BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G48060.1
Length=5250
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485166 jgi|Araly1|485166|fgenesh2_kg.5__1158__AT3G48060.1 7949 0.0
Ahg951082 jgi|Araly1|951082|scaffold_802969.1 1212 0.0
> Ahg485166 jgi|Araly1|485166|fgenesh2_kg.5__1158__AT3G48060.1
Length=5057
Score = 7949 bits (4304), Expect = 0.0
Identities = 4823/5073 (95%), Gaps = 37/5073 (1%)
Strand=Plus/Plus
Query 194 AAGGTATCGAATATTGTCTGGGGAAAAAAGGAA-TTTTGAGGATTTGTTTGATTTTCGCT 252
||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 1 AAGGTATTGAATATTGTCTGGGGAAAAAAGGAATTTTTGAGGATTTGTTGGATTTTCGCT 60
Query 253 GAGGA------AATTGATGTTGTTCGAAGGAGAAGATGATAGAAGGCTATGCATGGGAGG 306
||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GAGGAGTTGTGTATTGATGTTGTTCGAAGGAGAAGATGATAGAAGGCTATGCATGGGAGG 120
Query 307 GTTTGTGAGCGGAGGCACAAAAGTCGTCGTCGGCACATGTTGATATCTTCCTCTCGTGTA 366
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 121 GTTTGTGAGCGGAGGCACAAAAGTCGTCGCCGGCACATGTTGATATCTTCCTCGCGTGTA 180
Query 367 ATTGCGACTGTGGAAGGTGGTGGTTCTTCTTGTTTGTCCTTATCTTCATCTACCTCGTTT 426
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 181 ATTGCGACTGTGGAAGGTGGTGGTTCTTCTTGTTTGTCATTATCTTCATCTACCTCGTTT 240
Query 427 TCTAAGGACGGGCGCAAAATTAGTGTTGGTGACTGTGCTCTGTTTAAGCCACCACAGGAT 486
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 241 TCTAAGGACGGGCGCAAAATTAGTGTTGGTGACTGTGCTCTTTTTAAGCCACCACAGGAT 300
Query 487 TGTCCACCGTTCATTGGGATAATTCGCTTGATCATTGCTGAGGAAGAAGATAAGTTGAAG 546
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 301 TGTCCACCGTTCATTGGGATAATTCGCTTGATCATTGCTGAGAAAGAAGATAAGTTGAAG 360
Query 547 TTGGGTGTTAATTGGCTTTATCGACCCACTGAATTAAAACTTGGCAAAGGTATCCTTCTA 606
||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||
Sbjct 361 TTGGGTGTTAATTGGCTGTATCGACCCACAGAATTAAAACTTGGCAAAGGCATCCTTCTA 420
Query 607 GAGGCTGAGCCGAACGAACTCTTTTATTCCTTTCACGAGGATAATATACCTGCAGCATCT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 421 GAGGCTGAGCCGAACGAACTCTTTTATTCCTTTCACGAGGATAATATACCTGCTGCATCT 480
Query 667 TTACTGCATCCGTGTAAAGTTGCCTTCCTTCCAAGAGGTGTTGAACTGCCATCTGGTATC 726
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CTATTGCATCCGTGTAAAGTTGCCTTCCTTCCAAGAGGTGTTGAACTGCCATCTGGTATC 540
Query 727 AGCTCGTTTGTGTGTCGGCGAGTTTACGACGTTACAAACGAGCGCTTATGGTGGCTGACT 786
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 541 TGCTCGTTTGTGTGTCGGCGAGTTTACGACGTTACAAACGAGCGCATATGGTGGCTGACA 600
Query 787 GATCAAGACTATATTGATGATCGACAACTAGAAGTAGACAAGTTATTGTGTAAGACTCGT 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GATCAAGACTATATTGATGATCGACAACTAGAAGTAGACAAGTTATTGTGTAAGACTCGT 660
Query 847 TCAGAAATGCATACAACATTACAGCAGGGTGGTCGTTCTCCAAAGTCCATGAATAGTCCA 906
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 661 TCAGAAATGCATACAACATTACAGCAGGGTGGTCGTTCTCCCAAGTCCATGAATAGTCCA 720
Query 907 ACAACATCACAACCGAAAGATGGCATCCAGAACAACAACTCTCTTT-TCTCTCAGAGTAA 965
|||||||||||| ||||||||||||| |||||||| |||||| ||| | |||||| ||||
Sbjct 721 ACAACATCACAAGCGAAAGATGGCATACAGAACAATAACTCT-TTTCTTTCTCAGGGTAA 779
Query 966 GGGAAGGAAAAGAGAGCGTATGGATCATGGTTCTGAGTCTGTTAAACGGGAACGTTCTAG 1025
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 780 GGGAAGGAAAAGAGAGCGTATGGATCATGGTTCCGAGTCTGTTAAACGGGAACGTTCTTC 839
Query 1026 TCGAGTAGATGACAGTGGTTCCGGTCCCCTCAGAACCGAAAGCGGTTTAACGTCTGAGAT 1085
||||||||||||||||||||| || ||||||||||| ||||||||||||| |||||||||
Sbjct 840 TCGAGTAGATGACAGTGGTTCTGGCCCCCTCAGAACAGAAAGCGGTTTAAAGTCTGAGAT 899
Query 1086 TTTAAAATTTACAGAGAAAGGTGGTCTGGTGGATTCTGAAGGAGTTGAAAAATTGGTTCA 1145
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 900 TTCAAAATTTACAGAGAAAGGTGGTCTGGTGGATTCGGAAGGAGTTGAAAAATTGGTGCA 959
Query 1146 GCTCATGCTGCCTGAGAGGAATGAAAAGAAAATAGACTTAGTTGGCCGTGCGATTCTTGC 1205
||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 960 GCTCATGCTACCTGAGAGGAATGAGAAGAAAATAGACTTAATTGGCCGTGCGATTCTTGC 1019
Query 1206 AGGGTTTGTAGCAGCGACAAACAGGTTTGATTGCCTTAGTCGTTTTGTCCAGCTCAGGGG 1265
|||| ||||||| || ||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1020 AGGGGTTGTAGCGGCAACAGACAAGTTTGATTGCCTTAGTCGTTTTGTCCAGCTCAGGGG 1079
Query 1266 ATTACCCGTGTTTGATGAGTGGCTGCAGGAAGTTCATAAAGGGAAAGTTGGGGATGGGGG 1325
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1080 ATTACCCGTGTTTGATGAGTGGCTGCAGGAAGTTCATAAAGGGAAAGTTGGAGATGGGGG 1139
Query 1326 CAGTCCCAAAGACAGTGATAGGCTAGTAGACGATTTCCTCTTAGTCTTACTTCGGGCTCT 1385
||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 1140 CAGTCCCAAGGACAGTGATAGGTTAGTAGACGATTTCCTCTTAGTCTTACTTCGTGCTCT 1199
Query 1386 TGATAAGCTACCGGTGAATCTCAACGCGCTTCAGACTTGTAACATTGGAAAGTCTGTTAA 1445
||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1200 TGACAAGCTACCTGTGAATCTCAACGCTCTTCAGACTTGTAACATTGGAAAGTCTGTTAA 1259
Query 1446 TCATCTACGCTCACATAAAAATTCAGAGATTGGGAAAAAAGCAAGGAGCTTGGTTGACAC 1505
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 TCATCTACGGTCACATAAAAATTCAGAGATTGGGAAAAAAGCAAGGAGCTTGGTTGACAC 1319
Query 1506 TTGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAAGTCTGGATCCAACCAGGGTGTTTC 1565
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 ATGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAAGTCTGGATCCAACCAGGGTGTTTC 1379
Query 1566 CTGGCCTGGAAGACTGAGTCATGGGGGAAGGCATTCAGGTGGTTCCGCGGAGGCAAACAA 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 CTGGCCTGGAAGACTGAGTCATGGGGGAAGGCATTCAGGTGGTTCCGCGGAGGCAAACAA 1439
Query 1626 GACATCATCATCACACCTACATGCTTCTAAGTCTGTCTCGGTCAAACAACAGGTGGAAAA 1685
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1440 GACATCATCATCACATTTACATGCTTCTAAGTCAGTCTCGGTCAAACAACAGGTGGAAAA 1499
Query 1686 CAACCTGAAGTGTGTAGCCACGTCGCCAGGCTCCACAAGATCAGCTCCTTCTCCGGGATC 1745
|||||||| ||||||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct 1500 TAACCTGAAATGTGTAGCCACGTCGCCAGGCTCTACAAGATCAGCCCCATCTCCGGGATC 1559
Query 1746 AGGTGGTAATGTTTCTAAAGATGGACAGCAGCGAAATGCTGGGGCTGGTGGTGTATCTGA 1805
||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1560 TGGTGGTACTGTTTCTAAAGATGGACAGCAACGAAATGCTGGGGCTGGTGGTGTATCTGA 1619
Query 1806 AGTCCTAGCTGCAGTAAAGGATGAGAAAAGTAGCAGCTCCAGTCAGTCGCACAATAATAG 1865
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1620 AGTCCTAGCTGCAGTAAAGGATGAGAAAAGTAGCAGCTCCAGTCAGTCCCACAATAATAG 1679
Query 1866 TCAGTCTTGCTCGAGCGAGCATGCTAAAACAGGCAATTTATGTGGAAAAGAAGATGCAAG 1925
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1680 TCAGTCTTGCTCGAGCGAGCATGCTAAAACAGGCAATTTATGTGGGAAAGAGGATGCAAG 1739
Query 1926 AAGCTCTACTGCTGGTTCAACTTTGAAGAAGTGTTCCGGTGGCTCTTCAAGGCATCGGAA 1985
|||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1740 AAGCTCAACTGCTGGTTCAACTTTGAAGAAGTGCTCTGGTGGCTCTTCAAGGCATCGGAA 1799
Query 1986 GTCAAACAATGTGTTTCAAGGTTCGTCTTCGTCAGCATCCCCTAGGGGAGCTGGTTTGAG 2045
||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||
Sbjct 1800 ATCAAACAATGTGTTTCAAGGTTCATCTTCGTCAGCATCCCCTAGGGAAGCTGGTTTTAG 1859
Query 2046 TAGAAGCTTCTCATCACACAGGAATGTCCCTTCTGAGAAAATTTCTCAATCAAGTTTGAC 2105
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 TAGAAGCTTCTCATCGCAAAGGAATGTCCCTTCTGAGAAAATTTCTCAATCAAGTTTGAC 1919
Query 2106 ATCTGAAAAGACTCTTGAGGTTCCTCTGACTGAGGGTTCCGGTAATAAATTGATTGTGAA 2165
||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1920 ATCTGAAAAAACTCTTGAGGTTCCTCTGACTGAGAGTTCCGGTAATAAATTGATTGTGAA 1979
Query 2166 GCTGCCG---CGGGGTCGAAGTCCTGCTCAAAGTGTGAGTGGAGGCTCTTTGGAGGACCC 2222
|||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 GCTGCCTAATCGGGGTCGCAGTCCTGCTCAAAGTGTGAGTGGAGGCTCTTTGGAGGACCC 2039
Query 2223 TGCACCAGTGAATAGCAGAGTTTCTTCACCTGTGCATACGGTGAAGCAGGAACTGTGTGA 2282
||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2040 TGCGCCGGTGAATAGCAGAGTTTCTTCACCTGTGCATGCGGTGAAGCAGGAACTGTGTGA 2099
Query 2283 CAATAACTG-GAGAGaaaaaaaTCATTCTTATCGAGCTGATGTGAGCTCTGTCTTGAATG 2341
|||||| || |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 2100 CAATAA-TGTGAGAGAAAAAAATCATTCTTATCGAGCTAACGTGAGCTCTGTCTTGAATG 2158
Query 2342 CCGAGTCTTGGCAAAGCAATGAATTAAAAGATATATTGACAGGCTCGCAAGAGGCAACTG 2401
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 2159 CCGATTCTTGGCAAAGCAATGAATTAAAAGATATTTTGACAGGCTCGCAAGAGGCAGCTG 2218
Query 2402 GTTCACCACTTGTTGTTGCTGGTGATGAGCGCGAAGGGGCTCTTAAGGATTCTGATAAAG 2461
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 2219 GTTCACCACTTGTTGTTGCTGGTGATGAGCGCGGAGGGGCTCTTAAAGATTCTGATAAAG 2278
Query 2462 CATCTGGGAATGTTAAAGCCACATCTTCATTAGGAAATGAGTTCAAATCTGGAGAAAGAC 2521
|| ||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| |
Sbjct 2279 CAGCTGGGAATGTTAAAGGCACATCTTCCTTAGGAAATGAGATCAAATCTGGAGAAAGGC 2338
Query 2522 ATGGCGGAACACTCAGTTCGATGAATGCTTTGATTGAAAGTTGTGTCAGATACTCTGAGA 2581
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2339 ATGGCGGAACACTCAGTTCGATGAATGCTTTGATTGAAAGTTGTGTCAGATACTCCGAGA 2398
Query 2582 CAAATGCCTCTTTGGCTGGTTCGGATGATGTTGGAATGAATCTTCTTGCTAGTGTTGCTG 2641
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2399 CAAATGCGTCTTTGGCTGGTTCGGATGATGTTGGAATGAATCTTCTTGCTAGCGTTGCTG 2458
Query 2642 CTGATGAGATGTCTAAATCGCCTGTTGCATCACCCTCAGTATCTCAGCCTCCAAATTCCT 2701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2459 CTGATGAGATGTCTAAATCGCCTGTTGCATCACCCTCAGTATCTCAGCCTCCAAATTCCT 2518
Query 2702 TGATGAATGAAAATTCTACTGTAGGGAACAATACAAAGCTAATGGCTTCGGATGGCTTGC 2761
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2519 TGATGAATGAAAATTCTACTGTAGGGAACAATACAAAGCTAATCGCTTCGGATGGCTTGC 2578
Query 2762 CTCATAAGCAACATCAAGCTGTTCGCCCCACTCTCAGTAATGAGCAAGGTGAGCAACATG 2821
|||| ||||||||||||||| |||| ||||| |||||||||||||||||||||||||||
Sbjct 2579 CTCACGAGCAACATCAAGCTGCTCGCACCACTGTCAGTAATGAGCAAGGTGAGCAACATG 2638
Query 2822 TTAGCAGTAGTGGCACACAGTTGGAGTCAGAGATAAAAAATGAATCTAAGACCGGAGATC 2881
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2639 TTAGCAGTAGTGGCACACAGTTGGAGTCAGAGATAAAAAATGAGTCTAAGACCGGAGATC 2698
Query 2882 GTGTTAAGAGCTCGAATTCAGACACTGAAGATCTGCAAAGGTTTGTGGATCAGCGCCTAG 2941
||| ||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||
Sbjct 2699 GTGATAAGATCTCGAATTCAGACACCGAAGATCTGCAAAGGTTGGTGGATCAGCACCTAG 2758
Query 2942 AGAGCAATGAAAATTCAGATGGTGTCGTTGCTTCGCCTCCTTTACCCACAAAAGTCATTA 3001
||| |||||| ||||||||||||| ||||||||||||| |||| ||||| |||| ||| |
Sbjct 2759 AGAACAATGACAATTCAGATGGTGCCGTTGCTTCGCCTGCTTTGCCCACTAAAGCCATCA 2818
Query 3002 AGGAAAATATTTTGGATGATAGTGACTCTGGAGAAGTGAAGGATATAAAGACTGATGTTA 3061
||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct 2819 AGGAAAAGATTTTGGATGATAGTGACTCTGGGGAAGTAAAGGATATAAAGGCTGATGTTA 2878
Query 3062 AATCAGAGGCTGATTGCACATCTGACTTAACAAAAAGAGTAGCAAGCTCAATGCTAACCG 3121
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |
Sbjct 2879 AATCAGAGGCTGATTGCACATCTGACTCAACAAAAAGACTAGCAAGCTCAATGCTAACTG 2938
Query 3122 AATGTAGAGATGTAAGT-AAAATGGTAGATTCTGTGGCTGTTGAACATACTCCCTTGGAA 3180
||||||||||||||||| |||| |||||||||||| ||||||||||| ||||| |||||
Sbjct 2939 AATGTAGAGATGTAAGTCAAAA-GGTAGATTCTGTTGCTGTTGAACACACTCCTTTGGAC 2997
Query 3181 GGTGTTGATGATGATAAGAAAGAAGAGAAACCCCCAACGGCGTTGAGTTCTGAGCTAGTT 3240
||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2998 CGTGTTGATGAT-A-A-GAAAGAAGAGAAACCCCCAACGGCGTTGAGTTCTGAGCTAGTT 3054
Query 3241 AAAAAAGTGGAAGAAGATGTACCCGTTTCTTCTGGGATTTCAAGGGGTATGGATGCTGTA 3300
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct 3055 AAAAAAGTGGAAGAAGATGTACCAGTTTCTTCTGGGATTTCAAGCGGTATGGATGCAGTA 3114
Query 3301 AGCATTGATAGACCTATAACTGAAATGGTCAATAATATTGCGTTTAATCATATGGACCAA 3360
|||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct 3115 AGCATTGATAGACCTATAACTGAAATGGTCAATAATATAGCGGTTAATCATACAGACCAA 3174
Query 3361 AAAGATATAAAGAAGATTAAGCAGGATTTTGATAC-TTCTGTGGGAGCTGTAAAGGATGC 3419
|||||||||||||||||||||||||||| |||| | || |||||| ||| ||||||||||
Sbjct 3175 AAAGATATAAAGAAGATTAAGCAGGATTGTGATGCCTT-TGTGGGTGCTATAAAGGATGC 3233
Query 3420 CTCAGCCGGTTTGGACTCATCTGTAACTAAAGGTAAAGTTGAGCCTGTGGAGGGGAATCT 3479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3234 CTCAGCCAGTTTGGACTCATCTGTAACTAAAGGTAAAGTTGAGCCTGTGGAGGGGAATCT 3293
Query 3480 AGAAAATATTGAAATCATGGAACGGTACTCAGGATTAAGAGCTACTCCAGGATTATCACC 3539
||||||||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||
Sbjct 3294 AGAAAATATTGAAGTCAAGGAACGGTACTCAGGATTAAAAGCTACTCCAGGAGTATCACC 3353
Query 3540 TAAAGAAGCAGAGGATCTTAAGAGACCGAATGCGCCTAAAACCAGTGATGCTGATGGAGA 3599
|||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 3354 TAAAGATGCAGAGGATCTTAAGAGACCGAATGGGCCTAAAACTAGTGATGCTGATGGAGA 3413
Query 3600 TGAAGCGGGGGAATGTACGTCTGCTGCCAGAGATGCTTCTTCCGTTTCAGCTGCAGCTTC 3659
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3414 TGAAGCGGAGGAATGTACGTCTGCTGCCAGAGATGCTTCTTCCGTTTCAGCTGCAGCTTC 3473
Query 3660 AGCTTCAGCTGGCTCTGAGATGGATGCCAGAGTTGAATTTGATCTAAATGAAGGTTTTGA 3719
|||| | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3474 AGCT---G--G-CTCTGAGATGGATGCCAGAGTTGAATTTGATCTAAATGAAGGTTTTGA 3527
Query 3720 TGGAGACGATGCACAACATGGGGACTCAAATAACTTCTCTGGATCTGTAGTTTTGACGCC 3779
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3528 TGGAGACGATGCAAAACATGGGGACTCAAATAACTTCTCTGGATCTGTATTTTTGACGCC 3587
Query 3780 TACTCCTCTACAACCAGTTAATACCTTACCTTTTCCGGTGGCTCCTGTATCTAGTGGAAT 3839
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 3588 TACTCCTCTACAACCAGTTAATACCTTGCCTTTTCCTGTGGCTCCTGTATCTAGTGGAAT 3647
Query 3840 TCCTGCATCCATTACTGTTGCTGCTGCCGTCAAAGGTCCGTTTGTTCCACCTGAAGATCT 3899
||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||
Sbjct 3648 TCCTGCATCCATTACTGTTGCTGCTGCTGCCAAAGGTCCGTTTGTTCCACCCGAAGATCT 3707
Query 3900 GTTGAGATATAAAGGGGCTGTTGGTTGGAGAGGATCTGCTGCCACTAGTGCCTTCCGCCC 3959
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3708 GTTGAGAAATAAAGGGGCTGTTGGTTGGAGAGGATCTGCTGCCACTAGTGCCTTCCGCCC 3767
Query 3960 AGCTGAGCCAAGAAAAGCTCAGGATGTGTTACTGAGCATTAACAATACCTCTACATCTGA 4019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3768 AGCTGAGCCAAGAAAAGCTCAGGATGTGTTACTGAGCATTAACAATACCTCTACATCTGA 3827
Query 4020 TGCATCTACTTCTGCTGGCAAACAGACAAGGACGTTTCTGGATTTTGACTTGAATGTACC 4079
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3828 TGCATCTACATCTGCTGGCAAACAGACAAGGACGTTTCTGGATTTTGACTTGAATGTACC 3887
Query 4080 TGACGAGAGAGTCCTTGAAGATTTGGCTTCCCAAAGATCTGGAAATCCCACAAATTGTAC 4139
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 3888 TGACGAGAGAGTCCTTGAAGATTTGGCTTCCCAAAGAACTGGAAATGCCACAAATTGTAC 3947
Query 4140 ATCTGGTATCACAAATAATTTTGACCAAGTACGTTCTGGGGTCATGGGTTCCGCCCTTGA 4199
|||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||
Sbjct 3948 ATCTGGTATCACCAATAGTTTTGACCAAGCACGTTCTGGGGTCATGGGTTCCGCGCTTGA 4007
Query 4200 TCATTCTTCTGGAGGCCTTGATCT--A---AA-CAAAGTTGATGATTTAACTGATATGAA 4253
|||||||||||| ||||||||||| | || |||||||||||||| ||||||||||||
Sbjct 4008 TCATTCTTCTGGGGGCCTTGATCTTGATCTAAACAAAGTTGATGATTCAACTGATATGAA 4067
Query 4254 CAGCTACACA-ATGAACAGTAGTCATCGGCTAGATTCATCTTTTCAGCAGGTTAAATTAC 4312
|| ||||| | |||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4068 CAACTACA-ATATGAGCAGTAGTCATCGGCTAGATTCATCTTTTCAGCACGTTAAATTAT 4126
Query 4313 CATCGACTGGTGGTCGTAGAGATTTTGATTTAAATGATGGACCTGTGGGTGATGATGCAG 4372
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 4127 CATCGACTGGTGGTCGTAGAGATTTTGATTTAAATGATGGACCTGCGGGTGATGATGCGG 4186
Query 4373 CTGTTGAGCCATCGATGGTTCTAAATCAACATTCACGAAGTGGCTTGCCATCACAACCAT 4432
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4187 CTGTTGAGCCATCTATGGTTCTAAATCAACATTCACGAAGTGGCTTGCCCTCACAACCAT 4246
Query 4433 CTCTCTCTGGAATTCGAGTGAATGGCGAAAACATGGCTAGTTTCTCAACTTGGTTTCCTG 4492
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4247 CTCTCTCTGGAATACGAGTGAATGGCGAAAACATGGCTAGTTTCTCAACTTGGTTTCCTG 4306
Query 4493 CTGCTAACGCTTATTCAGCTGTGAGCATGCCTCCAATTATGCCTGAGAGAGGTGATCAGC 4552
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 4307 CTGCTAACGCTTATTCAGCAGTGAGCATTCCTCCAATTATGCCTGAGAGAGGTGATCAGC 4366
Query 4553 CTTTTCCAATGATTGCCACTCGTGGCCCACAGAGAATGTTGGGTCCAACAACTGGTGTTT 4612
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct 4367 CTTTTCCAATGATTGCCAATCGTGGACCACAGAGAATGTTGGGTCCAACAACTGGTGTTT 4426
Query 4613 CCTCATTTTCCCCTGAAGGGTACAGGGGTCCTGTTTTGTCGTCGTCTCCAGCCATGCCAT 4672
|||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 4427 CCTCATTTGCCCCTGAAGGGTACAGGGGTCCGGTTTTGTCGTCGTCTCCTGCCATGCCAT 4486
Query 4673 TTCAGTCCACAACGTTCCAGTATCCTGTCTTTCCTTTTGGAAATAGCTTCCCCGTTACCC 4732
||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 4487 TTCAGTCCACAACGTTCCAGTATCCTGTCTTTCCTTTTGGAAACAGCTTCCCCATTACCT 4546
Query 4733 CAGCGAATTTCCCTGGTGCTTCTACAGCACACATGGATTCTTCTTCAAGCGGGAGAGCTT 4792
||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 4547 CAGCGAATTTCTCTGGTGCTTCTACAACACACATGGATTCTTCTTCAAGTGGGAGAGCTT 4606
Query 4793 ACTTCCCCGGTGTCAACTCTCAAATATTGGGTCCTGGAGTTCCAGTTCCGTCTAATTACC 4852
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 4607 GCTTCCCCGGTGTGAACTCTCAAATATTGGGTCCTGGAGTACCAGTTCCGTCTAATTACC 4666
Query 4853 CAAGACCTTATATAGTTGGCCTCCCAAACGGTGGTAGCAATGGCGGTGTTTTGGACAATA 4912
||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||
Sbjct 4667 CAAGACCTTATATCGTTGGCCTCCCAAATGGTGGTAGCAATGGTGGAGTTTTGGACAATA 4726
Query 4913 GCGCGAAATGGTTTAGGTCAGGACTTGACTTAAATTCTGGTCCTGGAGGTCATGAAACAG 4972
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4727 GTGCGAAATGGTTTAGGTCAGGACTTGACTTAAATTCTGGTCCTGGAGGTCATGAAACGG 4786
Query 4973 AGGGAAGAGACGAATCAACACTTGTATCAAGGCAATTATCTTCATCTGCTTCCGTACCGT 5032
||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||
Sbjct 4787 AGGGAAGAGACGAATCAACACTTGTGGCAAGGCAATTATCCTCATCTGCTTCCTTACCGT 4846
Query 5033 CGAAGGAGGATCAAGCAAGAATGTATCAAATGTCAGGTGGTGTTCTGAAGAGGAAAGAAC 5092
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4847 TGAAGGAGGATCAAGCAAGAATGTATCAAATGTCAGGTGGTGTTCTGAAGAGGAAAGAAC 4906
Query 5093 CGGAAGGAGGATGGGATGGATATAGGCAGTCCTTATAACAATAACAATAACACACTTTAG 5152
||||||| |||||||||||||||||||| |||| || |||||||||||||||| ||| |
Sbjct 4907 CGGAAGGTGGATGGGATGGATATAGGCAATCCTCATGGCAATAACAATAACACATTTTTG 4966
Query 5153 GTCATTTTTCATGCATGTGTATCTATCTCTATACACCGGCTCAAAAAACTAGCGATAAAA 5212
|||||||||||||||||||| | |||||||||||||||| ||||| ||||| |||||||
Sbjct 4967 GTCATTTTTCATGCATGTGTGT--ATCTCTATACACCGGCACAAAAGACTAGAGATAAAA 5024
Query 5213 CAAATGTTAGTGGCTTTTGAGTGTGTTCAAAAT 5245
| |||||| ||||||||||||||||||||||||
Sbjct 5025 CGAATGTTGGTGGCTTTTGAGTGTGTTCAAAAT 5057
> Ahg951082 jgi|Araly1|951082|scaffold_802969.1
Length=4834
Score = 1212 bits (656), Expect = 0.0
Identities = 1274/1564 (81%), Gaps = 75/1564 (5%)
Strand=Plus/Plus
Query 275 GGAGAAGATGATAGAAGGCTATGCATGGGAGGGTTTGT---G-AG-CG-GAGGCA-CA-A 326
||||||||||| |||||||||||||||||||||||||| | | | |||| | | |
Sbjct 1 GGAGAAGATGAAAGAAGGCTATGCATGGGAGGGTTTGTCAGGTTGATGAGAGGAAGAAGA 60
Query 327 AA-GTCGTCGTCGGCACATGTTGATATCTTCC-TCTCGTGTAATTGCGA-CTGTGGAAGG 383
|| ||| |||||||| ||||| | | | ||| |||||||||||| ||| | || | |
Sbjct 61 AAGGTCATCGTCGGCTTATGTTTAGA-CCTCCTTCTCGTGTAATTTCGAGC-GTCCACGC 118
Query 384 TGGTGGTTCTTCTTGTTTGTCC-TTATCTTCATCTACCTCGTTTTCTAAGGACGGGCGCA 442
| | ||||||| | | | ||| || ||||| ||||| || |||||||||||||| ||||
Sbjct 119 TTCTTGTTCTTCGTCTCTCTCCATT-TCTTCTTCTACTTCCTTTTCTAAGGACGGACGCA 177
Query 443 AAATTAGTGTTGGTGACTGTGCTCTGTTTAAGCCACCACAGGATTGTCCACCGTTCATTG 502
||||||||||||||||| |||||| ||||| ||||| |||||||| |||||||| ||||
Sbjct 178 GAATTAGTGTTGGTGACTCTGCTCTCTTTAAACCACCGCAGGATTGCCCACCGTTTATTG 237
Query 503 GGATAATTCGCTTGATCATTGCTGAGGAAGAAGATAAGTTGAAGTTGGGTGTTAATTGGC 562
| | ||||||||| ||||| ||||| |||||| ||||| ||| || |||| |||||||
Sbjct 238 GTTTGATTCGCTTGGTCATTCCTGAGAAAGAAGGCAAGTTTAAGCTGCGTGTGAATTGGC 297
Query 563 TTTATCGACCCACTGAATTAAAACTTGGCAAAGGTATCCTTCTAGAGGCTGAGCCGAACG 622
| |||||||| | ||||| || ||||||||||| |||||| | |||||| |||| ||||
Sbjct 298 TGTATCGACCTGCGGAATTGAAGCTTGGCAAAGGCATCCTTTTGGAGGCTCAGCCTAACG 357
Query 623 AACTCTTTTATTCCTTTCACGAGGATAATATACCTGCAGCATCTTTACTGCATCCGTGTA 682
|| ||||||||||||||||||||||| | ||||| || ||||| ||| ||||||||||||
Sbjct 358 AAATCTTTTATTCCTTTCACGAGGATGAGATACCGGCTGCATCCTTATTGCATCCGTGTA 417
Query 683 AAGTTGCCTTCCTTCCAAGAGGTGTTGAACTGCCATCTGGTA-TCAGC-TCGTTTGTGTG 740
||||| |||| ||||||||||| |||||| |||||||||| | || | || || |||||
Sbjct 418 AAGTTACCTTTCTTCCAAGAGGCGTTGAATTGCCATCTGG-AGTC-TCTTCATTCGTGTG 475
Query 741 TCGGCGAGTTTACGACGTTACAAACGAGCGC-TTATGGTGGCTGACTGATCAAGACTATA 799
| |||||||||| || |||| || || || || |||||||||||||||||| ||||||
Sbjct 476 TTGGCGAGTTTATGATGTTATGAATGATTGCATT-TGGTGGCTGACTGATCAAAACTATA 534
Query 800 TTGATGATCGACAACTAGAAGTAGACAAGTTATTGTGTAAGACTCGTTCAGAAATGCATA 859
| ||||| || |||| ||||||||| |||||||||||||||||||| || || |||||||
Sbjct 535 TAGATGAACGGCAACAAGAAGTAGATAAGTTATTGTGTAAGACTCGCTCCGAGATGCATA 594
Query 860 CAACATTACAGCAGGGTGGTCGTTCTCCAAAGTCCATGAATAGTCCAACAACATCACAAC 919
| ||| | | ||||||||||||||||| || ||||||||||| |||||||| |||
Sbjct 595 CCACACT--A-CAGGGTGGTCGTTCTCC-TAG--GATGAATAGTCCGACAACATCGCAAG 648
Query 920 CG-AA--------AGATGGCATCCAGAACAACAACTCTCTTTTC-TCTCAGAGTAAGGGA 969
| || ||||||||| ||||||| ||||| |||||| || ||| ||||||||
Sbjct 649 TGAAAGCTGGGGCAGATGGCATGCAGAACAGTAACTC-CTTTTCTTCACAGGGTAAGGGA 707
Query 970 AGGAAAAGAGAGCGT-ATGGATCATGGTTCTGAGTCTGTTAAACGGGAACGTTCTAGTCG 1028
||||| ||||||||| | ||||| ||||| || ||||| |||||||||||| | |||||
Sbjct 708 AGGAAGAGAGAGCGTGCT-GATCAGGGTTCCGAATCTGTGAAACGGGAACGTCCAAGTCG 766
Query 1029 AGTAGATGACAGTGGTTCCGGTCCCCTCAGAACCGAAAGCGGTTT-AACGTCTGAGATT- 1086
|| ||||| |||||||| ||| ||| ||||| |||||| |||| || |||||||||
Sbjct 767 GGTTGATGATAGTGGTTCTGGTTTCCTAAGAACAGAAAGCAGTTTGAA-ATCTGAGATTG 825
Query 1087 TTAAAATTTACAGAGAAAGGTGGTCTGGTGGATTCTGAAGGAGTTGAAAAATTGGTTCAG 1146
||||| ||||||| ||||| || || || || ||||| || ||||| | |||||| |||
Sbjct 826 CTAAAA-TTACAGAAAAAGGCGGGCTAGTTGACTCTGATGGGGTTGAGAGATTGGTGCAG 884
Query 1147 CTCATGCTGCCTGAGAGGAATGAAAAGAAAATAGACTTAGTTGGCCG-TGCGATTCTTGC 1205
||||||||||||||||| ||||| |||||||||||||| ||| |||| | | ||||||||
Sbjct 885 CTCATGCTGCCTGAGAGAAATGAGAAGAAAATAGACTTGGTTTGCCGAT-CAATTCTTGC 943
Query 1206 AGG-GTTTGTAGCAGCGACAAACAGGTTTGATTGCCTTAGTCGTTTTGTCCAGCTCAGGG 1264
||| ||| |||||||| ||| ||| |||||||||||| ||||||||||||||||||||||
Sbjct 944 AGGTGTT-GTAGCAGCAACAGACAAGTTTGATTGCCTCAGTCGTTTTGTCCAGCTCAGGG 1002
Query 1265 GATTACCCGTGTTTGATGAGTGGCTGCAGGAAGTTCATAAAGGGAAAGTTGGGGATGGGG 1324
||||||| || |||||||||||||| |||||| |||||||||||||| ||||||||| |
Sbjct 1003 GATTACCTGTTTTTGATGAGTGGCTACAGGAAATTCATAAAGGGAAAATTGGGGATGCGA 1062
Query 1325 GCAGTCCCAAAGACAGTGATAGG-CTAGTAGACGATTTCCTCTT-AGTCTTACTTCGGGC 1382
||||||||||||| | |||||| | ||| |||||||| ||||| | |||||||||| ||
Sbjct 1063 GCAGTCCCAAAGATAATGATAGATC-AGTGGACGATTTTCTCTTGA-TCTTACTTCGTGC 1120
Query 1383 TCTTGATAAGCTACCGGTGAATCTCAACGCGCTTCAGACTTGTAACATTGGAAAGTCTGT 1442
||||||||||||||| ||||||||||| || || |||||||||||||| |||||||||||
Sbjct 1121 TCTTGATAAGCTACCTGTGAATCTCAATGCTCTACAGACTTGTAACATAGGAAAGTCTGT 1180
Query 1443 TAATCATCTACGCTCACATAAAAATTCAGAGATTGGGAAAAAAGCAAGGAGCTTGGTTGA 1502
||| ||| | || |||||||| || ||||| ||||||||||| |||||||||||||||||
Sbjct 1181 TAACCATTTGCGATCACATAAGAACTCAGAAATTGGGAAAAAGGCAAGGAGCTTGGTTGA 1240
Query 1503 CACTTGGAAGAAACGAGTTGAGGCAGAAATGGATGCGAAGTCTGGATCCAACCAGGGTGT 1562
|| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1241 TACGTGGAAGAAACGTGTTGAGGCAGAAATGGATGCAAAGTCTGGATCCAATCAGGGTAC 1300
Query 1563 TTCCTGGCCTGGAAGAC-T-G--AGTC--A--T-------GGGGGAAGGCATTCAGGTGG 1607
|| ||||||||||||| | | |||| | | ||||| || ||||||||||
Sbjct 1301 ATCTTGGCCTGGAAGACCTCGTCAGTCTGAAGTTTCTCATGGGGGTAGACATTCAGGTG- 1359
Query 1608 T-TCCGCGGAGGCAAACAA-GACATCATCATCACACCTACATGCTTCTAAGTCTGTCTCG 1665
| || || || |||| ||| ||||||| ||||||| |||||| |||||||||| || ||
Sbjct 1360 TATCTGCTGATGCAA-CAAAGACATCAACATCACATCTACATCCTTCTAAGTCCGTGTCC 1418
Query 1666 GTCAAACA-ACAGGTG-GAAAACAACCTGAAGTGTGTAGCCACGTCGCCAGGCTCCACAA 1723
|||||| | || | | ||||||| | |||||| || | | || || ||| | || || |
Sbjct 1419 GTCAAA-ATACCG-TCAGAAAACAGCATGAAGTCTGCAACTACATCTCCAAGTTCTACTA 1476
Query 1724 GATCAGCTCCTTCTCCGGGATCAGGTGGTAATGTTTCTAAAGATGGACAGCAGCGAAATG 1783
||||||| || || || ||| |||||| | ||| |||| ||||| ||||| |||||
Sbjct 1477 GATCAGCCCCATCACCTGGAACAGGTGTTTCGGTTGCTAATGATGGGCAGCAAAGAAATA 1536
Query 1784 CTGG 1787
||||
Sbjct 1537 CTGG 1540
Score = 601 bits (325), Expect = 2e-170
Identities = 749/948 (79%), Gaps = 51/948 (5%)
Strand=Plus/Plus
Query 4216 CTTGATCTAAACAAAGTTGATGATTTAACTGATATGAACAGCTACACAATGAA-CAGTAG 4274
||||||||||||||| |||||||| ||||||||||| | |||||||| || ||| |
Sbjct 3897 CTTGATCTAAACAAACTTGATGATCCGACTGATATGAATAATTACACAAT-AAGCAGCGG 3955
Query 4275 TCATCGGCTAGATTCATCTTTTCAGCAGGTTAAATTACCATCGACTGGTGGTCGTAGAGA 4334
||||||| |||| ||||||||||| || | || | | | ||||||||||||||||
Sbjct 3956 TCATCGGGTAGACTCATCTTTTCAACAAG--CAA--A-C-TTTTCTGGTGGTCGTAGAGA 4009
Query 4335 TTTTGATTTAAATGATGGACCTG-TGGGTGATGATGC-AGCTGTTGAGCCATCGATGGTT 4392
|||||||||||| |||||||| | || ||||||| | || ||||||| |||| ||||||
Sbjct 4010 TTTTGATTTAAACGATGGACCCGCTGT-TGATGATTCGAG-TGTTGAGTCATCTATGGTT 4067
Query 4393 CTAAATCAACATTCACGAAGTGGCTTGCCATCACAACCA-TCTCTCTCTGGAATTCGAGT 4451
| | ||||||||| |||| ||||||| ||||||| ||| | |||||||||| || |
Sbjct 4068 TTTACTCAACATTCCCGAAATGGCTTGACATCACAGCCAATGA-TCTCTGGAATAAGAAT 4126
Query 4452 GAATGGCGAAAACATGGCTAG-T---TTCTCAACTTGGTTTCCTGCTGCTAACGCTTATT 4507
|||||| ||| ||||||| || | |||||| |||||||||||||||||||| |||||
Sbjct 4127 GAATGGTGAACACATGGC-AGCTGGCTTCTCATCTTGGTTTCCTGCTGCTAACAATTATT 4185
Query 4508 CAGCTGTGAGCATGCCTCCAATTAT-GCCTGAGAGAGGTGATCAGCCTTTTCCAATGATT 4566
|||| |||| || |||| || | | |||||| |||| ||||| ||||||||| | |||
Sbjct 4186 CAGCAATGAGTATTCCTC-AAGTCTTGCCTGATCGAGGCGATCACCCTTTTCCAGTTATT 4244
Query 4567 GCCA-CTCGTGGCCCACAGAGAATGTTGGGTCCAACAACTGGTGTTTCCTCATTTTCCCC 4625
| | | ||| |||||||| ||| ||||||||||| | || ||||| |||||| | ||
Sbjct 4245 ACAAGCAA-TGGACCACAGAGGATGGTGGGTCCAACATCCGGAGTTTCATCATTTACACC 4303
Query 4626 TGA-AGGGTACAGGGGTCCTGTTTTG-TCGTCGTCTCCAGCCA-TGCCATTTCAGTCCAC 4682
||| | | ||||| || || |||||| | || ||||| || | | |||| | | ||||
Sbjct 4304 TGATATG-TACAGAGGCCCAGTTTTGCTA-TCTTCTCCGGC-AGTTTCATTCCCGCCCAC 4360
Query 4683 AACGTTCCAGTATCCTGTC-TTTCCTTTTGGAAATAGCTTCCC-CGTTACCCCAGCGAAT 4740
| | || |||||||| | | ||||||||||||| || || || | || || |||| |||
Sbjct 4361 AGCATTTCAGTATCCCG-CGTTTCCTTTTGGAACCAGTTTTCCTC-TTGCCTCAGCAAAT 4418
Query 4741 TTCCCTGG-TGCTTCTACAGCACACATGGATTCTTCTTCAAGCGGGAGAGCTTACTT-CC 4798
|| || || | |||| || || ||||||| ||||| ||||| || || |||| || ||
Sbjct 4419 TTTCCAGGCT-CTTCGACTCCATACATGGACTCTTCATCAAGTGGCAG-GCTTTGTTTCC 4476
Query 4799 CCGGTGTCAACTCTCAAATATTGGGTCCTGGAGTT-CCAGTTCCGTCTAATTACCCAAGA 4857
|| |||||||||||||||||||||||| |||||| ||| | ||||||||||| |||||
Sbjct 4477 CCCCTGTCAACTCTCAAATATTGGGTCCAGGAGTTGCCA-TCCCGTCTAATTATCCAAGG 4535
Query 4858 CCTTATATAGTTGGCCTCCCAAACGGTGGTAGCAATGGCGGTGTTTTGGACAATAGC-GC 4916
|||||| | || ||||||||||||| |||||||| || |||| |||||| | | |
Sbjct 4536 CCTTATGTTGTAAACCTCCCAAACGGT---AGCAATGGAGGAGTTTCGGACAACAACAGT 4592
Query 4917 G-AAA-TGGTTTAGGTCAGGACTTGACTTAAATTCTGGTCCTGGAGGTCATGAAACAGA- 4973
| ||| |||||||| ||||| |||||||||||||| || || ||||| |||||||| ||
Sbjct 4593 GCAAAATGGTTTAGATCAGGTCTTGACTTAAATTCCGGACCAGGAGGGCATGAAACTGAT 4652
Query 4974 GGGAAGAGACGAATCAACACTTGTATCAAGG-CAATTATCTTCATCTGCTTCCGTACCGT 5032
|||| |||| ||| || |||||||| ||| | ||||||||||| || | |||| |||| |
Sbjct 4653 GGGA-GAGATGAAGCAGCACTTGTA-CAAAGACAATTATCTTCCTCAGGTTCCTTACCTT 4710
Query 5033 CGAAGGAGGATCAAGCAAGAATGTATCAAATGTCAGGTGGTGT-TCTGAAGAGGAAAGAA 5091
||| || ||||| |||||||||||||| |||||||||||| | ||| |||||||| |||
Sbjct 4711 TGAAAGATGATCAGGCAAGAATGTATCAGATGTCAGGTGGT-TCTCTCAAGAGGAAGGAA 4769
Query 5092 CCGGAAGGAGGATGGGATGGATATAGGCAGTCCTTATAACAATAACAA 5139
|| || || |||||||||||||||| ||| |||| || |||||||||
Sbjct 4770 CCAGATGGTGGATGGGATGGATATAAGCAATCCTCATGGCAATAACAA 4817
Score = 252 bits (136), Expect = 2e-65
Identities = 250/304 (82%), Gaps = 11/304 (4%)
Strand=Plus/Plus
Query 3839 TTCCTGCATCCATTACTGTTGCTGCTGCCGTCAAAGG-TCCGTTTGTTCCACCTGAAGAT 3897
|||||||||||||||||||||||||||| | |||||| | |||||||||||| ||| |||
Sbjct 3580 TTCCTGCATCCATTACTGTTGCTGCTGCTG-CAAAGGGTGCGTTTGTTCCACGTGACGAT 3638
Query 3898 CTGTTGAGATATAAAGGGGCTGTTGGTTGGAGAGGATCTGCTGCCACTAGTGCCTTCCGC 3957
|||||||| | |||| ||||||| |||||||||||||| |||||||| ||||||||
Sbjct 3639 TTGTTGAGAAACAAAGCAACTGTTGGCTGGAGAGGATCTGCCGCCACTAGCGCCTTCCGG 3698
Query 3958 CCAGCTGAGCCAAGAAAAGCT-CAGGATGTGTT---ACTGAG-CATTAACAATACCTCTA 4012
|||||||||||||||||| | ||||| ||| | ||| || ||| || ||| |||
Sbjct 3699 CCAGCTGAGCCAAGAAAAA-TGCAGGAGGTGGTGCCACT-AGGCATGAATAATGTGTCTT 3756
Query 4013 CATCTGATGCATCTACTTCTGCTGGCAAACAGACAAGGACGTTTCTGGATTTTGACTTGA 4072
| || ||||| ||||| | |||||||| || |||| ||||||| |||| |||||| | |
Sbjct 3757 CGTCGGATGCTTCTACAACCGCTGGCAAGCAAACAAAGACGTTTTTGGACTTTGACCTAA 3816
Query 4073 ATGTACCTGACGAGAGAG-TCCTTGAAGATTTGGCTTCCCAAAGATCTGGAAATCCCACA 4131
||||||| || ||||||| || |||||||| | |||||||||||||| | |||||||||
Sbjct 3817 ATGTACCCGATGAGAGAGCTC-TTGAAGATCTAGCTTCCCAAAGATCAGCCAATCCCACA 3875
Query 4132 AATT 4135
||||
Sbjct 3876 AATT 3879
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 198774703779
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5