTGTGGGTGTGAAACTTGGTCAGATACGAGCTGAATATGCTGTTGATCACAATTGTGGAA 2500 Query 2467 CCGGTGCTCTGT-TCTTCCGATTTGGAGAGAGGTATTAA 2504 |||||||||||| ||||| | || ||||| || |||||| Sbjct 2501 CCGGTGCTCTGTCTCTTCAG-TTCGGAGAAAGATATTAA 2538 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 105471888405 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5