BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G46990.1
Length=2081
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485078 jgi|Araly1|485078|fgenesh2_kg.5__1070__AT3G46990.1 2420 0.0
Ahg497283 jgi|Araly1|497283|fgenesh2_kg.139__1__AT5G58930.1 619 2e-176
Ahg496016 jgi|Araly1|496016|fgenesh2_kg.8__1832__AT5G58930.1 603 2e-171
Ahg485079 jgi|Araly1|485079|fgenesh2_kg.5__1071__AT3G47000.1 165 1e-39
> Ahg485078 jgi|Araly1|485078|fgenesh2_kg.5__1070__AT3G46990.1
Length=1916
Score = 2420 bits (1310), Expect = 0.0
Identities = 1667/1831 (91%), Gaps = 57/1831 (3%)
Strand=Plus/Plus
Query 70 AAAAATACTGAACAAATAGAAAATTGAAGAAA-GGGTTT----AAGTGAAATTTCCATAA 124
||||||| | |||||||||||||||||| ||| |||||| ||||||||||| |||||
Sbjct 1 AAAAATATTTAACAAATAGAAAATTGAAAAAATGGGTTTAAGGAAGTGAAATTTTCATAA 60
Query 125 TTGACCCTACAAACAACACTTACACT---ATCATCAAGACACTCTCACA--CACACTCTC 179
||||||||||||||||||| ||||| |||||| | ||||||||||| | | |||||
Sbjct 61 CTGACCCTACAAACAACACTAACACTCCGATCATC-A-ACACTCTCACACTCTCTCTCTC 118
Query 180 TCTTAAGTCACCGCCGCACGCAAGCAAATCAAACGAA-C--TATTCGTCAGCCATGGCTA 236
|||||||||||||||||||||||||||||| |||||| | ||||| ||||||||| |||
Sbjct 119 TCTTAAGTCACCGCCGCACGCAAGCAAATC-AACGAACCATTATTCTTCAGCCATGACTA 177
Query 237 ACGTCAAACAAACCAATCGCCGTCGTTCCTCCTCCTCATGCCACCGTCACCCTTCCGCTA 296
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 178 ACGTCAAACAAACCAATCGCCGTCGTTCTTCCTCCTTATGCCACCGTCACCCTTCCGCTA 237
Query 297 AACCAACCAGCGGTTTCTGCGCTTCCTGTCTTCGTGAACGTCTCGTAACAATAGAAGCTC 356
||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||
Sbjct 238 AACCAACCAGCGGTTTCTGCGCTTCCTGTCTCCGTGAACGTCTCGTCACTATAGAAGCTC 297
Query 357 AGTCTTCTTCTCTCGCCGCCGTTCAGACTCCCGAGCTCCGTCGTATTCGATCATACTCCG 416
||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 298 AGTCTCCTTCTCCCGCCGCCGTTCAGACTCCTGAGCTCCGTCGTATTCGATCATACTCCG 357
Query 417 TTCGTAACGCATCAGTCTCCGTTTCGGA-TCAGCCGCGACGGAGATCATGTGACGTTAGG 475
|||| ||||||||||||||||||| | ||||||||||||||||| ||||||| ||||
Sbjct 358 TTCGCAACGCATCAGTCTCCGTTT-TAACGCAGCCGCGACGGAGATCGTGTGACGCTAGG 416
Query 476 TCAAGCGCAAGCTCTCTCCTGGACTTGTTTGTCGATGATGACGAAGAACGGGTGGATAGT 535
||||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||||||
Sbjct 417 TCAAGCGCAAGCTGTCTCCAGGACTTGTTTGTCGATGATGACGAAGAACGGTTAGATAGT 476
Query 536 TCGATTCGAAAGCCTCTGGTTCCAGATTTAAaagaggaggaagaagaggaagaagaagaa 595
|||||||| ||| |||||||||| ||||| ||| | ||||||||||||
Sbjct 477 TCGATTCGGAAGTCTCTGGTTCCGGATTT-------------GAA-A-GAAGAAGAAGAA 521
Query 596 gaagaTTACTACGATGGAGAAGATATAAAAGGTTTTGATGAAGGCA-A--GCCGAGGAAG 652
||||||||| |||||||||||||||| |||||||||||| ||| | | | ||| |||
Sbjct 522 GAAGATTACAACGATGGAGAAGATATCAAAGGTTTTGAT--AGGAAGATTGTCGAAGAA- 578
Query 653 ATCGTCGAAGAGAACAAGACGATGAAGGAGTTCATAGATCTAGATTGGAGAAACCAGATT 712
| | || |||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 579 AAAGGCGTAGAGAACAAGACGATGAAGGAGTTCATAGATCTAGATTGGGGAAACCAAATT 638
Query 713 AAGAAGAACAATGGCAAAGATTTGAAGGAAATAGCATCGGTTTTGAGCAGGAGATTGAAG 772
|||||||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||
Sbjct 639 AAGAAGAACAATGGCAAAGATTTGAAGGTAGTAGTATCGGTTTTGAGTAGGAGATTGAAG 698
Query 773 AATTTTACATTGAATAAGAGAAATGACGAAAAATCAGATTCCAGATTCGCCGGAATTGTG 832
||||||||| |||||||||||| |||||||||||| ||||| ||||||||||||| ||||
Sbjct 699 AATTTTACACTGAATAAGAGAATTGACGAAAAATCGGATTCTAGATTCGCCGGAAATGTG 758
Query 833 AATGGTCGTCACTCTTCTGATGTGGATCCTAGATTGTCTTTTGATGGAGGTAGGATCTCG 892
|||||||||| ||| | |||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 759 AATGGTCGTCGCTCATGTGATGTAGATCCTAGATTGTCTCTTGATGGAGGTAGGATCTCG 818
Query 893 TTTGAGAAACCTAGGTCTTCATGGGATGGTTGCTTGATTGAAAAATCATATCACAAGCTT 952
||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||
Sbjct 819 TTTGAGAAACCTAGGGCTTCGTGGGATGGTTGCTTGATTGAAAAATCATATCATAAGCTA 878
Query 953 ACGACATTGTCTACTGTGACGGAAGATGCTAAAGCTAAATGTGGTGTTgaagaagaagaa 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 ACGACATTGTCTACTGTGACGGAAGATGCTAAAGCTAAATGTGGTGTTGAAGAAGAAGAA 938
Query 1013 gtag-ag--g-a--gaaggagaagagTCCAGGTGGGACGGTTCAAACGAAGAACTATTAC 1066
| || || | | | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 GAAGAAGAAGAAGGGGAGGAGAAGAGTCCAGGTGGGACGGTTCAAACGAAGAACTATTAC 998
Query 1067 TCGGATTCTCGTCGGAGAAGGAGTTTTGATCGGTCGGTTTCGATTAAGAGACAAGGATTG 1126
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 999 TCGGATTCTCGTCGGAGAAGGAGTTTTGATCGATCGGTTTCGATTAAGAGACAAGGATTG 1058
Query 1127 CTTGAGGTTGATGAATTGAGAGGTATATCGAATGCAAAGGTATCACCTGAAACTGTAGGT 1186
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 1059 CTTGAGGTTGATGAATTGAGAGGTATATCGAATGCTAAGGTATCACCTGAAACTGTTGGT 1118
Query 1187 TTGTTTCATGGTGCTAAGTTATTGGTTACAGAGAAGGAACTTAGGGATTCGAATTGGTAT 1246
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1119 TTGTTTCATGGTGCTAAGTTATTAGTTACAGAGAAGGAACTTAGGGATTCGAATTGGTAT 1178
Query 1247 TCGAT-TAAAAATGTCAAACCAGAGAGTAAAGAATTAGTTTCTAAAGGAAAGATTTGTAT 1305
||| | ||||||||| ||| ||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1179 TCG-TCTAAAAATGTTAAATCAGAGAGCAAAAAATTAGTTTCTAAAGGAAAGATTTGTAT 1237
Query 1306 TGCTGCTGGTGGTGAGGGGAAGAAGCAGGATAGTGTTGAGTTAAAGAAACCTAGAAAGAA 1365
||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1238 TGCTGCTGGTG---AGGGGAAGAAGCAGGATAGTGTGGAGTTAAAGAAACCTAGGAAGAA 1294
Query 1366 ATGGCCAAAGGGATGGAACATTTGGGGATTGATACAGAGGAAAAACGAGGCGAAGAACGA 1425
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1295 ATGGCCAAAGGGGTGGAACATTTGGGGATTGATACAGAGGAAAAGCGAGGCGAAGAACGA 1354
Query 1426 GATAAAGACTGAGCAAATTTTGAAACTTGAAGGAAATGCGGTTGAGGGTTCTTTGGCTGA 1485
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1355 GATAAAAACTGAGCAAAGTTTGAAACTTGAAGGAAATGCGGTTGAGGGTTCTTTGGCTGA 1414
Query 1486 ATCTCTGTTAAAGCTTAGGAGAGTAGGTAAAGGAGAAACCAATGTTGGTGTTAGTGAGAA 1545
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct 1415 GTCTCTGTTAAAGCTTAGGAGAGTAGGTAAAGGAGAAACCAATGGTGGTGTTAGTGAAAA 1474
Query 1546 GCTTTTGAAAAGCTATAGTGTAAGTGCGAGAAAGTCTTGCGATGGCGTGCGTAGTGGTGC 1605
|||||||||||||||||||||||| ||||||||||| |||||||| |||| |||| ||||
Sbjct 1475 GCTTTTGAAAAGCTATAGTGTAAGAGCGAGAAAGTCATGCGATGGTGTGCTTAGTAGTGC 1534
Query 1606 TAACATTGTCAGTGGCTTTGAAGGTGGAAGAAGCTCTTGTGATGGTCTGTTTCATGGATC 1665
| | | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 1535 TGCCGTAGTCAGTGGCTTTGAAGGAGGAAGAAGTTCTTGTGATGGTCTGTTTCATGGATC 1594
Query 1666 TATTAACAGTGTTGAGGCTGGAAGAAACTCTTGTGATGGATTGGTTAATGGCATTGA-AG 1724
||||||||||||||||| |||||||| ||| ||||| |||||||||||||| ||||| ||
Sbjct 1595 TATTAACAGTGTTGAGGTTGGAAGAAGCTCGTGTGACGGATTGGTTAATGGTATTGAGAG 1654
Query 1725 GCAAACAAAATCATCATCTTCTCCAGAGAAACGCAAATGTTGGTACGTGCAGCCA-AGAA 1783
||||| |||||||| | | ||||||||||||||||||||||||||| || ||| ||||
Sbjct 1655 -CAAACGAAATCATC-T-T-CTCCAGAGAAACGCAAATGTTGGTACGGGC-GCCCGAGAA 1709
Query 1784 AACCTTGAGAAGAGTATGTTTAGATTCTATCTGAGTCCGGTAAAGAGCCATAAGACTAGC 1843
|||||||| || ||| |||||||||||||| ||| ||||| || ||||||||||||||||
Sbjct 1710 AACCTTGATAACAGTTTGTTTAGATTCTATTTGACTCCGGCAAGGAGCCATAAGACTAGC 1769
Query 1844 AAATCCGGGAAGAGTAGGCTGAAGAATTAGT 1874
||||| ||||| |||||||||||||||||||
Sbjct 1770 AAATCAGGGAAAAGTAGGCTGAAGAATTAGT 1800
Score = 182 bits (98), Expect = 1e-44
Identities = 113/120 (94%), Gaps = 2/120 (2%)
Strand=Plus/Plus
Query 1963 AGTCCGTATATCACATCAACACCAATGTTTGTTTTCCTTCTCATATATTTTCCTCATAAA 2022
|||||||||| |||||||| |||||| |||| |||||||||||||| |||||||||||||
Sbjct 1798 AGTCCGTATACCACATCAAAACCAATATTTGGTTTCCTTCTCATATCTTTTCCTCATAAA 1857
Query 2023 AGCACATCAACAATACATTGTTTT-TGCATGGTTTGCTTATACAAATACGACATTGCGTG 2081
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1858 AGCACATCAACAATACATTGTTTTCT-CATGGTTTGCTTATACAAATACGACATTGCGTG 1916
> Ahg497283 jgi|Araly1|497283|fgenesh2_kg.139__1__AT5G58930.1
Length=2070
Score = 619 bits (335), Expect = 2e-176
Identities = 843/1076 (78%), Gaps = 84/1076 (8%)
Strand=Plus/Plus
Query 839 CGTCACTCTTCTGATGTGGATCCTAGATTGTCTTTTGATGGAGGTAGGATCTCGTTTGAG 898
|||| ||| | ||||||||||||||| |||||| | || | | || | |||||||| |||
Sbjct 869 CGTCGCTCATGTGATGTGGATCCTAGGTTGTCTCTCGACGCAAGTCGAATCTCGTTCGAG 928
Query 899 AAACCTAG-GTCTTCATGGGATGGTTGCTTGATT-GAAAAATCATAT-CACAAGCTTACG 955
| ||||| | ||||||||||||| || |||||| |||| | ||||| || ||||| |
Sbjct 929 GAGCCTAGAG-CTTCATGGGATGGATGTTTGATTGGAAAGA-CATATCCA-AAGCTGATT 985
Query 956 ACATTGT-CTACTGTGACGGAAGATGCTAAAG-CT------A-AATG-T-GGTGTTgaag 1004
| |||| || ||||||| ||||||| ||||| || | || | | | || ||
Sbjct 986 CCTTTGTCCT-CTGTGACTGAAGATGTTAAAGCCTCGCCGGAGAA-GATAACCGGTG-AG 1042
Query 1005 -aagaagaagtagaggagaaggagaagagTCCAGGTGGGACGGTTCAAACGAAGAACTAT 1063
||||||| | ||||||| | |||| | ||||||||||| | |||||||| | | ||
Sbjct 1043 AAAGAAGACGAAGAGGAG-A--AGAACAACCCAGGTGGGACAGCTCAAACGAGGGATTAC 1099
Query 1064 TACTCGGATTCTCGTCGGAGAAGGAGTTTTGATCGGTCGGTTTCGATTAAGAGACAAGGA 1123
|||| |||||| || ||||| || || | ||| || | || | | |||||| |||
Sbjct 1100 TACTTGGATTCACGGCGGAGGAGAAG--CT--TCGATC-G-ATC-A-T-CGAGACATGGA 1150
Query 1124 TTGCTTGAGGTTGATGAATTGAGAGGTATATCGAATGCAAAGGTATCACCTGAAACTGTA 1183
|||||||| ||||||||||||| || ||| |||||||| ||||||||||||||||||||
Sbjct 1151 TTGCTTGAAGTTGATGAATTGAAAGCTATTTCGAATGCTAAGGTATCACCTGAAACTGTT 1210
Query 1184 GGTTTGTTTCATGGTGCTAAGTT-ATTGGTTACAGAGAAGGAACTTAGGGATTCGAATTG 1242
|||||||||||||| || ||||| || ||||| |||| |||||||||||||||||||||
Sbjct 1211 GGTTTGTTTCATGGAGCGAAGTTGCTT-GTTACGGAGAGGGAACTTAGGGATTCGAATTG 1269
Query 1243 GTATTCGATTAAAAATGT-CAAACCAGAGAG-TAAAGAATTAGTTTCTAAAGGAAAGATT 1300
|||||| ||||||||| | |||||| ||||| | || |||| ||||||| | | ||
Sbjct 1270 GTATTCAATTAAAAAT-TACAAACCGGAGAGCT-TGGAGTTAGGTTCTAAA-G-TTG-TT 1324
Query 1301 TGTAT-TGCTGCTGGTGGTGAGGGGAAGAAGCAGGATAGTGTTGAGTTAAAGAA-ACCTA 1358
|| | || ||||| |||||||| ||||||||| ||| || ||| ||| ||||| | |
Sbjct 1325 GGT-TGTGTTGCTGCTGGTGAGGTGAAGAAGCAAGATGGTTTTGGGTTGAAGAAGA-GTG 1382
Query 1359 GAAAGAAAT-GGCCAAAGGGATGGAACATTTGGGGATTGATACAGAGGAAAAACGA---G 1414
| ||||||| || ||| ||||||||| ||||||||||||| |||||||||| ||| |
Sbjct 1383 GGAAGAAATGGGGTAAA-GGATGGAACTTTTGGGGATTGATTCAGAGGAAAACCGATGTG 1441
Query 1415 GCGAAGAACGAGAT-AAAGACTGAGCAAATTTTGAAACTTGAAGGAAATGCGGTTGAGGG 1473
|| |||||||| || ||| || ||||||| ||||||||||| ||||||||| | |||||
Sbjct 1442 GCCAAGAACGACATCAAA-ACCGAGCAAAGTTTGAAACTTGGAGGAAATGCAATGGAGGG 1500
Query 1474 TTCTTTGGCTGAATCTCTGTTAAAGCTTAGGAGAGTAGG-TAAAGGAGAAACCAATGTTG 1532
|||| | ||||| |||||||| ||||||||||| || || |||||| |||||||||| ||
Sbjct 1501 TTCTCTAGCTGAGTCTCTGTTGAAGCTTAGGAGGGT-GGCTAAAGGGGAAACCAATGGTG 1559
Query 1533 GTGTTAGTGAGAAGCTTTTGAA-AAGCTATAGTGTAAGTGCGAGAAAGTCTTGCGATGGC 1591
|||||| ||||| || || || |||||| || || |||||||||||||| ||||||||
Sbjct 1560 ATGTTAGCGAGAAACTCTT-AAGAAGCTACAGCGTTAGTGCGAGAAAGTCCTGCGATGGT 1618
Query 1592 GTGCGTA-GTGGTGCTAAC-ATTGTCAGTGGCTTTGAAGGTGGAAGAAGCTCTTGTGATG 1649
|| || |||||||| | ||||| | ||| ||||||||||||||||||||||||||||
Sbjct 1619 ATG-TTACGTGGTGCT-TCTATTGTTAATGGATTTGAAGGTGGAAGAAGCTCTTGTGATG 1676
Query 1650 GTCTGTTTCATGGATCTATTAACAG-TGTTGAGGCTGGAAGAA-A--CTCTTGTGATG-- 1703
||||||||||||| ||||||| | | ||||||| | ||||||| | ||| ||||| |
Sbjct 1677 GTCTGTTTCATGGCTCTATTA-CTGGTGTTGAGACCGGAAGAAGAAGCTCGTGTGAAGAC 1735
Query 1704 G-ATTGGTTAATGGCATTGAAGGCAAACAAAATCATCATCTTCTCCAGAGAAACG-CAAA 1761
| |||| || ||||| |||||||||||| ||||||| ||||| ||||| | | |||
Sbjct 1736 GGATTGTTTCATGGCGTTGAAGGCAAACGGAATCATCTTCTTC---AGAGAGATGACAAG 1792
Query 1762 TGTTGGTACGTGCA-GCCAAGAAAACCTTGAGAAGA-G-TATGTTTAGATTCTATCT-GA 1817
|||| || | | ||| || ||||| |||| | | |||| |||||||||| || ||
Sbjct 1793 C-TTGGGACTTACTCGCCG-GACAACCTC-AGAA-ATGGTATGGTTAGATTCTA-CTTGA 1847
Query 1818 -GTCCGGTAAAGAGCCATAAGACTAGCAAATCCGGGAAGAGTAGGCTGAAGAATTA 1872
| || |||| ||||||| ||| ||||| ||||| || | |||||||| ||||||
Sbjct 1848 CG-CCATTAAAAAGCCATACGACAAGCAACTCCGGTAAAACTAGGCTGATGAATTA 1902
> Ahg496016 jgi|Araly1|496016|fgenesh2_kg.8__1832__AT5G58930.1
Length=2058
Score = 603 bits (326), Expect = 2e-171
Identities = 840/1076 (78%), Gaps = 84/1076 (8%)
Strand=Plus/Plus
Query 839 CGTCACTCTTCTGATGTGGATCCTAGATTGTCTTTTGATGGAGGTAGGATCTCGTTTGAG 898
|||| ||| | ||||||||||||||| |||||| | || | | || | |||||||| |||
Sbjct 857 CGTCGCTCATGTGATGTGGATCCTAGGTTGTCTCTCGACGCAAGTCGAATCTCGTTCGAG 916
Query 899 AAACCTAG-GTCTTCATGGGATGGTTGCTTGATT-GAAAAATCATAT-CACAAGCTTACG 955
| ||||| | ||||||||||||| || |||||| |||| | ||||| || ||||| |
Sbjct 917 GAGCCTAGAG-CTTCATGGGATGGATGTTTGATTGGAAAGA-CATATCCA-AAGCTGATT 973
Query 956 ACATTGT-CTACTGTGACGGAAGATGCTAAAG-CT------A-AATG-T-GGTGTTgaag 1004
| |||| || ||||||| ||||||| ||||| || | || | | | || ||
Sbjct 974 CCTTTGTCCT-CTGTGACTGAAGATGTTAAAGCCTCGCCGGAGAA-GATAACCGGTG-AG 1030
Query 1005 -aagaagaagtagaggagaaggagaagagTCCAGGTGGGACGGTTCAAACGAAGAACTAT 1063
||||||| | ||||||| | |||| | ||||||||||| | |||||||| | | ||
Sbjct 1031 AAAGAAGACGAAGAGGAG-A--AGAACAACCCAGGTGGGACAGCTCAAACGAGGGATTAC 1087
Query 1064 TACTCGGATTCTCGTCGGAGAAGGAGTTTTGATCGGTCGGTTTCGATTAAGAGACAAGGA 1123
|||| |||||| || ||||| || || | ||| || | || | | |||||| |||
Sbjct 1088 TACTTGGATTCACGGCGGAGGAGAAG--CT--TCGATC-G-ATC-A-T-CGAGACATGGA 1138
Query 1124 TTGCTTGAGGTTGATGAATTGAGAGGTATATCGAATGCAAAGGTATCACCTGAAACTGTA 1183
|||||||| ||||||||||||| || ||| |||||||| ||||||||||||||||||||
Sbjct 1139 TTGCTTGAAGTTGATGAATTGAAAGCTATTTCGAATGCTAAGGTATCACCTGAAACTGTT 1198
Query 1184 GGTTTGTTTCATGGTGCTAAGTT-ATTGGTTACAGAGAAGGAACTTAGGGATTCGAATTG 1242
|||||||||||||| || ||||| || ||||| |||| |||||||||||||||||||||
Sbjct 1199 GGTTTGTTTCATGGAGCGAAGTTGCTT-GTTACGGAGAGGGAACTTAGGGATTCGAATTG 1257
Query 1243 GTATTCGATTAAAAATGT-CAAACCAGAGAG-TAAAGAATTAGTTTCTAAAGGAAAGATT 1300
|||||| ||||||||| | |||||| ||||| | || |||| ||||||| | | ||
Sbjct 1258 GTATTCAATTAAAAAT-TACAAACCGGAGAGCT-TGGAGTTAGGTTCTAAA-G-TTG-TT 1312
Query 1301 TGTAT-TGCTGCTGGTGGTGAGGGGAAGAAGCAGGATAGTGTTGAGTTAAAGAA-ACCTA 1358
|| | || ||||| |||||||| ||||||||| ||| || ||| ||| ||||| | |
Sbjct 1313 GGT-TGTGTTGCTGCTGGTGAGGTGAAGAAGCAAGATGGTTTTGGGTTGAAGAAGA-GTG 1370
Query 1359 GAAAGAAAT-GGCCAAAGGGATGGAACATTTGGGGATTGATACAGAGGAAAAACGA---G 1414
| ||||||| || ||| ||||||||| ||||||||||||| |||||||||| ||| |
Sbjct 1371 GGAAGAAATGGGGTAAA-GGATGGAACTTTTGGGGATTGATTCAGAGGAAAACCGATGTG 1429
Query 1415 GCGAAGAACGAGAT-AAAGACTGAGCAAATTTTGAAACTTGAAGGAAATGCGGTTGAGGG 1473
|| |||||||| || ||| || ||||||| ||||||||||| ||||||||| | |||||
Sbjct 1430 GCCAAGAACGACATCAAA-ACCGAGCAAAGTTTGAAACTTGGAGGAAATGCAATGGAGGG 1488
Query 1474 TTCTTTGGCTGAATCTCTGTTAAAGCTTAGGAGAGTAGG-TAAAGGAGAAACCAATGTTG 1532
|||| | ||||| |||||||| ||||||||||| || || |||||| |||||||||| ||
Sbjct 1489 TTCTCTAGCTGAGTCTCTGTTGAAGCTTAGGAGGGT-GGCTAAAGGGGAAACCAATGGTG 1547
Query 1533 GTGTTAGTGAGAAGCTTTTGAA-AAGCTATAGTGTAAGTGCGAGAAAGTCTTGCGATGGC 1591
|||||| || || || || || |||||| || || |||||||||||||| ||||||||
Sbjct 1548 ATGTTAGCGATAAACTCTT-AAGAAGCTACAGCGTTAGTGCGAGAAAGTCCTGCGATGGT 1606
Query 1592 GTGCGTA-GTGGTGCTAAC-ATTGTCAGTGGCTTTGAAGGTGGAAGAAGCTCTTGTGATG 1649
|| || |||||||| | ||||| | ||| ||||||||||||||||||||||||||||
Sbjct 1607 ATG-TTACGTGGTGCT-TCTATTGTTAATGGATTTGAAGGTGGAAGAAGCTCTTGTGATG 1664
Query 1650 GTCTGTTTCATGGATCTATTAACAG-TGTTGAGGCTGGAAGAA-A--CTCTTGTGATG-- 1703
||||||||||||| ||||||| | | | ||||| | ||||||| | ||| ||||| |
Sbjct 1665 GTCTGTTTCATGGCTCTATTA-CTGGTATTGAGACCGGAAGAAGAAGCTCGTGTGAAGAC 1723
Query 1704 G-ATTGGTTAATGGCATTGAAGGCAAACAAAATCATCATCTTCTCCAGAGAAACG-CAAA 1761
| |||| || ||||| |||||||||||| ||||||| ||||| |||| | | |||
Sbjct 1724 GGATTGTTTCATGGCGTTGAAGGCAAACGGAATCATCTTCTTC---AGAGTGATGACAAG 1780
Query 1762 TGTTGGTACGTGCA-GCCAAGAAAACCTTGAGAAGA-G-TATGTTTAGATTCTATCT-GA 1817
|||| || | | ||| || ||||| |||| | | |||| |||||||||| || ||
Sbjct 1781 C-TTGGGACTTACTCGCCG-GACAACCTC-AGAA-ATGGTATGGTTAGATTCTA-CTTGA 1835
Query 1818 -GTCCGGTAAAGAGCCATAAGACTAGCAAATCCGGGAAGAGTAGGCTGAAGAATTA 1872
| || |||| ||||||| ||| ||||| ||||| || | |||||||| ||||||
Sbjct 1836 CG-CCATTAAAAAGCCATACGACAAGCAACTCCGGTAAAACTAGGCTGATGAATTA 1890
> Ahg485079 jgi|Araly1|485079|fgenesh2_kg.5__1071__AT3G47000.1
Length=2011
Score = 165 bits (89), Expect = 1e-39
Identities = 102/108 (94%), Gaps = 2/108 (2%)
Strand=Plus/Minus
Query 1975 ACATCAACACCAATGTTTGTTTTCCTTCTCATATATTTTCCTCATAAAAGCACATCAACA 2034
||||||| |||||| |||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 2011 ACATCAAAACCAATATTTGGTTTCCTTCTCATATCTTTTCCTCATAAAAGCACATCAACA 1952
Query 2035 ATACATTGTTTT-TGCATGGTTTGCTTATACAAATACGACATTGCGTG 2081
|||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1951 ATACATTGTTTTCT-CATGGTTTGCTTATACAAATACGACATTGCGTG 1905
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78275453475
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5