BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G48870.1
Length=3157
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485240 jgi|Araly1|485240|fgenesh2_kg.5__1232__AT3G48870.1 5035 0.0
Ahg495156 jgi|Araly1|495156|fgenesh2_kg.8__972__AT5G50920.1 1945 0.0
Ahg484935 jgi|Araly1|484935|fgenesh2_kg.5__927__AT3G45450.1 846 0.0
> Ahg485240 jgi|Araly1|485240|fgenesh2_kg.5__1232__AT3G48870.1
Length=3106
Score = 5035 bits (2726), Expect = 0.0
Identities = 2989/3115 (96%), Gaps = 22/3115 (1%)
Strand=Plus/Plus
Query 39 TCTTCTTCACTTTCCTATCTCTTTCCCAATAAAAGGAGTCTCTCGCTTTCTCCAACTTCG 98
|||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||
Sbjct 1 TCTTCTTCACTTTCCTATCTCTATCCCATTAAAAGGAGTCTCTCGCTTTCTCGAACTTCT 60
Query 99 CTATCCAAAGGCGTCGA--C-GCCTCCAACATTGCATCATGGCTTGGTCG-ATAGCTCTT 154
||||||||||||||||| | |||||||||| |||||||||||||| | ||||| ||
Sbjct 61 CTATCCAAAGGCGTCGACGCAGCCTCCAACA---CATCATGGCTTGGT-GTGTAGCTGTT 116
Query 155 CTT-ACACCTCCtttttttGGTCCCGGAAGGCATGTGCAGGCCAAAGAATACAGGGAACC 213
|| | | ||||||| ||||||||||||||||||||||| ||| |||||||||| ||||
Sbjct 117 -TTGAAAGCTCCTTTATTTGGTCCCGGAAGGCATGTGCAAGCCGAAGAATACAGAAAACC 175
Query 214 AAGAGGGTGTGTGATGAAGATGAGCAGTTTAAAAGCACCTGTTCTGAGAATTCAGGCCAC 273
|||||||||||||| || |||| |||||||| ||||||||| |||||||||||||||||
Sbjct 176 AAGAGGGTGTGTGAAGATGATGTGCAGTTTACAAGCACCTGGTCTGAGAATTCAGGCCAA 235
Query 274 AGAATACAGAGAACCAAGAGGGCGTGTGAAGATGATGTCCAGTTTACAAGCACCTCTTCT 333
|||||||||| ||||||||||| ||||||||||||||| |||||||||||||||| ||||
Sbjct 236 AGAATACAGAAAACCAAGAGGGTGTGTGAAGATGATGTGCAGTTTACAAGCACCTGTTCT 295
Query 334 GACAATTCAGAGCTTCTCAGGGTTAAGGGCCCCCAGTGCATTAGATTATTTGGGAAGGCC 393
|| |||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||
Sbjct 296 GAAAATTCAGAGCTTCTCAGGGTTAAGGGCCCCCAATGCATTAGATTATATGGCAAGGCC 355
Query 394 TAGTCCAGGTTTCCTTGTTAAGTATAAACTTGCAAAATCATCTGGGAGAGAAAAAGCTAG 453
| ||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||
Sbjct 356 TTGTCCAGGTTTCCTTGTTAAGTTTAAACTTGCAATATCATCTCGGAGAGAAAAAGCTAG 415
Query 454 CCGATGTGTACCCAAAGCAATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAAT 513
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 416 CCGATTTGTACCCAAAGCAATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAAT 475
Query 514 GCTGTCTCAAGAGGAAGCTCGGAGACTTGGCCATAACTTTGTTGGGACTGAGCAAATACT 573
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 476 GCTGTCTCAAGAGGAAGCTCGTAGACTTGGCCATAACTTTGTTGGGACTGAGCAAATACT 535
Query 574 GTTGGGTCTAATTGGAGAAGGGACTGGGATTGCCGCCAAGGTTCTTAAATCCATGGGGAT 633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 GTTGGGTCTAATTGGAGAAGGGACTGGGATTGCCGCCAAGGTTCTTAAATCCATGGGGAT 595
Query 634 CAATCTTAAAGATTCACGCGTGGAAGTAGAAAAGATAATTGGGAGAGGCAGTGGATTCGT 693
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 596 CAATCTTAAAGATTCACGCGTGGAAGTGGAAAAGATAATTGGGAGAGGCAGTGGATTTGT 655
Query 694 GGCAGTGGAGATTCCATTTACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGA 753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 656 GGCAGTGGAGATTCCATTTACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGA 715
Query 754 AGCTCGACAACTTGGGCATAACTACATTGGTTCAGAGCACCTTTTGCTTGGTCTACTTCG 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 AGCTCGACAACTTGGGCATAACTACATTGGTTCAGAGCACCTTTTGCTTGGTCTACTTCG 775
Query 814 TGAAGGGGAGGGTGTGGCAGCTCGTGTCTTGGAGAATTTGGGTGCAGATCCTAGTAATAT 873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TGAAGGGGAGGGTGTGGCAGCTCGTGTCTTGGAGAATTTGGGTGCAGATCCTAGTAATAT 835
Query 874 ACGGACACAGGTTATACGTATGGTCGGGGAAAACAATGAAGTCACAGCAAGCGTTGGTGG 933
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 CCGGACACAGGTTATACGTATGGTCGGGGAAAACAATGAAGTCACAGCAAGCGTTGGTGG 895
Query 934 GGGAAGCAGCGGAAACAGCAAAATGCCAACACTTGAAGAGTATGGGACTAACTTAACTAA 993
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 896 GGGAAGCAGCGGAAACAGCAAAATGCCAACACTAGAAGAGTATGGGACTAACTTAACTAA 955
Query 994 ACTAGCAGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGT 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 ACTAGCAGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGT 1015
Query 1054 GGTCCAGATCTTGGCTCGAAGAACCAAGAACAACCCATGTCTTATTGGAGAACCTGGAGT 1113
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1016 GGTCCAGATCTTGGCTCGAAGAACCAAGAACAACCCGTGTCTTATTGGAGAACCTGGAGT 1075
Query 1114 TGGTAAGACGGCAATAGCAGAAGGACTTGCACAGCGAATAGCTAGTGGTGATGTTCCTGA 1173
||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||
Sbjct 1076 TGGTAAGACAGCAATAGCGGAAGGTCTTGCACAGCGAATTGCTAGTGGTGATGTTCCTGA 1135
Query 1174 AACAATCGAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAA 1233
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1136 AACAATTGAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAA 1195
Query 1234 ATACCGTGGAGAGTTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGA 1293
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 ATACCGTGGAGAATTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGA 1255
Query 1294 TGAGATAATTCTGTTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGG 1353
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TGAGATAATTCTATTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGG 1315
Query 1354 TGCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTAT 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1316 TGCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTAT 1375
Query 1414 TGGTGCAACAACAATTG-ATGAGTACAGGAAACACATTGAGAAAGATCCTGCATTGGAGA 1472
||||||||||||| | | ||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1376 TGGTGCAACAACA-TCGGATGAGTACAGGAAGCACATTGAGAAAGATCCTGCATTGGAGA 1434
Query 1473 GACGGTTCCAGCCTGTGAAAGTACCTGAACCAACTGTAGAAGAAGCTATACAGATTTTGC 1532
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1435 GACGTTTCCAGCCTGTGAAGGTACCTGAACCAACTGTAGAAGAAGCTATACAGATCTTGC 1494
Query 1533 AAGGTCTGCGTGAGCGCTATGAGATCCACCACAAACTTCGATACACTGATGAAGCCTTGG 1592
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1495 ACGGTCTGCGTGAGCGCTATGAGATCCACCACAAACTTCGGTACACTGATGAAGCCTTGG 1554
Query 1593 TTGCTGCTGCACAATTGTCACATCAGTACATCAGTGATCGGTTTCTTCCCGACAAAGCGA 1652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TTGCTGCTGCACAATTGTCACATCAGTACATCAGTGATCGGTTTCTTCCCGACAAAGCGA 1614
Query 1653 TTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTACGCCATGCTCAGCTTCCTGAGG 1712
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1615 TTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTACGCCATGCTCAGGTACCTGAGG 1674
Query 1713 AAGCTAGAGAGCTTGAAAAGCAACTCAGGCAAATCACCAAAGAGAAGAATGAAGCTGTGC 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1675 AAGCTAGAGAGCTTGAAAAGCAACTCAGGCAAATCACCAAAGAGAAGAATGAAGCTGTGC 1734
Query 1773 GAAGCCAAGACTTCGAGATGGCTGGTTCTCATCGTGACCGTGAAATAGAGCTCAAGGCTG 1832
|| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1735 GAGGCCAAGACTTTGAGATGGCTGGTTCTCATCGTGACCGTGAAATAGAGCTCAGGGCTG 1794
Query 1833 AGATAGCTAATGTTTTATCTCGAGGCAAAGAAGTGGCCAAAGCCGAGAATGAAGCTGAGG 1892
||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 1795 AGATAGCTAATGTTTTAGCTTTAGGCAAAGAAGTGGCCAAAGCCGAGAATGAAGCTGAGG 1854
Query 1893 AAGGAGGACCTACTGTCACAGAATCTGACATCCAACACATCGTCGCCACCTGGACAGGAA 1952
||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct 1855 AAGGAGGACCTACTGTCACAGAATCCGACATCCAACACATTGTTGCCACCTGGACAGGAA 1914
Query 1953 TCCCGGTAGAGAAAGTCTCGTCTGATGAATCTAGCCGTCTTCTCCAAATGGAGCAGACCC 2012
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1915 TCCCAGTAGAGAAAGTCTCGTCTGATGAATCTAGCCGTCTTCTCCAAATGGAGCAGACCC 1974
Query 2013 TTCACACAAGAGTCATTGGCCAAGATGAAGCCGTTAAAGCAATCAGTCGGGCTATCCGCC 2072
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1975 TTCACACAAGAGTCATTGGCCAAGATGAAGCCGTTAAAGCAATCAGCCGGGCTATCCGCC 2034
Query 2073 GTGCCCGTGTTGGGCTCAAAAACCCAAACCGTCCTATCGCCAGTTTCATCTTCTCTGGTC 2132
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2035 GTGCCCGTGTTGGACTCAAGAACCCAAACCGTCCTATCGCCAGTTTCATCTTCTCTGGTC 2094
Query 2133 CAACTGGTGTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCTGCTTACTACTTCGGTTCAG 2192
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2095 CAACTGGTGTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCTGCTTACTACTTTGGTTCAG 2154
Query 2193 AAGAAGCAATGATCCGTCTTGACATGAGTGAGTTCATGGAACGACACACTGTTTCGAAAC 2252
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 2155 AAGAAGCAATGATACGTCTTGACATGAGTGAGTTCATGGAACGGCACACTGTTTCAAAAC 2214
Query 2253 TCATCGGTTCACCTCCTGGTTACGTAGGATACACAGAAGGAGGTCAGTTAACAGAGGCGG 2312
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 2215 TCATTGGTTCACCTCCTGGTTACGTAGGATACACAGAAGGCGGTCAGTTAACTGAGGCGG 2274
Query 2313 TTCGACGCAGGCCCTACACTCTTGTTCTCTTTGACGAAATTGAGAAAGCACATCCCGATG 2372
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 2275 TTCGACGCAGGCCCTACACACTTGTTCTCTTTGACGAAATTGAGAAAGCACATCCTGATG 2334
Query 2373 TTTTCAACATGATGCTTCAGATCCTAGAAGACGGTAGACTAACTGATAGCAAAGGAAGAA 2432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2335 TTTTCAACATGATGCTTCAGATCCTAGAAGACGGTAGACTAACTGATAGCAAAGGAAGAA 2394
Query 2433 CTGTCGATTTCAAGAACACGCTTCTGATCATGACTTCAAACGTAGGGAGCAGCGTGATCG 2492
||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct 2395 CTGTCGATTTCAAGAACACGCTTCTTATCATGACTTCAAATGTAGGAAGCAGCGTGATCG 2454
Query 2493 AAAAAGGTGGTAGAAGAATTGGGTTTGATCTTGACCACGACGAGAAAGACAGCAGTTACA 2552
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2455 AAAAAGGTGGTAGAAGAATCGGGTTTGATCTTGACCATGACGAGAAAGACAGCAGTTACA 2514
Query 2553 ACAGAATCAAGAGCTTAGTGACTGAGGAACTAAAACAGTATTTCAGACCAGAGTTCTTGA 2612
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2515 ACAGAATCAAGAGCTTAGTGACTGAGGAACTAAAACAATATTTCAGACCGGAGTTCTTGA 2574
Query 2613 ACAGGTTAGATGAGATGATTGTTTTCAGACAGTTAACAAAGCTGGAAGTCAAGGAGATTG 2672
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 2575 ACAGGTTAGATGAGATGATTGTTTTCAGACAGTTGACAAAGCTGGAAGTCAAAGAGATTG 2634
Query 2673 CTGATATAATGCTTAAAGAAGTGGTGGCGAGACTTGAGGTCAAAGAGATTGAGCTTCAGG 2732
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2635 CTGATATAATGCTTAAAGAAGTGGTGGCGAGACTTGAGGACAAAGAGATTGAGCTTCAGG 2694
Query 2733 TGACTGAGAGGTTTAAAGAGA-GAGTGGTGGATGAAGGATTCGACCCGAGTTATGGTGCG 2791
| ||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||
Sbjct 2695 TAACTGAGAGGTTTAAAGA-ACGAGTGGTGGATGAAGGATTCGACCCAAGTTATGGCGCG 2753
Query 2792 AGGCCACTTAGACGTGCAATAATGAGGCTTTTGGAGGATAGTATGGCGGAGAAGATGCTT 2851
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2754 AGGCCGCTTAGACGTGCAATTATGAGGCTTTTGGAGGATAGTATGGCGGAGAAGATGCTT 2813
Query 2852 TCAAGGGACATTAAAGAAGGAGATTCTGTGATTGTTGATGTTGATGCCGAAGGAAGTGTG 2911
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2814 TCAAGGGACATTAAAGAAGGAGATTCTGTGATTGTTGATGTTGATGCGGAAGGAAGTGTG 2873
Query 2912 GTTGTGTTGAGTGGTACCA-C--TGGACGTGTTGGTGGTTTTGCTGCTGAAGAAGCCATG 2968
|||||||||||||||| || | |||||||| ||||||||||||||||||||||||||||
Sbjct 2874 GTTGTGTTGAGTGGTAACAACAGTGGACGTGCTGGTGGTTTTGCTGCTGAAGAAGCCATG 2933
Query 2969 GAAGATCCTATTCCAATATTGTAGAAGGAAACAAGGGGTTTTCTAGTGATT-TTCTTTT- 3026
|||||||| |||||||||||||||||||||||||||| |||||||| |||| || ||||
Sbjct 2934 GAAGATCCAATTCCAATATTGTAGAAGGAAACAAGGGTTTTTCTAGAGATTATT-TTTTC 2992
Query 3027 AAGTGTTATTGAATTGACTATTGAGTCTCTTAT-GATTCGTATTTTGTACTCTAATCTCT 3085
||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||
Sbjct 2993 AAGTGTTATTGAATTGACTATTGAGTCTCTT-TCGATTCGTATTTTGTACTTTAATCTCT 3051
Query 3086 TTGTTTCTGGATAATGACTGTTCGGGAACCACAGAGAATTTCCCACaaaaaaaaa 3140
||||||||||||| ||| |||| ||||| || ||||||||||||||| |||||||
Sbjct 3052 TTGTTTCTGGATATTGATTGTTTGGGAATCATAGAGAATTTCCCACACAAAAAAA 3106
> Ahg495156 jgi|Araly1|495156|fgenesh2_kg.8__972__AT5G50920.1
Length=3143
Score = 1945 bits (1053), Expect = 0.0
Identities = 2018/2479 (81%), Gaps = 85/2479 (3%)
Strand=Plus/Plus
Query 467 AAAGCAATGTTTGAGCGTTTTACCGAGAAAGCAATTAAGGTCATAATGC-TGTCTCAAGA 525
|||||||||||||| | ||||| || ||||| || || || || |||| || |||| ||
Sbjct 429 AAAGCAATGTTTGAAAGATTTACTGAAAAAGCTATCAAAGTTATTATGCTTG-CTCAGGA 487
Query 526 GGAAGCTCGGAGACTTGGCCATAACTTTGTTGGG-ACTGAGCAAATACTGT-TGGGTCTA 583
||||||| | ||||| ||||| || |||| |||| || || ||||| || | | |||||
Sbjct 488 GGAAGCTAGAAGACTAGGCCACAATTTTG-TGGGAACCGAACAAATTCT-TCTAGGTCTC 545
Query 584 ATTGGAGAAGGG-ACTGGGATTGCCGCCAAGGTTCTT-AAATCCATGGGGATCAATCTTA 641
||||| | |||| ||||| ||||| || || ||| || |||||||||||||| || ||||
Sbjct 546 ATTGGTG-AGGGTACTGGAATTGCTGCTAAAGTT-TTGAAATCCATGGGGATTAACCTTA 603
Query 642 AAGATTCACGCGTGGAAGTAGAAAAGATAATTGGGAGAGGCAGTGGATTCGTGGCAGTGG 701
||||| |||| ||||| ||||| ||||| ||||| || |||||||| || || || || |
Sbjct 604 AAGATGCACGTGTGGAGGTAGAGAAGATTATTGGAAGGGGCAGTGGCTTTGTTGCTGTTG 663
Query 702 AGATTCCATTTACTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGAAGCTCGAC 761
|||| ||||| |||||||| |||||||| || || || | ||||| ||||||||||| |
Sbjct 664 AGATCCCATTCACTCCTCGTGCAAAGCGTGTTCTTGAACTCTCACTGGAGGAAGCTCGCC 723
Query 762 AACTTGGGCATAACTACATTGGTTCAGAGCACCTT-TTGCTTGG-TCTACTTCGTGAAGG 819
||||||| || || |||||||| || ||||||||| || ||||| | | || ||||||||
Sbjct 724 AACTTGGTCACAATTACATTGGATCCGAGCACCTTCTT-CTTGGAT-TGCTACGTGAAGG 781
Query 820 GGAGGGTGTGGCAGCTCGTGTCTTGGAGAATTTGGGTGCAGATCCTAGTAATATACGGAC 879
|| ||||| |||||||||||| |||| ||||| |||||||||||||||||||| || ||
Sbjct 782 TGAAGGTGTTGCAGCTCGTGTCCTGGAAAATTTAGGTGCAGATCCTAGTAATATTCGCAC 841
Query 880 ACAGGTTATACGTATGGTCGGG-GAAAACAATGAAGTCACAGC-AAGCGTTGGTGGG-GG 936
||||| ||||| ||||| ||| || |||||||| || || || || ||||| ||| ||
Sbjct 842 TCAGGTGATACGCATGGT-GGGTGAGAACAATGAGGTAACTGCTAA-TGTTGG-GGGAGG 898
Query 937 AAGCAGCGGAAACAGCAAAATGCCAACACTTGAAGAGTATGGGACTAACTTAACTAAACT 996
||||||| | || || |||||||| ||||||||||| ||||| ||||| || |||||
Sbjct 899 AAGCAGC---AGCAATAAGATGCCAACTCTTGAAGAGTACGGGACAAACTTGACGAAACT 955
Query 997 AGCAGAGGAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGTGGT 1056
|| |||||||||||| |||| || ||||||||||||||||||||||| ||||| |||||
Sbjct 956 GGCTGAGGAGGGTAAATTGGACCCAGTTGTTGGAAGGCAGCCACAGATAGAACGTGTGGT 1015
Query 1057 CCAGA-TCTTGGCTCGAAGAACCAAGAACAACCCATGTCTTATTGGAGAACCTGGAGTTG 1115
|| | ||||||| | ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1016 ACAAATTCTTGGC-AGGAGAACCAAGAACAACCCTTGTCTTATTGGAGAACCTGGTGTTG 1074
Query 1116 GTAAGACGGCAATAGCAGAAGGACTTGCACAGCGAATAGCTAGTGGTGATGTTCCTGAAA 1175
||||||| || || || ||||||||||| ||||| || || ||||| |||||||||||||
Sbjct 1075 GTAAGACAGCTATTGCTGAAGGACTTGCGCAGCGTATTGCCAGTGGAGATGTTCCTGAAA 1134
Query 1176 CAATCGAGGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAAAT 1235
| || || ||||||| ||||||||| ||||| |||||||||||||| |||||||| ||||
Sbjct 1135 CCATTGAAGGGAAGAAGGTTATAACACTTGACATGGGTCTTCTAGTTGCTGGAACAAAAT 1194
Query 1236 ACCGTGGAGAGTTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGATG 1295
| ||||||||||| || || ||||| |||||||||||||||||||| || || || || |
Sbjct 1195 ATCGTGGAGAGTTTGAAGAGAGATTAAAGAAGCTTATGGAGGAAATAAGACAGAGCGACG 1254
Query 1296 AGATAATTC-TGTTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGGT 1354
|||||| || | ||||| ||||||||||| || | || || || ||||| || ||||||
Sbjct 1255 AGATAA-TCTTATTTATCGATGAAGTGCATACTTTGATTGGGGCTGGAGCAGCGGAAGGT 1313
Query 1355 GCGATCGATGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTATT 1414
|| || ||||| |||||||| ||||| |||||||| || ||||||||||||||||| |||
Sbjct 1314 GCAATTGATGCAGCTAACATTTTAAAACCAGCTCTCGCTAGAGGTGAATTGCAGTGCATT 1373
Query 1415 GGTGCAACAACAATT-GATGAGTACAGGAAA-CACATTGAGAAAGATCCTGCATTGGAGA 1472
|| || ||||| ||| ||||| ||| |||| |||||||||||||| ||||| ||||| |
Sbjct 1374 GGAGCGACAAC-ATTAGATGAATAC-CGAAAGCACATTGAGAAAGACCCTGCGTTGGAAA 1431
Query 1473 GACGGTTCCAGCCTGTGAAAGTACCTGAACCAACTGTAGAAGAAGCTATACAGATT-TTG 1531
|| | |||||||| ||||||||||||||||| || || || ||| |||| |||||| ||
Sbjct 1432 GAAGATTCCAGCCGGTGAAAGTACCTGAACCTACCGTGGATGAAACTATTCAGATTCTT- 1490
Query 1532 CAA-GGTCTGCGTGAGCGCTATGAGATCCACCACAAACTTCGATACACTGATGAAGCCTT 1590
|| |||||||| ||| | ||||| || |||||||| ||||| |||||||| || | ||
Sbjct 1491 -AAGGGTCTGCGAGAGAGATATGAAATTCACCACAAGCTTCGTTACACTGACGATTCTTT 1549
Query 1591 GGTTGCTGCTGCACAATTGTCACATCAGTACATCAGTGATCGGTTT-CTTCCCGACAAAG 1649
|| || |||||||| |||||| | ||||| || ||||||| |||| ||||| ||||| |
Sbjct 1550 AGTAGCAGCTGCACAGTTGTCATACCAGTATATTAGTGATC-GTTTCCTTCCTGACAAGG 1608
Query 1650 CGATTGACTTGATTGATGAAGCTGGGTCTCGGGTTCGACTACGCCATGCTCAGCTTCCTG 1709
| ||||||||||| ||||||||||| |||||||||||||| || ||||| ||| | ||||
Sbjct 1609 CAATTGACTTGATCGATGAAGCTGGTTCTCGGGTTCGACTTCGTCATGCACAGGTCCCTG 1668
Query 1710 AGGAAGCTAGAGAGCTTGAAAAGCAACTCAGGCAAATCACCAAA-GAGAAGAATGAAGCT 1768
|||||||||| |||||||| ||| | || ||||| || | |||| |||||||||||||||
Sbjct 1669 AGGAAGCTAGGGAGCTTGAGAAGGAGCTTAGGCAGAT-AACAAAGGAGAAGAATGAAGCT 1727
Query 1769 GTGCGAAGCCAAGACTTCGAGATGGCTGGTTCTCATCGTGACCGTGAAATAGAGCTCAAG 1828
|| || |||||||||| |||| |||||| | | ||| || | ||||| || ||| ||
Sbjct 1728 GTCCGTGGCCAAGACTTTGAGAAGGCTGGGACACTTCGGGATAGAGAAATTGAACTC-AG 1786
Query 1829 -GCTGAGATAGCTAATGTTTTATCTCGAGGCAAAGAAG-TG-GCCAAAGCCGAGAATGAA 1885
|||||| || || | | | | ||| ||| || || | |||||| |||| || |
Sbjct 1787 AGCTGAGGTATCTGCTATCCAAGCGAAAGG-TAAGGAGATGAG-CAAAGCAGAGAGTG-A 1843
Query 1886 G-CTGAG-GAAGG-AGGACCTACT-GTCACAGAATCTGACATCCAACACATCGTCGCCAC 1941
| ||| | | ||| ||| |||| | ||||| || || |||||||||||||| || | |
Sbjct 1844 GACTG-GTG-AGGAAGGTCCTA-TGGTCACGGAGTCAGACATCCAACACATTGTATCTTC 1900
Query 1942 CTGGACAGG-AATCCCGGTAGAGAAAGTCTCGTCTGATGAATCTAG-CCGTCTTCTCCAA 1999
||||| || | |||| ||||||||||| || ||||||| ||| | || || || |||
Sbjct 1901 ATGGACTGGTATTCCC-GTAGAGAAAGTATCAACTGATGAGTCT-GATCGCCTCCT-CAA 1957
Query 2000 -ATGG-AGCAGACCCTTCACACAA-G-AGTCATTGGCCAAGATGAAGCCGTTAAAGCAAT 2055
|||| || | ||||| |||| || | | |||| |||||||| ||||| || ||||| ||
Sbjct 1958 GATGGAAG-AAACCCTCCACA-AACGTA-TCATAGGCCAAGACGAAGCTGTGAAAGCCAT 2014
Query 2056 CAGTCGGGCTATCCGCCGTGCCCGTGTTGGGCTCAAAAACCCAAACCGTCCTATCGCCAG 2115
|| || || || |||||||| |||||||| ||||| ||||| |||||||| || || ||
Sbjct 2015 AAGCCGAGCCATTCGCCGTGCACGTGTTGGACTCAAGAACCCTAACCGTCCAATAGCTAG 2074
Query 2116 TTTCATCTTCTCTGGTCCAACTGGTGTTGGGAAATCAGAGCTTGCTAAGGCCTTGGCTGC 2175
|||||| ||||| |||||||| |||||||||||||| |||||||| || | ||||| ||
Sbjct 2075 TTTCATATTCTCGGGTCCAACCGGTGTTGGGAAATCCGAGCTTGCCAAAACTTTGGCAGC 2134
Query 2176 TTACTACTTCGGTTCAGAAGAAGCAATGATCCGTCTTGACATGAGTGAGTTCATGGA-AC 2234
|||||||||||| || || ||||| ||||| ||||| || ||||||||||||||||| |
Sbjct 2135 TTACTACTTCGGCTCTGAGGAAGCCATGATTCGTCTAGATATGAGTGAGTTCATGGAGA- 2193
Query 2235 GACACACTGTTTCGAAACTCATCGGTTCACCTCCTGGTTACGTAGGATACACAGAAGGAG 2294
| |||||||| || |||||||| || ||||||||||| ||||| || |||||||||||||
Sbjct 2194 GGCACACTGTCTCCAAACTCATTGGATCACCTCCTGGATACGTCGGGTACACAGAAGGAG 2253
Query 2295 GTCAGTTAACAGAGGCGGTTCGACGCAGGCCC-TACACTC-TTGTTCTCTTTGACGAAAT 2352
||||| ||||||| || ||| | || |||| ||||| | | ||||| || ||||| ||
Sbjct 2254 GTCAGCTAACAGAAGCAGTTAGGCG-TCGCCCTTACAC-CGTCGTTCTATTCGACGAGAT 2311
Query 2353 TGAGAAAGCACATCCCGATGTTTTCAACATGATGCTTCAGATCCTAGAAGACGGTAGACT 2412
|| ||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| |
Sbjct 2312 CGAAAAAGCCCATCCAGATGTTTTCAACATGATGCTTCAAATCCTTGAAGACGGTAGATT 2371
Query 2413 AACTGATAGCAAAGGAAGAACTGTCGATTTCAAGAACACGCTTCTGATCATGACTTCAAA 2472
||| || |||||||||||||| || || ||||| ||||| ||||| |||||||| |||||
Sbjct 2372 AACAGACAGCAAAGGAAGAACAGTTGACTTCAAAAACACACTTCTCATCATGACATCAAA 2431
Query 2473 CGTAGGGAGCAGCGTGATCGAAAAAGGTGGTAGAAGAATTGGGTTTGATCTT-GACCACG 2531
||| || |||||||||||||||||||| || ||| | || ||||| || ||| || |||
Sbjct 2432 CGTTGGAAGCAGCGTGATCGAAAAAGGAGGAAGACGTATCGGGTTCGA-CTTAGATTACG 2490
Query 2532 ACGAGAAAGACAGCAGTTACAACAGAATCAAGAGC-TTAGTGACTGAGGAACTAAAACAG 2590
||||||||||||||||||||||||||||||||||| || ||||| ||||| || ||||||
Sbjct 2491 ACGAGAAAGACAGCAGTTACAACAGAATCAAGAGCCTT-GTGACCGAGGAGCTGAAACAG 2549
Query 2591 TATTTCAGACCAGAGTTCTTGAACAGGTTAGATGAGATGATTGTTTTCAGACAGTTAACA 2650
|| |||||||| ||||||||||||||| |||| ||||||||||| ||||||||| |||||
Sbjct 2550 TACTTCAGACCCGAGTTCTTGAACAGGCTAGACGAGATGATTGTGTTCAGACAGCTAACA 2609
Query 2651 AAGCTGGAAGTCAAGGAGATTGCTGATATAATGCTTAAAG-AAGTGGTGGCGAGACTTGA 2709
|| |||||||| || || |||||||| ||| || || ||| ||||| | | ||| || |
Sbjct 2610 AAACTGGAAGTGAAAGAAATTGCTGACATACTG-TTGAAGGAAGTGTTCGAGAGG-TTAA 2667
Query 2710 GGTCA-AAG-AGATTGAGCTTCAGGTGACTGAGAGGTTTAAAGAGAGAGTGGTGGATGAA 2767
| | ||| |||| ||||| ||||||||||||||||| ||||||||||| || || |||
Sbjct 2668 AGA-AGAAGGAGATCGAGCTCCAGGTGACTGAGAGGTTCAAAGAGAGAGTAGTAGACGAA 2726
Query 2768 GGATTCGA-CCCGAGTTATGGTGCGAGGCCACTT-AGACGTGCAATAATGAGGCTTTTGG 2825
|| || | |||||| ||||| ||||| || || ||| | || || ||||||||||| |
Sbjct 2727 GG-TTATAACCCGAGCTATGGAGCGAGACCG-TTGAGAAGAGCCATCATGAGGCTTTTAG 2784
Query 2826 AGGATAGTATGGCGGAGAAGATGCTTTCAAGGGACATTAAAGAAGGAGATTCTGTGATTG 2885
||||||||||||| ||||| |||||| | || || |||||||||||||| || |||||||
Sbjct 2785 AGGATAGTATGGCAGAGAAAATGCTTGCGAGAGAGATTAAAGAAGGAGACTCGGTGATTG 2844
Query 2886 TTGATGTTGATGCCGAAGG 2904
| || ||||| || |||||
Sbjct 2845 TGGACGTTGACGCTGAAGG 2863
> Ahg484935 jgi|Araly1|484935|fgenesh2_kg.5__927__AT3G45450.1
Length=1110
Score = 846 bits (458), Expect = 0.0
Identities = 586/645 (91%), Gaps = 20/645 (3%)
Strand=Plus/Plus
Query 884 GTTATACGTATGGTCGGGGAAAACAATGAAGTCACAGCAAGCGTTGGTGGGGGAAGCAGC 943
||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| || |
Sbjct 385 GTTATACGTATGGTCGGGGGAAACAATGAAGTCACATCAAGCGTTGGTGGAGGAAACATC 444
Query 944 GGAAACAGCAAAATGCCAACACTTGAAGAGTATGGGACTAACTTAACTAAACTAGCAGAG 1003
|||||||| |||| ||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct 445 GGAAACAG---AATGGCAACACTAGAAGAGTATGGGACTAACTTAACTAAATTAGCAGAG 501
Query 1004 GAGGGTAAACTGGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGTGGTCCAGATC 1063
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 502 GAGGGTAAACTTGATCCGGTTGTTGGAAGGCAGCCACAGATCGAACGAGTGGTCCAGATC 561
Query 1064 TTGGCTCGAAGAACCAAGAACAACCCATGTCTTATTGGAGAACCTGGAGTTGGTAAGACG 1123
|||||||||||||| | ||||||||| |||||||||||||||| ||||||||| |||| |
Sbjct 562 TTGGCTCGAAGAACTAGGAACAACCCGTGTCTTATTGGAGAACGTGGAGTTGGAAAGA-G 620
Query 1124 -GCAATAGCAGAAGGACTTGCACAGCGAATAGCTAGTGGTGATGTTCCTGAAACAATCGA 1182
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 621 AGCAATAGCGGAAGGACTTGCACAGCGAATCCCTAGTGGTGATGTTCCTGAAACAATCAA 680
Query 1183 GGGGAAGACGGTTATAACCCTTGATATGGGTCTTCTAGTGGCTGGAACGAAATACCGTGG 1242
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 681 GGGGAAGACGGTTATAACCCTTGATAAGGGTCTTCTAGTGGCTGGAACAAAATACCGTGG 740
Query 1243 AGAGTTCGAGGAAAGATTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGATGAGATAAT 1302
||| | |||||||||| |||||||||||||||||||||||||||||||||| || |||||
Sbjct 741 AGAATCCGAGGAAAGACTGAAGAAGCTTATGGAGGAAATCAGGCAAAGTGAAGACATAAT 800
Query 1303 TCTGTTTATTGATGAAGTGCACACGCTCATCGGTGCAGGAGCCGCTGAAGGTGCGATCGA 1362
|||||||||||||||| |||||| |||||| ||| ||||||||||||||||||||| |||
Sbjct 801 TCTGTTTATTGATGAAATGCACATGCTCATTGGTACAGGAGCCGCTGAAGGTGCGACCGA 860
Query 1363 TGCTGCTAACATCTTAAAGCCAGCTCTAGCAAGAGGTGAATTGCAGTGTATTGGTGCAAC 1422
||||||||||||||||||||||||| |||||||||||||||||||| | || |||
Sbjct 861 TGCTGCTAACATCTTAAAGCCAGCTGTAGCAAGAGGTGAATTGCAGA--ACCGGA--AAC 916
Query 1423 AACAATTGATGAGTACAGGAAACACATTGAGAAAGATCCTGCATTGGAGAGACGGTTCCA 1482
||| | ||| | | ||||||||||||||||||||||||||||||||||| ||
Sbjct 917 T-CAAGT--TGA--A--G----CACATTGAGAAAGATCCTGCATTGGAGAGACGGTTTCA 965
Query 1483 GCCTGTGAAAGTACCTGAACCAACTGTAGAAGAAGCTATACAGAT 1527
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 966 GCCTGTGAAGGTACCTGAACCAACTGTAGAAGAAGCTATACAGAT 1010
Score = 388 bits (210), Expect = 1e-106
Identities = 271/300 (90%), Gaps = 6/300 (2%)
Strand=Plus/Plus
Query 473 ATGTTTGAGCGTTTTACCGAGAA-AGCAATTAAGGTCATAATGCTGTCTCAAGAGGAAGC 531
|||||||||||||||||||| || ||||||||||||||| |||||| || |||||||| |
Sbjct 1 ATGTTTGAGCGTTTTACCGA-AAGAGCAATTAAGGTCATTATGCTGGCTAAAGAGGAATC 59
Query 532 TCGGAGACTTGGCCATAACTTTGTTGGGACTGAGCAAATACTGTTGGGTCTAATTGGAGA 591
|||||| ||||| ||||||||||||||||||||||| |||||| | ||||||||||| ||
Sbjct 60 TCGGAGGCTTGGTCATAACTTTGTTGGGACTGAGCAGATACTGCTAGGTCTAATTGGGGA 119
Query 592 AGGGACTGGGATTGCCGCCAAGGTTCTTAAATCCATGGGGATCAATCTTAAAGATTCACG 651
|||||||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 120 AGGGACTGGGATCGCTGCAAAGGTTCTTAAATCCATGGGGATCAATCTTAAAGATTCACG 179
Query 652 CGTGGAAGTAGAAAAGATAATTGGGAGAGGCAGTGGATTC-GTGGCAGTGGAGATTCCAT 710
|||||||| |||||||||||||| |||||||||||||| ||| || |||||||||| |
Sbjct 180 TGTGGAAGTGGAAAAGATAATTGGAAGAGGCAGTGGATTTTGTG-CACTGGAGATTCC-T 237
Query 711 TTA-CTCCTCGCGCAAAGCGGGTGCTGGAGTTGTCACTAGAGGAAGCTCGACAACTTGGG 769
||| ||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct 238 TTAACTCCTCGAACAAAGCGTGTTCTGGATTTGTCACTAGAGGAAGCTCGACAACTTGGG 297
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119260557095
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5