BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G48830.1
Length=2766
Score E
Sequences producing significant alignments: (Bits) Value
Ahg897736 jgi|Araly1|897736|Al_scaffold_0005_1702 2531 0.0
Ahg489230 jgi|Araly1|489230|fgenesh2_kg.6__2364__AT5G23690.1 1208 0.0
Ahg891335 jgi|Araly1|891335|Al_scaffold_0007_3321 479 5e-134
Ahg355810 jgi|Araly1|355810|fgenesh1_pg.C_scaffold_7002983 455 9e-127
Ahg937635 jgi|Araly1|937635|scaffold_501826.1 416 4e-115
Ahg937636 jgi|Araly1|937636|scaffold_501827.1 243 7e-63
Ahg355983 jgi|Araly1|355983|fgenesh1_pg.C_scaffold_7003156 230 6e-59
Ahg355852 jgi|Araly1|355852|fgenesh1_pg.C_scaffold_7003025 230 6e-59
Ahg906790 jgi|Araly1|906790|Al_scaffold_0003_3918 202 1e-50
Ahg891584 jgi|Araly1|891584|Al_scaffold_0007_3570 176 7e-43
Ahg891097 jgi|Araly1|891097|Al_scaffold_0007_3083 137 4e-31
> Ahg897736 jgi|Araly1|897736|Al_scaffold_0005_1702
Length=1833
Score = 2531 bits (1370), Expect = 0.0
Identities = 1527/1602 (95%), Gaps = 13/1602 (1%)
Strand=Plus/Plus
Query 121 ATGGCGGTTTTAAGTGTGGGTTTCTTCGCTTGCAGATCCCATTTTCCTGTTCTTCCCCTG 180
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGTTTTAAGTCTGGGTTTCTTCTCTTGCAGATCCCATTTTCCTGTTCTTCCCCTG 60
Query 181 TTTTACTGTTTCTCGAAGGTTCAGCTCAACACTGTTGCTGCTGCAATGGAGACTGTGGAT 240
|||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 61 TTTTACTGTTTCTCCAAGGTTCAGTTCAACACTGTTGCTGCTGCAATTGAGACTGTGGAT 120
Query 241 GACAAAGACAGTGATCATCATCATGACAAGGGTTCTAATAAGACGAGTAAAGCACCAGAG 300
||||| ||||||||||||| | ||| ||||||||| ||| |||||||||||||||||||
Sbjct 121 GACAAGGACAGTGATCATC-T--TGAGAAGGGTTCTGATAGGACGAGTAAAGCACCAGAG 177
Query 301 TGGAAGAAATTGAATTCAAAAGACCTTGGGATAACCACTTCTATGATTTCAAAGCCTACA 360
||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||
Sbjct 178 TGGAAGAAATTGAATTCAAAAGACCTTGGGATAACTAGTTCTATGATTTCAAAGCCCACA 237
Query 361 CGAATAGTGCTAAATGGCCTTAAGAGTAAAGGATATGATGTTTACCTTGTGGGAGGCTGT 420
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 238 CGACTAGTGCTAAATGGCCTTAAGAGTAAAGGATATGATGTTTATCTTGTGGGAGGCTGT 297
Query 421 GTACGCGATCTTATTTTGAAGCGGACGCCAAAAGACTTCGATATACTCACTTCTGCGGAA 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 GTACGGGATCTTATTTTGAAGCGGACGCCAAAAGACTTCGATATACTCACTTCTGCGGAA 357
Query 481 CTTAGAGAGGTTGTTCGGAGTTTCTCAAGATGTGAAATAATTGGaaaaaaaTTTCCTATA 540
||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct 358 CTTAGAGAGGTTGTTCGGACTTTCTCAAGATGTGAAATTGTTGGAAAAAGGTTTCCTATA 417
Query 541 TGTCATGTGCACATTGGGAATGATATGATAGAGGTTTCGAGTTTTAGCACCTCTGCTCAA 600
|||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 418 TGTCATGTGCACGTTGGGAATGAGATGATAGAGGTTTCGAGTTTTAGCACCTCTGCACAA 477
Query 601 AATTCTCTAAGAAACACAAGAACGGGTTCTGGAAAATCTAATGGTTCCTATGACGAGGAC 660
||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||||
Sbjct 478 AATTCTCCAAGAAACATGAGAACGGGTTCTGGAAAATCCAATGGCTCCTATGACGAGGAC 537
Query 661 AGTATCCGTTTCAATAACTGCTTGCAGCGTGATTTCACAATTAATGGGTTGATGTTTGAT 720
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 AACACCCGTTTCAATAACTGCTTGCAGCGTGATTTCACAATTAATGGGTTGATGTTTGAT 597
Query 721 CCATATGCCAAAGTTATATATGACTATCTTGGGGGAATAGAAGACATTAAAAAAGCTAAG 780
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 CCATATGCCGAAGTTGTATATGACTATCTTGGGGGAATAGAAGACATTAAAAAAGCTAAG 657
Query 781 GTACGGACAGTGTTTCATGCTGGCACATCATTTCAAGAGGACAGTGCCAGGATTCTTCGT 840
|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 658 ATACGGACAGTGTTTCATGCTGGCACATCTTTTCAAGAGGACTGTGCCAGGATTCTTCGT 717
Query 841 GGAACAAGAATTGCTGCGCGTTTAGGTTTTACAATTTCCAAGGAAACAGCTCATTTCTTA 900
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 718 GGGACAAGAATTGCTGCGCGTTTAGGTTTTACAATCTCCAAGGAAACAGCTCATTTCTTA 777
Query 901 AAGAACCTTTCCTTCCTAGTACAAAGACTCCACAGGGGAAGAATCTTGTTGGAAATGAAT 960
||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 778 AAGAACCTTTCCTTCTTAGTACAAAGGCTCCACAGGGGAAGAATCTTGATGGAAATGAAT 837
Query 961 TACATGTTAGCGTATGGATCAGCAGAAGCTTCTTTACGATTGTTGTGGAAATTTGGGATA 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 TACATGTTAGCGTATGGATCAGCAGAAGCTTCTTTACGATTGTTGTGGAAATTTGGGATA 897
Query 1021 CTAGAAATTCTTTTACCAATTCAGGCAGCATATCTCGTTCGCACTGGTTTCAAGAGACGC 1080
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 898 CTAGAAATTCTTTTACCAATTCAGGCAGCATATCTCGTTCACACTGGGTTCAAGAGACGC 957
Query 1081 GACAAAAGGAGTAACTTGCTTCTGTCTCTCTTCGGAAATTTGGATAAATTGTTGGCTCCT 1140
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 958 GACAAAAGGAGTAACTTGCTTCTGTCTCTCTTTGGAAATTTGGATAAATTGTTGGCTCCT 1017
Query 1141 GATAAACCTTGCCACAGCAGCTTATGGCTAACAATCTTGGCTCTTCACAAAGCACTTGCT 1200
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1018 GATAGACCTTGCCACAGCAGCTTGTGGCTAACAATCTTGGCTCTTCACAAAGCACTTGCT 1077
Query 1201 GATCAACCTCGATATCCTTCAGTGGTAGCCGCGTTTAGCCTTGCTGTCCACAATGGTGGA 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 GATCAACCTCGATATCCTTCAGTGGTAGCCGCGTTTAGCCTTGCTGTCCACAATGGTGGA 1137
Query 1261 GATGTTTTAGAAGCTGTAAAAAAT-ACCAGGAAAGTCACAAAGCCACATAATAGAAGCTT 1319
|||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1138 GATGTTCTAGAAGCTGTAAAAA-TCACCAGGAAAGTCACAAAGCCACATAATAGAAGCTT 1196
Query 1320 CTTTGAGCTACTGGAGCCAGAGGAAATGGACTCCCAAACCTTGTTGGATGAAGTCATGGA 1379
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct 1197 CTTTGAGCTACTGGAGCCAGAGGAACTGGACTCCCAAACCTTGTTGGATGAAGTTATGGA 1256
Query 1380 TTTTGATTCATCTATCAAAGAAGCCTTGGGACAGATGACTGATGGGAGGTTTATTTCCAA 1439
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1257 TTTTGATTCATCTATCAAAGAAGCCTTGGGACAGATGACTGATGGGAGATTTATTTCTAA 1316
Query 1440 GGCTATGGCAGCGTACCCTCAGGCCCCATATTCCGATATGGTTTTCATACCGTTGCAATT 1499
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1317 GGCTATGGCAGCGTACCCTCAGGCCCCATATTCTGATATGGTTTTCATACCGTTGCAATT 1376
Query 1500 GTACCTAGATGCAAGACGAATATTCGAGTGTGTGAAAGAAAATGGGCAGAAGGGATTTGT 1559
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 GTATCTAGATGCAAGACGTATATTCGAGTGTGTGAAAGAAAATGGGCAGAAGGGATTTGT 1436
Query 1560 GCCTAAGCAAGACAGTAAGCGAGAGCCAGAAGATGATTTGGAGACCAAACCGATTCTGAA 1619
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1437 GCCTAAGCAAGACAGTAAGCGAGAGCCAGAAGATGATTTGGAGACCAACCCTATTCTGAA 1496
Query 1620 GAAACATAAGGAAAATTCCGAGGAGGAGAAC-AA-GGA---GC--AGATCAAAGGAACGG 1672
||||||||||||||| ||||||||| | ||| || ||| || |||||||||||| ||
Sbjct 1497 GAAACATAAGGAAAAATCCGAGGAG-ACAACGAAAGGATTTGCTGAGATCAAAGGAAAGG 1555
Query 1673 TCGAGTTGTTGGAGACAAAATCTGATCAGGCTCCAGTGAAGG 1714
||||||||||| ||||||| ||||||||||||||| ||||||
Sbjct 1556 TCGAGTTGTTGAAGACAAAGTCTGATCAGGCTCCACTGAAGG 1597
Score = 200 bits (108), Expect = 4e-50
Identities = 161/186 (87%), Gaps = 6/186 (3%)
Strand=Plus/Plus
Query 1796 TTCCCTCAAGAAAAAAGACGCTCTATGTTTGCT-G-TCTCCCTCGCGACACTAAAATGCC 1853
|||||||||||||||||||||||| ||||| | | |||| | || | ||||| || |
Sbjct 1601 TTCCCTCAAGAAAAAAGACGCTCTCTGTTTCCCAGGTCTCT-T-GCCATACTAACATATC 1658
Query 1854 AGATATCATCGATTTCTTCAAAGATGTTGGACAAGTTGTTAGTGTTCAACTT-ACTACAA 1912
| |||||||| ||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 1659 AAATATCATCAATTTCTTCAAAGATGTTGGACAAGTTGTTAGTGTTCAACTTGATTT-AA 1717
Query 1913 AACGCAACGGTTTGCGTTTGTCCACTGGCTTCGTTGAGTTTGCTTCTGCTAACGAAGCAA 1972
||||| ||||| ||||||||||| |||||| ||||||||||||||||| ||||||||||
Sbjct 1718 AACGCGACGGTAAGCGTTTGTCCAGTGGCTTTGTTGAGTTTGCTTCTGCCAACGAAGCAA 1777
Query 1973 AGAAGG 1978
||||||
Sbjct 1778 AGAAGG 1783
> Ahg489230 jgi|Araly1|489230|fgenesh2_kg.6__2364__AT5G23690.1
Length=1745
Score = 1208 bits (654), Expect = 0.0
Identities = 1244/1516 (82%), Gaps = 91/1516 (6%)
Strand=Plus/Plus
Query 83 AAAAGCCCATGATGAAATGGTGAAACTTTTTGATTTCAATGGCGGTTTTAAGTGTGGGTT 142
|||| |||||||||||||| |||| ||||| |||||||||||| ||| |||||||||
Sbjct 52 AAAA-CCCATGATGAAATGTTGAACCTTTTCAATTTCAATGGCGATTTCAAGTGTGGG-- 108
Query 143 TCTTCGCTTGCAGATCCCATTTTCCTGTTC-T--TCCCCTGTTTTACTGTTTCTCGAAGG 199
| |||||||| |||||| |||| ||||||| | || || || | |||| || | |||||
Sbjct 109 T-TTCGCTTGTAGATCCTATTTCCCTGTTCGTACTCTCCAGTCTCACTGCTTATGGAAGG 167
Query 200 T----TC---A--GCTCAACACTGTTGCTGCTGCAATGGAGACTGTGGATGACAAAGACA 250
| || | | |||||||||||||||||||||| ||||| | |||||| |||
Sbjct 168 TGAACTCTTTACGGTTCAACACTGTTGCTGCTGCAATTGAGACAATAGATGACTCAGATT 227
Query 251 GTGATCATCATC-ATGACAAGGGTTCTAAT-AAGAC---G-AG-TAA--AG-CAC----- 295
|| || ||| | | ||| | || || | ||||| | | ||| | |||
Sbjct 228 GT-TTCTTCACCAAGGAC-A--GTGATAGTCAAGACAAGGTTGCTAATGGGACACGGGAT 283
Query 296 C-AGAGTGGAAGAAATTGAATTCAAAAGACCTTGGGATAACCA-CTTCTATGATTTC-AA 352
| ||||||||| | ||||||||||||||||||| |||| || | || |||||| | ||
Sbjct 284 CGTGAGTGGAAGCGACTGAATTCAAAAGACCTTGGAATAAGCAGC-TCAATGATTGCAAA 342
Query 353 AGCCTAC-ACGAATAGTGCTAAATGGCCTTAAGAGTAAAGGATATGATGTTTACCTTGTG 411
| || || | ||| |||||| ||||||||||| || |||||| |||||||||||||||||
Sbjct 343 ATCC-ACGA-GAAAAGTGCTTAATGGCCTTAAAAGCAAAGGACATGATGTTTACCTTGTG 400
Query 412 GGAGGCTGTGTACGCGATCTTATTTTGAAGCGGACGCCAAAAGACTTCGATATACTCACT 471
|||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||||
Sbjct 401 GGAGGCTGTGTACGGGATCTTATTCTGAAGCGGACACCGAAAGACTTCGATATACTCACC 460
Query 472 TCTGCGGAACTTAGAGAGGTTGTTCGGAGTTTCTCAAGATGTGAAATAATTGGaaaaaaa 531
||||| |||||||||||||||||||| | |||| ||||||||||||| |||||| ||
Sbjct 461 TCTGCAGAACTTAGAGAGGTTGTTCGAACTTTCCCAAGATGTGAAATTGTTGGAAGAAGG 520
Query 532 TTTCCTATATGTCATGTGCACATTGG-GAATGATAT-GATAGAGGTTTCGAGTTTTAGCA 589
|||||||||||||| || |||||||| || |||| | | ||||||| || |||||||| |
Sbjct 521 TTTCCTATATGTCACGTACACATTGGAGA-TGATTTAG-TAGAGGTCTCAAGTTTTAGTA 578
Query 590 CCTCTGCTCAAAATTCTCTAAGAAACACAAGAACGGGTTCTGGAA-AATCTAATGGTTCC 648
||||||| || |||| || ||||| || ||||| | || || |||| | ||| ||
Sbjct 579 CCTCTGCACAGAATTTTCCGAGAAATACGAGAACTGAATCCA-AAGAATCGAGTGGCTCA 637
Query 649 TATG---ACGAGGACAGTATCCGTTTCAATAACTGCTTGCAGCGTGATTTCACAATTAAT 705
||| | |||||| |||||||||| |||||||| |||||||||||||||||||||||
Sbjct 638 GATGGTGATGAGGACTGTATCCGTTTGAATAACTGTTTGCAGCGTGATTTCACAATTAAC 697
Query 706 GGGTTGATGTTTGATCCATATGCCAAAGTTATATATGACTATCTTGGG-GGAATAGAAGA 764
|||||||||||||||||||||| ||||| ||||||||||||| ||| ||||| |||||
Sbjct 698 GGGTTGATGTTTGATCCATATGGTAAAGTCGTATATGACTATCT-GGGAGGAATGGAAGA 756
Query 765 CATTAAAAAAGCTAAGGTACGGACAGTGTTTCATGCTGGCACATCATTTCAAGAGGACAG 824
|||| ||||||||| || || |||||| |||| ||||||||||| |||||| ||||| |
Sbjct 757 TATTAGAAAAGCTAAAGTTCGAACAGTGATTCACGCTGGCACATCTTTTCAACAGGACTG 816
Query 825 TGC-CAGGATTCTTCGTGGAACAAGAATTGCTGCGCGTTTAGGTTTTACAATTTCCAAGG 883
||| | |||||||||||| || | |||||||||||||||||||||| | ||| |||||||
Sbjct 817 TGCTC-GGATTCTTCGTGCAATACGAATTGCTGCGCGTTTAGGTTTCAGAATGTCCAAGG 875
Query 884 AAACAGCTCATTTC-TTAAAGAACCTTTCCTTCCTAGTACAAAGACTCCACAGGGGAAGA 942
||||||||||||| |||| ||||||||| || |||||||||||||| ||| ||||||
Sbjct 876 AAACAGCTCATTTTATTAA-GAACCTTTCTTTACTAGTACAAAGACTTGACAAGGGAAGG 934
Query 943 ATCTTGTTGGAAATGAATTACATGTTAGCGTATGGATCAGCAGAAGCTTCTTT-ACGATT 1001
|||||| ||||||||||||| |||||||| ||||||||||||||||||||||| | || |
Sbjct 935 ATCTTGATGGAAATGAATTATATGTTAGCTTATGGATCAGCAGAAGCTTCTTTGA-GACT 993
Query 1002 G-TTGTGGAAATTTGGGATACTAGAAATTCTTTTACCAATTCAGGCAGCATATCTCGTTC 1060
| || |||||||||||| |||||||||||||| |||||||||||||||||||||| | |
Sbjct 994 GCTT-TGGAAATTTGGGTTACTAGAAATTCTTCTACCAATTCAGGCAGCATATCTTGCAC 1052
Query 1061 GCACTGGTTTCAAGAGACGCGACAAAAGGAGTAACTTGCTTCTGTCTCTCTTCGGAAATT 1120
||| |||||||| |||||| |||||||||| |||| ||||||||||||| |||| ||||
Sbjct 1053 GCAGTGGTTTCAGGAGACGTGACAAAAGGACTAACATGCTTCTGTCTCTTTTCGCTAATT 1112
Query 1121 TGGATAAATTGTTGGCTCCTGATAAACCTTGCCACAGCAGCTTATGGCTAACAATCTTGG 1180
||||||||||||| || ||||||| |||||| ||||||||||||||| || |||||||||
Sbjct 1113 TGGATAAATTGTTAGCACCTGATAGACCTTGTCACAGCAGCTTATGGATAGCAATCTTGG 1172
Query 1181 C-TCTTCACAAAGCACTTGCTGATCAACCTCGATA-TCCT-TCAGTGGTAGCCGCGTTTA 1237
| | |||||||||| |||||||||||||||||| | |||| | |||||| || |||||||
Sbjct 1173 CAT-TTCACAAAGCGCTTGCTGATCAACCTCGA-AGTCCTGT-AGTGGTTGCTGCGTTTA 1229
Query 1238 GCCTTGCTGTCCACAA-TGGTGGAGATGTTTTAGAAGCTGTAAAAAAT-ACCAGGAA-AG 1294
|||||||||| ||||| || ||||||| || |||||||||| |||| | || | ||| |
Sbjct 1230 GCCTTGCTGTTCACAACTG-TGGAGATATTCTAGAAGCTGTGAAAA-TCACAAAGAAGA- 1286
Query 1295 TCACAAAGCCACATAATAGAAGCTTCTTTGAGCTACTGGAGCCAGAGGA-AATG--GACT 1351
|||| | |||||| ||| ||||||||| |||||| | ||||| ||||| ||| ||||
Sbjct 1287 TCACTAGGCCACACGATAAAAGCTTCTTCGAGCTAGTAGAGCCCGAGGAGAATCTAGACT 1346
Query 1352 CCCAAACC-TTGTTGGATGAAGTCATGGATTTTGATTCATCTATCAAAGAAGCCTTGGGA 1410
||||||| || ||||| || ||||||||| ||||| ||||||||||||| ||||| |
Sbjct 1347 TCCAAACCCTT-TTGGACGAGGTCATGGATCTTGATGCATCTATCAAAGATGCCTTAA-A 1404
Query 1411 C-AGATGACTGATGGG-AGGTT-TATTTCCAAGGCTATGGCAGCGTACCCTCAGGCCCCA 1467
| |||||||||||||| | || ||| || || |||||| |||| |||||||| || ||
Sbjct 1405 CCAGATGACTGATGGGTA--TTATATATCGAAAGCTATGTCAGCTTACCCTCAAGCACCG 1462
Query 1468 TATTCCGATATGGT-TTTCATACCGTTGCAATTGTACCT-AGATGCAAG-ACGAATATTC 1524
||||||||| |||| ||| |||||| ||||||||||||| ||| ||| | | || |||||
Sbjct 1463 TATTCCGATTTGGTATTT-ATACCGCTGCAATTGTACCTTAGA-GCAGGCAGGA-TATTC 1519
Query 1525 GAGTGTGTGAAAGAAA 1540
|| ||||||||| |||
Sbjct 1520 GATTGTGTGAAA-AAA 1534
> Ahg891335 jgi|Araly1|891335|Al_scaffold_0007_3321
Length=1683
Score = 479 bits (259), Expect = 5e-134
Identities = 432/514 (84%), Gaps = 17/514 (3%)
Strand=Plus/Plus
Query 2219 ATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGAGTA 2278
|||||||||| | |||||||||||||||||||||||||||||||||| || | | | |
Sbjct 533 ATTTCTTCAAAAACGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAACCATGTGGGCA 592
Query 2279 AGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGCTGG 2338
||||||||||||||||||||||||||||||||||| || | ||||||| ||||| ||||
Sbjct 593 AGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTGCTAACATAGCAAAGATGGCTCTGG 652
Query 2339 AAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTGGTGTGGCTAAGACAG 2398
|| ||| | ||||||||||||||| ||||||| |||||||||| |||||||||| |||
Sbjct 653 AAGAGATGCATGGTGAATATTTGCTTGATCATATGATTTTTCTTCATGTGGCTAAGGCAG 712
Query 2399 CTCCGTACCCTCCACGAATCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAAGACTATC 2458
|||| |||||||||||| |||||||||||||||||||| |||||| ||||| ||||| |
Sbjct 713 CTCCATACCCTCCACGACCCAAGTACAACCTTGCAGAGATGCTTTGTTACGAGGACTACC 772
Query 2459 TTCTACGAG-ATAGCCTTCTGATAGAAGAAGATGA-GA-----CAGTGGAAGGACTTGAT 2511
||| ||| | | |||||||||||||||||||| || || |||||||||||| ||||
Sbjct 773 TTCGACGTGGA-AGCCTTCTGATAGAAGAAGAAGAAGATGTGTCAGTGGAAGGACCTGAT 831
Query 2512 GAAACTCCTA-G--TTGTGTTGAGGCAGTTGCCTTAAGAGAAAAGGTGCTCATT-ATTGC 2567
|||| ||||| | || |||||||||||||||| ||||| ||||| ||| ||| |||||
Sbjct 832 GAAAGTCCTAAGCCTTTTGTTGAGGCAGTTGCCATAAGAAAAAAGACGCT-ATTTATTGC 890
Query 2568 GCA-TGTCCCTCGCCGAACAAAAATATCACATATCATCGATTTCTTCAAAGATGCTGGAC 2626
|| | || || | ||| ||| |||||| || ||| ||||||||||||||| ||||
Sbjct 891 -CAATCTCTGTCACAAAACTAAACCATCACACATTATCAATTTCTTCAAAGATGTTGGAG 949
Query 2627 AAGTTGTTAATGTCCGACTTATTGTAGACCAAAAGGGCAAGCCTTTTGGCCG-TGGCTTT 2685
|||||||| || | ||||||||||||||||| |||||||||| || ||| | |||||||
Sbjct 950 AAGTTGTTCATATTCGACTTATTGTAGACCATAAGGGCAAGC-TTGTGGGCTATGGCTTT 1008
Query 2686 GTTGAGTTTACTTCTGCTGACGAAGCAAAGAAGG 2719
|||| |||| |||||||| |||||||||||||||
Sbjct 1009 GTTGTGTTTGCTTCTGCTAACGAAGCAAAGAAGG 1042
Score = 185 bits (100), Expect = 1e-45
Identities = 200/247 (81%), Gaps = 12/247 (5%)
Strand=Plus/Plus
Query 2220 TTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAG-CCCCGA-GAGT 2277
||||||||| |||||||||||||||||| |||||||||||||||| || || | | ||||
Sbjct 1314 TTTCTTCAAAGATGTTGGAGAAGTTGTTTGTGTTCGACTTATTGT-AGACCAC-ATGAGT 1371
Query 2278 AAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGCTG 2337
||| | |||||| |||||||||||||||||||||| ||| | |||||| | ||||||
Sbjct 1372 GAGCGTTTGGGCTGTGGCTTTGTTGAGTTTGCTTCTTCTTACGAAGCAAAGAAGGCGCTA 1431
Query 2338 GAAAAGAAGAATGGTGAA-TATTTGCA-CGATC-ATAAGATTTTTCTTGGTGTGGCTAAG 2394
|||| ||||| | || || | || | | || || |||||||||| |||||| ||
Sbjct 1432 GAAACGAAGATTAGTAAAGCA-TT-AATGGGTCAAT-TTATTTTTCTTGACGTGGCTGAG 1488
Query 2395 ACAGCTCCGTACCCTC-CACGAATCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAAGA 2453
| | ||| | ||||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1489 ATACCTCTATGCCCTCTC-CGACCCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAAGA 1547
Query 2454 CTATCTT 2460
||| |||
Sbjct 1548 CTACCTT 1554
Score = 108 bits (58), Expect = 3e-22
Identities = 163/212 (77%), Gaps = 14/212 (7%)
Strand=Plus/Plus
Query 1803 AAGAAAAAAGACGCTCTATGT-TTG-CTGTCTCCCTCGCGACACTAAA--ATGCCAGATA 1858
||||||||||||| |||| | ||| | |||| || | | |||||| || || | |
Sbjct 867 AAGAAAAAAGACG--CTATTTATTGCCAATCTCTGTCACAAAACTAAACCAT--CACACA 922
Query 1859 TCATCGATTTCTTCAAAGATGTTGGACAAGTTGTT-AGTGTTCAACTTACTACAAAACGC 1917
| ||| |||||||||||||||||||| |||||||| | | ||| ||||| | | | |
Sbjct 923 TTATCAATTTCTTCAAAGATGTTGGAGAAGTTGTTCA-TATTCGACTTATTGTAGACCAT 981
Query 1918 AACGGTTTGCGTT-T-GTCCACTGGCTTCGTTGAGTTTGCTTCTGCTAACGAAGCAAAGA 1975
|| || || || | | | | |||||| |||| ||||||||||||||||||||||||||
Sbjct 982 AAGGGCAAGC-TTGTGGGCTA-TGGCTTTGTTGTGTTTGCTTCTGCTAACGAAGCAAAGA 1039
Query 1976 AGGCGCTGGATATGAAGAATGGTGAATATTTG 2007
|||| || || | |||||| ||||||||||||
Sbjct 1040 AGGCACTAGAAAAGAAGAACGGTGAATATTTG 1071
Score = 58.4 bits (31), Expect = 3e-07
Identities = 36/38 (95%), Gaps = 2/38 (5%)
Strand=Plus/Plus
Query 1605 CAAACCGATTCTGAAGAAACATAAGGAAAA-TTCCGAG 1641
|||||||||||||||||||||||||||||| ||| |||
Sbjct 72 CAAACCGATTCTGAAGAAACATAAGGAAAAATTC-GAG 108
> Ahg355810 jgi|Araly1|355810|fgenesh1_pg.C_scaffold_7002983
Length=1788
Score = 455 bits (246), Expect = 9e-127
Identities = 422/505 (84%), Gaps = 20/505 (4%)
Strand=Plus/Plus
Query 2216 TCGATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGA 2275
|||||||||||||| |||||||||||||||||||||||||||||||||||| || |||
Sbjct 689 TCGATTTCTTCAATTATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAACCATGAGG 748
Query 2276 GTAAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGC 2335
|||||||||||||||||||||||||||||||||||||| || |||| |||| | ||| |
Sbjct 749 GTAAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTGCTAACTTAACAAAAAAGGCAC 808
Query 2336 TGGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTGGTGTGGCTAAGA 2395
||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 809 TGGAAAACAAGAATGGTGAATATTTGCACAATCATAAGATTTTTCTTGATGTGGCTAAGA 868
Query 2396 CAGCTCCGTACCCTCCACGAATCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAAGACT 2455
|||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 869 AAGCTCCATACCCTCCACGACCCAAGTACAACCTTGCAGAGAAGCTTTGTTACGAAGACT 928
Query 2456 ATCTTCTACGAGATAGCCTTCTGATAGAAGAAGATGAGACAGTGGAAGGACTTGATGAAA 2515
| |||| |||||| ||||||| |||||||||||| | ||| | || | |||
Sbjct 929 ACCTTCGACGAGAAAGCCTTCCGATAGAAGAAGA-G---CAG---AC--ACCTCCTGA-- 977
Query 2516 CTCCTAGTTGTGTTGAGGCAGTTGCCTTAAG-AGAAAAGGTGCTCATTATTGCGCATGTC 2574
| | |||| | |||||||||| | |||| | ||| | |||| || |||| ||| ||
Sbjct 978 -T--T--TTGT-T-GAGGCAGTTGGCGTAAGTACAAA-GACGCTCTTTGTTGCCCATCTC 1029
Query 2575 CCTCGCCGAACAAAAATATCACATATCATCGATTTCTTCAAAGATGCTGGACAAGTTGTT 2634
|||| ||| ||||||| |||||||| |||||||||| |||| |||| ||||||||
Sbjct 1030 TCTCGTAAAACTGAAATATCGCATATCATAAATTTCTTCAATGATGTTGGAGAAGTTGTT 1089
Query 2635 AATGTCCGACTTATTGTAGACCAAAAGGGCAAGCCTTTTGGCCGTGGCTTTGTTGAGTTT 2694
|||| ||||||||| || |||| || ||||||| ||| ||| |||||||||| |||||
Sbjct 1090 CATGTTCGACTTATTCTAAACCACAATGGCAAGCATTTGGGCTGTGGCTTTGTAGAGTTC 1149
Query 2695 ACTTCTGCTGACGAAGCAAAGAAGG 2719
||||||| |||||||||||||||
Sbjct 1150 GGTTCTGCTAACGAAGCAAAGAAGG 1174
Score = 357 bits (193), Expect = 2e-97
Identities = 410/512 (80%), Gaps = 25/512 (5%)
Strand=Plus/Plus
Query 2219 ATTTCTTCAATGATGTTGGAGAAGTTGTT-AGTGTTCGACTTATTGTAAGCCCCGA-GAG 2276
||||||||||||||||||||||||||||| | ||||||||||||| ||| || | | | |
Sbjct 1061 ATTTCTTCAATGATGTTGGAGAAGTTGTTCA-TGTTCGACTTATTCTAAACCACAATG-G 1118
Query 2277 TAAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGCT 2336
|||||| |||||| ||||||||| ||||| | |||| || | |||||| | |||| |
Sbjct 1119 CAAGCATTTGGGCTGTGGCTTTGTAGAGTTCGGTTCTGCTAACGAAGCAAAGAAGGCG-T 1177
Query 2337 -GGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTGGTGTGGCTAAGA 2395
|||||||| || |||||| ||||| ||||| ||||||||||||| ||||||||||
Sbjct 1178 ATGAAAAGAAAAACGGTGAAAATTTGAACGATTGCAAGATTTTTCTTGAAGTGGCTAAGA 1237
Query 2396 CAGCTCC-GTACCCTCCACGAATCAAGTACAACCTTGCAGA-GA-A-GCTTTGGTACGAA 2451
||||||| | ||||||||| |||||| ||| ||| | | | |||||||||||
Sbjct 1238 CAGCTCCAG-ACCCTCCAC---CCAAGTA-TTGCTT--AGATCACATGGTTTGGTACGAA 1290
Query 2452 GACTATCTTCTACGAGATA-GCCTTCTGATAGAAGAAGATGAGACAGTGGAAGGACTTGA 2510
||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 1291 GACTACCTTCGACGAGA-ACGCCTTCTGATAGAAGAAGATGAGACAGTGGAAGGACTTGA 1349
Query 2511 TGAAACTCCTAGTTGT-GTTGAGGCAGTTGCCTTAAGAGAAAAGGTGCTCATTATTGCGC 2569
|||| |||| ||| | ||||||| || |||| || | |||| |||| ||||||| |
Sbjct 1350 TGAACCTCCC-GTTTTTGTTGAGGAAGCTGCCGTACTAAAAAATACGCTCTTTATTGC-C 1407
Query 2570 A-TGTCCCTCGCCGAACAAAAATATCACATATCATCGATTTCTTCAAAGATGCTGGACAA 2628
| | || ||| | ||| |||||||||||||||||| | ||||||||||||| |||| ||
Sbjct 1408 AATCTCTCTCACAAAACTAAAATATCACATATCATCAAATTCTTCAAAGATGTTGGAGAA 1467
Query 2629 GTTGTTAAT-GTCCGACTTATTGTAGACCAAAAGGGCAAGCCTTTTGGCCGTGGCTTTGT 2687
||| || || |||||||||||| |||| | ||| ||| | | || ||||||||||
Sbjct 1468 GTT-TTCCGCGTTCGACTTATTGTAAACCACAGGGGTGAGCATGTGGGTTGTGGCTTTGT 1526
Query 2688 TGAGTTTACTTCTGCTGACGAAGCAAAGAAGG 2719
|||||| | |||||| | |||||||||||||
Sbjct 1527 CGAGTTTGCCTCTGCTAATGAAGCAAAGAAGG 1558
Score = 217 bits (117), Expect = 4e-55
Identities = 198/236 (84%), Gaps = 10/236 (4%)
Strand=Plus/Plus
Query 2221 TTCTTCAATGATGTTGGAGAAGTTGTT-AGTGTTCGACTTATTGTAAGCC-CCGAGAGTA 2278
|||||||| ||||||||||||||| || | |||||||||||||||| || | | | ||
Sbjct 1447 TTCTTCAAAGATGTTGGAGAAGTT-TTCCGCGTTCGACTTATTGTAAACCACAG-GGGTG 1504
Query 2279 AGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCT-TAGCAAACATGGCGCTG 2337
|||||||||| | ||||||||| |||||||| ||| | | | |||||| | |||||||
Sbjct 1505 AGCATGTGGGTTGTGGCTTTGTCGAGTTTGCCTCTGC-TAATGAAGCAAAGAAGGCGCTG 1563
Query 2338 GAAAAGAAGAATGGTGAATATTTGCACGA-TCATAAGATTTTTCTTGGTGTGGCTAAGAC 2396
||||||||||||||||| |||||| | | ||||||||||||||||| |||||| |||
Sbjct 1564 CAAAAGAAGAATGGTGAAAATTTGCGC-AGTCATAAGATTTTTCTTGACGTGGCTGAGAG 1622
Query 2397 AGCTCCGTACCCTC-CACGAATCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAA 2451
|||||| ||||||| | ||| |||||||||||||||||||||||||||| |||||
Sbjct 1623 AGCTCCATACCCTCTC-CGACCCAAGTACAACCTTGCAGAGAAGCTTTGGCACGAA 1677
> Ahg937635 jgi|Araly1|937635|scaffold_501826.1
Length=1229
Score = 416 bits (225), Expect = 4e-115
Identities = 236/241 (98%), Gaps = 2/241 (1%)
Strand=Plus/Plus
Query 2176 TTTTCCATGACTGATATTTTATCCTTCCACTTTTACAGACTCGATTTCTTCAATGATGTT 2235
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 15 TTTTCCATGACTGATATTTTATCCTTCCACTTTTACAGATTCGATTTCTTCAATGATGTT 74
Query 2236 GGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGAGTAAGCATGTGGGCTATGGC 2295
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 75 GGAGAAGTTGTTAGTGTTCGACTTATTGTAAACCCCGAGGGTAAGCATGTGGGCTATGGC 134
Query 2296 TTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGCTGGAAAAGAAGAATGGTGAA 2355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 135 TTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGCTGGAAAAGAAGAATGGTGAA 194
Query 2356 TATTTGCACGATCATAAGATTTTTCTTGGTGTGGCTAAGACAGCTCC-GTACCCTCCACG 2414
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 195 TATTTGCACGATCATAAGATTTTTCTTGGTGTGGCTAAGACAGCTCCAG-ACCCTCCACG 253
Query 2415 A 2415
|
Sbjct 254 A 254
Score = 355 bits (192), Expect = 9e-97
Identities = 224/240 (93%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 2480 TAGAAGAAGATGAGACAGTGGAAGGACTTGATGAAACTCCTAGTTGTGTTGAGGCAGTTG 2539
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 373 TAGAAGAAGATGAGACAGTGGAAGGACTTGATGAAACTCCCAGTTGTGTTGAGGCAGTTG 432
Query 2540 CCTTAAGAGAAAAGGTGCTCATTATTGCGCATGTCCCTCGCCGAACAAAAATATCACATA 2599
|||||||||||||||||||| || |||||||| | |||||| ||| |||||||||||||
Sbjct 433 CCTTAAGAGAAAAGGTGCTCTTTGTTGCGCATCTTTCTCGCCAAACTAAAATATCACATA 492
Query 2600 TCATCGATTTCTTCAAAGATGCTGGACAAGTTGTTAATGTCCGACTTATTGTAGACCAAA 2659
||||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||
Sbjct 493 TCATCAATTTCTTCAAAGATGTTGGCCAAGTTGTTCATGTCCGACTTATTGTAGACCAAA 552
Query 2660 AGGGCAAGCCTTTTGGCCGTGGCTTTGTTGAGTTTACTTCTGCTGACGAAGCAAAGAAGG 2719
||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 553 AGGGCAAGCATGCTGGCCATGGCTTTGTTGAGTTTACTTCTGCTGACGAAGCAAAGAAGG 612
Score = 156 bits (84), Expect = 1e-36
Identities = 158/194 (81%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 2219 ATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGA-GAGT 2277
|||||||||| ||||||||||||||| || ||||| |||||||||||| || | | | ||
Sbjct 865 ATTTCTTCAAAGATGTTGGAGAAGTTTTTCGTGTTAGACTTATTGTAAACCAC-ATGGGT 923
Query 2278 AAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGCTG 2337
|||||||||||| |||||||||||| ||| ||||| || | |||||| | |||||||
Sbjct 924 GAGCATGTGGGCTGTGGCTTTGTTGAATTTTCTTCTGCTAACGAAGCAAAGAAGGCGCTG 983
Query 2338 GAAAAGAAGAATGGTGAATATTTGCACGATC-ATAAGATTTTTCTTGGTGTGGCTAAGAC 2396
||||||||||||||||| | |||| | || | | |||||||||| | |||| |||
Sbjct 984 CAAAAGAAGAATGGTGAAAAATTGCGCTTTCGGT-ATATTTTTCTTGACGAGGCTGAGAT 1042
Query 2397 AGCTCCGTACCCTC 2410
|||||| |||||||
Sbjct 1043 AGCTCCATACCCTC 1056
Score = 130 bits (70), Expect = 6e-29
Identities = 239/318 (75%), Gaps = 21/318 (7%)
Strand=Plus/Plus
Query 1803 AAGAAAAAAGACGCTCTATGTTTG-CTGTCTCCCTCGCGACACTAAAATGCCAGATATCA 1861
|||||| |||||||| | | ||| | |||| || | | |||||||| ||||||||
Sbjct 803 AAGAAAGAAGACGCT-TTTCATTGCCAATCTCTCTTTCAAAACTAAAATATCAGATATCG 861
Query 1862 TCGATTTCTTCAAAGATGTTGGACAAGTTGTTAGTGTTCA-ACTTACTACAAAACGCAAC 1920
|| |||||||||||||||||||| ||||| || ||||| | ||||| | ||| | ||
Sbjct 862 TCAATTTCTTCAAAGATGTTGGAGAAGTTTTTCGTGTT-AGACTTATTGTAAACCACATG 920
Query 1921 GGTTTGCGTTTGTCCACTGGCTTCGTTGAGTTTGCTTCTGCTAACGAAGCAAAGAAGGCG 1980
||| || | || | |||||| ||||| ||| ||||||||||||||||||||||||||
Sbjct 921 GGTGAGCATGTGGGCTGTGGCTTTGTTGAATTTTCTTCTGCTAACGAAGCAAAGAAGGCG 980
Query 1981 CTGGATATGAAGAATGGTGAATATTTGTG-T---GGTAATAAGCTTATTCTTGGC-ATGG 2035
||| | | ||||||||||||| | ||| | | |||| || || |||||| | | ||
Sbjct 981 CTGCAAAAGAAGAATGGTGAAAAATTGCGCTTTCGGTA-TAT--TT-TTCTTGACGA-GG 1035
Query 2036 CT-AGCT-GCGAAAATAT--TGCACA-ACCCAAGTACGAAGACTACATTCAACAAGAAAG 2090
|| || | || | || | | | ||||||||||||||| ||| ||| || ||| ||
Sbjct 1036 CTGAGATAGCTCCA-TACCCT-CTCCGACCCAAGTACGAAGAGTACCTTCTACGAGATAG 1093
Query 2091 CCTTCCGATTGAAGAAGA 2108
||||| ||| ||||||||
Sbjct 1094 CCTTCTGATAGAAGAAGA 1111
Score = 63.9 bits (34), Expect = 6e-09
Identities = 41/44 (93%), Gaps = 2/44 (5%)
Strand=Plus/Plus
Query 1714 GAGACAGTGGAAGGACTTGATGAAACTCCC-GATTCTGTTGAGG 1756
|||||||||||||||||||||||||||||| | || ||||||||
Sbjct 384 GAGACAGTGGAAGGACTTGATGAAACTCCCAG-TTGTGTTGAGG 426
> Ahg937636 jgi|Araly1|937636|scaffold_501827.1
Length=377
Score = 243 bits (131), Expect = 7e-63
Identities = 165/182 (91%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 1796 TTCCCTCAAGAAAAAAGACGCTCTATGTTTGCTGTCTCCCTCGCGACACTAAAATGCCAG 1855
||||||||||| |||| |||||||||||| ||||||| ||| | | |||||||| |||
Sbjct 125 TTCCCTCAAGACAAAACACGCTCTATGTTACCTGTCTCTCTCCCCATACTAAAATATCAG 184
Query 1856 ATATCATCGATTTCTTCAAAGATGTTGGACAAGTTGTTAGTGTTCAACTTACTACAAAAC 1915
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 185 ATATCATCGATTTCTTCAAAGATGTTGGACAAGTTGTTAGTGTTCAACTTACTATAAAAC 244
Query 1916 GCAACGGTTTGCGTTTGTCCACTGGCTTCGTTGAGTTTGCTTCTGCTAACGAAGCAAAGA 1975
|| | ||| ||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 245 GCGAGGGTAAGCGTTTGTCCAGTGGCTTTGTTGAGTTTGCTTCTGCTAACGAAGCAAAGA 304
Query 1976 AG 1977
||
Sbjct 305 AG 306
> Ahg355983 jgi|Araly1|355983|fgenesh1_pg.C_scaffold_7003156
Length=1659
Score = 230 bits (124), Expect = 6e-59
Identities = 218/262 (83%), Gaps = 12/262 (5%)
Strand=Plus/Plus
Query 2220 TTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAG-CCCCGA-GAGT 2277
||||||||| |||||||||||||||||| |||||||||||||||| || || | | | ||
Sbjct 1311 TTTCTTCAAAGATGTTGGAGAAGTTGTTCGTGTTCGACTTATTGT-AGACCAC-ATGGGT 1368
Query 2278 AAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTG-CTTAGCAAACATGGCGCT 2336
|||| |||||||| ||||||| |||||||||||||| | || |||| | | ||||||
Sbjct 1369 AAGCCTGTGGGCTGTGGCTTTATTGAGTTTGCTTCTGC-TGAAGAAGCAGAGAAGGCGCT 1427
Query 2337 GGAAAAGAAGAATGGTGAATATTTGCACGATCA-TAAGATTTTTCTTGGTGTGGCTAAGA 2395
||||||||||||||||||| ||||| | | | |||||||| ||||| ||||| |||
Sbjct 1428 GGAAAAGAAGAATGGTGAACGTTTGCGC-TTTAGTAAGATTTGTCTTGACATGGCTGAGA 1486
Query 2396 CAGCTCCGTACCCTC-CACGAATCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAAGAC 2454
|||||| ||||||| | ||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1487 TAGCTCCATACCCTCTC-CGACTCAAGTACAACCTTGCAGAGAAGCTTTGGTATGAAGAC 1545
Query 2455 TATCTTCTACGAG-ATAGCCTT 2475
| |||| | ||| | ||||||
Sbjct 1546 AAACTTCGAGGAGGA-AGCCTT 1566
Score = 182 bits (98), Expect = 2e-44
Identities = 240/307 (78%), Gaps = 15/307 (5%)
Strand=Plus/Plus
Query 2216 TCGATTTCTTCAATGATGTTGGAGAAGTTGTT-AGTGTTCGACTTATTGTAAGCCCCGAG 2274
||||||||||||||||||||| | |||||||| | |||||| |||||||||| || | ||
Sbjct 203 TCGATTTCTTCAATGATGTTGCACAAGTTGTTCA-TGTTCGCCTTATTGTAAACCACAAG 261
Query 2275 AGTAAGCATGT-GGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGC 2333
| |||||| | |||||||||||||||||||||||||||| | | ||| || | |||
Sbjct 262 GGCAAGCAT-TCGGGCTATGGCTTTGTTGAGTTTGCTTCTGCGAACGAAGCTAAGAAGGC 320
Query 2334 GCTGGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTGGTGTGGCTAA 2393
|||||||||||| |||||||||||||||| |||| ||| |||||| | |||||||
Sbjct 321 TCTGGAAAAGAAGTCCGGTGAATATTTGCACGGTCATCGGATATTTCTTCATTTGGCTAA 380
Query 2394 G-ACA-GCT-CC-G--TACCCTCCACGAATCAAGTACAACCTTGCAG-AGAAGCTTTGGT 2446
| | | || | ||| || || |||||| | ||| | | ||| ||||||
Sbjct 381 TTATAAGAAACCTGCATACTTTCTACC---CAAGTATTGCATTG-ATCACAAGGTTTGGT 436
Query 2447 ACGAAGACTATCTTCTACGAGATAGCCTTCTGATAGAAGAAGATGAGACAGTGGAAGGAC 2506
| || ||||| ||| |||||| ||| ||||||||||||| |||||||||| ||||||||
Sbjct 437 ATGATGACTACCTTGGACGAGAAAGCTTTCTGATAGAAGATGATGAGACAGAGGAAGGAC 496
Query 2507 TTGATGA 2513
|||||||
Sbjct 497 TTGATGA 503
Score = 87.9 bits (47), Expect = 4e-16
Identities = 82/98 (84%), Gaps = 6/98 (6%)
Strand=Plus/Plus
Query 2219 ATTTCTTCAATGATGTTGGAGAAGTTGTT-AGTGTTCGACTTA-TTGTAAGC-CCCGAGA 2275
|||||||||| ||||| |||||||| ||| | ||||| ||||| || ||| | | ||
Sbjct 899 ATTTCTTCAAAGATGTCGGAGAAGTCGTTCA-TGTTCAACTTACTT-TAAACAACAAAG- 955
Query 2276 GTAAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCT 2313
| | ||||||||||||||||||||||||||||||||||
Sbjct 956 GCAGGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCT 993
> Ahg355852 jgi|Araly1|355852|fgenesh1_pg.C_scaffold_7003025
Length=1905
Score = 230 bits (124), Expect = 6e-59
Identities = 225/273 (82%), Gaps = 10/273 (4%)
Strand=Plus/Plus
Query 2219 ATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCC-CCGAGAGT 2277
|||||||||| |||||||||||||||||| |||||||||||||||||| || | | | ||
Sbjct 1541 ATTTCTTCAAAGATGTTGGAGAAGTTGTTGGTGTTCGACTTATTGTAAACCACAG-GGGT 1599
Query 2278 AAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCT-TAGCAAACATGGCGCT 2336
|||||||| ||| |||||||||||||||| ||||| | || | |||||| | ||||||
Sbjct 1600 GAGCATGTGTGCTGTGGCTTTGTTGAGTTTTCTTCTGC-TGATGAAGCAAAGAAGGCGCT 1658
Query 2337 GGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTGGTGTGGCTAAGAC 2396
| ||| ||||||||||||| |||| | | || | |||||||||| |||| ||||
Sbjct 1659 GCAAATGAAGAATGGTGAAAATTTCCTTGGTCGTTTTATTTTTCTTGACGTGGTTAAGTT 1718
Query 2397 AGCTCCGTACCC--TCCACGAATCAAGTACAACCTTGCAGAGAAGCTTTGGTACGAAGAC 2454
|||||| ||||| | | ||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1719 AGCTCCATACCCAAT-C-CGACCCAAGTACAACCTTGCAGAGAAGCTTTGGTTCGAAGAG 1776
Query 2455 TATCTTCTACGAGA-TAGCCTTCTGATAGAAGA 2486
|| |||| |||| | || |||||||||||||||
Sbjct 1777 TACCTTCGACGACAATA-CCTTCTGATAGAAGA 1808
Score = 209 bits (113), Expect = 7e-53
Identities = 145/161 (90%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 2218 GATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGAGT 2277
||||||| ||| ||||||||||||||||||||||||||||||||||||| || |||| ||
Sbjct 880 GATTTCTGCAAAGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAACCACGAGTGT 939
Query 2278 AAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGGCGCTG 2337
|||||||| ||||||||||||||||||||||||||| || | ||| || | || ||||
Sbjct 940 AAGCATGTTGGCTATGGCTTTGTTGAGTTTGCTTCTGCTAACGCAGCGAAGAAGGTGCTG 999
Query 2338 GAAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTT 2378
||||||||||||||||||||||| |||||||||||||||||
Sbjct 1000 GAAAAGAAGAATGGTGAATATTTACACGATCATAAGATTTT 1040
Score = 76.8 bits (41), Expect = 8e-13
Identities = 113/144 (78%), Gaps = 19/144 (13%)
Strand=Plus/Plus
Query 1575 TAAGCGAGAGCCAGAAGATGATTTGGAGACCAAACCGATTCTGAAGAAACATAAGGAAAA 1634
||||||| | || |||||||||||||| |||||||| ||||| ||||||||||||| |||
Sbjct 294 TAAGCGAAAACCGGAAGATGATTTGGAAACCAAACCCATTCTCAAGAAACATAAGG-AAA 352
Query 1635 T-TCC--G-A-G-G-AGGAG--AA-C-AAGGA---GCAGATCA--AAGGAAC-GGTCGAG 1677
| ||| | | | | ||||| || | ||||| || ||| | | | |||||||
Sbjct 353 TATCCGAGAAGGAGAAGGAGATAACCGAAGGATTTGCTGAT-AGTCTCCACCAGGTCGAG 411
Query 1678 TTGTTGGAGACAAAATCTGATCAG 1701
||||||||||||||||||||||||
Sbjct 412 TTGTTGGAGACAAAATCTGATCAG 435
> Ahg906790 jgi|Araly1|906790|Al_scaffold_0003_3918
Length=1443
Score = 202 bits (109), Expect = 1e-50
Identities = 147/165 (89%), Gaps = 3/165 (2%)
Strand=Plus/Plus
Query 2220 TTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGAGTAA 2279
||||||||| ||||||||||| ||||||||||||||||||||||||| || ||| ||||
Sbjct 501 TTTCTTCAAAGATGTTGGAGATGTTGTTAGTGTTCGACTTATTGTAAACCAGGAGGGTAA 560
Query 2280 GCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTGCTTAGCAAACATGG-CGCTGG 2338
||||||||||||||||||||||||||||||| || || | |||||| ||| ||||||
Sbjct 561 GCATGTGGGCTATGGCTTTGTTGAGTTTGCTACTGCTCACCAAGCAAAG-TGGGCGCTGG 619
Query 2339 AAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTG 2383
|||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct 620 AAAATAAGAATGGTGAATACTTGCACGATCATAAGATTTT-CTTG 663
Score = 132 bits (71), Expect = 2e-29
Identities = 170/215 (79%), Gaps = 17/215 (8%)
Strand=Plus/Plus
Query 1803 AAGAAAAAAGACGCTCTATGTTTGCTGTCTCCCTCGC--GAC-ACTAAAATGCCAGATAT 1859
|||||| ||||| |||| |||| | |||| ||| | || || ||||| || ||||
Sbjct 711 AAGAAATAAGACACTCTTTGTTACCAATCTCTCTCCCATAACAACAAAAATATCACATAT 770
Query 1860 CATCGATTTCTTCAAAGATGTTGGACAAGTTGTT-AGTGTTCAACTTACT--A--C-AAA 1913
|||| ||||||||||||||||||||||||||||| | ||||| ||||| | | | |||
Sbjct 771 CATCAATTTCTTCAAAGATGTTGGACAAGTTGTTCA-TGTTCGACTTATTGTAGACCAAA 829
Query 1914 -ACGCAACGGTTTGCGTTTGTCCACTGGCTTCGTTGAGTTTGCTTCTGCTAACGAAGCAA 1972
| ||| || | | || || |||||| |||||||||||||||||||||||||||
Sbjct 830 GATGCA--GGAT-G-GTGGGTTT--TGGCTTTGTTGAGTTTGCTTCTGCTAACGAAGCAG 883
Query 1973 AGAAGGCGCTGGATATGAAGAATGGTGAATATTTG 2007
||||||||||||| | |||||| ||||||||||||
Sbjct 884 AGAAGGCGCTGGAAAAGAAGAAGGGTGAATATTTG 918
> Ahg891584 jgi|Araly1|891584|Al_scaffold_0007_3570
Length=1284
Score = 176 bits (95), Expect = 7e-43
Identities = 144/167 (86%), Gaps = 5/167 (3%)
Strand=Plus/Plus
Query 2216 TCGATTTCTTCAATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGA 2275
||||||||| ||| ||||||||||||||||| |||| ||||||||||| || || |||
Sbjct 419 TCGATTTCTGCAAAGATGTTGGAGAAGTTGTCAGTGCTCGACTTATTGCAAACCATGAGG 478
Query 2276 GTAAGCATGTGGGCTATGGCTTTGTTGAGTTTGC-TTCTCCT-TGCTTAGCAAACATGGC 2333
| ||||||||||||| || ||||||||||||| | |||| || | | |||||| | |||
Sbjct 479 GCAAGCATGTGGGCTGTGCCTTTGTTGAGTTT-CTTTCTGCTAT-CGAAGCAAATAAGGC 536
Query 2334 GCTGGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGAT-TTTT 2379
||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 537 GCTGGAAAAGAAGAATGGTGAATATTTGCACAATCATAAGATCTTTT 583
Score = 76.8 bits (41), Expect = 8e-13
Identities = 55/61 (90%), Gaps = 3/61 (5%)
Strand=Plus/Plus
Query 1574 GTAAGCGAGAGCC--A-GAAGATGATTTGGAGACCAAACCGATTCTGAAGAAACATAAGG 1630
|||||||| | || | || ||||||||||||||||||||||||||||||||||||||||
Sbjct 35 GTAAGCGAAATCCGGACGATGATGATTTGGAGACCAAACCGATTCTGAAGAAACATAAGG 94
Query 1631 A 1631
|
Sbjct 95 A 95
Score = 63.9 bits (34), Expect = 6e-09
Identities = 58/70 (83%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 2331 GGCGCTGGAAAAGAAGAATGGTGAATATTTGCACGATCATAAGATTTTTCTTGGTGTGGC 2390
||| |||||||||||||||||||||||||||| | ||| ||||| |||| ||| ||
Sbjct 222 GGCACTGGAAAAGAAGAATGGTGAATATTTGCTCCATCGCAAGATAATTCTCAATGTTGC 281
Query 2391 TAAGACAGCT 2400
||||| ||||
Sbjct 282 TAAGATAGCT 291
> Ahg891097 jgi|Araly1|891097|Al_scaffold_0007_3083
Length=1356
Score = 137 bits (74), Expect = 4e-31
Identities = 117/137 (85%), Gaps = 6/137 (4%)
Strand=Plus/Plus
Query 2219 ATTTCTTC-AATGATGTTGGAGAAGTTGTTAGTGTTCGACTTATTGTAAGCCCCGAGAGT 2277
|||||||| || |||||||| ||||||||||||||||||| ||||||| | ||| ||
Sbjct 626 ATTTCTTCGAA-AATGTTGGAAAAGTTGTTAGTGTTCGACTCATTGTAAACAGTGAGGGT 684
Query 2278 AAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTCCTTG-CTTAGCAAACATGGCGC- 2335
|||||||||||||||||||||||||||||||||||| || | | |||||| | ||| |
Sbjct 685 AAGCATGTGGGCTATGGCTTTGTTGAGTTTGCTTCTGCT-GACAAAGCAAAGAAGGC-CA 742
Query 2336 TGGAAAAGAAGAATGGT 2352
|||||| ||||||||||
Sbjct 743 TGGAAACGAAGAATGGT 759
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 104367271300
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5