BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G48050.1
Length=5482
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485166 jgi|Araly1|485166|fgenesh2_kg.5__1158__AT3G48060.1 7821 0.0
Ahg951082 jgi|Araly1|951082|scaffold_802969.1 1258 0.0
> Ahg485166 jgi|Araly1|485166|fgenesh2_kg.5__1158__AT3G48060.1
Length=5057
Score = 7821 bits (4235), Expect = 0.0
Identities = 4647/4850 (96%), Gaps = 12/4850 (0%)
Strand=Plus/Plus
Query 1 ATGCATGGGAGGGTTTGTGAGCGGAGACACAAAAGTCGTCGTCGGCACATGTTGATATCT 60
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 109 ATGCATGGGAGGGTTTGTGAGCGGAGGCACAAAAGTCGTCGCCGGCACATGTTGATATCT 168
Query 61 TCCTCTCGTGTAATTGCGACTGTGGAAGGTGGTGGTTCTTCTTGTTTGTCCTTATCTTCA 120
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 169 TCCTCGCGTGTAATTGCGACTGTGGAAGGTGGTGGTTCTTCTTGTTTGTCATTATCTTCA 228
Query 121 TCTACCTCGTTTTCTAAGGACGGGCGCAAAATTAGTGTTGGTGACTGTGCTCTGTTTAAG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 229 TCTACCTCGTTTTCTAAGGACGGGCGCAAAATTAGTGTTGGTGACTGTGCTCTTTTTAAG 288
Query 181 CCACCACAGGATTGTCCACCGTTCATTGGGATAATTCGCTTGATCATTGCTGAGGAAGAA 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 289 CCACCACAGGATTGTCCACCGTTCATTGGGATAATTCGCTTGATCATTGCTGAGAAAGAA 348
Query 241 GATAAGTTGAAGTTGGGTGTTAATTGGCTTTATCGACCCACTGAATTAAAACTTGGCAAA 300
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 349 GATAAGTTGAAGTTGGGTGTTAATTGGCTGTATCGACCCACAGAATTAAAACTTGGCAAA 408
Query 301 GGCATCCTTCTAGAGGCTGAGCCGAACGAACTCTTTTACTCCTTTCACGAGGATAATATA 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 409 GGCATCCTTCTAGAGGCTGAGCCGAACGAACTCTTTTATTCCTTTCACGAGGATAATATA 468
Query 361 CCTGCTGCATCTTTACTGCATCCGTGTAAAGTTGCCTTCCTTCCAAGAGGTGTTGAACTG 420
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 CCTGCTGCATCTCTATTGCATCCGTGTAAAGTTGCCTTCCTTCCAAGAGGTGTTGAACTG 528
Query 421 CCATCTGGTATCAGCTCGTTTGTGTGTCGGCGAGTTTACGACGTTACAAACGAGCGCTTA 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 529 CCATCTGGTATCTGCTCGTTTGTGTGTCGGCGAGTTTACGACGTTACAAACGAGCGCATA 588
Query 481 TGGTGGCTGACTGATCAAGACTATATTGATGATCGACAACTAGAAGTAGACAAGTTATTG 540
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 589 TGGTGGCTGACAGATCAAGACTATATTGATGATCGACAACTAGAAGTAGACAAGTTATTG 648
Query 541 TGTAAGACTCGTTCAGAAATGCATACAACATTACAGCAGGGTGGTCGGTCTCCCAAGTCC 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 649 TGTAAGACTCGTTCAGAAATGCATACAACATTACAGCAGGGTGGTCGTTCTCCCAAGTCC 708
Query 601 ATGAATAGTCCAACAACATCACAACCGAAAGATGGCATCCAGAACAGTAACTCTTTTCTC 660
|||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct 709 ATGAATAGTCCAACAACATCACAAGCGAAAGATGGCATACAGAACAATAACTCTTTTCTT 768
Query 661 TCTCAGGGTAAGGGAAGGAAAAGAGAGCGTATGGATCATGGTTCCGAGTCTGTTAAAAGG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 769 TCTCAGGGTAAGGGAAGGAAAAGAGAGCGTATGGATCATGGTTCCGAGTCTGTTAAACGG 828
Query 721 GAACGTTCTAGTCGAGTAGATGACAGTGGTTCTGGTCCCCTCAGAACAGAAAGCGGTTTA 780
||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 829 GAACGTTCTTCTCGAGTAGATGACAGTGGTTCTGGCCCCCTCAGAACAGAAAGCGGTTTA 888
Query 781 AAGTCTGAAATTTTAAAATTTACAGAGAAAGGTGGTCTGGTGGATTCTGAAGGAGTTGAA 840
|||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 889 AAGTCTGAGATTTCAAAATTTACAGAGAAAGGTGGTCTGGTGGATTCGGAAGGAGTTGAA 948
Query 841 AAATTGGTTCAGCTCATGCTGCCTGAGAGGAATGAAAAGAAAATAGACTTAGTTGGCCGT 900
|||||||| ||||||||||| |||||||||||||| ||||||||||||||| ||||||||
Sbjct 949 AAATTGGTGCAGCTCATGCTACCTGAGAGGAATGAGAAGAAAATAGACTTAATTGGCCGT 1008
Query 901 GCAATTCTTGCAGGGGTTGTAGCGGCAACAGACAAGTTTGATTGCCTTAGTCGTTTTGTC 960
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 GCGATTCTTGCAGGGGTTGTAGCGGCAACAGACAAGTTTGATTGCCTTAGTCGTTTTGTC 1068
Query 961 CAGCTCAGGGGATTACCTGTGTTTGATGAGTGGCTGCAGGAAGTTCATAAAGGGAAAGTT 1020
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1069 CAGCTCAGGGGATTACCCGTGTTTGATGAGTGGCTGCAGGAAGTTCATAAAGGGAAAGTT 1128
Query 1021 GGGGATGGGGGCAGTCCCAAAGACAGTGATAGGTTAGTAGACGATTTCCTCTTAGTCTTA 1080
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1129 GGAGATGGGGGCAGTCCCAAGGACAGTGATAGGTTAGTAGACGATTTCCTCTTAGTCTTA 1188
Query 1081 CTTCGGGCTCTTGATAAGCTACCTGTGAATCTCAACGCGCTACAGACTTGTAACATTGGA 1140
||||| |||||||| ||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 1189 CTTCGTGCTCTTGACAAGCTACCTGTGAATCTCAACGCTCTTCAGACTTGTAACATTGGA 1248
Query 1141 AAGTCTGTTAATCATCTACGCTCACATAAAAATTCAGAGATTGGGAAAAAAGCAAGGAGC 1200
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1249 AAGTCTGTTAATCATCTACGGTCACATAAAAATTCAGAGATTGGGAAAAAAGCAAGGAGC 1308
Query 1201 TTGGTTGACACTTGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAAGTCTGGATCCAAC 1260
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1309 TTGGTTGACACATGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAAGTCTGGATCCAAC 1368
Query 1261 CAGGGTGTTTCCTGGCCTGGAAGACTGAGTCATGGGGGAAGGCATTCAGGTGGTTCCGCG 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 CAGGGTGTTTCCTGGCCTGGAAGACTGAGTCATGGGGGAAGGCATTCAGGTGGTTCCGCG 1428
Query 1321 GAGGCAAACAAGACATCATCATCACACCTACATGCTTCTAAGTCTGTCTCGGTCAAACAA 1380
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 1429 GAGGCAAACAAGACATCATCATCACATTTACATGCTTCTAAGTCAGTCTCGGTCAAACAA 1488
Query 1381 CAGGTGGAAAACAACCTGAAGTGTGTAGCCACGTCGCCAGGCTCCACAAGATCAGCTCCT 1440
||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct 1489 CAGGTGGAAAATAACCTGAAATGTGTAGCCACGTCGCCAGGCTCTACAAGATCAGCCCCA 1548
Query 1441 TCTCCGGGATCAGGTGGTAATGTTTCTAAAGATGGACAGCAGCGAAATGCTGGGGCTGGT 1500
||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1549 TCTCCGGGATCTGGTGGTACTGTTTCTAAAGATGGACAGCAACGAAATGCTGGGGCTGGT 1608
Query 1501 GGTGTATCTGAAGTCCTAGCTGCAGTAAAGGATGAGAAAAGTAGCAGCTCCAGTCAGTCG 1560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1609 GGTGTATCTGAAGTCCTAGCTGCAGTAAAGGATGAGAAAAGTAGCAGCTCCAGTCAGTCC 1668
Query 1561 CACAATAATAGTCAGTCTTGCTCGAGCGAGCATGCTAAAACAGGCAATTTATGTGGAAAA 1620
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1669 CACAATAATAGTCAGTCTTGCTCGAGCGAGCATGCTAAAACAGGCAATTTATGTGGGAAA 1728
Query 1621 GAAGATGCAAGAAGCTCTACTGCTGGTTCAACTTTGAAGAAGTGTTCCGGTGGCTCTTCA 1680
|| |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||
Sbjct 1729 GAGGATGCAAGAAGCTCAACTGCTGGTTCAACTTTGAAGAAGTGCTCTGGTGGCTCTTCA 1788
Query 1681 AGGCATCGGAAGTCAAACAATGTGTTTCAAGGTTCGTCTTCGTCAGCATCCCCTAGGGGA 1740
||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 1789 AGGCATCGGAAATCAAACAATGTGTTTCAAGGTTCATCTTCGTCAGCATCCCCTAGGGAA 1848
Query 1741 GCTGGTTTGAGTAGAAGCTTCTCATCACACAGGAATGTCCCTTCTGAGAAAATTTCTCAA 1800
|||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1849 GCTGGTTTTAGTAGAAGCTTCTCATCGCAAAGGAATGTCCCTTCTGAGAAAATTTCTCAA 1908
Query 1801 TCAAGTTTGACATCTGAAAAGACTCTTGAGGTTCCTCTGACTGAGGGTTCCGGTAATAAA 1860
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1909 TCAAGTTTGACATCTGAAAAAACTCTTGAGGTTCCTCTGACTGAGAGTTCCGGTAATAAA 1968
Query 1861 TTGATTGTGAAGCTGCCGAATCGTGGTCGAAGTCCTGCTCAAAGTGTGAGTGGAGGCTCT 1920
||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1969 TTGATTGTGAAGCTGCCTAATCGGGGTCGCAGTCCTGCTCAAAGTGTGAGTGGAGGCTCT 2028
Query 1921 TTGGAAGACCCTGCACCGGTGAATAGCAGAGTTTCTTCACCTGTGCATGCGGTGAAGCAG 1980
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2029 TTGGAGGACCCTGCGCCGGTGAATAGCAGAGTTTCTTCACCTGTGCATGCGGTGAAGCAG 2088
Query 1981 GAACTATGTGACAATAACGGGAGAGaaaaaaaTCATTCTTATCGACCTAATGTGAGCTCT 2040
||||| ||||||||||| | ||||||||||||||||||||||||| |||| |||||||||
Sbjct 2089 GAACTGTGTGACAATAATGTGAGAGAAAAAAATCATTCTTATCGAGCTAACGTGAGCTCT 2148
Query 2041 GTCTTGAATGCTGAGTCTTGGCAAAGCAATGAATTAAAAGATATTTTGACAGGCTCGCAA 2100
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2149 GTCTTGAATGCCGATTCTTGGCAAAGCAATGAATTAAAAGATATTTTGACAGGCTCGCAA 2208
Query 2101 GAGGCAGCTGGTTCACCAC---TTGTTGCTGGTGATGAGCGCGGAGGGGATCTTAAGGAT 2157
||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||
Sbjct 2209 GAGGCAGCTGGTTCACCACTTGTTGTTGCTGGTGATGAGCGCGGAGGGGCTCTTAAAGAT 2268
Query 2158 TCTGATAAAGCATCTGGGAATGTTAAAGGCACATCTTCCTTAGGAAATGAGTTCAAATCT 2217
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2269 TCTGATAAAGCAGCTGGGAATGTTAAAGGCACATCTTCCTTAGGAAATGAGATCAAATCT 2328
Query 2218 GGAGAGAGGCATGGCGGAACACTCAGTTCGATGAATGCTTTGATTGAAAGTTGTGTCAGA 2277
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2329 GGAGAAAGGCATGGCGGAACACTCAGTTCGATGAATGCTTTGATTGAAAGTTGTGTCAGA 2388
Query 2278 TACTCTGAGACGAATGCCTCTTTGGCTGGTTCGGATGATGTTGGAATGAATCTTCTTGCT 2337
||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2389 TACTCCGAGACAAATGCGTCTTTGGCTGGTTCGGATGATGTTGGAATGAATCTTCTTGCT 2448
Query 2338 AGTGTTGCTGCTGATGAGATGTCTAAATCGCCTGTTGCATCTCCCTCAGTATCTCAGCCT 2397
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2449 AGCGTTGCTGCTGATGAGATGTCTAAATCGCCTGTTGCATCACCCTCAGTATCTCAGCCT 2508
Query 2398 CCAAATTCCGTGATGAATGAAAATTCTACTGTAGGGAACAATACAAAGCTAATGGCTTCG 2457
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2509 CCAAATTCCTTGATGAATGAAAATTCTACTGTAGGGAACAATACAAAGCTAATCGCTTCG 2568
Query 2458 GATGGCTTGCCTCACGAGCAACATCAAGCTGTTTGTACCTCTGTCAGTACTGAGCAAGGT 2517
||||||||||||||||||||||||||||||| | | ||| ||||||||| ||||||||||
Sbjct 2569 GATGGCTTGCCTCACGAGCAACATCAAGCTGCTCGCACCACTGTCAGTAATGAGCAAGGT 2628
Query 2518 GAGCAACATGTTAGCAGTAGTGGCACACAGTTGGAGTCAGAAATAAAAAATGAATCTAAG 2577
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2629 GAGCAACATGTTAGCAGTAGTGGCACACAGTTGGAGTCAGAGATAAAAAATGAGTCTAAG 2688
Query 2578 ACCGGAGATCGTGATAAGAGCTCGAATTCAGACACTGAAGATCTGCAAAGGTTGGTGGAT 2637
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 2689 ACCGGAGATCGTGATAAGATCTCGAATTCAGACACCGAAGATCTGCAAAGGTTGGTGGAT 2748
Query 2638 CAGTGCTTAGAGAGCAATGACAATTCAGATGGTGTTGTTGCTTCGCCTGCTTTACCCACT 2697
||| | |||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 2749 CAGCACCTAGAGAACAATGACAATTCAGATGGTGCCGTTGCTTCGCCTGCTTTGCCCACT 2808
Query 2698 AAAGCCGTTAAGGAAAAGATTTTGAATGATAGTGACTCTGGGGAACTGAAGGATATAAAG 2757
|||||| | ||||||||||||||| |||||||||||||||||||| | ||||||||||||
Sbjct 2809 AAAGCCATCAAGGAAAAGATTTTGGATGATAGTGACTCTGGGGAAGTAAAGGATATAAAG 2868
Query 2758 ACTGATGTTAAATCAGAGGCTGATTGCACATCTGACTCAACGAAAAGAGTAGCAAGCTCA 2817
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 2869 GCTGATGTTAAATCAGAGGCTGATTGCACATCTGACTCAACAAAAAGACTAGCAAGCTCA 2928
Query 2818 ATGCTAACCGAATGTAGAGATGTAAGTAAAAAGGTAGATTCTGTGGCTGTTGAACAGACT 2877
|||||||| |||||||||||||||||| |||||||||||||||| ||||||||||| |||
Sbjct 2929 ATGCTAACTGAATGTAGAGATGTAAGTCAAAAGGTAGATTCTGTTGCTGTTGAACACACT 2988
Query 2878 CCCTTGGAAGGTGTTGATGATGATAAGAAAGAAGAGAAACCCCCAACGGCGTTGAGTTCT 2937
|| ||||| ||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2989 CCTTTGGACCGTG-T--TGATGATAAGAAAGAAGAGAAACCCCCAACGGCGTTGAGTTCT 3045
Query 2938 GAGCTAGTTAAAAAAGTGGAAGAAGATGTACCCGTTTCTTCTGGGATTTCAAG-GGATAT 2996
|||||||||||||||||||||||||||||||| |||||||||||||||||||| || |||
Sbjct 3046 GAGCTAGTTAAAAAAGTGGAAGAAGATGTACCAGTTTCTTCTGGGATTTCAAGCGG-TAT 3104
Query 2997 GGATGCTGTAAGCATTGGTAGACCTATAACTGAAATGGTCAATAATGTTGCGTTTAATCA 3056
|||||| |||||||||| |||||||||||||||||||||||||||| | ||| |||||||
Sbjct 3105 GGATGCAGTAAGCATTGATAGACCTATAACTGAAATGGTCAATAATATAGCGGTTAATCA 3164
Query 3057 TATGGACCAAAAAGATGTAAAGAAGATTAAGCAGGATTGTGAT-ACTTCTGTGGGAGCTA 3115
|| |||||||||||| |||||||||||||||||||||||||| ||| |||||| ||||
Sbjct 3165 TACAGACCAAAAAGATATAAAGAAGATTAAGCAGGATTGTGATGCCTT-TGTGGGTGCTA 3223
Query 3116 TAAAGGATACCTCAGCCGGTTTGGACTCATCTGTAACTAAAGGTAAAGTTGAGCCTGTGG 3175
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3224 TAAAGGATGCCTCAGCCAGTTTGGACTCATCTGTAACTAAAGGTAAAGTTGAGCCTGTGG 3283
Query 3176 AGGGGAATCTGGAAAATAGTGAAGTCAAGGAACGGTACTCAGGATTAAGAGCTACTCCAG 3235
|||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 3284 AGGGGAATCTAGAAAATATTGAAGTCAAGGAACGGTACTCAGGATTAAAAGCTACTCCAG 3343
Query 3236 GATTATCACCTAAAGAAGCTGAGGATCTTGAGAGACCGAATGGGCCTAAAACCAGTGATG 3295
|| ||||||||||||| || ||||||||| |||||||||||||||||||||| |||||||
Sbjct 3344 GAGTATCACCTAAAGATGCAGAGGATCTTAAGAGACCGAATGGGCCTAAAACTAGTGATG 3403
Query 3296 CTGATGGAGATGAAGCGGGGGAATGTACGTCTGCTGCCAGAGATGCTTCTTCTGTTTCAG 3355
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct 3404 CTGATGGAGATGAAGCGGAGGAATGTACGTCTGCTGCCAGAGATGCTTCTTCCGTTTCAG 3463
Query 3356 CTGCAGCTTCAGCTGGCTCTGAGATGGATGCCAGAGTTGAATTTGATCTAAATGAAGGTT 3415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3464 CTGCAGCTTCAGCTGGCTCTGAGATGGATGCCAGAGTTGAATTTGATCTAAATGAAGGTT 3523
Query 3416 TTGATGGAGACGATGCAAAACATGGGGACTCAAATAACTTCTCTGGATCTGTATTTTTGA 3475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3524 TTGATGGAGACGATGCAAAACATGGGGACTCAAATAACTTCTCTGGATCTGTATTTTTGA 3583
Query 3476 CGCCTACTCCTCTACAACCAGTTAAGACCTTACCTTTTCCGGTGGCTCCTGTATCTAGTG 3535
||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct 3584 CGCCTACTCCTCTACAACCAGTTAATACCTTGCCTTTTCCTGTGGCTCCTGTATCTAGTG 3643
Query 3536 GAACTCGTGCATCTATTACTGTTGCTGCTGCTGCCAAAGGTCCGTTTGTTCCACCTGAAG 3595
||| || |||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 3644 GAATTCCTGCATCCATTACTGTTGCTGCTGCTGCCAAAGGTCCGTTTGTTCCACCCGAAG 3703
Query 3596 ATCTGTTGAGAAATAAAGGGGCTGTTGGTTGGAGAGGATCTGCTGCCACTAGTGCCTTCC 3655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3704 ATCTGTTGAGAAATAAAGGGGCTGTTGGTTGGAGAGGATCTGCTGCCACTAGTGCCTTCC 3763
Query 3656 GCCCAGCTGAGCCAAGAAAACCTCAGGATGTGTTACTGAGCATTAACAACACCTCTACAT 3715
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||
Sbjct 3764 GCCCAGCTGAGCCAAGAAAAGCTCAGGATGTGTTACTGAGCATTAACAATACCTCTACAT 3823
Query 3716 CTGATGCATCTACTTCTGCTGGCAAACAGACAAGGACGTTTCTGGATTTTGACTTGAATG 3775
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3824 CTGATGCATCTACATCTGCTGGCAAACAGACAAGGACGTTTCTGGATTTTGACTTGAATG 3883
Query 3776 TACCTGACGAGAGAGTCCTTGAAGATTTGGCTTCCCAAAGATCTGGAAATCCCACAAATT 3835
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 3884 TACCTGACGAGAGAGTCCTTGAAGATTTGGCTTCCCAAAGAACTGGAAATGCCACAAATT 3943
Query 3836 GTACATCTGATATCACCAATAGTTTTGACCAAGTACGTTCTGGGGTCATGGGTTCCGCCC 3895
||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 3944 GTACATCTGGTATCACCAATAGTTTTGACCAAGCACGTTCTGGGGTCATGGGTTCCGCGC 4003
Query 3896 TTGATCATTCTTCTGGAGGCCTTGATCTTGATCTAAACAAAGTTGATGATTCAACTGATA 3955
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 4004 TTGATCATTCTTCTGGGGGCCTTGATCTTGATCTAAACAAAGTTGATGATTCAACTGATA 4063
Query 3956 TGATCAGCTACACA-ATGAACAGTAGTCATCGGCTAGATTCATCTTTTCAGCAGGTTAAA 4014
||| || ||||| | |||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 4064 TGAACAACTACA-ATATGAGCAGTAGTCATCGGCTAGATTCATCTTTTCAGCACGTTAAA 4122
Query 4015 TTACCATCGACTGGTGGTCGTAGAGATTTTGATTTAAATGATGGACCTGTGGGTGATGAT 4074
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4123 TTATCATCGACTGGTGGTCGTAGAGATTTTGATTTAAATGATGGACCTGCGGGTGATGAT 4182
Query 4075 GCAGCTGTTGAGCCATCTATGGTTCTAAATCAACATTCACGAAGTGGCTTGCCATCACAA 4134
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 4183 GCGGCTGTTGAGCCATCTATGGTTCTAAATCAACATTCACGAAGTGGCTTGCCCTCACAA 4242
Query 4135 CCATCTCTCTCTGGAATTCGAGTGAATGGCGAAAACATGGCTAGTTTCTCAACTTGGTTT 4194
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 4243 CCATCTCTCTCTGGAATACGAGTGAATGGCGAAAACATGGCTAGTTTCTCAACTTGGTTT 4302
Query 4195 CCTGCTGCTAACGCTTATTCAGCTGTGAGCATGCCTCCAATTATGCCTGAGAGAGGTGAT 4254
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 4303 CCTGCTGCTAACGCTTATTCAGCAGTGAGCATTCCTCCAATTATGCCTGAGAGAGGTGAT 4362
Query 4255 CAGCCTTTTCCAATGATTGCCACTCGTGGCCCACAGAGAATGTTGGGTCCAACAACTGGT 4314
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 4363 CAGCCTTTTCCAATGATTGCCAATCGTGGACCACAGAGAATGTTGGGTCCAACAACTGGT 4422
Query 4315 GTTTCCTCATTTACCCCTGAAGGGTACAGGGGTCCTGTTTTGTCGTCGTCTCCAGCCATG 4374
|||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 4423 GTTTCCTCATTTGCCCCTGAAGGGTACAGGGGTCCGGTTTTGTCGTCGTCTCCTGCCATG 4482
Query 4375 CCATTTCAGTCCACAACGTTCCAGTATCCTGTCTTTCCTTTTGGAAACAGCTTCCCCGTT 4434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 4483 CCATTTCAGTCCACAACGTTCCAGTATCCTGTCTTTCCTTTTGGAAACAGCTTCCCCATT 4542
Query 4435 ACCTCAGCGAATTTCCCTGGTGCTTCTACAGCACACATGGATTCTTCTTCAAGCGGGAGA 4494
||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 4543 ACCTCAGCGAATTTCTCTGGTGCTTCTACAACACACATGGATTCTTCTTCAAGTGGGAGA 4602
Query 4495 GCTTGCTTCCCCGGTGTCAACTCTCAAATATTGGGTCCTGGAGTTCCAGTTCCGTCTAAT 4554
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 4603 GCTTGCTTCCCCGGTGTGAACTCTCAAATATTGGGTCCTGGAGTACCAGTTCCGTCTAAT 4662
Query 4555 TACCCAAGACCTTATATAGTTGGCCTCCCAAACGGTGGTAGCAATGGCGGTGTTTTGGAC 4614
||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||
Sbjct 4663 TACCCAAGACCTTATATCGTTGGCCTCCCAAATGGTGGTAGCAATGGTGGAGTTTTGGAC 4722
Query 4615 AATGGCGCGAAATGGTTTAGGTCAGGACTTGACTTAAATTCTGGTCCTGGAGGTCATGAA 4674
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4723 AATAGTGCGAAATGGTTTAGGTCAGGACTTGACTTAAATTCTGGTCCTGGAGGTCATGAA 4782
Query 4675 ACAGAGGGAAGAGACGAATCAACACTTGTGGCAAGGCAATTATCCTCATCTGCTTCCTTA 4734
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4783 ACGGAGGGAAGAGACGAATCAACACTTGTGGCAAGGCAATTATCCTCATCTGCTTCCTTA 4842
Query 4735 CCTTTGAAGGAGGATCAAGCAAGAATGTATCAAATGTCAGGTGGTGTTCTGAAGAGGAAA 4794
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4843 CCGTTGAAGGAGGATCAAGCAAGAATGTATCAAATGTCAGGTGGTGTTCTGAAGAGGAAA 4902
Query 4795 GAACCGGAAGGAGGATGGGATGGATATAGGCAGTCCTCATGGCAATAACA 4844
||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 4903 GAACCGGAAGGTGGATGGGATGGATATAGGCAATCCTCATGGCAATAACA 4952
Score = 158 bits (85), Expect = 5e-37
Identities = 98/104 (94%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 5153 AACACACTTTTAGGTCATTTTTCATGCATGTGTGTATCTCTATACACCGGCTCAAAAAAC 5212
|||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 4955 AACACA-TTTTTGGTCATTTTTCATGCATGTGTGTATCTCTATACACCGGCACAAAAGAC 5013
Query 5213 TAGCGATAAAACAAATGTTGGTGGCTTTTGAGTGTGTTCAAAAT 5256
||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 5014 TAGAGATAAAACGAATGTTGGTGGCTTTTGAGTGTGTTCAAAAT 5057
> Ahg951082 jgi|Araly1|951082|scaffold_802969.1
Length=4834
Score = 1258 bits (681), Expect = 0.0
Identities = 1252/1521 (82%), Gaps = 65/1521 (4%)
Strand=Plus/Plus
Query 15 TTG-TGAGCGG-AGACACAAAAGTCGTCGTCGGCACATGTTGATATCTTCC-TCTCGTGT 71
||| |||| || ||| | ||| ||| |||||||| ||||| | | | ||| ||||||||
Sbjct 43 TTGATGAGAGGAAGA-AGAAAGGTCATCGTCGGCTTATGTTTAGA-CCTCCTTCTCGTGT 100
Query 72 AATTGCGA-CTGTGGAAGGTGGTGGTTCTTCTTGTTTGTCC-TTATCTTCATCTACCTCG 129
|||| ||| | || | | | | ||||||| | | | ||| || ||||| ||||| ||
Sbjct 101 AATTTCGAGC-GTCCACGCTTCTTGTTCTTCGTCTCTCTCCATT-TCTTCTTCTACTTCC 158
Query 130 TTTTCTAAGGACGGGCGCAAAATTAGTGTTGGTGACTGTGCTCTGTTTAAGCCACCACAG 189
|||||||||||||| |||| ||||||||||||||||| |||||| ||||| ||||| |||
Sbjct 159 TTTTCTAAGGACGGACGCAGAATTAGTGTTGGTGACTCTGCTCTCTTTAAACCACCGCAG 218
Query 190 GATTGTCCACCGTTCATTGGGATAATTCGCTTGATCATTGCTGAGGAAGAAGATAAGTTG 249
||||| |||||||| ||||| | ||||||||| ||||| ||||| |||||| |||||
Sbjct 219 GATTGCCCACCGTTTATTGGTTTGATTCGCTTGGTCATTCCTGAGAAAGAAGGCAAGTTT 278
Query 250 AAGTTGGGTGTTAATTGGCTTTATCGACCCACTGAATTAAAACTTGGCAAAGGCATCCTT 309
||| || |||| |||||||| |||||||| | ||||| || ||||||||||||||||||
Sbjct 279 AAGCTGCGTGTGAATTGGCTGTATCGACCTGCGGAATTGAAGCTTGGCAAAGGCATCCTT 338
Query 310 CTAGAGGCTGAGCCGAACGAACTCTTTTACTCCTTTCACGAGGATAATATACCTGCTGCA 369
| |||||| |||| |||||| ||||||| ||||||||||||||| | ||||| ||||||
Sbjct 339 TTGGAGGCTCAGCCTAACGAAATCTTTTATTCCTTTCACGAGGATGAGATACCGGCTGCA 398
Query 370 TCTTTACTGCATCCGTGTAAAGTTGCCTTCCTTCCAAGAGGTGTTGAACTGCCATCTGGT 429
|| ||| ||||||||||||||||| |||| ||||||||||| |||||| ||||||||||
Sbjct 399 TCCTTATTGCATCCGTGTAAAGTTACCTTTCTTCCAAGAGGCGTTGAATTGCCATCTGG- 457
Query 430 A-TCAGC-TCGTTTGTGTGTCGGCGAGTTTACGACGTTACAAACGAGCGC-TTATGGTGG 486
| || | || || |||||| |||||||||| || |||| || || || || ||||||
Sbjct 458 AGTC-TCTTCATTCGTGTGTTGGCGAGTTTATGATGTTATGAATGATTGCATT-TGGTGG 515
Query 487 CTGACTGATCAAGACTATATTGATGATCGACAACTAGAAGTAGACAAGTTATTGTGTAAG 546
|||||||||||| ||||||| ||||| || |||| ||||||||| |||||||||||||||
Sbjct 516 CTGACTGATCAAAACTATATAGATGAACGGCAACAAGAAGTAGATAAGTTATTGTGTAAG 575
Query 547 ACTCGTTCAGAAATGCATACAACATTACAGCAGGGTGGTCGGTCTCCCAAGTCCATGAAT 606
||||| || || |||||||| ||| | | ||||||||||| ||| || || ||||||
Sbjct 576 ACTCGCTCCGAGATGCATACCACACT--A-CAGGGTGGTCGTTCT-CCTAG--GATGAAT 629
Query 607 AGTCCAACAACATCACAACCG-AA--------AGATGGCATCCAGAACAGTAACT-CTTT 656
||||| |||||||| ||| | || ||||||||| ||||||||||||| ||||
Sbjct 630 AGTCCGACAACATCGCAAGTGAAAGCTGGGGCAGATGGCATGCAGAACAGTAACTCCTTT 689
Query 657 TCTCTCTCAGGGTAAGGGAAGGAAAAGAGAGCGT-ATGGATCATGGTTCCGAGTCTGTTA 715
||| || ||||||||||||||||| ||||||||| | ||||| |||||||| ||||| |
Sbjct 690 TCT-TCACAGGGTAAGGGAAGGAAGAGAGAGCGTGCT-GATCAGGGTTCCGAATCTGTGA 747
Query 716 AAAGGGAACGTTCTAGTCGAGTAGATGACAGTGGTTCTGGTCCCCTCAGAACAGAAAGCG 775
|| |||||||| | ||||| || ||||| |||||||||||| ||| ||||||||||||
Sbjct 748 AACGGGAACGTCCAAGTCGGGTTGATGATAGTGGTTCTGGTTTCCTAAGAACAGAAAGCA 807
Query 776 GTTT-AAAGTCTGAAATT-TTAAAATTTACAGAGAAAGGTGGTCTGGTGGATTCTGAAGG 833
|||| ||| ||||| ||| ||||| ||||||| ||||| || || || || ||||| ||
Sbjct 808 GTTTGAAA-TCTGAGATTGCTAAAA-TTACAGAAAAAGGCGGGCTAGTTGACTCTGATGG 865
Query 834 AGTTGAAAAATTGGTTCAGCTCATGCTGCCTGAGAGGAATGAAAAGAAAATAGACTTAGT 893
||||| | |||||| |||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct 866 GGTTGAGAGATTGGTGCAGCTCATGCTGCCTGAGAGAAATGAGAAGAAAATAGACTTGGT 925
Query 894 TGGCCG-TGCAATTCTTGCAGGGGTTGTAGCGGCAACAGACAAGTTTGATTGCCTTAGTC 952
| |||| | ||||||||||||| |||||||| ||||||||||||||||||||||| ||||
Sbjct 926 TTGCCGAT-CAATTCTTGCAGGTGTTGTAGCAGCAACAGACAAGTTTGATTGCCTCAGTC 984
Query 953 GTTTTGTCCAGCTCAGGGGATTACCTGTGTTTGATGAGTGGCTGCAGGAAGTTCATAAAG 1012
|||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct 985 GTTTTGTCCAGCTCAGGGGATTACCTGTTTTTGATGAGTGGCTACAGGAAATTCATAAAG 1044
Query 1013 GGAAAGTTGGGGATGGGGGCAGTCCCAAAGACAGTGATAGGTTAGTAGACGATTTCCTCT 1072
||||| ||||||||| | ||||||||||||| | |||||| | ||| |||||||| ||||
Sbjct 1045 GGAAAATTGGGGATGCGAGCAGTCCCAAAGATAATGATAGATCAGTGGACGATTTTCTCT 1104
Query 1073 TAG-TCTTACTTCGGGCTCTTGATAAGCTACCTGTGAATCTCAACGCGCTACAGACTTGT 1131
| | |||||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1105 T-GATCTTACTTCGTGCTCTTGATAAGCTACCTGTGAATCTCAATGCTCTACAGACTTGT 1163
Query 1132 AACATTGGAAAGTCTGTTAATCATCTACGCTCACATAAAAATTCAGAGATTGGGAAAAAA 1191
||||| |||||||||||||| ||| | || |||||||| || ||||| |||||||||||
Sbjct 1164 AACATAGGAAAGTCTGTTAACCATTTGCGATCACATAAGAACTCAGAAATTGGGAAAAAG 1223
Query 1192 GCAAGGAGCTTGGTTGACACTTGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAAGTCT 1251
||||||||||||||||| || ||||||||||| |||||||||||||||||||| ||||||
Sbjct 1224 GCAAGGAGCTTGGTTGATACGTGGAAGAAACGTGTTGAGGCAGAAATGGATGCAAAGTCT 1283
Query 1252 GGATCCAACCAGGGTGTTTCCTGGCCTGGAAGAC-T-G--AGTC--A--T-------GGG 1296
|||||||| |||||| || ||||||||||||| | | |||| | | |||
Sbjct 1284 GGATCCAATCAGGGTACATCTTGGCCTGGAAGACCTCGTCAGTCTGAAGTTTCTCATGGG 1343
Query 1297 GGAAGGCATTCAGGTGGT-TCCGCGGAGGCAAACAA-GACATCATCATCACACCTACATG 1354
|| || |||||||||| | || || || |||| ||| ||||||| ||||||| ||||||
Sbjct 1344 GGTAGACATTCAGGTG-TATCTGCTGATGCAA-CAAAGACATCAACATCACATCTACATC 1401
Query 1355 CTTCTAAGTCTGTCTCGGTCAAACA-ACAGGTG-GAAAACAACCTGAAGTGTGTAGCCAC 1412
|||||||||| || || |||||| | || | | ||||||| | |||||| || | | ||
Sbjct 1402 CTTCTAAGTCCGTGTCCGTCAAA-ATACCG-TCAGAAAACAGCATGAAGTCTGCAACTAC 1459
Query 1413 GTCGCCAGGCTCCACAAGATCAGCTCCTTCTCCGGGATCAGGTGGTAATGTTTCTAAAGA 1472
|| ||| | || || |||||||| || || || ||| |||||| | ||| |||| ||
Sbjct 1460 ATCTCCAAGTTCTACTAGATCAGCCCCATCACCTGGAACAGGTGTTTCGGTTGCTAATGA 1519
Query 1473 TGGACAGCAGCGAAATGCTGG 1493
||| ||||| ||||| ||||
Sbjct 1520 TGGGCAGCAAAGAAATACTGG 1540
Score = 675 bits (365), Expect = 0.0
Identities = 786/983 (80%), Gaps = 54/983 (5%)
Strand=Plus/Plus
Query 3902 ATTCTTCTGGAGGCCTTGATCTTGATCTAAACAAAGTTGATGATTCAACTGATATG-ATC 3960
|||| ||||| ||||| |||||||||||||||||| |||||||| | ||||||||| ||
Sbjct 3877 ATTCCTCTGGTGGCCTGGATCTTGATCTAAACAAACTTGATGATCCGACTGATATGAAT- 3935
Query 3961 AGCTACACAATGAA-CAGTAGTCATCGGCTAGATTCATCTTTTCAGCAGGTTAAATTACC 4019
| |||||||| || ||| |||||||| |||| ||||||||||| || | || | |
Sbjct 3936 AATTACACAAT-AAGCAGCGGTCATCGGGTAGACTCATCTTTTCAACAAG--CAA--A-C 3989
Query 4020 ATCGACTGGTGGTCGTAGAGATTTTGATTTAAATGATGGACCTG-TGGGTGATGATGC-A 4077
| |||||||||||||||||||||||||||| |||||||| | || ||||||| | |
Sbjct 3990 -TTTTCTGGTGGTCGTAGAGATTTTGATTTAAACGATGGACCCGCTGT-TGATGATTCGA 4047
Query 4078 GCTGTTGAGCCATCTATGGTTCTAAATCAACATTCACGAAGTGGCTTGCCATCACAACCA 4137
| ||||||| ||||||||||| | | ||||||||| |||| ||||||| ||||||| |||
Sbjct 4048 G-TGTTGAGTCATCTATGGTTTTTACTCAACATTCCCGAAATGGCTTGACATCACAGCCA 4106
Query 4138 -TCTCTCTCTGGAATTCGAGTGAATGGCGAAAACATGGCTAG-T---TTCTCAACTTGGT 4192
| |||||||||| || ||||||| ||| ||||||| || | |||||| ||||||
Sbjct 4107 ATGA-TCTCTGGAATAAGAATGAATGGTGAACACATGGC-AGCTGGCTTCTCATCTTGGT 4164
Query 4193 TTCCTGCTGCTAACGCTTATTCAGCTGTGAGCATGCCTCCAATTAT-GCCTGAGAGAGGT 4251
|||||||||||||| ||||||||| |||| || |||| || | | |||||| ||||
Sbjct 4165 TTCCTGCTGCTAACAATTATTCAGCAATGAGTATTCCTC-AAGTCTTGCCTGATCGAGGC 4223
Query 4252 GATCAGCCTTTTCCAATGATTGCCA-CTCGTGGCCCACAGAGAATGTTGGGTCCAACAAC 4310
||||| ||||||||| | ||| | | | ||| |||||||| ||| ||||||||||| |
Sbjct 4224 GATCACCCTTTTCCAGTTATTACAAGCAA-TGGACCACAGAGGATGGTGGGTCCAACATC 4282
Query 4311 TGGTGTTTCCTCATTTACCCCTGA-AGGGTACAGGGGTCCTGTTTTG-TCGTCGTCTCCA 4368
|| ||||| |||||||| ||||| | | ||||| || || |||||| | || |||||
Sbjct 4283 CGGAGTTTCATCATTTACACCTGATATG-TACAGAGGCCCAGTTTTGCTA-TCTTCTCCG 4340
Query 4369 GCCA-TGCCATTTCAGTCCACAACGTTCCAGTATCCTGTC-TTTCCTTTTGGAAACAGCT 4426
|| | | |||| | | ||||| | || |||||||| | | ||||||||||||| ||| |
Sbjct 4341 GC-AGTTTCATTCCCGCCCACAGCATTTCAGTATCCCG-CGTTTCCTTTTGGAACCAGTT 4398
Query 4427 TCCC-CGTTACCTCAGCGAATTTCCCTGG-TGCTTCTACAGCACACATGGATTCTTCTTC 4484
| || | || ||||||| ||||| || || | |||| || || ||||||| ||||| ||
Sbjct 4399 TTCCTC-TTGCCTCAGCAAATTTTCCAGGCT-CTTCGACTCCATACATGGACTCTTCATC 4456
Query 4485 AAGCGGGAGAGCTT-GCTTCCCCGGTGTCAACTCTCAAATATTGGGTCCTGGAGTT-CCA 4542
||| || || |||| | |||||| |||||||||||||||||||||||| |||||| |||
Sbjct 4457 AAGTGGCAG-GCTTTGTTTCCCCCCTGTCAACTCTCAAATATTGGGTCCAGGAGTTGCCA 4515
Query 4543 GTTCCGTCTAATTACCCAAGACCTTATATAGTTGGCCTCCCAAACGGTGGTAGCAATGGC 4602
| ||||||||||| ||||| |||||| | || ||||||||||||| ||||||||
Sbjct 4516 -TCCCGTCTAATTATCCAAGGCCTTATGTTGTAAACCTCCCAAACGGT---AGCAATGGA 4571
Query 4603 GGTGTTTTGGACAATGGC-GCG-AAA-TGGTTTAGGTCAGGACTTGACTTAAATTCTGGT 4659
|| |||| |||||| | | | ||| |||||||| ||||| |||||||||||||| ||
Sbjct 4572 GGAGTTTCGGACAACAACAGTGCAAAATGGTTTAGATCAGGTCTTGACTTAAATTCCGGA 4631
Query 4660 CCTGGAGGTCATGAAACAGA-GGGAAGAGACGAATCAACACTTGTGGCAAGG-CAATTAT 4717
|| ||||| |||||||| || |||| |||| ||| || ||||||| ||| | |||||||
Sbjct 4632 CCAGGAGGGCATGAAACTGATGGGA-GAGATGAAGCAGCACTTGTA-CAAAGACAATTAT 4689
Query 4718 CCTCATCTGCTTCCTTACCTTTGAAGGAGGATCAAGCAAGAATGTATCAAATGTCAGGTG 4777
| || || | ||||||||||||||| || ||||| |||||||||||||| ||||||||||
Sbjct 4690 CTTCCTCAGGTTCCTTACCTTTGAAAGATGATCAGGCAAGAATGTATCAGATGTCAGGTG 4749
Query 4778 GTGT-TCTGAAGAGGAAAGAACCGGAAGGAGGATGGGATGGATATAGGCAGTCCTCATGG 4836
|| | ||| |||||||| ||||| || || |||||||||||||||| ||| |||||||||
Sbjct 4750 GT-TCTCTCAAGAGGAAGGAACCAGATGGTGGATGGGATGGATATAAGCAATCCTCATGG 4808
Query 4837 CAATAACAGTAGCTCAGAATCTC 4859
|||||||| | |||||||||||
Sbjct 4809 CAATAACAA-ACCTCAGAATCTC 4830
Score = 411 bits (222), Expect = 4e-113
Identities = 939/1269 (74%), Gaps = 114/1269 (9%)
Strand=Plus/Plus
Query 1740 AGCTGGTTTGAGTAGAAGCTTCTCATCACACAGGAA-TGTC-CCTTCTGAGAAAATTTCT 1797
|||||| |||| || ||||| ||||| || | ||| || | |||| |||||| |||||
Sbjct 1556 AGCTGGGCTGAGCAGGAGCTTTTCATCGCATA-GAACTG-CAACTTCGGAGAAAGTTTCT 1613
Query 1798 CAATCAAGTTTGACATCTGAAAAGACTCT-TGAGGTTCCTCTGACTGAGGGTTCCGGTAA 1856
||||||| | || || ||||||||||| | ||| || || || |||| |||| | ||||
Sbjct 1614 CAATCAACTCTGGCACCTGAAAAGACT-TGTGACGTACCGATGGCTGAAGGTTTCAGTAA 1672
Query 1857 TAAATTGATTGTGAAGCTGCCGAATCGTGGTCGAAGTCCTGCTCAAAGTGTGAGTGGAGG 1916
|| ||||| || ||||||||||| |||||||| ||||| || || ||||| ||||||||
Sbjct 1673 CAAGTTGATCGTTAAGCTGCCGAAACGTGGTCGCAGTCCGGCACAGAGTGTTAGTGGAGG 1732
Query 1917 CT-CTTTGGAAGACCCTGCA-CCGGTGAATAGCAGAGTTTCTTCACCTGTGCATGCGGTG 1974
| |||| || ||||||||| ||| |||||||||| | | |||||||| | | | | |
Sbjct 1733 TTCCTTT-GAGGACCCTGCAGTGGGT-AATAGCAGAGCTCCATCACCTGTCCCTTCCGAG 1790
Query 1975 AAGCAGGAACTATGTGA-CAATAACGGGAGAGaaaaaaaTCATTCTTATCGACCTAA-TG 2032
||||| || | || ||| | | |||| || ||||| ||| || | |||||| |||| |
Sbjct 1791 AAGCATGATCAATTTGACCGA-AACGTGAAAGAAATGAATGATACATATCGAGCTAACT- 1848
Query 2033 TGAGCTCTG-T-CTTGAATGCTGAGTCTTGGCAAAGCAATGA-ATTAAAAGATATTTTGA 2089
| ||| ||| | | | ||| |||| |||| ||||| |||||| |||||| || | | ||
Sbjct 1849 TTAGCCCTGATGC-T-AATACTGAATCTTCGCAAAACAATGACCTTAAAA-ATCTATCGA 1905
Query 2090 CAGGCTC-GCAAGAGGCAGCTGGTTCACCAC-T-TG-T--TGCTGGTGATGAGCGCGG-A 2142
||| || | | |||| ||||||||| || | | || | |||||||| ||||| || |
Sbjct 1906 CAGTTTCAG-ATGAGGTAGCTGGTTC-CC-CTTCTGTTAATGCTGGTGGTGAGCATGGCA 1962
Query 2143 GGGGATCTTAAGGATTCTGA-TAAAGCATCT-GGGAATGTTAAAGGCACATCT--TCCT- 2197
|| | |||| |||||| | ||||| | | ||||||| ||| ||| ||| | ||
Sbjct 1963 -AGGCTGTTAATGATTCT-AGTAAAGTA-GTAGGGAATGCCAAACCCACTTCTCCTACTC 2019
Query 2198 TAGGAAATGA-GTTCAAATCTGGAGAGAGGCATGGCGGAACACTCAGTTCGATGAATGCT 2256
||||| |||| || |||| ||| | | |||||| | ||| ||| ||| || ||||||||
Sbjct 2020 TAGGAGATGACGTCCAAA-CTGAAAAAAGGCATTGTGGATCACACAGCTCTATGAATGCC 2078
Query 2257 TTGATTGAAAGTTGTGTCAGATACTCTGAGACGAATGCCTCTTTGGCTGGTTCGGATGAT 2316
|||||||||||||||||||| |||||||||| ||||| | | |||||||| ||||||||
Sbjct 2079 TTGATTGAAAGTTGTGTCAGGGACTCTGAGACAAATGCGTGTATGGCTGGTGCGGATGAT 2138
Query 2317 GTTGGAATGAATCTTCTTGCTAGTGTTGCTGCTGATGAGATGTCTAAATCGCCTGTTGCA 2376
||||||||||||||||| |||| ||| ||||||||||| ||||| ||||| |||||||||
Sbjct 2139 GTTGGAATGAATCTTCTAGCTACTGTAGCTGCTGATGAAATGTCCAAATCCCCTGTTGCA 2198
Query 2377 TCTCCCTCAGTATCTCA-GCCTCCAAATTCCGTGATGAATGAAAATTCTACTGTAGGGA- 2434
|| ||||| ||||| || | | || ||||| ||||||||| | | || | || | |
Sbjct 2199 TCACCCTCTGTATC-CAGGGTTTCAGATTCCTTGATGAATG-ATA-GCT-CCATA-GCAC 2253
Query 2435 -AC-AATACAAAGCTAATGGCTTCGGATGGCTTGCCTCACGAGCAA-CATCAAGCTGTTT 2491
|| ||| | | | ||| ||| ||||||||| |||| ||| ||| | | || || ||
Sbjct 2254 CACGAAT-C--A-CAAAT-TCTTTGGATGGCTTACCTCGCGAACAAGC-TGAACCT-ATT 2306
Query 2492 G-TACCTCTGTCAGT-ACTGAGCAAGGTGAGCAACATGTTAGCAGTAGTGGCACA-CAGT 2548
| | | || | ||| | |||||||||||| | |||||||| | ||||
Sbjct 2307 GCCAAGAATCCCA-TGGTTGA--TA-TTGAGCAACATGTCAATAGTAGTGG-TGAGCAGT 2361
Query 2549 T---GGAGTCAGA-AATAAAAAATGAATCTAAGACC-GGAGATCGTGATAAGAGCT-CGA 2602
| || | || ||| ||||| |||||| || ||||||| |||| ||| || ||
Sbjct 2362 TGCCGGCTTTGGAGAAT-GTGAATGATTCTAAG-CCGGGAGATCTTGATGAGAACTCCG- 2418
Query 2603 ATTCAGACACT-GAAG-ATCTGCAAAGGTTGGTGGATCAGTGCTTAGAGAGCAATGACAA 2660
| ||||| | | |||| || ||||||||||||||||||||||||||||||||||||| ||
Sbjct 2419 ACTCAGA-AATCGAAGAAT-TGCAAAGGTTGGTGGATCAGTGCTTAGAGAGCAATGAAAA 2476
Query 2661 TTCAGATGGTGTTGTTGCTTCGCCTGCTTTACCCACTAA-AGCCGTTA-AGGAAAAGATT 2718
|||||||| |||||||||| | | || | |||| || || | || || |||| ||
Sbjct 2477 TTCAGATGATGTTGTTGCTCCAAGTACTGTGGCCAC-AACAGGCATTGGAG-AAAACATG 2534
Query 2719 T-TGAATGATAGTGACTC-TGGGGAACTGAAG-GATATAAAGACTGATGTTAAATCAGAG 2775
| ||| ||||||||| | ||||| | | | | || |||||||||||||| |||||||
Sbjct 2535 TCTGA-TGATAGTGA-TAGTGGGGTAGTTA-GTGACCTAAAGACTGATGTTGCATCAGAG 2591
Query 2776 GCTGATTGCACAT--CTGACT-CAACGAA-AAGAGTAGCAAGCTCAATGCTAACCGAATG 2831
| || | | | | || | ||||||| |||| || || ||| || ||| |||||
Sbjct 2592 ACAGAACG-AG-TGGCAGA-TACAACGAAGAAGAC-AGGAAACTCTTTGTTAAGTGAATG 2647
Query 2832 TAGAG--AT-GT-A-A-GTAAAAAGGTAGATTCTGTGGCTGTTGAACAG--ACTCCCTTG 2883
|| || || | | | || | || | ||||||| ||| || |||||| || ||| |
Sbjct 2648 TAAAGCCATTGGCAGATGTCAGAATGCAGATTCTTTGGTTGCTGAACATTCACACCC--G 2705
Query 2884 GAAGGTGTTGATGAT-GATAAGAAAGAAGAGAAACCCCCAACGGCG-T--TGAGTTCTGA 2939
|| | ||||| |||| | || ||||||||||||||| || || | | ||||||||||
Sbjct 2706 GACGTTGTTGGTGATAG-TACGAAAGAAGAGAAACCG--AA-GGTGATAGTGAGTTCTGA 2761
Query 2940 GCTAGTTAA 2948
||| |||||
Sbjct 2762 GCTTGTTAA 2770
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 207604060715
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5