BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G47050.1 Length=1928 Score E Sequences producing significant alignments: (Bits) Value Ahg485082 jgi|Araly1|485082|fgenesh2_kg.5__1074__AT3G47050.1 2883 0.0 Ahg485079 jgi|Araly1|485079|fgenesh2_kg.5__1071__AT3G47000.1 1594 0.0 Ahg323329 jgi|Araly1|323329|fgenesh1_pm.C_scaffold_5000873 1445 0.0 Ahg485080 jgi|Araly1|485080|fgenesh2_kg.5__1072__AT3G47040.1 763 0.0 > Ahg485082 jgi|Araly1|485082|fgenesh2_kg.5__1074__AT3G47050.1 Length=1905 Score = 2883 bits (1561), Expect = 0.0 Identities = 1795/1909 (94%), Gaps = 11/1909 (1%) Strand=Plus/Plus Query 9 aagaagaagagaaagaggaagaaAATGGTTGACAATGAGAA---GTCATATGTTTACAAG 65 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 1 AAGAAGAAGAGAAAGAGGAAGAAAATGGTTGACAATGAGAAGTCGTCATGTGTTTACAAG 60 Query 66 AACCGGGAAGCGCCAGTGGAGGCGCGTGT-AAAGGACCTTCTCTCTCGGATGACTCTGGC 124 ||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||| | Sbjct 61 AACCGCGACGCGCCAGTGGAGGCGCGTGTGAAA-GACCTTCTCTCTCGGATGACTCTGCC 119 Query 125 TGAAAAAATCGGCCAGATGACTTTGATCGAACGTAGCGTCGCTTCTGAGGCCGTGATAAG 184 ||| ||||||||||||||||||||||||||||| || || |||||||||||||| || || Sbjct 120 TGAGAAAATCGGCCAGATGACTTTGATCGAACGCAGTGTGGCTTCTGAGGCCGTCATTAG 179 Query 185 AGATTTCTCCATCGGTAGTGTATTGAACCG-CGCAGGAGGTTGGCCATTTGAGGATGCAA 243 |||||||||||||||||||||| |||| || ||||||| |||||||||| |||||||||| Sbjct 180 AGATTTCTCCATCGGTAGTGTACTGAA-CGCCGCAGGAAGTTGGCCATTCGAGGATGCAA 238 Query 244 AGTCGTCGAATTGGGCGGATATGATCGACGGCTTCCAGCGATCAGCGTTAGAGTCGCGTT 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 AGTCGTCGAATTGGGCGGATATGATCGACGGCTTCCAGCGATCAGCGTTAGAGTCGCGTT 298 Query 304 TGGGAATTCCGATAATTTACGGCATTGACGCTGTTCATGGCAACAATGACGTCTACGGCG 363 |||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct 299 TGGGAATTCCCATAATTTACGGCATTGACGCCATTCATGGCAACAATGACGTCTATGGCG 358 Query 364 CCACCATCTTTCCCCACAATATTGGTCTCGGCGCCACTAGAGACGCGGATTTGGTCAAAA 423 |||||||||| |||||||| ||||||||||||||||| ||||| || ||||||||||||| Sbjct 359 CCACCATCTTCCCCCACAACATTGGTCTCGGCGCCACCAGAGATGCAGATTTGGTCAAAA 418 Query 424 GAATTGGAGCTGCAACAGCACTTGAAGTAAGGGCGTGCGGTGCTCACTGGGCGTTTGCTC 483 |||||||||||||||||||||||||||| |||||| |||||| ||||||| ||||||||| Sbjct 419 GAATTGGAGCTGCAACAGCACTTGAAGTTAGGGCGAGCGGTGTTCACTGGTCGTTTGCTC 478 Query 484 CTTGCGTCGCAGTGGTGAAAGATCCGAGATGGGGAAGATGCTATGAGAGCTATGGTGAAG 543 | |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 479 CATGCGTCGCTGTGGTGAAAGATCCGAGATGGGGAAGATGCTATGAGAGTTATGGTGAAG 538 Query 544 TTGCTCAAATTGTTTCTGAGATGACTTCACTTGTCTCGGGTCTACAAGGGGAGCCATCCA 603 |||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 539 TTGCTCCAATTGTTTCTGAGATGACTTCACTTGTCTCAGGTCTACAAGGCGAGCCATCCA 598 Query 604 AAGACCACACAAATGGTTACCCTTTTCTTGCAGGAAGAAAAAACGTGGTTGCGTGTGCCA 663 |||| ||||| | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 599 AAGAACACACTAGCGGTTACCCTTTTCATGCAGGAAGAAAAAACGTGGTTGCGTGTGCCA 658 Query 664 AGCACTTTGTTGGAGATGGTGGTACCAATAAGGCCATAAATGAAGGAAACACCATTTTGC 723 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 659 AGCACTTTGTTGGAGACGGTGGTACCGATAAGGCCATAAATGAAGGAAACACCATTTTGC 718 Query 724 GGTACGAAGACTTGGAGAGAAAACACATTGCTCCCTATAAGAAGTGTATTTCTCAAGGAG 783 |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct 719 GGTATGAAGACTTGGAGAGGAAACACATTGCTCCCTATAAGAAATGTATTTCTCAAGGAG 778 Query 784 TCTCTACCGTTATGGCCTCTTACTCCAGTTGGAACGGAGATAAACTTCACTCACACTACT 843 ||||||||||||||| ||||||||| |||||||||||||||||||| ||||| ||||| | Sbjct 779 TCTCTACCGTTATGGTCTCTTACTCTAGTTGGAACGGAGATAAACTCCACTCCCACTATT 838 Query 844 TCCTCTTAACGGAAATTCTCAAACAAAAACTTGGTTTCAAGGGTTATGTAGTTTCGGACT 903 |||||||||||||| |||||||||||||||| ||||||| ||| ||| |||| || |||| Sbjct 839 TCCTCTTAACGGAAGTTCTCAAACAAAAACTCGGTTTCAGGGGATATATAGTCTCAGACT 898 Query 904 GGGAAGGTTTGGACCGGCTTAGCGACCCACCAGGTTCAAACTACCGCAACTGCGTCAAAA 963 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 899 GGGAAGGTTTGGACCGGCTTAGCGACCCACCAGGTTCAAACTACCGCAACTGCGTCAAAA 958 Query 964 TAGGGATTAATGCTGGAATCGATATGGTGATGGTACCTTTCAAGTATGAACAGTTTAGAA 1023 | |||||||||||||||||||||||||||||||||||||||||||||||| |||| | || Sbjct 959 TGGGGATTAATGCTGGAATCGATATGGTGATGGTACCTTTCAAGTATGAAAAGTTCATAA 1018 Query 1024 ATGACTTGATAGATCTAGTGGAGTCAGGGGAAGTATCGATGGCTCGTGTTAATGACGCTG 1083 | ||| |||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 1019 ACGACCTGATAGATCTGGTGGAGTCAGGGGAAGTATTGATGGCTCGTGTTGATGACGCTG 1078 Query 1084 TTGAAAGAATACTTAGAGTAAAGTTTGTTGCAGGACTCTTCGAATTTCCTCTTACAGATC 1143 ||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 1079 TTGAAAGAATACTCAGAGTGAAGTTTGTTGCAGGACTCTTCGAATTTCCTCTCACAGATC 1138 Query 1144 GATCTTTGTTACCTACTGTTGGTTGCAAGGAACATAGAGAGTTGGCGCGTGAAGCGGTTA 1203 |||| |||||||||| |||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1139 GATCATTGTTACCTATTGTTGGTTGCAAGGAACATAGAGAATTGGCGCGTGAAGCTGTTA 1198 Query 1204 GAAAGTCGTTAGTTCTGCTAAAGAACGGCAGATATGGAGAATTTCTGCCATTAAATTGCA 1263 |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1199 GAAAGTCGCTAGTTCTGCTAAAGAACGGCAAATATGGAGAATTTCTGCCATTAAATTGCA 1258 Query 1264 ATGCCGAGAGAATTCTAGTGGTTGGAACGCATGCAGATGATCTTGGATATCAATGCGGTG 1323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 ATGCCGAGAGAATTCTAGTGGTTGGAACGCATGCAGATGATCTTGGATATCAATGCGGTG 1318 Query 1324 GATGGACAAAGACAATGTATGGTCAAAGCGGAAGGATCACAGATGGCACAACGCTTTTAG 1383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1319 GATGGACAAAGACAATGTATGGTCAAAGCGGAAGGATCACAGATGGCACAACGCTTTTAG 1378 Query 1384 ATGCCATAAAAGCGGCAGTTGGAGACGAAACCGAAGTGATCTATGAGAAAAGTCCATCAG 1443 |||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 1379 ATGCAATAAAAGCGGCAGTTGGAGACAAAACCGAAGTGATCTATGAGAAAAATCCATCAG 1438 Query 1444 AGGAAACCTTAGCCTCAGGATATAGATTTTCTTATGCAATTGTTGCGGTGGGAGAATCGC 1503 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1439 AGGAAACCTTAGCCTCAGGATATAGATTTTCTTATGCAATTGTTGCGGTGGGGGAATCAC 1498 Query 1504 CCTATGCAGAGACTATGGGGGATAATTCAGAACTCGTAATACCTTTCAATGGTAGCGAGA 1563 |||||| |||||||||||||||||| ||||||||| ||||||||| || |||||||||| Sbjct 1499 CCTATGTAGAGACTATGGGGGATAACTCAGAACTCACAATACCTTTTAACGGTAGCGAGA 1558 Query 1564 TTATAACCACGGTTGCAGAGAAAATACCGACTCTAGTGATCTTGTTCTCAGGACGGCCTA 1623 |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1559 TTATAACCGCGGTTGCAGAGAAAATCCCGACTCTAGTGATCTTGTTCTCAGGACGGCCTA 1618 Query 1624 TGTTTCTTGAGCCGCAAGTTCTTGAAAAGGCAGAGGCGCTGGTCGCTGCTTGGCTGCCTG 1683 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1619 TGGTTCTTGAGCCGCAAGTTCTTGAAAAGGCAGAGGCTCTGGTCGCTGCTTGGCTGCCTG 1678 Query 1684 GTACAGAAGGGCAAGGGATTGCTGATGTAATATTCGGAGATTATGACTTCCGAGGGAAGT 1743 |||| ||||| |||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 1679 GTACTGAAGGACAAGGGATTGCTGATGTAATTTTCGGAGATTATGAGTTCCGAGGGAAGT 1738 Query 1744 TACCAGCAA-CATGGTTCAAACGTGTAGACCAGTTACCTCTTGACATCGAATCAAATGGG 1802 ||||||| | | ||||||||||||||||||||||| || |||||||| |||||||||||| Sbjct 1739 TACCAGCGAGC-TGGTTCAAACGTGTAGACCAGTTGCCGCTTGACATTGAATCAAATGGG 1797 Query 1803 TATTTGCCATTGTTTCCTCTTGGTTTTGGTCTCAATGGTGATTCCGTGGAGAACTCTGAC 1862 ||| | |||||||||||||||||||||||||| ||| ||||||||| ||||||||| || Sbjct 1798 TATCTCCCATTGTTTCCTCTTGGTTTTGGTCTGAATCGTGATTCCGCGGAGAACTC-GAA 1856 Query 1863 AC-GGTTTAAATTTGTTGTTGAATATCTTTAACAAAATTTCAAGGGACT 1910 | ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1857 AATGGTTTAAATTTGTAGTTGAATATCTTTAACAAAATTTCAAGGGACT 1905 > Ahg485079 jgi|Araly1|485079|fgenesh2_kg.5__1071__AT3G47000.1 Length=2011 Score = 1594 bits (863), Expect = 0.0 Identities = 1537/1857 (83%), Gaps = 68/1857 (4%) Strand=Plus/Plus Query 21 aagag-gaagaaAATGGTTGACAATGAGAAGTCAT-AT--GTTTACAAGAACCGGGAAGC 76 ||||| ||||||||||| | ||| ||| |||||| || ||||||||||||| || || Sbjct 4 AAGAGTAAAGAAAATGGTGGTCAAGGAGGAGTCATCATGCGTTTACAAGAACCAAGACGC 63 Query 77 GCCAGTGGAGGCGCGTGTAAAGGACCTTCTCTCTCGGATGACTCTGGCTGAAAAAATCGG 136 ||||||||||| |||||||||||||||||||||||| |||||| || | || || ||||| Sbjct 64 GCCAGTGGAGGTGCGTGTAAAGGACCTTCTCTCTCGCATGACTTTGCCGGAGAAGATCGG 123 Query 137 CCAGATGACTTTGATCGAACGTAGCGTCGCTTCTGAGGCCGTGATAAGAGATTTCTCCAT 196 ||||||||| |||||||| || ||||||||| | |||| | | |||||||| ||| Sbjct 124 TCAGATGACTCAAATCGAACGCAGAGTCGCTTCTCACGCCGCCTTTACAGATTTCTTCAT 183 Query 197 CGGTAGTGTATTGAACCG-CGCA-GGAGGTTG-GCCATTTGAGGATGCAAAGTCGTCGAA 253 ||| |||||||| || || || | ||| | || ||| ||||||||||| ||||||||| | Sbjct 184 CGGAAGTGTATT-AAACGCCGGAGGGA-G-TGTGCCGTTTGAGGATGCTAAGTCGTCGGA 240 Query 254 TTGGGCGGATATGATCGACGGCTTCCAGCGATCAGCGTTAGAGTCGCGTTTGGGAATTCC 313 |||||| |||||||||||| | || ||||| |||||||||| |||||||||||||||||| Sbjct 241 TTGGGCTGATATGATCGACAGTTTTCAGCGTTCAGCGTTAGCGTCGCGTTTGGGAATTCC 300 Query 314 GATAATTTACGGCATTGACGCTGTTCATGGCAACAATGACGTCTACGGCGCCACCATCTT 373 || || ||||| | ||||||||| || || ||||| | ||||||||||||||| |||| Sbjct 301 AATCATCTACGGTACTGACGCTGTCCACGGGAACAACAATGTCTACGGCGCCACCGTCTT 360 Query 374 TCCCCACAATATTGGTCTCGGCGCCACTAGAGACGCGGATTTGGTCAA-AAGAATTGGAG 432 |||||||| ||||| ||||| ||||| |||||||| |||||||| || ||||||||||| Sbjct 361 CCCCCACAACATTGGCCTCGGAGCCACCAGAGACGCAGATTTGGT-AAGAAGAATTGGAG 419 Query 433 CTGCAACAGCACTTGAAGTAAGGGCGTGCGGTGCTCACTGGGCGTTTGCTCCTTGCGTCG 492 ||||||| ||||||||| |||| ||| |||| ||||| |||||||||||||||||||| | Sbjct 420 CTGCAACTGCACTTGAAATAAGAGCGAGCGGGGCTCATTGGGCGTTTGCTCCTTGCGTGG 479 Query 493 CAGTGGTGAAAGATCCGAGATGGGGAAGATGCTATGAGAGCTATGGTGAAGTTGCTCAAA 552 | || ||| |||||||||||||||| ||||||||||||| ||||| |||| | || | Sbjct 480 CCGTTTTGAGAGATCCGAGATGGGGACGATGCTATGAGAGTTATGGAGAAGATCCTGGAC 539 Query 553 TTGTTTCTGAGATGACTTCACTTGTCTCGGGTCTACAAGGGGAGCCATCCA-AAGACCAC 611 |||| | |||||||||||| ||||||||||| |||||||| | |||| ||| |||| ||| Sbjct 540 TTGTCTGTGAGATGACTTCGCTTGTCTCGGGACTACAAGGCGTGCCA-CCAGAAGAACAC 598 Query 612 ACAAATGGTTACCCTTTTCTTGCAGGAAGAAAAAACGTGGTTGCGTGTGCCAAGCACTTT 671 |||||||||| |||||| |||| |||||||| || || || ||||||| ||| |||||| Sbjct 599 CCAAATGGTTATCCTTTTGTTGCGGGAAGAAACAATGTCGTCGCGTGTGTCAAACACTTT 658 Query 672 GTTGGAGATGGTGGTACCAATAAGGCCATAAATGAAGGAAACACCATTTTGCG--GTACG 729 |||||||||||||||||| | |||| | |||| ||||| ||||||| ||||| || | Sbjct 659 GTTGGAGATGGTGGTACCGACAAGGGCGTAAACGAAGGGAACACCA--TTGCGTCATATG 716 Query 730 AAGACTTGGAGAGAA-A-ACACATTGCTCCCTATAAGAAGTGTATTTCTCAAGGAGTCTC 787 ||||||| |||||| | ||||||| |||| ||| ||| ||| || |||| |||||||| Sbjct 717 AAGACTT--AGAGAAGATACACATTCCTCCATATCTGAACTGTCTTGCTCAGGGAGTCTC 774 Query 788 TACCGTTATGGCCTCTTACTCCAGTTGGAACGGAGA-TAAACTTCACTCACACTACTTCC 846 || |||||||| ||||||||||||||||| ||| | || ||||||| | ||| || | Sbjct 775 CACGGTTATGGCATCTTACTCCAGTTGGAATGGA-ACTAGACTTCACGCTGACTGTTTTC 833 Query 847 TCTTAACGGAAATTCTCAAA-CAAAAACTTGGTTTCAAGGG-TTATGTAGTTTCGGACTG 904 |||| || |||||||| ||| ||||||| ||||||||||| || | |||| || ||||| Sbjct 834 TCTTGACAGAAATTCT-AAAGGAAAAACTCGGTTTCAAGGGATT-TCTAGTCTCAGACTG 891 Query 905 GGAAGGTTTGGACCGGCTTAGCGACCCACCA-GGTTCAAACTACCGCAACTGCGTCAAAA 963 ||||||||||||||||||||| || || || || ||||||||||| ||||| | |||| Sbjct 892 GGAAGGTTTGGACCGGCTTAGTGAGCC-TCAGGGATCAAACTACCGTTACTGCATTAAAA 950 Query 964 -TAG-GGATTAATGCTGGAATCGATATGGTGATGGTACCTTTCAAGTATGAACAGTTTAG 1021 | | || |||||||||| || || ||||| |||||||| |||||||| |||||||| | Sbjct 951 CT-GCGG-TTAATGCTGGCATTGACATGGTTATGGTACCATTCAAGTACGAACAGTTCAT 1008 Query 1022 AAATGACTTGATAGATCTAGTGGAGTCAGGGGAAGTATCGATGGCTCGTGTTAATGACGC 1081 | | ||| ||| |||||| || |||||||||||| |||| |||| ||| || ||||| || Sbjct 1009 ACAGGACATGACAGATCTGGTAGAGTCAGGGGAAATATCCATGGATCGGGTCAATGATGC 1068 Query 1082 TGTTGAAAGAATACTTAGAGT-AAAGTTTGTTGCAGGACTCTTCGAATTTCCTCTTACAG 1140 ||||||||||||| | ||||| ||| ||||| || || |||||||||| |||||| |||| Sbjct 1069 TGTTGAAAGAATAGTCAGAGTGAAA-TTTGTCGCTGGTCTCTTCGAATATCCTCTCACAG 1127 Query 1141 ATCGATCTTTGTTACCTACTGTTGGTTGCAAGGAACATAGAGAGTTGGCGC-GTGAAGCG 1199 ||||||| |||||||||| |||||||||||||||||||||||| ||||||| | ||||| Sbjct 1128 ATCGATCATTGTTACCTATTGTTGGTTGCAAGGAACATAGAGAATTGGCGCAG-GAAGCA 1186 Query 1200 GTTAGAAAGTCGTTAGTTCTGCTAAAGAACGGCAGATATG--GAGAA----TTTCTGCCA 1253 ||||||||||||||||||||||||||||| |||| | ||| || || ||||||||| Sbjct 1187 GTTAGAAAGTCGTTAGTTCTGCTAAAGAATGGCAAAAATGCTGATAAACCATTTCTGCCA 1246 Query 1254 TTAAATTGCAATGCCGAGAGAATTCTAGTGGTTGGAACGCATGCAGATGATCTTGGATAT 1313 || || || | ||| |||| |||||||| |||||| || |||||||||||||||||| Sbjct 1247 CTAGATCGCCACGCCAAGAGGATTCTAGTCACTGGAACTCACGCAGATGATCTTGGATAT 1306 Query 1314 CAATGCGGTGGATGGACAAAGACAATG-TAT-GGTCAAAGCGGAAGGATCACAGAT-GGC 1370 || ||||| ||||||||||||||| || | | |||| |||||| ||||||||| || ||| Sbjct 1307 CAGTGCGGAGGATGGACAAAGACA-TGGT-TCGGTCTAAGCGGCAGGATCACA-ATCGGC 1363 Query 1371 ACAACGCTTTTAGATGCCATAAAAGCGGCAGTTGGAGACGAAACCGAAGTGATCTATGAG 1430 || |||||||| || ||||| |||| ||||||||||||||||| ||||| ||||||||| Sbjct 1364 ACGACGCTTTTGGACGCCATTAAAGAAGCAGTTGGAGACGAAACTGAAGTAATCTATGAG 1423 Query 1431 AAAAGTCCATCAGAGGAAACCTTAGCCTCAGGAT-ATAG-ATTTTCTTATGCAATTGTTG 1488 |||| ||||||| ||||||||||||||||| | | | || ||| ||||| || ||||||| Sbjct 1424 AAAACTCCATCAAAGGAAACCTTAGCCTCAAG-TGA-AGGATTCTCTTACGCCATTGTTG 1481 Query 1489 CGGT-GGGAGAATCGCCCTATGCAGAGACTATGGGGGATAATTCAGAACTCGTAATACC- 1546 | || ||| ||| |||||||||||||||| ||||||||||| || |||||| |||| | Sbjct 1482 CAGTCGGG-GAACCGCCCTATGCAGAGACGATGGGGGATAACTCGGAACTCAAAATATCA 1540 Query 1547 TTTCAATGGTAGCGAGATTATAACCACGGTTGCAGAGAAAATACCGACTCTAGTGATCTT 1606 ||| ||||||||||| ||| |||| |||| ||||||| ||| |||||||| |||||||| Sbjct 1541 TTT-AATGGTAGCGACATTGTAACTGCGGTAGCAGAGATAATCCCGACTCTGGTGATCTT 1599 Query 1607 GTTCTCAGGACGGCCTATGTTTCTTGAGCCGCAAG-TTCTTGAAAAGGCAGAGGCGCTGG 1665 | |||||||||| ||| || |||| |||||| | | ||||||||||| ||||||| |||| Sbjct 1600 GATCTCAGGACGACCTGTGGTTCTGGAGCCG-ACGGTTCTTGAAAAGACAGAGGCTCTGG 1658 Query 1666 TCGCTGCTTGGCTGCCTGGTACAGAAGGGCAAGGGATTGCTGATGTAATATTCGGAGATT 1725 ||||||||||||||||||| ||||||||||||||||| ||||| || || || ||||||| Sbjct 1659 TCGCTGCTTGGCTGCCTGGAACAGAAGGGCAAGGGATGGCTGACGTTATTTTTGGAGATT 1718 Query 1726 ATGACTTCCGAGGG-AAGTTACCAGCAACATGGTTCAAACGTGTAGACCAGTTACCTCTT 1784 |||||||| |||| |||||||||| | |||||||||||||| || || || || || Sbjct 1719 ATGACTTCA-AGGGGAAGTTACCAGTGAGTTGGTTCAAACGTGTTGAGCATTTGCCACTA 1777 Query 1785 GA--CATC-GAATCAAATGGGTATTTGCCATTGTTTCCTCTTGGTTTTGGTCTCAAT 1838 || | || || ||| | | ||| |||||||| ||| ||||||| ||||||||| Sbjct 1778 GATGC-TCAGAC-CAATTCG-TATGACCCATTGTTCCCTTTTGGTTTCGGTCTCAAT 1831 > Ahg323329 jgi|Araly1|323329|fgenesh1_pm.C_scaffold_5000873 Length=1821 Score = 1445 bits (782), Expect = 0.0 Identities = 1479/1811 (82%), Gaps = 65/1811 (4%) Strand=Plus/Plus Query 57 GTTTACAAGAACCGG-GAAGCGCCAGTGGAGGCGCGTGTAAAGGACCTTCTCTCTCGGAT 115 ||||||||||| ||| || |||||||||||||||||||||||||||||||||||||| || Sbjct 28 GTTTACAAGAA-CGGAGACGCGCCAGTGGAGGCGCGTGTAAAGGACCTTCTCTCTCGCAT 86 Query 116 GACTCTGGCTGAAAAAATCGGCCAGATGACTTTGATCGAACG-TAGCGTCGCTTCTGAGG 174 |||| || | || || || || ||||||||| ||| ||||| | |||||||||| Sbjct 87 GACTTTGCCGGAGAAGATTGGTCAGATGACTCAGATAGAACGCTC-CGTCGCTTCTCCT- 144 Query 175 CC-GTGATAAGAGATT-TCTCCATCGGTAGTGTATTGAACCGCGCAGGAGGTTGGCCATT 232 | || || | | ||| | || ||||| |||||| || | |||| ||| ||||||| || Sbjct 145 CAAGTCATTACACATTCTTTC-ATCGGCAGTGTACAGAGCGGCGCCGGAAGTTGGCCGTT 203 Query 233 TGAGGATGC-AAAGTCGTCGAATTGGGCGGATATGATCGACGGCTTCCAGCGATCAGCGT 291 ||| | || ||| || ||| |||||||||||||||||||| | || ||||| ||||||| Sbjct 204 CGAGAACGCCAAA-TCATCGGATTGGGCGGATATGATCGACAGTTTTCAGCGTTCAGCGT 262 Query 292 TAGAGTCGCGTTTGGGAATTCCGATAATTTACGGCATTGACGCTGTTCATGGCAACAATG 351 ||| |||||||||||||||||||||||| ||||||| |||||| |||||||||||||| Sbjct 263 TAGCGTCGCGTTTGGGAATTCCGATAATATACGGCACTGACGCCGTTCATGGCAACAACA 322 Query 352 ACGTCTACGGCGCCACCATCTTTCCCCACAATATTGGTCTCGGCGCCACTAGAGACGCGG 411 |||||||||| ||||| |||| |||||||| ||||||||||| || || |||||||| | Sbjct 323 ACGTCTACGGTGCCACTGTCTTCCCCCACAACATTGGTCTCGGAGCTACCAGAGACGCCG 382 Query 412 ATTTGGTCAAAAGAATTGGAGCTGCAACAGCACTTGAAGTAAGGGCGT-GCGGTGCTCAC 470 |||| || | ||||||||| |||||||||||||||||||||||||| | | |||| |||| Sbjct 383 ATTTAGTTAGAAGAATTGGTGCTGCAACAGCACTTGAAGTAAGGGC-TAGTGGTGTTCAC 441 Query 471 TGGGCGTTTGCTCCTTGCGTCGCAGTGGTGAAAGATCCGAGATGGGGAAGATGCTATGAG 530 ||| | ||||||||||| || || || || |||||| || |||||| ||||||||||| Sbjct 442 TGGACATTTGCTCCTTGTGTGGCTGTTTTGGGAGATCCAAGGTGGGGACGATGCTATGAG 501 Query 531 AGCTATGGTGAAGTTGCTCAAATTGTTTCTGAGATGACTTCACTTGTCTCGGGTCTACAA 590 || |||||||||| |||| ||||||||| |||||||| ||| ||| ||||||| |||||| Sbjct 502 AGTTATGGTGAAGCTGCTAAAATTGTTTGTGAGATGAGTTCGCTTATCTCGGGCCTACAA 561 Query 591 GGGGAGCCATCCAAAGACCACACAAATGGTTACCCTTTTCTTGCAGGAAGAAAAAACGTG 650 || |||||| || |||| ||| | || |||||||||||||||||||||||||| |||||| Sbjct 562 GGCGAGCCACCCGAAGAACACCCTAACGGTTACCCTTTTCTTGCAGGAAGAAACAACGTG 621 Query 651 GTTGCGTGTGCCAAGCACTTTGTTGGAGATGGTGGTACCAATAAGGCCATAAATGAAGGA 710 || |||||||| || |||||||||||||||||||||||| |||||| | ||| || || Sbjct 622 GTCGCGTGTGCTAAACACTTTGTTGGAGATGGTGGTACCGATAAGGGCTTAAGCGAGGGG 681 Query 711 AACACCATTT--TGCGGTACGAAGACTTGGAGAGAAAA-CACATTGCTCCCTATAAGAAG 767 |||||||| | | || ||||||||||||| ||| || ||||||||||| || Sbjct 682 AACACCATAGCAT-CA-TATGAAGACTTGGAGA-AAATTCATGTTGCTCCCTATCTTAAT 738 Query 768 TGTATTTCTCAAGGAGTCTCTACCGTTATGGCCTCTTACTCCAGTTGGAACGGA-GATAA 826 |||||| |||| ||||| | ||||||||||||||||| ||||||||||||| | | || Sbjct 739 TGTATTGCTCAGGGAGTGTGTACCGTTATGGCCTCTTTTTCCAGTTGGAACGAAAG-TAG 797 Query 827 ACTTCACTCAC-ACTACTTCCTCTTAACGGAAATTCTCAAACAAAAACTTGGTTTCAAGG 885 ||| ||||| | |||| |||||||| |||||| ||||||| || ||||| ||||| |||| Sbjct 798 ACTCCACTC-CGACTATTTCCTCTTGACGGAAGTTCTCAAGCAGAAACTCGGTTTTAAGG 856 Query 886 G-TTATGTAGTTTCGGACTGGGAAGGTTTGGAC-CGGCTTAGCGACCCACCAGGTTCAAA 943 | || | ||||||| |||||||| |||||||| || ||||||| ||| ||||||||| Sbjct 857 GATT-TCTAGTTTCAGACTGGGATGGTTTGGAGACGA-TTAGCGAGCCAGAAGGTTCAAA 914 Query 944 CTACCGCAACTGCGTCAAAATAGGGATTAATGCTGGAATCGATATGGTGATGGTACCTTT 1003 |||||| |||||| ||||| | |||||||||||||| ||||| ||||||||||||||||| Sbjct 915 CTACCGTAACTGCATCAAACTCGGGATTAATGCTGGGATCGACATGGTGATGGTACCTTT 974 Query 1004 CAAGTATGAACAGTTTAGAAATGACTTGATAGATCTAGTGGAGTCAGGGGAAGTATCGAT 1063 |||||| |||||||| | | | ||| ||| |||||| ||||||||||| ||| || |||| Sbjct 975 CAAGTACGAACAGTTCATACAGGACATGACAGATCTTGTGGAGTCAGGAGAAATACCGAT 1034 Query 1064 GGCTCGTGTTAATGACGCTGTTGAAAGAATACTTAGAGTAAAGTTTGTTGCAGGACTCTT 1123 |||||| || ||||| |||||||| |||||||||||||| ||||||||||| || ||||| Sbjct 1035 GGCTCGGGTCAATGATGCTGTTGAGAGAATACTTAGAGTGAAGTTTGTTGCGGGTCTCTT 1094 Query 1124 CGAATTTCCTCT-TACAGATCGATCTTTGTTACCTACTGTTGGTTGCAAGGAACATAGAG 1182 ||| |||| | | | || ||||||||||| |||||||| |||||| | ||| Sbjct 1095 TGAACATCCTTTCT-CGGACCGATCTTTGTTGGGAACTGTTGGCTGCAAG-A-----GAG 1147 Query 1183 AGTTGGCGCGTGAAGCGGTTAGAAAGTCGTTAGTTCTGCTAAAGAACGGCAGATATGG-A 1241 | | | ||||||||||||||||||||||||||| |||| ||||| || | | ||| | Sbjct 1148 --TAG-CACGTGAAGCGGTTAGAAAGTCGTTAGTTTTGCTTAAGAATGGTAAAAATGCTA 1204 Query 1242 G-A-A---TTTCTGCCATTAAATTGCAATGCCGAGAGAATTCTAGTGGTTGGAACGCATG 1296 | | ||||||||| || | | ||||| |||| |||||||| ||||||| ||||| Sbjct 1205 ATACACCATTTCTGCCACTAGACCGTAATGCAAAGAGGATTCTAGTTGTTGGAATGCATG 1264 Query 1297 CAGATGATCTTGGATATCAATGCGGTGGATGGACAAAGACAATGTATGGTCAAAGCGGAA 1356 || | ||||||||| |||| || || |||||||||||||||| | |||||||||||| | Sbjct 1265 CAAACGATCTTGGAAATCAGTGTGGAGGATGGACAAAGACAAAATCTGGTCAAAGCGGCA 1324 Query 1357 GGATCACAGAT-GGCACAACGCTTTTAGATGCCATAAAAGCGGCAGTTGGAGACGAAACC 1415 | |||||| || ||||| |||||||| |||||||||||||| |||||||||||| ||||| Sbjct 1325 GAATCACA-ATTGGCACGACGCTTTTGGATGCCATAAAAGCAGCAGTTGGAGACAAAACC 1383 Query 1416 GAAGTGATCTATGAGAAAAGTCCATCAGAGGAAACCTTAGCCTC-AG-GATATAGATTTT 1473 ||||||||||| ||||||| |||| || | |||||||||||||| || || | | || | Sbjct 1384 GAAGTGATCTACGAGAAAACTCCAACAAAAGAAACCTTAGCCTCGAGTGA-AG-GCTTCT 1441 Query 1474 CTTATGCAATTGTTGCGGTGGGAGAATCGCCCTATGCAGAGACT-ATGGGGGATAATTCA 1532 | || || || ||||| ||||| || | ||||| ||||||| | | ||| ||||| || Sbjct 1442 CCTACGCTATCGTTGCAGTGGGGGAGCCTCCCTACGCAGAGA-TGAAGGGCGATAACTCG 1500 Query 1533 GAACTCGTAATACCTTTCAATG-GTAGCGAGATTATAACCACGGTTGCAGAGAAAATACC 1591 |||||| |||||||||||| | ||| | | ||||||||| |||||||||||||||| || Sbjct 1501 GAACTCACAATACCTTTCAA-GAGTAACAACATTATAACCGCGGTTGCAGAGAAAATCCC 1559 Query 1592 GACTCTAGTGATCTTGTTCTCAGGACGGCCTATGTTTCTTG-AGCCGCAA-G-TTCTTGA 1648 ||||||||||||||| ||||||||||| |||||| || ||| |||| || | ||||||| Sbjct 1560 GACTCTAGTGATCTTATTCTCAGGACGTCCTATGGTT-TTGGAGCC--AACGGTTCTTGA 1616 Query 1649 AAAGGCAGAGGCGCTGGTCGCTGCTTGGCTGCCTGGTACAGAAGGGCAAGGGATTGCTGA 1708 |||| | ||||| |||||||||||||| | ||||| || ||||||||||||||| |||| Sbjct 1617 AAAGACCGAGGCTTTGGTCGCTGCTTGGTTCCCTGGAACCGAAGGGCAAGGGATTACTGA 1676 Query 1709 TGTAATATTCGGAGATTATGACTTCCGAGGGAAGTTACCAGCAA-CATGGTTCAAACGTG 1767 ||| || || ||| ||||||||||| |||||||||||||| | | ||||||||||| | Sbjct 1677 TGTCATTTTTGGAAATTATGACTTCAAAGGGAAGTTACCAGTGAGC-TGGTTCAAACGCG 1735 Query 1768 TAGACCAGTTACCTCTTGACA-TCGAAT-CAAATGGGTATTTGCCATTGTTTCCTCTTGG 1825 |||||||||| || || || | || | | || |||| |||||||||||| |||| Sbjct 1736 TAGACCAGTTGCCGCTAAACGCT-GA-TGCCGATTCGTATGACCCATTGTTTCCTATTGG 1793 Query 1826 TTTTGGTCTCA 1836 ||| ||||||| Sbjct 1794 TTTCGGTCTCA 1804 > Ahg485080 jgi|Araly1|485080|fgenesh2_kg.5__1072__AT3G47040.1 Length=1791 Score = 763 bits (413), Expect = 0.0 Identities = 799/981 (81%), Gaps = 44/981 (4%) Strand=Plus/Plus Query 882 AAGGG-TTATGT-AGTTTCGGACTGGGAAGGTTTGGACCGGCTTAGCGACCCA-CCAGGT 938 ||||| || ||| | |||| |||||||||| |||||| |||||||| || ||| | ||| Sbjct 781 AAGGGATT-TGTCA-TTTCTGACTGGGAAGCTTTGGAACGGCTTAGTGAGCCATTC-GGT 837 Query 939 TCAAACTACCGCAACTGCGTCAAAATAGGGA-TTAATGCTGGAATCGATATGGTGATGGT 997 || ||||||||||||||||| |||| | ||||||||||| |||| ||||||||||| Sbjct 838 TCTAACTACCGCAACTGCGTGAAAA-CCTCAGTTAATGCTGGAGTCGACATGGTGATGGT 896 Query 998 ACCTTTCAAGTATGAACAGTTTAGAAATGACTTGATAGATCTAGTGGAGTCAGGGGAAGT 1057 |||||||||||||||||||||| ||| ||| | | |||||| ||||||||||||||||| Sbjct 897 GCCTTTCAAGTATGAACAGTTTATAAAGGACCTCACAGATCTGGTGGAGTCAGGGGAAGT 956 Query 1058 ATCGATGGCTCGTGTTA-ATGACGCTGTTGAAAGAATACTTAGAGTAAAGTTTGTTGCAG 1116 | | ||| |||| | || |||| |||||||| |||||||||||||| ||||||||||| | Sbjct 957 AACAATGTCTCG-GATAGATGATGCTGTTGAGAGAATACTTAGAGTGAAGTTTGTTGCGG 1015 Query 1117 GACTCTTCGAATTTCCTCTTACAGATCGATCTTTGTTACCTACTGTTGGTTGCAAGGAAC 1176 | || || ||| |||||| || || |||||||| || ||||||||| |||||||||| Sbjct 1016 GTCTTTTTGAAAATCCTCTGACGGACCGATCTTTATTGGGTACTGTTGGCTGCAAGGAAC 1075 Query 1177 ATAGAGAGTTGGCGCGTGAAGCGGTTAGAAAGTCGTTAGTTCTGCTAAAGAA-CG-GCAG 1234 ||||||| | || |||||| ||||||||||||||||||| || || ||||| || | Sbjct 1076 ATAGAGAACTAGCTCGTGAATCGGTTAGAAAGTCGTTAGTGCTCCTGAAGAACCGAAAAA 1135 Query 1235 A-TATG-G-AG-AATTTCTGCCATTAAATTGCAATGCCGAGAGAATTCTAGTGGTTGGAA 1290 | | || | || |||||||||| || || | || ||| ||||||||||||| ||||| Sbjct 1136 ATTCTGAGAAGCCATTTCTGCCACTAGATCGTAACGCCAAGAGAATTCTAGTCACTGGAA 1195 Query 1291 CGCATGCAGATGATCTTGGATATCAATGCGGTGGATGGACAAAGACAAT-GTAT-GGTCA 1348 |||| | || |||||||||||||| ||||| |||||||||||| | || || | |||| Sbjct 1196 CGCACACGGACGATCTTGGATATCAGTGCGGGGGATGGACAAAGGC-ATGGT-TCGGTCT 1253 Query 1349 AAGCGGAAGGATCACAGAT-GGCACAACGCTTTTAGATGCCATAAAAGCGGCAGTTGGAG 1407 |||||| ||||||||| || |||||||||||||| || ||||| |||| |||||||||| Sbjct 1254 AAGCGGCAGGATCACA-ATCGGCACAACGCTTTTGGACGCCATTAAAGAAGCAGTTGGAG 1312 Query 1408 ACGAA-ACCGAAGTGATCTATGAGAAAAGTCCATCAGAGGAAACCTTAGCCTCAGGAT-- 1464 || || || ||||||||||| ||||| | ||| || || ||||| |||||||| || | Sbjct 1313 AC-AAGACTGAAGTGATCTACGAGAAGACTCCTTCCGAAGAAACTTTAGCCTC-GG-TGC 1369 Query 1465 ATA-GATTTTCTTATGCAATTGTTGCGGTGGGAGAATCGCCCTATGCAGAGACTA-TGGG 1522 | | | || || || || |||||||| ||||| ||| | ||||| |||||||| | |||| Sbjct 1370 A-AGGCTTCTCCTACGCCATTGTTGCAGTGGGGGAAACTCCCTACGCAGAGAC-ATTGGG 1427 Query 1523 GGATAATTCAGAACTCGTAATACCTTTCAATGGTAGCGAGATTATAACCACGGTTGCAGA 1582 ||||| || |||||| |||||| || || |||| ||| ||| ||||| |||||||||| Sbjct 1428 AGATAACTCGGAACTCACAATACCCTTAAACGGTAACGACATTGTAACCGCGGTTGCAGA 1487 Query 1583 GAAAATACCGACTCTAG-TGATCTTGTTCTCAGGACGGCCTATGTTTCTTGAGCCGCAAG 1641 |||||| |||||||||| || |||||||||| |||||||||||| |||||||||||| | Sbjct 1488 GAAAATTCCGACTCTAGTTG-TCTTGTTCTCTGGACGGCCTATGGTTCTTGAGCCGCCGG 1546 Query 1642 TTCTTGAAAAGGCAGAGGCGCTGGTCGCTGCTTGGCTGCCTGGTACAGAAGGGCAAGGGA 1701 ||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||| | Sbjct 1547 TTCTTGAAAAGGCTGAGGCTCTGGTCGCTGCTTGGCTGCCTGGAACCGAAGGGCAAGGAA 1606 Query 1702 TT-GCTGATGTAATATTCGGAGATTATGACTTCCGAGGG-AAGTTACCAGCAA-CATGGT 1758 | | |||||| || || |||||||||||||| ||||| |||||||||| | | |||| Sbjct 1607 TGAG-TGATGTCATTTTTGGAGATTATGACTTT-GAGGGGAAGTTACCAGTGAGC-TGGT 1663 Query 1759 TCAAACGTGTAGACCAGTTACCTCTTGACATC-GAATCAAATGGGTATT-TGCCATTGTT 1816 |||||| || |||||||| || || || | ||| | ||| |||| | |||||||| Sbjct 1664 TCAAACACGTTGACCAGTTGCCG-TTAACCGCTGAAGCCAATTCGTATGAT-CCATTGTT 1721 Query 1817 TCCTCTTGGTTTTGGTCTCAA 1837 ||||||||||||||||||||| Sbjct 1722 TCCTCTTGGTTTTGGTCTCAA 1742 Score = 316 bits (171), Expect = 3e-85 Identities = 293/352 (83%), Gaps = 8/352 (2%) Strand=Plus/Plus Query 57 GTTTACAAGAACCGGGAAGCGCCAGTGGAGGCGCGTGTAAAGGACCTTCTCTCTCGGATG 116 ||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||| Sbjct 25 GTTTACAAGAACCAAGACGCGCCAGTGGAGGCGCGTGTAAAGGACCTTCTCTCTCGCATG 84 Query 117 ACTCTGGCTGAAAAAATCGGCCAGATGACTTTGATCGAACGTAG-CGTCGCTTCTGAGGC 175 |||||| | ||||| || |||||||||||| ||||||||| | |||| || || | | Sbjct 85 ACTCTGCCGGAAAAGATAGGCCAGATGACTCAGATCGAACGC-GTCGTCACTACTCATCC 143 Query 176 CGTGATAAGAGATTTCTCCATCGGTAGTGTATTGAACCGCGCAGGAGGTTGGCCATTTGA 235 ||| || | ||||| || ||||||||||||| ||||| | | |||| ||||||| || || Sbjct 144 CGTCATTACAGATTACTTCATCGGTAGTGTACTGAACGGTGGAGGAAGTTGGCCGTTCGA 203 Query 236 GGATGCAAAGTCGTCGAATTGGGCGGATATGATCGACGGCTT-CCAG--CGATCAGCGTT 292 |||||| ||| ||||| ||||||| |||||||||||||| || ||| || ||||||| Sbjct 204 GGATGCTAAGACGTCGGATTGGGCTGATATGATCGACGG-TTACCAAAACG--CAGCGTT 260 Query 293 AGAGTCGCGTTTGGGAATTCCGATAATTTACGGCATTGACGCTGTTCATGGCAACAATGA 352 || |||||| || ||||||||||| || || |||||||| ||||| ||||||||||| | Sbjct 261 AGCGTCGCGCTTAGGAATTCCGATCATCTATGGCATTGATGCTGTCCATGGCAACAACAA 320 Query 353 CGTCTACGGCGCCACCATCTTTCCCCACAATATTGGTCTCGGCGCCACTAGA 404 |||||||| ||||| |||||||||||||| || || ||||| ||||| ||| Sbjct 321 TGTCTACGGAGCCACTATCTTTCCCCACAACATAGGCCTCGGAGCCACCAGA 372 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 72447645990 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5