BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G47010.1 Length=1952 Score E Sequences producing significant alignments: (Bits) Value Ahg323329 jgi|Araly1|323329|fgenesh1_pm.C_scaffold_5000873 2636 0.0 Ahg485079 jgi|Araly1|485079|fgenesh2_kg.5__1071__AT3G47000.1 1832 0.0 Ahg485082 jgi|Araly1|485082|fgenesh2_kg.5__1074__AT3G47050.1 1596 0.0 Ahg485080 jgi|Araly1|485080|fgenesh2_kg.5__1072__AT3G47040.1 970 0.0 > Ahg323329 jgi|Araly1|323329|fgenesh1_pm.C_scaffold_5000873 Length=1821 Score = 2636 bits (1427), Expect = 0.0 Identities = 1701/1833 (93%), Gaps = 19/1833 (1%) Strand=Plus/Plus Query 14 ATGGCAGAGACTGAGGAGTCTTCATGGGTTTACAAGAACCGAGACGCGCCGGTGGAGGCG 73 ||| |||||||||| || |||||||| |||||||||||| |||||||||| ||||||||| Sbjct 1 ATGCCAGAGACTGATGATTCTTCATGCGTTTACAAGAACGGAGACGCGCCAGTGGAGGCG 60 Query 74 CGTGTGAAGGACCTTCTCTCTCGCATGACTTTGCCGGAGAAGATTGGTCAGATGACTCAG 133 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CGTGTAAAGGACCTTCTCTCTCGCATGACTTTGCCGGAGAAGATTGGTCAGATGACTCAG 120 Query 134 ATAGAACGCTCCGTCGCTTCTCCTCAAGTCATTACTA-ATTCTTTCATCGGCAGTGTACA 192 ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 121 ATAGAACGCTCCGTCGCTTCTCCTCAAGTCATTAC-ACATTCTTTCATCGGCAGTGTACA 179 Query 193 GAGCGGCGCCGGAAGTTGGCCGTTGGAGGATGCTAAGTCGTCGGATTGGGCTGATATGAT 252 |||||||||||||||||||||||| ||| | || || || ||||||||||| |||||||| Sbjct 180 GAGCGGCGCCGGAAGTTGGCCGTTCGAGAACGCCAAATCATCGGATTGGGCGGATATGAT 239 Query 253 CGACGGTTTTCAGCGTTCAGCGTTAGCGTCGCGTTTGGGAATTCCAATAATCTACGGCAC 312 |||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 240 CGACAGTTTTCAGCGTTCAGCGTTAGCGTCGCGTTTGGGAATTCCGATAATATACGGCAC 299 Query 313 TGACGCCGTTCACGGCAACAATAACGTCTACGGCGCCACCGTCTTCCCCCACAACATTGG 372 |||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||| Sbjct 300 TGACGCCGTTCATGGCAACAACAACGTCTACGGTGCCACTGTCTTCCCCCACAACATTGG 359 Query 373 ACTCGGCGCCACCAGAGACGCAGATTTGGTCAAAAGAATTGGTGCTGCAACAGCACTTGA 432 ||||| || ||||||||||| ||||| || | ||||||||||||||||||||||||||| Sbjct 360 TCTCGGAGCTACCAGAGACGCCGATTTAGTTAGAAGAATTGGTGCTGCAACAGCACTTGA 419 Query 433 AATAAGGGCTAGTGGCGTTCACTGGACGTTTGCTCCTTGTGTGGCCGTTTTGGGAGATCC 492 | ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 420 AGTAAGGGCTAGTGGTGTTCACTGGACATTTGCTCCTTGTGTGGCTGTTTTGGGAGATCC 479 Query 493 GAGGTGGGGACGATGCTATGAAAGTTATAGTGAAGCTGCTAAAATTGTATGTGAGATGAG 552 |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| Sbjct 480 AAGGTGGGGACGATGCTATGAGAGTTATGGTGAAGCTGCTAAAATTGTTTGTGAGATGAG 539 Query 553 TTTGCTTATCTCGGGCCTACAAGGCGAGCCACCTGAAGAACACCCTTACGGTTACCCTTT 612 || |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 540 TTCGCTTATCTCGGGCCTACAAGGCGAGCCACCCGAAGAACACCCTAACGGTTACCCTTT 599 Query 613 TCTTGCAGGAAGAAACAACGTGATCGCGTGTGCTAAACACTTTGTTGGAGATGGTGGTAC 672 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 600 TCTTGCAGGAAGAAACAACGTGGTCGCGTGTGCTAAACACTTTGTTGGAGATGGTGGTAC 659 Query 673 TGAGAAAGGCTTAAGCGAAGGGAACACTATAACATCATATGAAGACTTGGAGAAAATACA 732 || || ||||||||||| |||||||| ||| ||||||||||||||||||||||||| || Sbjct 660 CGATAAGGGCTTAAGCGAGGGGAACACCATAGCATCATATGAAGACTTGGAGAAAATTCA 719 Query 733 TGTTGCTCCCTATCTTAATTGTATTGCTCAGGGAGTGTCG-ACCGTTATGGCCTCATTTT 791 |||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||| Sbjct 720 TGTTGCTCCCTATCTTAATTGTATTGCTCAGGGAGTGT-GTACCGTTATGGCCTCTTTTT 778 Query 792 CCAGTTGGAATGGAAGTAGACTCCACTCCGACTATTTCCTTTTGACTGAAGTTCTTAAAC 851 |||||||||| | ||||||||||||||||||||||||||| ||||| |||||||| || | Sbjct 779 CCAGTTGGAACGAAAGTAGACTCCACTCCGACTATTTCCTCTTGACGGAAGTTCTCAAGC 838 Query 852 AGAAACTCGGTTTCAAGGGATTTCTAGTTTCAGACTGGGATGGTTTGGAGACGATAAGCG 911 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 839 AGAAACTCGGTTTTAAGGGATTTCTAGTTTCAGACTGGGATGGTTTGGAGACGATTAGCG 898 Query 912 AGCCAGAAGGTTCCAACTACCGTAACTGCGTCAAACTCGGGATTAATGCTGGAATCGACA 971 ||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 899 AGCCAGAAGGTTCAAACTACCGTAACTGCATCAAACTCGGGATTAATGCTGGGATCGACA 958 Query 972 TGGTGATGGTGCCTTTCAAGTACGAACAGTTCATACAGGACATGACAGAT-TTGGTGGAG 1030 |||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 959 TGGTGATGGTACCTTTCAAGTACGAACAGTTCATACAGGACATGACAGATCTTG-TGGAG 1017 Query 1031 TCAGGGGAAATACCAATGGCTCGGGTCAATGATGCTGTTGAAAGAATACTAAGAGTGAAG 1090 ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 1018 TCAGGAGAAATACCGATGGCTCGGGTCAATGATGCTGTTGAGAGAATACTTAGAGTGAAG 1077 Query 1091 TTTGTTGCTGGTCTCTTTGAACATCCTCT-TGCGGACCGATCTTTGTTGGGAACTGTTGG 1149 |||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct 1078 TTTGTTGCGGGTCTCTTTGAACATCCTTTCT-CGGACCGATCTTTGTTGGGAACTGTTGG 1136 Query 1150 CTGCAAGGAACATAGAGAAGTGGCACGTGAAGCGGTTAGAAAGTCATTAGTGTTGCTGAA 1209 ||||||| | ||| || |||||||||||||||||||||| ||||| ||||| || Sbjct 1137 CTGCAAG-A-----GAGTAG---CACGTGAAGCGGTTAGAAAGTCGTTAGTTTTGCTTAA 1187 Query 1210 GAATGGTAAAAATGCTGATACACCATTTCTACCACTAGACCGCAATGCCAAGAGGATTCT 1269 |||||||||||||||| ||||||||||||| ||||||||||| ||||| ||||||||||| Sbjct 1188 GAATGGTAAAAATGCTAATACACCATTTCTGCCACTAGACCGTAATGCAAAGAGGATTCT 1247 Query 1270 AGTGGTTGGAATGCATGCAAACGATCTTGGAAATCAGTGTGGAGGATGGACAAAGATAAA 1329 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1248 AGTTGTTGGAATGCATGCAAACGATCTTGGAAATCAGTGTGGAGGATGGACAAAGACAAA 1307 Query 1330 ATCCGGTCAAAGCGGCAGAATCACAATTGGCACGACGCTTTTGGATTCAATAAAAGCAGC 1389 ||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1308 ATCTGGTCAAAGCGGCAGAATCACAATTGGCACGACGCTTTTGGATGCCATAAAAGCAGC 1367 Query 1390 AGTTGGAGACAAAACTGAAGTCATCTTCGAGAAAACTCCAACAAAGGAAACCTTAGCATC 1449 ||||||||||||||| ||||| |||| |||||||||||||||||| ||||||||||| || Sbjct 1368 AGTTGGAGACAAAACCGAAGTGATCTACGAGAAAACTCCAACAAAAGAAACCTTAGCCTC 1427 Query 1450 AAGTGATGGCTTCTCATACGCCATTGTTGCAGTGGGGGAACCTCCATACGCAGAAATGAA 1509 ||||| |||||||| ||||| || |||||||||||||| ||||| |||||||| ||||| Sbjct 1428 GAGTGAAGGCTTCTCCTACGCTATCGTTGCAGTGGGGGAGCCTCCCTACGCAGAGATGAA 1487 Query 1510 GGGAGATAACTCGGAACTCACTATACCTTTCAATG-GTAACAACATTATAACCGCGGTTG 1568 ||| ||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| Sbjct 1488 GGGCGATAACTCGGAACTCACAATACCTTTCAA-GAGTAACAACATTATAACCGCGGTTG 1546 Query 1569 CAGAGAAAATCCCGACTCTAGTGATTTTGTTCTCAGGACGTCCAATGGTTTTAGAGCCAA 1628 ||||||||||||||||||||||||| || |||||||||||||| |||||||| ||||||| Sbjct 1547 CAGAGAAAATCCCGACTCTAGTGATCTTATTCTCAGGACGTCCTATGGTTTTGGAGCCAA 1606 Query 1629 CGGTTCTTGAAAAGACTGAAGCTTTGGTCGCTGCTTGGTTCCCTGGAACTGAAGGGCAAG 1688 |||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct 1607 CGGTTCTTGAAAAGACCGAGGCTTTGGTCGCTGCTTGGTTCCCTGGAACCGAAGGGCAAG 1666 Query 1689 GGATGAGTGATGTGATTTTCGGAGATTATGACTTCAAAGGGAAGTTACCAGTGAGCTGGT 1748 |||| | |||||| ||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 1667 GGATTACTGATGTCATTTTTGGAAATTATGACTTCAAAGGGAAGTTACCAGTGAGCTGGT 1726 Query 1749 TCAAACGCGTTGACCAGTTGCCGTTAAACGCTGAAGCAAATTCGTATGACCCATTGTTTC 1808 |||||||||| |||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct 1727 TCAAACGCGTAGACCAGTTGCCGCTAAACGCTGATGCCGATTCGTATGACCCATTGTTTC 1786 Query 1809 CTCTTGGTTTCGGTCTCACTTCCAATTTCGGTT 1841 || |||||||||||||||||||||||| ||||| Sbjct 1787 CTATTGGTTTCGGTCTCACTTCCAATTCCGGTT 1819 > Ahg485079 jgi|Araly1|485079|fgenesh2_kg.5__1071__AT3G47000.1 Length=2011 Score = 1832 bits (992), Expect = 0.0 Identities = 1555/1826 (85%), Gaps = 42/1826 (2%) Strand=Plus/Plus Query 26 GAGGAGTCTTCATGGGTTTACAAGAACCGAGACGCGCCGGTGGAGGCGCGTGTGAAGGAC 85 |||||||| ||||| ||||||||||||| ||||||||| ||||||| |||||| |||||| Sbjct 29 GAGGAGTCATCATGCGTTTACAAGAACCAAGACGCGCCAGTGGAGGTGCGTGTAAAGGAC 88 Query 86 CTTCTCTCTCGCATGACTTTGCCGGAGAAGATTGGTCAGATGACTCAGATAGAACGCTCC 145 |||||||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct 89 CTTCTCTCTCGCATGACTTTGCCGGAGAAGATCGGTCAGATGACTCAAATCGAACGCAGA 148 Query 146 GTCGCTTCTC-CTCAAGTCATTACTA-A-TTCTTTCATCGGCAGTGTA-CAGAGCGGCGC 201 |||||||||| | | | | |||| | | ||| |||||||| |||||| | | || || Sbjct 149 GTCGCTTCTCACGC-CGCCTTTAC-AGATTTC-TTCATCGGAAGTGTATTA-AACGCCGG 204 Query 202 CGGAAGTTG-GCCGTTGGAGGATGCTAAGTCGTCGGATTGGGCTGATATGATCGACGGTT 260 || || || |||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 205 AGGGAG-TGTGCCGTTTGAGGATGCTAAGTCGTCGGATTGGGCTGATATGATCGACAGTT 263 Query 261 TTCAGCGTTCAGCGTTAGCGTCGCGTTTGGGAATTCCAATAATCTACGGCACTGACGCCG 320 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct 264 TTCAGCGTTCAGCGTTAGCGTCGCGTTTGGGAATTCCAATCATCTACGGTACTGACGCTG 323 Query 321 TTCACGGCAACAATAACGTCTACGGCGCCACCGTCTTCCCCCACAACATTGGACTCGGCG 380 | ||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||| | Sbjct 324 TCCACGGGAACAACAATGTCTACGGCGCCACCGTCTTCCCCCACAACATTGGCCTCGGAG 383 Query 381 CCACCAGAGACGCAGATTTGGTCAA-AAGAATTGGTGCTGCAACAGCACTTGAAATAAGG 439 |||||||||||||||||||||| || ||||||||| |||||||| |||||||||||||| Sbjct 384 CCACCAGAGACGCAGATTTGGT-AAGAAGAATTGGAGCTGCAACTGCACTTGAAATAAGA 442 Query 440 GCTAGTGGCGTTCACTGGACGTTTGCTCCTTGTGTGGCCGTTTTGGGAGATCCGAGGTGG 499 || || || | ||| ||| ||||||||||||| |||||||||||| |||||||||| ||| Sbjct 443 GCGAGCGGGGCTCATTGGGCGTTTGCTCCTTGCGTGGCCGTTTTGAGAGATCCGAGATGG 502 Query 500 GGACGATGCTATGAAAGTTATAGTGAAGCTGCTAAAATTGTATGTGAGATGAGTTTGCTT 559 |||||||||||||| |||||| | |||| | || | |||| |||||||||| || |||| Sbjct 503 GGACGATGCTATGAGAGTTATGGAGAAGATCCTGGACTTGTCTGTGAGATGACTTCGCTT 562 Query 560 ATCTCGGGCCTACAAGGCGAGCCACCTGAAGAACACCCTTACGGTTACCCTTTTCTTGCA 619 ||||||| |||||||||| |||||| ||||||||||| | ||||| |||||| |||| Sbjct 563 GTCTCGGGACTACAAGGCGTGCCACCAGAAGAACACCCAAATGGTTATCCTTTTGTTGCG 622 Query 620 GGAAGAAACAACGT-GATCGCGTGTG-CTAAACACTTTGTTGGAGATGGTGGTACTGAGA 677 ||||||||||| || | ||||||||| | |||||||||||||||||||||||||| || | Sbjct 623 GGAAGAAACAATGTCG-TCGCGTGTGTC-AAACACTTTGTTGGAGATGGTGGTACCGACA 680 Query 678 AAGGCTTAAGCGAAGGGAACACTATAACATCATATGAAGACTTGGAGAAAATACATGTTG 737 | ||| ||| |||||||||||| || | |||||||||||||| ||||| ||||| || Sbjct 681 AGGGCGTAAACGAAGGGAACACCATTGCGTCATATGAAGACTTAGAGAAGATACACATTC 740 Query 738 CTCCCTATCTTAATTGTATTGCTCAGGGAGTGTCGACCGTTATGGCCTCATTT-TCCAGT 796 |||| ||||| || ||| ||||||||||||| || || |||||||| || || |||||| Sbjct 741 CTCCATATCTGAACTGTCTTGCTCAGGGAGTCTCCACGGTTATGGCATC-TTACTCCAGT 799 Query 797 TGGAATGGAAGTAGACTCCACTCCGACTATTTCCTTTTGACTGAAGTTCTTAAAC-AGAA 855 |||||||||| |||||| ||| | |||| ||| || ||||| ||| |||| ||| | || Sbjct 800 TGGAATGGAACTAGACTTCACGCTGACTGTTTTCTCTTGACAGAAATTCT-AAAGGAAAA 858 Query 856 ACTCGGTTTCAAGGGATTTCTAGTTTCAGACTGGGATGGTTTGGAGACGA-TAAGCGAGC 914 |||||||||||||||||||||||| ||||||||||| |||||||| || | || |||| Sbjct 859 ACTCGGTTTCAAGGGATTTCTAGTCTCAGACTGGGAAGGTTTGGAC-CGGCTTAGTGAGC 917 Query 915 CAGAAGGTTCCAACTACCGTAACTGCGTCAAA-CT-CGGGATTAATGCTGGAATCGACAT 972 | | || || ||||||||| ||||| | ||| || ||| |||||||||| || ||||| Sbjct 918 CTCAGGGATCAAACTACCGTTACTGCATTAAAACTGCGG--TTAATGCTGGCATTGACAT 975 Query 973 GGTGATGGTGCCTTTCAAGTACGAACAGTTCATACAGGACATGACAGATTTGGTGGAGTC 1032 ||| ||||| || |||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 976 GGTTATGGTACCATTCAAGTACGAACAGTTCATACAGGACATGACAGATCTGGTAGAGTC 1035 Query 1033 AGGGGAAATA-CCAATGGCTCGGGTCAATGATGCTGTTGAAAGAATACTAAGAGTGAAGT 1091 |||||||||| ||| ||| |||||||||||||||||||||||||||| | |||||||| | Sbjct 1036 AGGGGAAATATCCA-TGGATCGGGTCAATGATGCTGTTGAAAGAATAGTCAGAGTGAAAT 1094 Query 1092 TTGTTGCTGGTCTCTTTGAACATCCTCTTGCGGACCGATCTTTGTTGGGAACTGTTGGCT 1151 |||| ||||||||||| ||| ||||||| | || ||||| ||||| | |||||| | Sbjct 1095 TTGTCGCTGGTCTCTTCGAATATCCTCTCACAGATCGATCATTGTTACCTATTGTTGGTT 1154 Query 1152 GCAAGGAACATAGAGAAGTGGCAC-GTGAAGCGGTTAGAAAGTCATTAGTGT-TGCTGAA 1209 ||||||||||||||||| |||| | | ||||| ||||||||||| ||||| | |||| || Sbjct 1155 GCAAGGAACATAGAGAATTGGCGCAG-GAAGCAGTTAGAAAGTCGTTAGT-TCTGCTAAA 1212 Query 1210 GAATGGTAAAAATGCTGATACACCATTTCTACCACTAGACCGCAATGCCAAGAGGATTCT 1269 |||||| ||||||||||||| ||||||||| |||||||| ||| | |||||||||||||| Sbjct 1213 GAATGGCAAAAATGCTGATAAACCATTTCTGCCACTAGATCGCCACGCCAAGAGGATTCT 1272 Query 1270 AGTGGTTGGAA-TGCATGCAAACGATCTTGGAAATCAGTGTGGAGGATGGACAAAGATAA 1328 ||| ||||| | || ||| | ||||||||| ||||||| |||||||||||||||| | Sbjct 1273 AGTCACTGGAACT-CACGCAGATGATCTTGGATATCAGTGCGGAGGATGGACAAAGACAT 1331 Query 1329 AATCCGGTCAAAGCGGCAGAATCACAATTGGCACGACGCTTTTGGATTCAATAAAAGCAG 1388 | ||||| ||||||||| |||||||| ||||||||||||||||| | || |||| || Sbjct 1332 GGTTCGGTCTAAGCGGCAGGATCACAATCGGCACGACGCTTTTGGACGCCATTAAAGAAG 1391 Query 1389 CAGTTGGAGACAAAACTGAAGTCATCT-TCGAGAAAACTCCAACAAAGGAAACCTTAGCA 1447 ||||||||||| |||||||||| |||| | |||||||||||| |||||||||||||||| Sbjct 1392 CAGTTGGAGACGAAACTGAAGTAATCTAT-GAGAAAACTCCATCAAAGGAAACCTTAGCC 1450 Query 1448 TCAAGTGATGGCTTCTCATACGCCATTGTTGCAGTGGGGGAACCTCCATACGCAGAAATG 1507 |||||||| || ||||| ||||||||||||||||| |||||||| || || ||||| | | Sbjct 1451 TCAAGTGAAGGATTCTCTTACGCCATTGTTGCAGTCGGGGAACCGCCCTATGCAGAGACG 1510 Query 1508 AAGGGAGATAACTCGGAACTCACTATACC-TTTCAATGGTAACAACATTATAACCGCGGT 1566 | ||| |||||||||||||||| ||| | ||| ||||||| | ||||| |||| ||||| Sbjct 1511 ATGGGGGATAACTCGGAACTCAAAATATCATTT-AATGGTAGCGACATTGTAACTGCGGT 1569 Query 1567 TGCAGAGAAAATCCCGACTCTAGTGATTTTGTTCTCAGGACGTCCAATGGTTTTAGAGCC 1626 ||||||| |||||||||||| ||||| ||| |||||||||| || ||||| | ||||| Sbjct 1570 AGCAGAGATAATCCCGACTCTGGTGATCTTGATCTCAGGACGACCTGTGGTTCTGGAGCC 1629 Query 1627 AACGGTTCTTGAAAAGACTGAAGCTTTGGTCGCTGCTTGGTTCCCTGGAACTGAAGGGCA 1686 ||||||||||||||||| || ||| |||||||||||||| | |||||||| |||||||| Sbjct 1630 GACGGTTCTTGAAAAGACAGAGGCTCTGGTCGCTGCTTGGCTGCCTGGAACAGAAGGGCA 1689 Query 1687 AGGGATGAG-TGATGTGATTTTCGGAGATTATGACTTCAAAGGGAAGTTACCAGTGAGCT 1745 ||||||| | ||| || ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct 1690 AGGGATG-GCTGACGTTATTTTTGGAGATTATGACTTCAAGGGGAAGTTACCAGTGAGTT 1748 Query 1746 GGTTCAAACGCGTTGACCAGTTGCCGTTAAACGCTGA-AGCAAATTCGTATGACCCATTG 1804 |||||||||| ||||| || ||||| || | ||| | | ||| |||||||||||||||| Sbjct 1749 GGTTCAAACGTGTTGAGCATTTGCCACTAGATGCTCAGACCAA-TTCGTATGACCCATTG 1807 Query 1805 TTTCCTCTTGGTTTCGGTCTCACTTC 1830 || ||| ||||||||||||||| ||| Sbjct 1808 TTCCCTTTTGGTTTCGGTCTCAATTC 1833 > Ahg485082 jgi|Araly1|485082|fgenesh2_kg.5__1074__AT3G47050.1 Length=1905 Score = 1596 bits (864), Expect = 0.0 Identities = 1512/1823 (83%), Gaps = 52/1823 (3%) Strand=Plus/Plus Query 25 TGAGGAGTCTTCATGGGTTTACAAGAACCGAGACGCGCCGGTGGAGGCGCGTGTGAAGGA 84 |||| |||| ||||| |||||||||||||| |||||||| ||||||||||||||||| || Sbjct 36 TGAGAAGTCGTCATGTGTTTACAAGAACCGCGACGCGCCAGTGGAGGCGCGTGTGAAAGA 95 Query 85 CCTTCTCTCTCGCATGACTTTGCCGGAGAAGATTGGTCAGATGACTCAGATAGAACGCTC 144 |||||||||||| |||||| |||| ||||| || || ||||||||| ||| |||||| Sbjct 96 CCTTCTCTCTCGGATGACTCTGCCTGAGAAAATCGGCCAGATGACTTTGATCGAACGCAG 155 Query 145 CGTCGCTTCT-CCTCAAGTCATTACTA-A-TTCTTTCATCGGCAGTGTACAGAGCGGCGC 201 || |||||| | ||||||| | | ||| | |||||| ||||||| || || ||| Sbjct 156 TGTGGCTTCTGAGGC-CGTCATTA-GAGATTTC-TCCATCGGTAGTGTACTGAACGCCGC 212 Query 202 CGGAAGTTGGCCGTTGGAGGATGCTAAGTCGTCGGATTGGGCTGATATGATCGACGGTTT 261 ||||||||||| || |||||||| ||||||||| ||||||| |||||||||||||| || Sbjct 213 AGGAAGTTGGCCATTCGAGGATGCAAAGTCGTCGAATTGGGCGGATATGATCGACGGCTT 272 Query 262 TCAGCGTTCAGCGTTAGCGTCGCGTTTGGGAATTCCAATAATCTACGGCACTGACGCCGT 321 ||||| |||||||||| |||||||||||||||||| ||||| ||||||| ||||||| | Sbjct 273 CCAGCGATCAGCGTTAGAGTCGCGTTTGGGAATTCCCATAATTTACGGCATTGACGCCAT 332 Query 322 TCACGGCAACAATAACGTCTACGGCGCCACCGTCTTCCCCCACAACATTGGACTCGGCGC 381 ||| ||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||| Sbjct 333 TCATGGCAACAATGACGTCTATGGCGCCACCATCTTCCCCCACAACATTGGTCTCGGCGC 392 Query 382 CACCAGAGACGCAGATTTGGTCAAAAGAATTGGTGCTGCAACAGCACTTGAAATAAGGGC 441 ||||||||| ||||||||||||||||||||||| |||||||||||||||||| | ||||| Sbjct 393 CACCAGAGATGCAGATTTGGTCAAAAGAATTGGAGCTGCAACAGCACTTGAAGTTAGGGC 452 Query 442 TAGTGGCGTTCACTGGACGTTTGCTCCTTGTGTGGCCGTTTTGGGAGATCCGAGGTGGGG 501 || || ||||||||| |||||||||| || || || || || ||||||||| ||||| Sbjct 453 GAGCGGTGTTCACTGGTCGTTTGCTCCATGCGTCGCTGTGGTGAAAGATCCGAGATGGGG 512 Query 502 ACGATGCTATGAAAGTTATAGTGAAGCTGCTAAAATTGTATGTGAGATGAGTTTGCTTAT 561 | |||||||||| |||||| |||||| |||| |||||| | |||||||| || ||| | Sbjct 513 AAGATGCTATGAGAGTTATGGTGAAGTTGCTCCAATTGTTTCTGAGATGACTTCACTTGT 572 Query 562 CTCGGGCCTACAAGGCGAGCCA-CCTGAAGAACACCCTTA-CGGTTACCCTTTTCTTGCA 619 ||| || ||||||||||||||| || |||||||| | || |||||||||||||| |||| Sbjct 573 CTCAGGTCTACAAGGCGAGCCATCC-AAAGAACACAC-TAGCGGTTACCCTTTTCATGCA 630 Query 620 GGAAGAAACAACGTGATCGCGTGTGCTAAACACTTTGTTGGAGATGGTGGTACTGAGAAA 679 |||||||| |||||| | |||||||| || |||||||||||||| |||||||| || || Sbjct 631 GGAAGAAAAAACGTGGTTGCGTGTGCCAAGCACTTTGTTGGAGACGGTGGTACCGA-TAA 689 Query 680 GG-CTTAAGCGAAGGGAACACTATAACAT-C-ATATGAAGACTTGGAGA--AAATACATG 734 || | ||| ||||| ||||| || | | |||||||||||||||| ||| ||| Sbjct 690 GGCCATAAATGAAGGAAACACCAT--TTTGCGGTATGAAGACTTGGAGAGGAAACACA-- 745 Query 735 TTGCTCCCTATCTTAATTGTATTGCTCAGGGAGTGTCGACCGTTATGGCCTCATT-TTCC 793 ||||||||||| || |||||| |||| ||||| || |||||||||| ||| || || Sbjct 746 TTGCTCCCTATAAGAAATGTATTTCTCAAGGAGTCTCTACCGTTATGGTCTC-TTACTCT 804 Query 794 AGTTGGAATGGAAG-TAGACTCCACTCCGACTATTTCCTTTTGACTGAAGTTCTTAAACA 852 |||||||| || || || |||||||||| |||||||||| || || |||||||| ||||| Sbjct 805 AGTTGGAACGG-AGATAAACTCCACTCCCACTATTTCCTCTTAACGGAAGTTCTCAAACA 863 Query 853 GAAACTCGGTTTCAAGGGATTTCTAGTTTCAGACTGGGATGGTTTGGAGAC-GATAAGCG 911 ||||||||||||| ||||| | |||| ||||||||||| |||||||| | | | |||| Sbjct 864 AAAACTCGGTTTCAGGGGATATATAGTCTCAGACTGGGAAGGTTTGGA-CCGGCTTAGCG 922 Query 912 AGCCAGAAGGTTCCAACTACCGTAACTGCGTCAAACTCGGGATTAATGCTGGAATCGACA 971 | ||| |||||| |||||||| |||||||||||| | |||||||||||||||||||| | Sbjct 923 ACCCACCAGGTTCAAACTACCGCAACTGCGTCAAAATGGGGATTAATGCTGGAATCGATA 982 Query 972 TGGTGATGGTGCCTTTCAAGTACGAACAGTTCATACAGGACATGACAGATTTGGTGGAGT 1031 |||||||||| ||||||||||| ||| |||||||| | ||| ||| |||| ||||||||| Sbjct 983 TGGTGATGGTACCTTTCAAGTATGAAAAGTTCATAAACGACCTGATAGATCTGGTGGAGT 1042 Query 1032 CAGGGGAAATACCAATGGCTCGGGTCAATGATGCTGTTGAAAGAATACTAAGAGTGAAGT 1091 |||||||| || |||||||| || |||| ||||||||||||||||| |||||||||| Sbjct 1043 CAGGGGAAGTATTGATGGCTCGTGTTGATGACGCTGTTGAAAGAATACTCAGAGTGAAGT 1102 Query 1092 TTGTTGCTGGTCTCTTTGAACATCCTCTTGCGGACCGATCTTTGTTGGGAACTGTTGGCT 1151 ||||||| || ||||| ||| |||||| | || ||||| ||||| | |||||| | Sbjct 1103 TTGTTGCAGGACTCTTCGAATTTCCTCTCACAGATCGATCATTGTTACCTATTGTTGGTT 1162 Query 1152 GCAAGGAACATAGAGAAGTGGCACGTGAAGCGGTTAGAAAGTCATTAGTGT-TGCTGAAG 1210 ||||||||||||||||| |||| |||||||| ||||||||||| |||| | |||| ||| Sbjct 1163 GCAAGGAACATAGAGAATTGGCGCGTGAAGCTGTTAGAAAGTCGCTAGT-TCTGCTAAAG 1221 Query 1211 AATGGTAAAAATGCTGATACACCATTTCTACCACTAGACCGCAATGCCAAGAGGATTCTA 1270 || || ||| ||| | | | |||||| ||| || | |||||||| |||| |||||| Sbjct 1222 AACGGCAAATATG--G--AGA--ATTTCTGCCATTAAATTGCAATGCCGAGAGAATTCTA 1275 Query 1271 GTGGTTGGAATGCATGCAAACGATCTTGGAAATCAGTGTGGAGGATGGACAAAGATAAAA 1330 |||||||||| ||||||| | ||||||||| |||| || || ||||||||||||| || Sbjct 1276 GTGGTTGGAACGCATGCAGATGATCTTGGATATCAATGCGGTGGATGGACAAAGACAATG 1335 Query 1331 TCCGGTCAAAGCGGCAGAATCACA-ATTGGCACGACGCTTTTGGATTCAATAAAAGCAGC 1389 | ||||||||||| || |||||| | |||||| |||||||| ||| |||||||||| || Sbjct 1336 TATGGTCAAAGCGGAAGGATCACAGA-TGGCACAACGCTTTTAGATGCAATAAAAGCGGC 1394 Query 1390 AGTTGGAGACAAAACTGAAGTCATCT-TCGAGAAAACTCCAACAAAGGAAACCTTAGCAT 1448 ||||||||||||||| ||||| |||| | ||||||| |||| || ||||||||||||| | Sbjct 1395 AGTTGGAGACAAAACCGAAGTGATCTAT-GAGAAAAATCCATCAGAGGAAACCTTAGCCT 1453 Query 1449 CAAG-TGATGGCTTCTCATACGCCATTGTTGCAGTGGGGGAACCTCCATACGCAGA-AAT 1506 || | | || | || || || || |||||||| ||||||||| | || || | ||| | | Sbjct 1454 CAGGAT-ATAGATTTTCTTATGCAATTGTTGCGGTGGGGGAATCACCCTATGTAGAGACT 1512 Query 1507 GAAGGGAGATAACTCGGAACTCACTATACCTTTCAATGGTAACAACATTATAACCGCGGT 1566 | ||| |||||||| |||||||| |||||||| || |||| | | |||||||||||||| Sbjct 1513 -ATGGGGGATAACTCAGAACTCACAATACCTTTTAACGGTAGCGAGATTATAACCGCGGT 1571 Query 1567 TGCAGAGAAAATCCCGACTCTAGTGATTTTGTTCTCAGGACGTCCAATGGTT-TTAGAGC 1625 ||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||| Sbjct 1572 TGCAGAGAAAATCCCGACTCTAGTGATCTTGTTCTCAGGACGGCCTATGGTTCTT-GAGC 1630 Query 1626 C--AACGGTTCTTGAAAAGACTGAAGCTTTGGTCGCTGCTTGGTTCCCTGGAACTGAAGG 1683 | || | ||||||||||| | || ||| |||||||||||||| | ||||| |||||||| Sbjct 1631 CGCAA-G-TTCTTGAAAAGGCAGAGGCTCTGGTCGCTGCTTGGCTGCCTGGTACTGAAGG 1688 Query 1684 GCAAGGGAT-GAGTGATGTGATTTTCGGAGATTATGACTTCAAAGGGAAGTTACCAGTGA 1742 |||||||| | |||||| ||||||||||||||||| ||| |||||||||||||| || Sbjct 1689 ACAAGGGATTGC-TGATGTAATTTTCGGAGATTATGAGTTCCGAGGGAAGTTACCAGCGA 1747 Query 1743 GCTGGTTCAAACGCGTTGACCAGTTGCCG-TTAAACGCTGAAGCAAATTCGTATGACCCA 1801 ||||||||||||| || |||||||||||| || | | |||| ||||| |||| |||| Sbjct 1748 GCTGGTTCAAACGTGTAGACCAGTTGCCGCTTGA-CATTGAATCAAATGGGTATCTCCCA 1806 Query 1802 TTGTTTCCTCTTGGTTTCGGTCT 1824 ||||||||||||||||| ||||| Sbjct 1807 TTGTTTCCTCTTGGTTTTGGTCT 1829 > Ahg485080 jgi|Araly1|485080|fgenesh2_kg.5__1072__AT3G47040.1 Length=1791 Score = 970 bits (525), Expect = 0.0 Identities = 839/989 (85%), Gaps = 28/989 (3%) Strand=Plus/Plus Query 866 AAGGGATTTCT-AGTTTCAGACTGGGATGGTTTGGAGAC-GATAAGCGAGCCAGAAGGTT 923 ||||||||| | | |||| |||||||| | |||||| || | | || |||||| |||| Sbjct 781 AAGGGATTTGTCA-TTTCTGACTGGGAAGCTTTGGA-ACGGCTTAGTGAGCCATTCGGTT 838 Query 924 CCAACTACCGTAACTGCGT-CAAA-CTCGGGATTAATGCTGGAATCGACATGGTGATGGT 981 | |||||||| |||||||| ||| ||| | ||||||||||| |||||||||||||||| Sbjct 839 CTAACTACCGCAACTGCGTGAAAACCTC-AG-TTAATGCTGGAGTCGACATGGTGATGGT 896 Query 982 GCCTTTCAAGTACGAACAGTTCATACAGGACATGACAGATTTGGTGGAGTCAGGGGAAAT 1041 |||||||||||| |||||||| ||| ||||| | |||||| ||||||||||||||||| | Sbjct 897 GCCTTTCAAGTATGAACAGTTTATAAAGGACCTCACAGATCTGGTGGAGTCAGGGGAAGT 956 Query 1042 ACCAATGGCTCGGGTCA-ATGATGCTGTTGAAAGAATACTAAGAGTGAAGTTTGTTGCTG 1100 | ||||| ||||| | | ||||||||||||| |||||||| ||||||||||||||||| | Sbjct 957 AACAATGTCTCGGAT-AGATGATGCTGTTGAGAGAATACTTAGAGTGAAGTTTGTTGCGG 1015 Query 1101 GTCTCTTTGAACATCCTCTTG-CGGACCGATCTTTGTTGGGAACTGTTGGCTGCAAGGAA 1159 |||| |||||| ||||||| | ||||||||||||| ||||| |||||||||||||||||| Sbjct 1016 GTCTTTTTGAAAATCCTCT-GACGGACCGATCTTTATTGGGTACTGTTGGCTGCAAGGAA 1074 Query 1160 CATAGAGAAGTGGCACGTGAAGCGGTTAGAAAGTCATTAGTGTTGCTGAAGAATGGTAAA 1219 ||||||||| | || |||||| ||||||||||||| |||||| | |||||||| | ||| Sbjct 1075 CATAGAGAACTAGCTCGTGAATCGGTTAGAAAGTCGTTAGTGCTCCTGAAGAACCGAAAA 1134 Query 1220 AATGCTGATACA-CCATTTCTACCACTAGACCGCAATGCCAAGAGGATTCTAGTGGTTGG 1278 ||| |||| | | |||||||| |||||||| || || |||||||| |||||||| ||| Sbjct 1135 AATTCTGAGA-AGCCATTTCTGCCACTAGATCGTAACGCCAAGAGAATTCTAGTCACTGG 1193 Query 1279 AATGCATGCAAACGATCTTGGAAATCAGTGTGGAGGATGGACAAAGATAAAATCCGGTCA 1338 || ||| | ||||||||||| ||||||| || |||||||||||| | | ||||| Sbjct 1194 AACGCACACGGACGATCTTGGATATCAGTGCGGGGGATGGACAAAGGCATGGTTCGGTCT 1253 Query 1339 AAGCGGCAGAATCACAATTGGCACGACGCTTTTGGATTCAATAAAAGCAGCAGTTGGAGA 1398 ||||||||| |||||||| ||||| ||||||||||| | || |||| |||||||||||| Sbjct 1254 AAGCGGCAGGATCACAATCGGCACAACGCTTTTGGACGCCATTAAAGAAGCAGTTGGAGA 1313 Query 1399 CAAAACTGAAGTCATCTTCGAGAAAACTCCAACA-AAGGAAACCTTAGCATCAAGTG-AT 1456 ||| |||||||| |||| |||||| ||||| | ||| |||| ||||| || ||| | Sbjct 1314 CAAGACTGAAGTGATCTACGAGAAGACTCCTTCCGAAG-AAACTTTAGCCTCG-GTGCAA 1371 Query 1457 GGCTTCTCATACGCCATTGTTGCAGTGGGGGAACCTCCATACGCAGA-A-ATGAAGGGAG 1514 |||||||| |||||||||||||||||||||||| |||| |||||||| | || ||||| Sbjct 1372 GGCTTCTCCTACGCCATTGTTGCAGTGGGGGAAACTCCCTACGCAGAGACATT--GGGAG 1429 Query 1515 ATAACTCGGAACTCACTATACCTTTCAATGGTAACAACATTATAACCGCGGTTGCAGAGA 1574 |||||||||||||||| ||||| || || |||||| ||||| |||||||||||||||||| Sbjct 1430 ATAACTCGGAACTCACAATACCCTTAAACGGTAACGACATTGTAACCGCGGTTGCAGAGA 1489 Query 1575 AAATCCCGACTCTAGT-GATTTTGTTCTCAGGACGTCCAATGGTT-TTAGAGCCAACGGT 1632 |||| ||||||||||| | | |||||||| ||||| || |||||| || ||||| |||| Sbjct 1490 AAATTCCGACTCTAGTTG-TCTTGTTCTCTGGACGGCCTATGGTTCTT-GAGCCGCCGGT 1547 Query 1633 TCTTGAAAAGACTGAAGCTTTGGTCGCTGCTTGGTTCCCTGGAACTGAAGGGCAAGGGAT 1692 |||||||||| |||| ||| |||||||||||||| | |||||||| ||||||||||| || Sbjct 1548 TCTTGAAAAGGCTGAGGCTCTGGTCGCTGCTTGGCTGCCTGGAACCGAAGGGCAAGGAAT 1607 Query 1693 GAGTGATGTGATTTTCGGAGATTATGACTTCAAAGGGAAGTTACCAGTGAGCTGGTTCAA 1752 ||||||||| ||||| |||||||||||||| | |||||||||||||||||||||||||| Sbjct 1608 GAGTGATGTCATTTTTGGAGATTATGACTTTGAGGGGAAGTTACCAGTGAGCTGGTTCAA 1667 Query 1753 ACGCGTTGACCAGTTGCCGTTAAACGCTGAAGCAAATTCGTATGACCCATTGTTTCCTCT 1812 || |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct 1668 ACACGTTGACCAGTTGCCGTTAACCGCTGAAGCCAATTCGTATGATCCATTGTTTCCTCT 1727 Query 1813 TGGTTTCGGTCTCA-CTTCCAATTTCGGT 1840 |||||| ||||||| || | |||| |||| Sbjct 1728 TGGTTTTGGTCTCAACTAC-AATTCCGGT 1755 Score = 353 bits (191), Expect = 2e-96 Identities = 304/358 (85%), Gaps = 10/358 (3%) Strand=Plus/Plus Query 36 CATGGGTTTACAAGAACCGAGACGCGCCGGTGGAGGCGCGTGTGAAGGACCTTCTCTCTC 95 |||| ||||||||||||| ||||||||| |||||||||||||| |||||||||||||||| Sbjct 20 CATGCGTTTACAAGAACCAAGACGCGCCAGTGGAGGCGCGTGTAAAGGACCTTCTCTCTC 79 Query 96 GCATGACTTTGCCGGAGAAGATTGGTCAGATGACTCAGATAGAACGC-TCCGTCGCTTCT 154 |||||||| ||||||| ||||| || |||||||||||||| |||||| | |||| || || Sbjct 80 GCATGACTCTGCCGGAAAAGATAGGCCAGATGACTCAGATCGAACGCGT-CGTCACTACT 138 Query 155 CCTCAAGTCATTACTA-ATT-CTTTCATCGGCAGTGTACAGAGCGGCGCCGGAAGTTGGC 212 | || |||||||| | ||| | |||||||| ||||||| || ||| | |||||||||| Sbjct 139 CATCCCGTCATTAC-AGATTAC-TTCATCGGTAGTGTACTGAACGGTGGAGGAAGTTGGC 196 Query 213 CGTTGGAGGATGCTAAGTCGTCGGATTGGGCTGATATGATCGACGGTTTTCAG--CGTTC 270 |||| |||||||||||| |||||||||||||||||||||||||||||| || || | Sbjct 197 CGTTCGAGGATGCTAAGACGTCGGATTGGGCTGATATGATCGACGGTTACCAAAACG--C 254 Query 271 AGCGTTAGCGTCGCGTTTGGGAATTCCAATAATCTACGGCACTGACGCCGTTCACGGCAA 330 ||||||||||||||| || |||||||| || ||||| |||| ||| || || || ||||| Sbjct 255 AGCGTTAGCGTCGCGCTTAGGAATTCCGATCATCTATGGCATTGATGCTGTCCATGGCAA 314 Query 331 CAATAACGTCTACGGCGCCACCGTCTTCCCCCACAACATTGGACTCGGCGCCACCAGA 388 ||| || |||||||| ||||| |||| ||||||||||| || ||||| ||||||||| Sbjct 315 CAACAATGTCTACGGAGCCACTATCTTTCCCCACAACATAGGCCTCGGAGCCACCAGA 372 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73361811870 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5