BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G48300.1
Length=1452
Score E
Sequences producing significant alignments: (Bits) Value
Ahg897677 jgi|Araly1|897677|Al_scaffold_0005_1643 2141 0.0
Ahg485191 jgi|Araly1|485191|fgenesh2_kg.5__1183__AT3G48310.1 1208 0.0
Ahg937586 jgi|Araly1|937586|scaffold_501777.1 1127 0.0
Ahg485189 jgi|Araly1|485189|fgenesh2_kg.5__1181__AT3G48280.1 1018 0.0
Ahg485188 jgi|Araly1|485188|fgenesh2_kg.5__1180__AT3G48270.1 957 0.0
> Ahg897677 jgi|Araly1|897677|Al_scaffold_0005_1643
Length=1443
Score = 2141 bits (1159), Expect = 0.0
Identities = 1358/1453 (93%), Gaps = 17/1453 (1%)
Strand=Plus/Plus
Query 1 ATGATACTTTTCTTATGCTTAATAATATTGTTCATCATAACCATTCTCTTCTTCAAAAAA 60
|||||||||||||||||| | || ||||| | ||||| ||||||||| ||||||||||
Sbjct 7 ATGATACTTTTCTTATGC-T--TAGTATTG-T--TCATAGCCATTCTCTACTTCAAAAAA 60
Query 61 CATAAGACAGTGAACAAAATCATCAACTTTCCATCCCCACCGAGACTTCCGTTGATCGGA 120
|| |||||| | | |||| | | |||||||||||||||||||| ||||||||||||
Sbjct 61 CAGAAGACA-T---C--GATCA-C-A-TTTCCATCCCCACCGAGACTACCGTTGATCGGA 111
Query 121 AATCTTCATCAGCTTAGCCAACATCCTCACCGATCACTCTGCTATCTCAGCCACCGTTAC 180
|| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||
Sbjct 112 AACCTTCATCAGCTCGGCCAACATCCTCACCGATCACTATGCTATCTCAGCCACCGTTAC 171
Query 181 GGTCCACTCATGCTCCTCCACTTCGGAAGTGTCCCCGTTATTGTAGCCTCTACAGCAGAA 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 172 GGTCCTCTCATGCTCCTCCACTTCGGAAGTGTCCCCGTTATTGTAGCCTCTACCGCAGAA 231
Query 241 GCAGCTCGAGACGTTTTAAAGACGCATGATCGCGTTTTTGCTAGCCGTCCACGGTCAAAA 300
|| || ||||| ||||||||||||||||| |||||||||| |||||||||||||| |||
Sbjct 232 GCGGCAAGAGACATTTTAAAGACGCATGATAGCGTTTTTGCAAGCCGTCCACGGTCGAAA 291
Query 301 ATCTTCGAAAAGCTTCTTTACAAGAGCCGTAATATGGCCTCAGCTCCTTATGGAGAGTAT 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 292 ATCTTCGAAAAGCTTCTTTACAACAGCCGTAATATGGCCTCAGCTCCTTATGGAGAGTAT 351
Query 361 TGGCGACAAATGAAGAGTGTTAGTGTTCTCCATCTCCTCAGCAACAAAATGGTACGGTCC 420
||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 352 TGGAGACAAATGAAGAGTGTTAGTGTTATCCATCTCCTCAGCAACAAAATGGTACGGTCT 411
Query 421 TTTCAAGACGTGAGACAAGAAGAGATCACTCTGATGATGGAAACGATCCGTAAATCGAGT 480
|||| ||| |||||| ||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 412 TTTCGAGAAGTGAGAGAAGAAGAGATCACTCTGATGATGGAAAAGATCCGAAAATCGAGT 471
Query 481 TCTAAACCGGTAAATCTTAGCAAGATCTTGTCGAGTTTAACTAACGATGTTATATGTAGA 540
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 472 TCTAAACCGGTAAATCTTAGCAAGATCTTGTCAAGTTTAACTAACGATGTTATATGTAGA 531
Query 541 GTAGCTTTGGGACGGAAATATGGTGTTGGAACAGATTTTAAAGAGTTAATAGACAGGCTC 600
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 532 GTCGCTTTGGGACGGAAATACGGTGTTGGAACAGATTTTAAAGAGTTAATAGACAGACTC 591
Query 601 ATGAGGCAACTTGGTACGTTTACTATCGGGAGTTATGTACCGTGGCTTGCGTGGACTGAT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 ATGAGGCAACTTGGTACGTTTACTATCGGGAGTTATGTACCGTGGCTTGCGTGGACTGAT 651
Query 661 TGGGTCAGCGGTTTGGAGGCTCGACTGGAAAAGACCGCTAATGATTTTGATAAGCTATTG 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 652 TGGGTCAGCGGTTTGGAGGCTCGACTGGAAAAGACCGCTAATGATTTTGATAAGCTCTTG 711
Query 721 GAGAGAATTGTGCAGGATCATGAAGATGGAGACGGCGACAAGACTGATTTTGTGGATGTA 780
|||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||
Sbjct 712 GAGAGAATTGTGCAGGATCATGAAGATGGAGACGGCAATAAGACTGATTTTGTCGATGTA 771
Query 781 TTGCTCGCAGCTCAGAGAGACAAGAGTTTCGGGTTCGATATTGACCGGTTAAGCATAAAA 840
| ||||||||||||||||| |||||| ||||||| ||||| |||||||||||||||||
Sbjct 772 CTACTCGCAGCTCAGAGAGAGAAGAGTGTCGGGTTGGATATCGACCGGTTAAGCATAAAG 831
Query 841 GCAATCGTCTTGGATGCTTTTGTGGGTGGTACAGACACATCCTCCACGCTTGTGGAATGG 900
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 832 GCAATCGTCTTGGATGCTTTTGTGGGTGGTACAGACACATCCTCCACACTTGTGGAATGG 891
Query 901 GAAATGACAGAGCTTCTACGACACCCAACGTGTCTaaaaaaaCTTCAAGAGGAAGTCCGT 960
|||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 892 GAAATGACAGAGCTTCTACGACACCCAACGTGTCTAAAAAGACTTCAAGAAGAAGTCCGT 951
Query 961 ACGATTTGTAAG-GGAAAATCAAGTGTGTCTGAAGATGACATTCAAGGAATGGAATACTT 1019
|| ||||||| | || ||||||||||| || |||||||||||| ||| |||| |||||||
Sbjct 952 ACAATTTGTA-GTGGCAAATCAAGTGTATCAGAAGATGACATTAAAGAAATGAAATACTT 1010
Query 1020 AAAAGCTGTGGTCAAAGAGGCACTCAGGCTACATCCACCAGTTCCATTGATGGTTCCTCA 1079
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1011 AAAAGCTGTGGTCAAAGAGGCACTAAGGCTACATCCTCCAGTTCCATTGATGGTTCCTCA 1070
Query 1080 TCAATCAACACAAGATGTTAGGTTAAGAGATAACCATATACCTGCCGGTACGCAGGTTAT 1139
|||||| | ||||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct 1071 CCAATCATTAGAAGATGTCAGGTTAAGAGATAACCATATACCGGCGGGTACGCAGGTTAT 1130
Query 1140 AGTCAATCTTTGGGCCGTCGGGAGAGAGGCTGCGACGTGGGGACCAGATGCGAATGAGTT 1199
||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1131 AGTCAATCTTTGGGCGGTCGGGAGAGAGGCTGCAACGTGGGGACCAGACGCGAATGAGTT 1190
Query 1200 TAGACCGGAGAGGCATTTAGAGTCGCCTTCTGATTTCCGGGGTCAGGATTTTGAGCTGAT 1259
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1191 TAGACCGGAGAGGCATTTAGAGTCGTCTTCTGATTTCCGGGGTCAGGATTTTGATCTGAT 1250
Query 1260 TCCTTTTGGAGCAGGGAGAAGGATGTGTCCAGGAATATCATTTGCTGTGGTGCTGAATGA 1319
||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1251 TCCGTTCGGAGCAGGGAGAAGGATGTGTCCAGGAATATCATTTGCTGTGGTGTTGAATGA 1310
Query 1320 GGTAGTCTTGGCTAACTTAGTGCATGGGTTTGATTGGCAATCTATAGACGATGAGACCGA 1379
||| || |||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1311 GGTGGTTTTGGCTAACTTAGTGCATGGGTTTGACTGGCAATCTATAGAAGATGAGACCGA 1370
Query 1380 TGTTGCTGAATCAATCGGTAGTGTGATTCGCCGCATGCACCCTCTTTACGTCATTCCATC 1439
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||| || |
Sbjct 1371 TGTTGCTGAATCAATCGGTAGTGTGATTCGTCGCATGTACCCTCTTTACGTCATTGCAAC 1430
Query 1440 ATCTACTACTTGA 1452
|||||||||||||
Sbjct 1431 ATCTACTACTTGA 1443
> Ahg485191 jgi|Araly1|485191|fgenesh2_kg.5__1183__AT3G48310.1
Length=1602
Score = 1208 bits (654), Expect = 0.0
Identities = 1226/1493 (82%), Gaps = 76/1493 (5%)
Strand=Plus/Plus
Query 1 ATGATACTT-TTCTTATGCTTAATAATATTGTTCATCATAACCATTCTCTTCTTCAAAAA 59
||||||||| | | || |||||||||| | || || | ||||| ||||| ||||||||
Sbjct 105 ATGATACTTCTGC-TAAGCTTAATAAT-CT-TT-AT--T-ACCATCCTCTTTTTCAAAAA 157
Query 60 ACATAAGACAGTGAACAAAATCATCA-ACTTTCCATCCCCACCGAGACTTCCGTTGATCG 118
||| || | || ||| |||| || || || | | || ||||||||| ||||||||||||
Sbjct 158 ACAGAAAAGAGGGAAGAAAAGCAACACACCAT-CGTCACCACCGAGATTTCCGTTGATCG 216
Query 119 GAAATCTTCATCAGCTTAGCCAACATCCTCACCGATCACTCTGCTATCTCAGCCACCGTT 178
|||| |||||||| ||| ||| || |||||||||||||| | || ||| ||||||||||
Sbjct 217 GAAACCTTCATCAACTTGGCCGCCACCCTCACCGATCACTATTCTCTCTGAGCCACCGTT 276
Query 179 ACGGTCCACTCATGCTCCTCCACTTCGGAAGTGTCCCCGTTATTGTAGCCTCTACAGCAG 238
||||||| ||||||||||||||||| ||| |||| || ||| |||||| |||| | ||||
Sbjct 277 ACGGTCCTCTCATGCTCCTCCACTTTGGACGTGTACCTGTTCTTGTAGTCTCTTCCGCAG 336
Query 239 AAGCA--GCTCGAGACGTTTT-AAAGACGCATGATCGCGTTTTTGCTAGCCGTCCACGGT 295
| || |||||||| |||| ||| |||||||| |||||||||||||| ||||||| ||
Sbjct 337 -A-CATGGCTCGAGATATTTTGAAA-ACGCATGACCGCGTTTTTGCTAGTCGTCCACAGT 393
Query 296 CAAAAATCTTCGAAAAGCTTCTTTACAAGAG-CCGTAATATGGCCTCAGCTCCTTATGGA 354
|||||||||| || |||||| |||| || | |||| || |||||| |||||| ||||||
Sbjct 394 CAAAAATCTTTGAGAAGCTTTTTTATAA-CGCCCGTGATGTGGCCTTAGCTCCGTATGGA 452
Query 355 GAGTATTGGCGACAAATGAAGAGTGT-TAGTGTTCTCCATCTCCTCAGCAACAAAATGGT 413
|| |||||| | ||||||||||| || | | || ||||| ||||||| ||||||||||||
Sbjct 453 GAATATTGGAGGCAAATGAAGAGCGTGT-GCGTCCTCCAGCTCCTCACCAACAAAATGGT 511
Query 414 AC-GGTCCTTTC-AAGACGTGAGACAAGAAGAGATCACTCTGATGATGGA-AACGATCC- 469
| ||||||| | || ||||||||||||||||||||| |||||||||||| || |||||
Sbjct 512 -CAGGTCCTTCCGAA-ACGTGAGACAAGAAGAGATCAGTCTGATGATGGAGAA-GATCCA 568
Query 470 GTAAATCGAGTTCTAAACCGGTAAATCTTAGCAAGATCTTGTCGAGTTTAACTAACGATG 529
| ||||| |||||| | ||| ||||| ||| || ||||| |||||||||||||||||
Sbjct 569 G-AAATCAAGTTCTTTGCGGGTGAATCTAAGCGAGCTCTTGGGGAGTTTAACTAACGATG 627
Query 530 TTATATGTAGAGTAGCTTTGGGACGGAAATATGGTGTTGGAACAGATTTTAAAGAGTTAA 589
| |||| ||| || ||||||||||||||||| | ||||| || |||||||| |||||||
Sbjct 628 TGATATCTAGGGTTGCTTTGGGACGGAAATACAGCGTTGGTACGGATTTTAAGGAGTTAA 687
Query 590 TAGACAGGCTCATGAGGCAACTTGG-TACGTTTACTATCGGGAGTTATGTACCGTGGCTT 648
| || ||||||| ||||| ||| || | ||||| | | |||| |||| |||||||||||
Sbjct 688 TGGAAAGGCTCACGAGGCTACTGGGCGA-GTTTAGTGTGGGGACTTATATACCGTGGCTT 746
Query 649 GCGTGGACTGATTGGGTCAGCGGTTTGGA-GGCTCGA-CTGGAAAAGAC-CGCTAATGAT 705
|| |||| ||| ||| |||| |||||||| || | | || ||||||| || ||||||
Sbjct 747 GCATGGATTGACTGGATCAGTGGTTTGGATGG-AC-AGCTAAAAAAGACAGGC-AATGAT 803
Query 706 TTTGAT-AAGCTATTGGAGAGAA-TTGTGCAGGATCATGAAGATGGAGACGGCGAC-AA- 761
||||| || | ||||||| || |||| || ||||||| |||||| ||| | ||| ||
Sbjct 804 CTTGATGAA-TTCTTGGAGA-AAGTTGTCCAAGATCATGTAGATGGCGAC-G-GACAAAG 859
Query 762 GACTGATTTTGTGGATGTATTGCTCGCAGCTCAGAGAGACAAGAG-TTTCGGGTTCGATA 820
|||||||||||||||||| ||||||||| ||||||||| ||||| || ||||| || |
Sbjct 860 GACTGATTTTGTGGATGTGTTGCTCGCAATTCAGAGAGAGAAGAGCGTT-GGGTTTGAAA 918
Query 821 TTGACCGGTTAAGCATAAAAGCAATCGTCTTGGATGCTT-TTGTGGGTGGTACAGACACA 879
| ||||||||||||||||| || ||||||||||||| || |||| |||||||| || |||
Sbjct 919 TCGACCGGTTAAGCATAAAGGCTATCGTCTTGGATG-TTGTTGTTGGTGGTACGGATACA 977
Query 880 TCCTCCACGCTTGTGGAATGGGAAATGACAGAGCTTCTACGACACCCA-ACGTGTCTaaa 938
|| | | ||| |||| |||| ||||||||||||||| | | |||| | |||||| ||
Sbjct 978 TCGTATGCTCTTATGGAGTGGGCAATGACAGAGCTTCTTCTTCGCCCAGA-GTGTCTGAA 1036
Query 939 aaaaCTTCAAGAGGAAGTCCGTACGATTTGTAAGGGAAAATCAAGTGTGTCTGAAGATGA 998
| ||| || || ||||||||||||||||||||||| || | ||||| || ||||||||
Sbjct 1037 CAGACTCCAGGAAGAAGTCCGTACGATTTGTAAGGGTAATTTGAGTGTATCAGAAGATGA 1096
Query 999 CATTCAAGGA-ATGGAA-TACTTAAAAGCTGTGGTCAAAGAGGCACTCAGGCTACATCCA 1056
|| |||| || || ||| ||||||||||||||| ||| |||| ||||||||||| ||||
Sbjct 1097 CA-TCAAAGACAT-GAACTACTTAAAAGCTGTGATCAGAGAGACACTCAGGCTATATCCT 1154
Query 1057 CCAGTTCCATTGATGGTTCCTCATC-AATCAACACAAGATGTTAGGTTAAGAGATAACCA 1115
||| ||||||||||||||||||| | |||||||||||||||| || ||| ||||| ||||
Sbjct 1155 CCACTTCCATTGATGGTTCCTCA-CGAATCAACACAAGATGTCAGATTAGGAGATTACCA 1213
Query 1116 TATACCTGCCGGTACGCAGGTTATAG-TCAAT-CTTTGGGCCG-TCGGGAGAGAGGCTGC 1172
||||||| |||||| ||||| || | ||||| | ||||| || |||||||||||| |||
Sbjct 1214 CATACCTGTCGGTACACAGGTAAT-GATCAATGC-TTGGG-CGATCGGGAGAGAGGTTGC 1270
Query 1173 GACGTGGGGACCAGATGCGAATGAGTTTAGACCGGAGAGGCATTTAGAGTCGCCTTCTGA 1232
|||||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||
Sbjct 1271 AACGTGGGGACCAGACGCGGAGGAGTTTAGACCGGAGAGGCATTTAGAGTCGTCTTCTGA 1330
Query 1233 TTTCCGGGGTCAGGATTTTGAGCTGATTCCTTTTGGAGCAGGGAGAAGGATGTGTCCAGG 1292
|||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||
Sbjct 1331 TTTCCGGGGTCAGGATTTTGAGTTGATTCCGTTCGGAGCAGGGAGAAGGATGTGTCCAGG 1390
Query 1293 AATATCATTTGCTGTGGTGCTGAATGAGGTAGTCTTGGCTAACTTAGTGCATGGGTTTGA 1352
|||||||||||||||||| |||||||||| || |||||||||||||||||| ||| |||
Sbjct 1391 AATATCATTTGCTGTGGTATTGAATGAGGTGGTTTTGGCTAACTTAGTGCATCGGTATGA 1450
Query 1353 TTGG------C-A----ATC-TATAGACGATGAGACCGATGTTGCTGAATCAATCGGTAG 1400
|||| | | ||| || ||| ||| | ||| ||||||||||||||| |||||
Sbjct 1451 TTGGAGATTACCAGTTGATCATACAGAAGATCAAACCAATGTTGCTGAATCAACCGGTA- 1509
Query 1401 TGT-GATTCGCCGCATGCACCCTCTTTACGTCATTCCATCATCTACTACTTGA 1452
|| ||||| ||| | |||||| |||| |||| |||||||||||||||||
Sbjct 1510 TGGCGATTCACCGTTTATTCCCTCTCTACGCCATTGCATCATCTACTACTTGA 1562
> Ahg937586 jgi|Araly1|937586|scaffold_501777.1
Length=1522
Score = 1127 bits (610), Expect = 0.0
Identities = 1218/1500 (81%), Gaps = 87/1500 (6%)
Strand=Plus/Plus
Query 1 ATGATACTTTTCTTATGCTTAATAATATTGTTCATCATAACCATTCTCTTCTTCAAAAAA 60
||||||||| || | |||| |||||| | || || | |||| ||||||||| | |||
Sbjct 42 ATGATACTTCTCATGTGCTCAATAAT-CT-TT-AT--T-ACCACTCTCTTCTTTATAAAC 95
Query 61 CATAAGAC-AGTGAACAAAATCATCA-ACTTTCCATCCCCACCGAGACTTCCGTTGATCG 118
|| || | || ||| |||| || || || ||| || |||||||||||||| ||||| |
Sbjct 96 CAAAATTCAAG-GAAGAAAAGCAACACAC-CTCCGTCACCACCGAGACTTCCTTTGATAG 153
Query 119 GAAATCTTCATCAGCTTAGCCAACATCCTCACCGATCACTCTGCTATCTCAGCCACCGTT 178
|||| ||||| ||||| ||| || |||||||||||||| |||| ||||||||||||||
Sbjct 154 GAAACCTTCACCAGCTCGGCCGTCACCCTCACCGATCACTATGCTCTCTCAGCCACCGTT 213
Query 179 ACGGTCCACTCATGCTCCTCCACTTCGGAAGTGTCCCCGTTATTGTAGCCTCTACAGCAG 238
| ||||| || |||||||||||||| || ||||||| ||| |||||| |||| | || |
Sbjct 214 ATGGTCCTCTTATGCTCCTCCACTTGGGCCGTGTCCCGGTTCTTGTAGTCTCTTCCGCTG 273
Query 239 AAGCAGCTCGAGACGTTTTAAAGACGCATGATCGCGTTTTTGCTAGCCGTCCACGGTC-A 297
| | |||||||||||||| |||||||||||||| |||||||||||||||||| |||| |
Sbjct 274 ACGTGGCTCGAGACGTTTTGAAGACGCATGATCGAGTTTTTGCTAGCCGTCCATGGTCTA 333
Query 298 AAAATCTTCGAAAAGCTTCTTTAC-AAGAGCCGTAATATGGCCTCAGCTCCTTATGGAGA 356
||||| ||| |||||||||||| | | | ||| || |||||| |||||||||||||||
Sbjct 334 AAAAT-ACCGAGAAGCTTCTTTACGACG-GGCGTGATGTGGCCTTAGCTCCTTATGGAGA 391
Query 357 GTATTGGCGACAAATGAAGAGTGT-TAGTGTTCTCCA-TCTCCTCAGCAACAAAATGGTA 414
||| ||| | |||||||||||||| | | || || || | | ||||||||||||||||||
Sbjct 392 GTACTGGAGGCAAATGAAGAGTGTGT-GCGTCCT-CAGTTTGCTCAGCAACAAAATGGTA 449
Query 415 CGGTCCTTTCAAGACGTGAGACAAGAAGAGATCACTCTGATGATGGA-AACGATCCGTAA 473
|| ||||||| ||| ||||||||| ||||||||| ||| |||||||| || |||| | |
Sbjct 450 CGATCCTTTCGAGATGTGAGACAACAAGAGATCAGTCTTATGATGGAGAA-GATCGGGCA 508
Query 474 ATCGAGTTCTAAACCGGTAAATCTTAGCAAGATCTTGTCGAGTTTAACTAACGATGTTAT 533
|||||||||| | ||| ||||| ||| |||||||| |||||||||| || ||||| ||
Sbjct 509 ATCGAGTTCTTTGCAGGTGAATCTAAGCGAGATCTTGGCGAGTTTAACGAATGATGTGAT 568
Query 534 ATGTA-GAGTAGCTTTGGGACGGAAATATGGTGTTGGAACAGATTTTAAAGAGTTAATAG 592
||||| || | |||||||||||||||||||| | || |||||||||||| |||||||| |
Sbjct 569 ATGTAGGA-TTGCTTTGGGACGGAAATATGGCGGTGAAACAGATTTTAAGGAGTTAAT-G 626
Query 593 -ACAGGCTCATGAGGCAACTT-GGTACGTTTACTATCGGG-AGTTATGTACCGTGGCTTG 649
| ||||| | |||| || || || ||| | | ||| | | ||||||| |||||||
Sbjct 627 AAGAGGCTTACAAGGC-TTTTAGGGGCGGTTAGTGT-GGGAAATCATGTACCATGGCTTG 684
Query 650 CGTGGACTGATTGGGTCAGCGGTTTGGA-GGCTCGA-CTGGAAAAGACCG-CTAATGATT 706
| |||| ||||||| || |||||||||| || || | || ||||||| || ||||||
Sbjct 685 CATGGATTGATTGGCTCTGCGGTTTGGATGG-TC-AGCTAGAAAAGA-CGAGAAATGATC 741
Query 707 TTGATAAGCTAT-TGGAGAGAATTGTGCAGGATCATGAAGATG-GAGACGGCGACAAGAC 764
||||| || | | | |||||| ||||||| ||||||| ||||| | |||| || | |||
Sbjct 742 TTGATGAG-TTTCTTGAGAGAGTTGTGCAAGATCATGTAGATGTCA-ACGGAGATAGGAC 799
Query 765 TGATTTTGTGGATGTATTGCTCG-CAGCTCAGAGAGACAAGAGTTTCGGGTTCGATATTG 823
|||||| || ||||||||||||| || ||||||||| |||||| | ||||| || || |
Sbjct 800 TGATTTCGTCGATGTATTGCTCGCCA-TTCAGAGAGAGAAGAGTGTGGGGTTTGAGATCG 858
Query 824 ACCG-GTTAAGCATAAAAGCAATCGTCTTGGATGCTTTTGTGGGTGGTACAGACACATCC 882
|||| | | |||||||| |||||| |||||||| ||||||||||||||| ||||||||
Sbjct 859 ACCGCG-TCAGCATAAAGGCAATCATCTTGGATATTTTTGTGGGTGGTACGGACACATCG 917
Query 883 TCCACGCTTGTGGAATGGGAAATGACAGAGCTTCTACGA-CACCCA-ACGTGTCTaaaaa 940
| ||| ||| ||||||||| ||||||||||||| ||| | |||||| | |||||| || |
Sbjct 918 TACACACTTATGGAATGGGTAATGACAGAGCTTTTAC-ATCACCCAGA-GTGTCTGAAGA 975
Query 941 aaCTTCAAGAGGAAGTCCGTACGATTTGTAAGGGAAAATCAAGTGTGTCTGAAGATGACA 1000
||||||||| ||||||||||||||||||||||| ||||||||||| || ||||| ||||
Sbjct 976 GACTTCAAGAAGAAGTCCGTACGATTTGTAAGGGCAAATCAAGTGTATCAGAAGAAGACA 1035
Query 1001 TTCAAGGA-ATGGAA-TACTTAAAAGCTGTGGTCAAAGAGGCACTCAGGCTACATCCACC 1058
|| || || || ||| ||||||||||||||| |||||||| || | ||||||||||| ||
Sbjct 1036 TT-AAAGACAT-GAACTACTTAAAAGCTGTGATCAAAGAGACAATGAGGCTACATCCTCC 1093
Query 1059 AGTTCCATTGATGGTTCCTCATCAATCAACACAAGATGTTAGGTTAAGAGA-TAACCATA 1117
| |||||||||||||||||||| |||||||||||||||||| |||||||| | |||| |
Sbjct 1094 ACTTCCATTGATGGTTCCTCATGAATCAACACAAGATGTTAAATTAAGAGACT-ACCACA 1152
Query 1118 TACCTGCCGGTAC-GCAGGTTATAG-TCAAT-CTTTGGGCCG-TCGGGAGAGAGGCTGCG 1173
|||| ||||| || | |||||| | ||||| | |||| || |||||||||||||||||
Sbjct 1153 TACCAGCCGGAACAG-TGGTTAT-GATCAATGC-ATGGG-CGATCGGGAGAGAGGCTGCG 1208
Query 1174 ACGTGGGGACCAGATGCGAATGAGTTTAGACCGGAGAGGCATTT-AGAGTCGCCT-TCTG 1231
|| ||||||||||| || | ||||||||||||||||| ||||| | | || || | ||
Sbjct 1209 ACATGGGGACCAGACCCGGAGGAGTTTAGACCGGAGAGACATTTCA-ATTCTTCTGT-TG 1266
Query 1232 ATTTCCGGGGTCAGGATTTTGAGCTGATTCCTTTTGGAGCAGGGAGAAGGATGTGTCCAG 1291
||||||||||||||||||||||||||||||| ||||| ||||||||||| || || || |
Sbjct 1267 ATTTCCGGGGTCAGGATTTTGAGCTGATTCCGTTTGGGGCAGGGAGAAGAATATGCCC-G 1325
Query 1292 G-AATATCATTTGCTGTGGTGCTGAATGAGGTAGTCTTGGCTAACTTAGTGCATGGGTTT 1350
| |||||||||||||||||| ||||||| | ||| |||||||||||||||||| |||||
Sbjct 1326 GCAATATCATTTGCTGTGGTATTGAATGAAGAAGTTTTGGCTAACTTAGTGCATCGGTTT 1385
Query 1351 GATTGGCA-A-T-C----T-A-T--A-G-ACGATGAGACCGATGTTG---CTGAATCAAT 1394
|||||| | | | | | | | | | | ||| | || | ||||| |||||||||
Sbjct 1386 GATTGG-AGACTACCGGATGAATCTACGGAAGATCAAACAGGTGTTGTTGCTGAATCAAC 1444
Query 1395 CGGTAGTGTG--ATTCGCCGCATGCACCCTCTTTACGTCATTCCATCATCTACTACTTGA 1452
||| ||| || |||| ||||||| ||||||||| | |||| |||||||||||||||||
Sbjct 1445 CGG-AGT-TGCCATTCACCGCATGTTCCCTCTTTATGCCATTGCATCATCTACTACTTGA 1502
> Ahg485189 jgi|Araly1|485189|fgenesh2_kg.5__1181__AT3G48280.1
Length=1617
Score = 1018 bits (551), Expect = 0.0
Identities = 1122/1391 (81%), Gaps = 65/1391 (5%)
Strand=Plus/Plus
Query 1 ATGATACTTTTCTTATGCTTAATAATATTGTTCATCATAACCATTCTCTTCTTCAAAAAA 60
||||||||| |||| || | ||| | | | || |||| |||||||||||||| ||||||
Sbjct 16 ATGATACTTCTCTTGTGGTCAAT-A-A-T-TT--TCATGACCATTCTCTTCTT-AAAAAA 68
Query 61 CATAAG-ACAGT--GAACAAA-ATCATCA-ACTTTCCATCCCCACCGAGACTTCCGTTGA 115
| ||| ||| ||| ||| | | | || ||| || |||||| ||||||||||||
Sbjct 69 -A-AAGTTGAGTGGGAAGAAAGGT-AAGACAC-CTCCGTCACCACCGGGACTTCCGTTGA 124
Query 116 TCGGAAATCTTCATCAGCTTAGCCAACATC-CTCACCGATCACTCTGCTATCTCAGCCAC 174
||||||| ||||||||||| ||| || | ||||||||||||| |||| |||||| | |
Sbjct 125 TCGGAAACCTTCATCAGCTCGGCCGTCA-CACTCACCGATCACTATGCTCTCTCAGTCGC 183
Query 175 CGTTACGGTCCACTCATGCTCCTCCACTTCGGAAGTGTCCCCGTTATTGTAGCCTCTACA 234
||||||||||| || |||||||| ||||| || ||||||||||| || ||| |||| |
Sbjct 184 CGTTACGGTCCTCTTATGCTCCTTCACTTAGGCCGTGTCCCCGTTCTTATAGTCTCTTCC 243
Query 235 GCAGAAGCA--GCTCGAGACGTTTTAAAGACGCATGATCGCGTTTTTGCTAGCCGTCCAC 292
|| | | || |||| ||| | || |||||||| || | | ||| || | ||| ||||
Sbjct 244 GC-GGA-CATGGCTCAAGAAATCTTGAAGACGCACGACCAAGCTTTCGCAAACCGCCCAC 301
Query 293 GGTCAAAAATCTTCGAAAAGCTTCTTTACAAGAGCCGTAATATGGCCTCAGCTCCTTATG 352
|||||||| ||| | | |||||||||||||| | || || ||||||||||||||||||
Sbjct 302 GGTCAAAACTCTCCCAGAAGCTTCTTTACAACAATCGCGATGTGGCCTCAGCTCCTTATG 361
Query 353 GAGAGTATTGGCGACAAATGAAGAG-TGTTAGTG-TTC-TCCATCTCCTCAGCAACAAAA 409
||||||||||| | ||||||||| | || | ||| | | |||||| | ||||||||||
Sbjct 362 GAGAGTATTGGAGGCAAATGAAG-GCTG-T-GTGCACCATTCATCTCTTAAGCAACAAAA 418
Query 410 TGGTACGGTCCTTTCAAGACGTGAGACAAGAAGAGATCACTCTGATGATGGA-AACGATC 468
||||||| || |||| ||| || ||| ||||||| |||||| |||||||||| || |||
Sbjct 419 TGGTACGATCTTTTCGAGATGTAAGAGAAGAAGAAATCACTTTGATGATGGAGAA-AATC 477
Query 469 CGTAAATCGAGTTCTAAACCGGTAAATCTTAGCAAGATCTTGTCGAGTTTAACTAACGAT 528
|| |||||||||||| ||| | ||| | |||||| ||||| ||||||||||||||||
Sbjct 478 CGGAAATCGAGTTCTTTGCCGTTTAATGTAAGCAAGGTCTTGGAGAGTTTAACTAACGAT 537
Query 529 GTTATATGTAGAGTAGCTTTGGGACGGAAATATGGTGTTGGAACAGATTTTAAAG-AGTT 587
|| ||||||||||| ||||| |||||||||||||||| || ||| || ||| ||| ||||
Sbjct 538 GTGATATGTAGAGTGGCTTTAGGACGGAAATATGGTGGTGAAACTGACTTT-AAGAAGTT 596
Query 588 AATAGACAGGCTCATGAG-GCAACTT-GGTACGTTTACTATCGGGAGTTATGTACCGTGG 645
|| || || || | | | || | || || || |||| ||| ||||||| ||||||||||
Sbjct 597 AACGGATAGACT-AAGCGAGCTA-TTGGGAACATTTAGTATAGGGAGTTTTGTACCGTGG 654
Query 646 CTTGCGTGGACTGATTGGGTCAGCGGTTTGGAGGCTCGA-CTGGAAAAGACCGCTAATGA 704
|||||||||| ||||||| || |||||| ||| |||| | || || |||| | || ||
Sbjct 655 CTTGCGTGGATTGATTGGATCCGCGGTTGGGATGCTC-AGCTAGATAAGATGGGAAAGGA 713
Query 705 TTTTGATAAGC-TATTGGAGAGAA-TTGTGCAGGATCATGAAGATGGAGAC-GGCGACA- 760
| ||||| | | | || |||| || ||||||| |||||||||||||| ||| ||| |
Sbjct 714 TCTTGATGA-CTTCTTTGAGA-AAGTTGTGCAAGATCATGAAGATGGCGACAACCGAGAT 771
Query 761 A-GACTGATTTTG-TGGATGTATTGCTCGCAGCTCAGAGAGACAAGAGTTTCGGGTTCGA 818
| | ||| ||| | |||| ||||||| || | | ||||| |||||| |||||| ||
Sbjct 772 AGGTTTGA-CTTGATCGATGCATTGCTCAAAGTTAAAAGAGAGAAGAGTCCCGGGTTTGA 830
Query 819 TATTGACCG-GTTAAGCATAAAAGCAATCGTC-TTGGATGCTTTTGTGGGTGGTACAGAC 876
|| || || | | |||||||| |||||| | ||||||| ||||||||||||| | |||
Sbjct 831 GATAGAGCGAG-TCAGCATAAAGGCAATC-ACGTTGGATGTTTTTGTGGGTGGTTCCGAC 888
Query 877 ACATCCTCCACGCTTGTGGAATGGGAAATGACAGAGCTTCTACGACACCCA-ACGTGTCT 935
||||| | ||||||| ||||||||| |||||||||||||||||| |||||| | | ||||
Sbjct 889 ACATCGTTCACGCTTTTGGAATGGGCAATGACAGAGCTTCTACGTCACCCAGA-GAGTCT 947
Query 936 aaaaaaaCTTCAAGAGGAAGTCCGTACGATTTGTAAGGGAAAATCAAGTGTGTCTGAAGA 995
|||| ||| ||||| ||||| ||||||||||||||||| ||||||||||| || |||||
Sbjct 948 GAAAAGACTCCAAGAAGAAGTGCGTACGATTTGTAAGGGCAAATCAAGTGTATCAGAAGA 1007
Query 996 TGACATTCAAGGAATGGAATACTTAAAAGCTGTGGTCAAAGAGGCACTCAGGCTACATCC 1055
||||||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1008 TGACATTAAAGAAATGAAATACTTAAAAGCTGTCATCAAAGAGGCACTCAGGCTACATCC 1067
Query 1056 ACCAGTTCCATTGATGGTTCCTCATCAATCAACACAAGATGTTAGGTTAAGAGA-TAACC 1114
||| ||||| |||||| ||||||| |||||||| ||||||| | |||||||| | |||
Sbjct 1068 TCCATTTCCAATGATGGCTCCTCATGAATCAACAGAAGATGTCAAATTAAGAGACT-ACC 1126
Query 1115 ATATACCTGCCGGTACGCAGGTTATAG-TCAAT-CTTTGGGCCGTCGGGAGAGAGGCTGC 1172
| |||||||||||||| || || || | | ||| | ||||||| |||||||||||| |||
Sbjct 1127 ACATACCTGCCGGTACACAAGTGAT-GATGAATGC-TTGGGCCATCGGGAGAGAGGTTGC 1184
Query 1173 GACGTGGGGACCAGATGCGAATGAGTTTAGACCGGAGAGGCATTTAGAGT-CGCCT-TCT 1230
||| ||||||||||| ||| | ||||||| ||||||| |||||||||| | || || | |
Sbjct 1185 GACATGGGGACCAGACGCGGAGGAGTTTAAACCGGAGCGGCATTTAGA-TACGTCTGT-T 1242
Query 1231 GATTTCCGGGGTCAGGATTTTGAGCTGATTCCTTTTGGAGCAGGGAGAAGGATGTGTCCA 1290
|||||||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 1243 GATTTCCGAGGTCACAATTTTGAGCTGATTCCATTTGGAGCAGGGAGAAGGATTTGTCCA 1302
Query 1291 GGAATATCATTTGCTGTGGTGC-TGAATGAGGTAGTCTTGGCTAACTTAGTGCATGGGTT 1349
| ||||||||| || ||||| | ||| |||||| || |||||||||||||||||||||||
Sbjct 1303 GCAATATCATTCGCAGTGGT-CTTGATTGAGGTGGTTTTGGCTAACTTAGTGCATGGGTT 1361
Query 1350 TGATTGGCAAT 1360
||||||| |||
Sbjct 1362 TGATTGGAAAT 1372
> Ahg485188 jgi|Araly1|485188|fgenesh2_kg.5__1180__AT3G48270.1
Length=1371
Score = 957 bits (518), Expect = 0.0
Identities = 953/1155 (83%), Gaps = 62/1155 (5%)
Strand=Plus/Plus
Query 335 TGGCCTCAGCTCCTTATGGAGAGTATTGGCGACAAATGAAGAGTGT-TAGTGTTCTCCAT 393
||||||||||||||||||||||||||||| | |||||||||||||| | | || ||||||
Sbjct 242 TGGCCTCAGCTCCTTATGGAGAGTATTGGAGGCAAATGAAGAGTGTAT-GCGTCCTCCAT 300
Query 394 CTCCTCAGCAACAAAATGGTACGGTCCTTTCAAGACGTGAGACAAGAAGAGATCACTCTG 453
||| ||||||||||||||||||||||||||| ||| |||||| |||||||||||| | ||
Sbjct 301 CTCTTCAGCAACAAAATGGTACGGTCCTTTCGAGAAGTGAGAGAAGAAGAGATCAGTGTG 360
Query 454 ATGATGGAAACGATCCGTAAATCGAGTTCTAAACCGGTAAATCTTA-GCAAGATCTTG-T 511
|||||||||| ||||| ||||||| |||| ||||||||| ||| |||| |||||| |
Sbjct 361 ATGATGGAAAATATCCGGAAATCGAATTCTTTGCCGGTAAAT-TTAAGCAAAATCTTGGT 419
Query 512 CGAGTTTAACTAACGATGTTATATGTAGAGTAGCTTTGGGACGGAAATATGGTGTTGGAA 571
|||||||||||||||||| ||||||||||| ||||||||||||||||| |||| || ||
Sbjct 420 -GAGTTTAACTAACGATGTGATATGTAGAGTTGCTTTGGGACGGAAATACGGTGGTG-AA 477
Query 572 CAG-ATTTTAAAGAGTTAATAGACAGGCTCA-TGAGGCAACTTGGT-ACGTTTACTATCG 628
| ||||||| |||||||| || ||||| | | || | | |||| ||||||| | | |
Sbjct 478 GTGGATTTTAAGGAGTTAATGGAAAGGCTAAGTAAG-CTA-TTGGGGACGTTTAGTGTGG 535
Query 629 GGAGTTATGTACCGTGGCTTGCGTGGACTGATTGGGTCAGCGGTTTGGA-GGCTC-GACT 686
|||||||| ||||||||||||| ||| ||||||||||||||||||||| || || | ||
Sbjct 536 GGAGTTATATACCGTGGCTTGCCTGGGTTGATTGGGTCAGCGGTTTGGATGG-TCAG-CT 593
Query 687 GGAAAAGACCGCTAATGATTTTGATAAGCTATTGGAGAGAATTGTGCAGGATCATGA-AG 745
|||||||| || || ||| |||||||| | || |||||| ||||||| ||||||| |
Sbjct 594 AGAAAAGACGGCAAACGATCTTGATAAGTTCTTTGAGAGAGTTGTGCAAGATCATGTCA- 652
Query 746 ATGG-AGACGGCGACAAGACTGATTTTGTGGATGTATTGCTCGC-AGCTCAGAGAGACAA 803
|||| | || | || | ||||||||||||||||||||||||| | | ||||||||| ||
Sbjct 653 ATGGCA-ACAGAGATAGGACTGATTTTGTGGATGTATTGCTCTCCAT-TCAGAGAGAGAA 710
Query 804 GAGTTTCGGGTTCGATATTGACCG-GTTAAGCATAAAAGCAATCGTCTTGGATGCTTTTG 862
||| ||||||| || || |||| || | ||||||| || ||||||||||||| |||||
Sbjct 711 GAGCGTCGGGTTTGAAATCAACCGTGTCA-GCATAAAGGCTATCGTCTTGGATGTTTTTG 769
Query 863 TGGGTGGTACAGACACATCCTCCACGCTTGTGGAATGGGAAATGACAGAGCTTCTACGAC 922
|||||||||| |||||||| | || ||| ||||||||| |||||||||||||||||| |
Sbjct 770 TGGGTGGTACGGACACATCATATACACTTATGGAATGGGCAATGACAGAGCTTCTACGTC 829
Query 923 ACCCAACGTGTCTaaaaaaaCTTCAAGAGGAAGTCCGTACGATTTGTAAGGGAAA-ATCA 981
| |||| |||||| || | ||| ||||| |||||||||||||| ||||||| | | | ||
Sbjct 830 ATCCAAAGTGTCTGAACATACTCCAAGAAGAAGTCCGTACGATATGTAAGG-ACAGACCA 888
Query 982 AGTGTGTCTGAAGATGACATTCAAGGA-ATGGAA-TACTTAAAAGCTGTGGTCAAAGAGG 1039
||||| || ||||||||||| ||| || ||| || ||||||||||||||| |||| |||
Sbjct 889 AGTGTATCAGAAGATGACAT-CAAAGACATG-AACTACTTAAAAGCTGTGATCAAGGAGA 946
Query 1040 CACTCAGGCTACATCCACCAGTTCCATTGATGGTTCCTCATC-AATCAACACAAGATGTT 1098
||||||||||||| || || |||||||||||| |||||| | ||||||| ||||||||
Sbjct 947 CACTCAGGCTACACCCTCCCCTTCCATTGATGGCTCCTCA-CGAATCAACCCAAGATGTC 1005
Query 1099 AGGTTAAGAGATAACCATATACCTGCCGGTACGCAGGT-TAT-AGTCAAT-CTTTGGGCC 1155
|| ||||||||| |||| |||||||| ||||| ||||| | | | ||||| ||| ||||
Sbjct 1006 AGATTAAGAGATTACCACATACCTGCTGGTACACAGGTGT-TGA-TCAATGCTT-GGGC- 1061
Query 1156 G-TCGGGAGAGAGGCTGCGACGTGGGGACCAGATGCGAATGAGTTTAGACCGGAGAGGCA 1214
| ||||||||||||||||||| |||||| |||| ||| | ||||||||||| ||||||||
Sbjct 1062 GATCGGGAGAGAGGCTGCGACATGGGGATCAGACGCGGAGGAGTTTAGACCAGAGAGGCA 1121
Query 1215 TTTAGAGTCGCCT-TCTGATTTCCGGGGTCAGGATTTTGAGCTGATTCCTTTTGGAGCAG 1273
|||| | ||| || | ||||| ||||||||||| ||||||||||||||| ||||||||||
Sbjct 1122 TTTATATTCGTCTGT-TGATTACCGGGGTCAGGCTTTTGAGCTGATTCCGTTTGGAGCAG 1180
Query 1274 GGAGAAGGATGTGTCCAGGAATATCATTTGCTGTGGTGCTGAATGAGGTAGTCTT-GGCT 1332
| ||||| || || |||| ||||||||| || |||| | ||| |||||| | ||| ||||
Sbjct 1181 GAAGAAGAATTTGCCCAGCAATATCATTCGCAGTGGCGTTGATTGAGGTGG-CTTTGGCT 1239
Query 1333 AACTTAGTGCATGGGTTTGATTGG------C-A----A-TCTATAGACGATGAGACCGAT 1380
|||||||||||| ||| ||||||| | | | |||| ||| ||| |||| |||
Sbjct 1240 AACTTAGTGCATCGGTATGATTGGAGATTACCAGTTGAATCTACAGAAGATCAGACGGAT 1299
Query 1381 GTTGCTGAATCAA-TCGGTAGTGTGATTCGCCGCATGC-ACC-CTCTTTACGTCATTCCA 1437
|| |||||||||| | |||| || ||| | ||||||| ||| |||| ||| | || ||
Sbjct 1300 GTGGCTGAATCAACT-GGTATTGCGATCCACCGCATGTTACCACTCT--ACGCCGTTGCA 1356
Query 1438 TCATCTACTACTTGA 1452
|||||||||||||||
Sbjct 1357 TCATCTACTACTTGA 1371
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54316689370
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5