BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G49630.1
Length=999
Score E
Sequences producing significant alignments: (Bits) Value
Ahg348065 jgi|Araly1|348065|fgenesh1_pg.C_scaffold_5001457 1312 0.0
Ahg494969 jgi|Araly1|494969|fgenesh2_kg.8__785__AT3G49620.1 1223 0.0
Ahg485319 jgi|Araly1|485319|fgenesh2_kg.5__1311__AT3G49620.1 1223 0.0
Ahg485377 jgi|Araly1|485377|fgenesh2_kg.5__1369__AT3G50210.3 872 0.0
Ahg949369 jgi|Araly1|949369|scaffold_801256.1 204 1e-51
> Ahg348065 jgi|Araly1|348065|fgenesh1_pg.C_scaffold_5001457
Length=1035
Score = 1312 bits (710), Expect = 0.0
Identities = 807/853 (95%), Gaps = 9/853 (1%)
Strand=Plus/Plus
Query 154 ATTGGTCATGGAATATCGGAGGATTTTATAAGGAAGGTGAGAGTG--ATGTCGCATCAAT 211
|||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||
Sbjct 185 ATTGGTCATGGAATATCGGAGGATCTTATAAAGAAGGTGAGAGTGATATGTCGAATCAAT 244
Query 212 TCTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAGATTACTCCAGCTGCTGGATACA 271
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 245 TCTTTGAGCTTCCTTATGAAGAGAAACTTAAGATCAAGATTAGGCCAGCTGCTGGATACA 304
Query 272 GAGGATATCAGAGAATCGGACTAAACTTAACGAATGGGAAACAAGATATGCACGAAGCCA 331
|||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||
Sbjct 305 GAGGATATCAGAGAATGGGACTAAACTTAACGAGTGGGAAACAAGACATGCACGAAGCCA 364
Query 332 TTGATTGTTACAAAGAGTTTAA-GCAAGGGAAGCATGGGGACATTGGAAAGGTTATGGAA 390
|||||||||||||||||||||| | |||||| | |||||||| ||||||||||| |||||
Sbjct 365 TTGATTGTTACAAAGAGTTTAATG-AAGGGACGTATGGGGACCTTGGAAAGGTTTTGGAA 423
Query 391 GGGGCAAACCAGTGGCCAGAGAATCCTCAAGAATACAAAGAGTTGATGGAGGAGTATATT 450
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 424 GGGCCAAACCAGTGGCCAGAGAATCCTCAAGAGTACAAAGAGTTGATGGAGGAGTATATT 483
Query 451 AAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGGGAATCTCATTAGCCCTTGGTGGA 510
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 484 AAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGGGAATCTCCTTAGCCCTTGGTGGA 543
Query 511 TCACCTTATGAGTTTGAGGGAAAGATGCTT--ACA-GATCCGTTTTGGATAATGCGTATT 567
||||||||||| |||||||||||||||||| | | || || ||||||||||||||||||
Sbjct 544 TCACCTTATGAATTTGAGGGAAAGATGCTTAGAGACGACCCTTTTTGGATAATGCGTATT 603
Query 568 CTTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGGATGTGGAGCTCACACTGACTAT 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 604 CTTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGGATGTGGAGCTCACACTGACTAT 663
Query 628 GGCTTGTTGTCACTTATAAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAGACTTG 687
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 664 GGCTTGTTGTCGCTTATAAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAGACTTG 723
Query 688 GCCGGCGATTGGATACCAGTTATTCCGATCCCTGGATCATTTGTCTGCAACATCGGTGAC 747
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 724 GCCGGCGATTGGACACCAGTGATTCCGATCCCTGGATCATTTGTCTGCAACATCGGTGAC 783
Query 748 ATGCTAAAGATTCTTTCTAACGGAGTTTACGAATCCACACTTCATAGAGTGATCAATAAC 807
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 784 ATGCTAAAGTTTCTTTCTAACGGAGTTTACGAATCCACACTTCATAGAGTGATCAATAAC 843
Query 808 TCTCCCCGATACCGTGTTTGCGTCGGATTCTTTTACGAGACGAACTTCGACGCAGCGGTG 867
||||| |||||||||||||||||||||||||| |||||||| |||||| |||| | ||||
Sbjct 844 TCTCCTCGATACCGTGTTTGCGTCGGATTCTTCTACGAGACTAACTTCAACGCGGTGGTG 903
Query 868 GAGCCGTTGGATATCTTCAAAGAGAAGTACCCAGGAAAAGGAACATCCCAAGTTTTCAAA 927
||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 904 GAGCCATTGGATATCTTCAAAGAGAAGTACCCAGTAAAAGGAACATCTCAAGTTTTCAAA 963
Query 928 AGAGTTGTCTATGGGGAGCATCTGGTTCACAAACTCCAGACCACTTTT-CAAAATTTAGT 986
||| |||||||||| |||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct 964 AGAATTGTCTATGGAGAGCATCTGGTTCACAAACTGCAGACCACCTTTACAAA-TTTAGT 1022
Query 987 GGAACACAGTTAA 999
|||||||||||||
Sbjct 1023 GGAACACAGTTAA 1035
Score = 217 bits (117), Expect = 2e-55
Identities = 142/154 (92%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 1 ATGGCGACAAACTTCAAATCCCTATTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAA 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACAAACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAA 60
Query 61 TGTGATGATGCCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGTG-GGAAAGCTGGA 119
||||||||| | |||||||| |||||||||| |||||| |||||||| ||||| |||||
Sbjct 61 TGTGATGATTCGAACATGGCCGAGGATGCCGACGTGGCAAAGGTTGTGAGGAAA-CTGGA 119
Query 120 CAGGGCCTGTCGGGACGCAGGATTCTTCTACGTA 153
|| |||||||||||| || |||||||||||||||
Sbjct 120 CAAGGCCTGTCGGGATGCCGGATTCTTCTACGTA 153
> Ahg494969 jgi|Araly1|494969|fgenesh2_kg.8__785__AT3G49620.1
Length=1187
Score = 1223 bits (662), Expect = 0.0
Identities = 886/995 (89%), Gaps = 12/995 (1%)
Strand=Plus/Plus
Query 11 ACTTCAAATCCCTATTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAATGTGATGATG 70
|||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 124 ACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTACTGGCCAAATGTGATGATT 183
Query 71 CCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGTGGGAAAGCTGGACAGGGCCTGTC 130
| ||||||| |||||||||| || ||||| ||||| ||| || |||||||| ||||
Sbjct 184 TCGACATGGCTAAGGATGCCGGGGTTGCGGAAGTTGTCAAAAAACTAGACAGGGCATGTC 243
Query 131 GGGACG-CAGGATTCTTCTACGTAATTGGTCATGGAATATCGGAGGATTTTATAAGGAAG 189
|||||| | |||||||||||||| ||||||||||||||||||| ||| |||||| ||||
Sbjct 244 GGGACGTC-GGATTCTTCTACGTGGTTGGTCATGGAATATCGGATGATCTTATAAAGAAG 302
Query 190 GTGAGAGTGATGTCGCATCAATTCTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAG 249
||||||| | || |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 303 GTGAGAGAGGTGACGCATCAATTTTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAG 362
Query 250 ATTACTCCAGCTGCTGGATACAGAGGATATCAGAGAATCGGACTAAACTTAACGAA-TGG 308
||||||||||||| ||| |||||||||||||||||||| ||| |||| || || || |||
Sbjct 363 ATTACTCCAGCTGGTGGTTACAGAGGATATCAGAGAATTGGAGTAAATTTTAC-AAGTGG 421
Query 309 GAAACAAGATATGCACGAAGCCATTGATTGTTACAAAGAGTTTAAGCAAGGGAAGCATGG 368
||||||||||||||||||||||||||||||||||| |||||| |||||||||| | ||||
Sbjct 422 GAAACAAGATATGCACGAAGCCATTGATTGTTACAGAGAGTTCAAGCAAGGGAGGTATGG 481
Query 369 GGACATTGGAAAGGT-TATGGAAGGGGCAAACCAGTGGCCAGAGAATCCTCAAGAATACA 427
||||||||||||||| | |||||||| ||||||| ||||||| |||||||||||| ||||
Sbjct 482 GGACATTGGAAAGGTCT-TGGAAGGGTCAAACCATTGGCCAGGGAATCCTCAAGAGTACA 540
Query 428 AAGAGTTGATGGAGGAGTATATTAAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGG 487
|||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||
Sbjct 541 AAGATTTGATGGAGGAGTACATTAAGCTATGCACAGATCTTTCTAGAAATATCTTAAGGG 600
Query 488 GAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAAGATGCTTA-CAGAT 546
||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||
Sbjct 601 GAATCTCCTTAGCCCTTGGTGGATCACCTTATGAGTTCGAGGGAAAGATGCTTAGC-GAC 659
Query 547 CCGTTTTGGATAATGCGTATTC-TTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGG 605
|| |||||| |||||||||| | |||||||||||||||||||||||||||||||||| ||
Sbjct 660 CCTTTTTGGGTAATGCGTAT-CATTGGTTATCCAGGTGTAAACCAAGAAAATGTTATTGG 718
Query 606 ATGTGGAGCTCACACTGACTATGGCTTGTTGTCACTTATAAATCAAGATGATGACAAAAC 665
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 719 ATGTGGAGCTCACACTGACTATGGCTTGTTGACACTTATAAATCAAGATGATGATAAAAC 778
Query 666 TGCTCTTCAGGTGAGAGACTTGGCCGGCGATTGGATACCAGTTATTCCGATCCCTGGATC 725
|||||||||||||| | || ||| ||| ||||||||||||| ||||||||||||||||||
Sbjct 779 TGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCTATTCCGATCCCTGGATC 838
Query 726 ATTTGTCTGCAACATCGGTGACATGCTAAAGATTCTTTCTAACGGAGTTTACGAATCCAC 785
||| |||||||||||||||||||| ||| ||| || || |||||||||||| |||||||
Sbjct 839 GTTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAACGGAGTTTACCAATCCAC 898
Query 786 ACTTCATAGAGTGATCAATAACTCTCCCCGATACCGTGTTTGCGTCGGATTCTTTTACGA 845
||| |||| ||| ||||| |||||||| |||||||||||| || | |||||| |||||
Sbjct 899 ACTACATAAAGTAATCAACAACTCTCCTAAATACCGTGTTTGTGTTGCATTCTTCTACGA 958
Query 846 GACGAACTTCGACGCAGCGGTGGAGCCGTTGGATATCTTCAAAGAGAAGTACCCAGGAAA 905
||| |||||||| || | ||||||||| |||||||||||||||||||||||||| ||||
Sbjct 959 GACTAACTTCGAGGCGGAGGTGGAGCCACTGGATATCTTCAAAGAGAAGTACCCAAGAAA 1018
Query 906 AGGAACATCCCAAGTTTTCAAAAGAGTTGTCTATGGGGAGCATCTGGTTCACAAACTCCA 965
|| |||||| |||||| |||||||||||||||||| |||||||| || ||||| |||
Sbjct 1019 AGAAACATCTCAAGTTGCCAAAAGAGTTGTCTATGGACAGCATCTGATTAACAAAGTCCT 1078
Query 966 GACCACTTTT-CAAAATTTAGTGGAACACAGTTAA 999
||| || ||| |||| |||||||||| ||||||||
Sbjct 1079 GACTACCTTTGCAAA-TTTAGTGGAAAACAGTTAA 1112
> Ahg485319 jgi|Araly1|485319|fgenesh2_kg.5__1311__AT3G49620.1
Length=1149
Score = 1223 bits (662), Expect = 0.0
Identities = 886/995 (89%), Gaps = 12/995 (1%)
Strand=Plus/Plus
Query 11 ACTTCAAATCCCTATTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAATGTGATGATG 70
|||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 124 ACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTACTGGCCAAATGTGATGATT 183
Query 71 CCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGTGGGAAAGCTGGACAGGGCCTGTC 130
| ||||||| |||||||||| || ||||| ||||| ||| || |||||||| ||||
Sbjct 184 TCGACATGGCTAAGGATGCCGGGGTTGCGGAAGTTGTCAAAAAACTAGACAGGGCATGTC 243
Query 131 GGGACG-CAGGATTCTTCTACGTAATTGGTCATGGAATATCGGAGGATTTTATAAGGAAG 189
|||||| | |||||||||||||| ||||||||||||||||||| ||| |||||| ||||
Sbjct 244 GGGACGTC-GGATTCTTCTACGTGGTTGGTCATGGAATATCGGATGATCTTATAAAGAAG 302
Query 190 GTGAGAGTGATGTCGCATCAATTCTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAG 249
||||||| | || |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 303 GTGAGAGAGGTGACGCATCAATTTTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAG 362
Query 250 ATTACTCCAGCTGCTGGATACAGAGGATATCAGAGAATCGGACTAAACTTAACGAA-TGG 308
||||||||||||| ||| |||||||||||||||||||| ||| |||| || || || |||
Sbjct 363 ATTACTCCAGCTGGTGGTTACAGAGGATATCAGAGAATTGGAGTAAATTTTAC-AAGTGG 421
Query 309 GAAACAAGATATGCACGAAGCCATTGATTGTTACAAAGAGTTTAAGCAAGGGAAGCATGG 368
||||||||||||||||||||||||||||||||||| |||||| |||||||||| | ||||
Sbjct 422 GAAACAAGATATGCACGAAGCCATTGATTGTTACAGAGAGTTCAAGCAAGGGAGGTATGG 481
Query 369 GGACATTGGAAAGGT-TATGGAAGGGGCAAACCAGTGGCCAGAGAATCCTCAAGAATACA 427
||||||||||||||| | |||||||| ||||||| ||||||| |||||||||||| ||||
Sbjct 482 GGACATTGGAAAGGTCT-TGGAAGGGTCAAACCATTGGCCAGGGAATCCTCAAGAGTACA 540
Query 428 AAGAGTTGATGGAGGAGTATATTAAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGG 487
|||| |||||||||||||| |||||||| |||| ||||||||||||||||||||||||||
Sbjct 541 AAGATTTGATGGAGGAGTACATTAAGCTATGCACAGATCTTTCTAGAAATATCTTAAGGG 600
Query 488 GAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAAGATGCTTA-CAGAT 546
||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||
Sbjct 601 GAATCTCCTTAGCCCTTGGTGGATCACCTTATGAGTTCGAGGGAAAGATGCTTAGC-GAC 659
Query 547 CCGTTTTGGATAATGCGTATTC-TTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGG 605
|| |||||| |||||||||| | |||||||||||||||||||||||||||||||||| ||
Sbjct 660 CCTTTTTGGGTAATGCGTAT-CATTGGTTATCCAGGTGTAAACCAAGAAAATGTTATTGG 718
Query 606 ATGTGGAGCTCACACTGACTATGGCTTGTTGTCACTTATAAATCAAGATGATGACAAAAC 665
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 719 ATGTGGAGCTCACACTGACTATGGCTTGTTGACACTTATAAATCAAGATGATGATAAAAC 778
Query 666 TGCTCTTCAGGTGAGAGACTTGGCCGGCGATTGGATACCAGTTATTCCGATCCCTGGATC 725
|||||||||||||| | || ||| ||| ||||||||||||| ||||||||||||||||||
Sbjct 779 TGCTCTTCAGGTGAAAAACGTGGACGGTGATTGGATACCAGCTATTCCGATCCCTGGATC 838
Query 726 ATTTGTCTGCAACATCGGTGACATGCTAAAGATTCTTTCTAACGGAGTTTACGAATCCAC 785
||| |||||||||||||||||||| ||| ||| || || |||||||||||| |||||||
Sbjct 839 GTTTATCTGCAACATCGGTGACATGTTAACGATACTATCAAACGGAGTTTACCAATCCAC 898
Query 786 ACTTCATAGAGTGATCAATAACTCTCCCCGATACCGTGTTTGCGTCGGATTCTTTTACGA 845
||| |||| ||| ||||| |||||||| |||||||||||| || | |||||| |||||
Sbjct 899 ACTACATAAAGTAATCAACAACTCTCCTAAATACCGTGTTTGTGTTGCATTCTTCTACGA 958
Query 846 GACGAACTTCGACGCAGCGGTGGAGCCGTTGGATATCTTCAAAGAGAAGTACCCAGGAAA 905
||| |||||||| || | ||||||||| |||||||||||||||||||||||||| ||||
Sbjct 959 GACTAACTTCGAGGCGGAGGTGGAGCCACTGGATATCTTCAAAGAGAAGTACCCAAGAAA 1018
Query 906 AGGAACATCCCAAGTTTTCAAAAGAGTTGTCTATGGGGAGCATCTGGTTCACAAACTCCA 965
|| |||||| |||||| |||||||||||||||||| |||||||| || ||||| |||
Sbjct 1019 AGAAACATCTCAAGTTGCCAAAAGAGTTGTCTATGGACAGCATCTGATTAACAAAGTCCT 1078
Query 966 GACCACTTTT-CAAAATTTAGTGGAACACAGTTAA 999
||| || ||| |||| |||||||||| ||||||||
Sbjct 1079 GACTACCTTTGCAAA-TTTAGTGGAAAACAGTTAA 1112
> Ahg485377 jgi|Araly1|485377|fgenesh2_kg.5__1369__AT3G50210.3
Length=1037
Score = 872 bits (472), Expect = 0.0
Identities = 833/1003 (83%), Gaps = 42/1003 (4%)
Strand=Plus/Plus
Query 1 ATGGCGACAAACTTCAAATCCCTATTACCAGTTATCGACATCA-GTCCTTTAGTGGTCAA 59
||||| || |||||| || || |||||||| |||||||| | |||| || ||| |||
Sbjct 11 ATGGCAACGGACTTCAGAT--CT-TTACCAGTCATCGACAT-ATCTCCTCTATTGGCCAA 66
Query 60 ATGTGATGATGCCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGT-GGGAAAGCTGG 118
||||||||| || ||||||| || |||||||||||||| || ||||| || || ||||
Sbjct 67 GTGTGATGATCCCGACATGGCTGATGATGCCGGCGTGGCCGATGTTGTCCGGCAA-CTGG 125
Query 119 ACAGGGCCTGTCGGGACGCAGGATTCTTCTACGTAATTGGTCATGGAATATCGGAGGA-T 177
| | || ||||||||||| |||||||||||||| || || |||||||| ||||| || |
Sbjct 126 ATAAAGCTTGTCGGGACGCCGGATTCTTCTACGTGATAGGCCATGGAATTTCGGA-GAGT 184
Query 178 TTTAT-AAGGAAGGTGAGAGTGATGTCGCATCAATTCTTCGAGCTTCCTTATGAAGAGAA 236
|||| || || || || | ||| | | | ||||| |||||||||||||||| ||
Sbjct 185 GTTATGAA-TAAAGTTAGGGAGATCACTCGTGGGTTCTTTAAGCTTCCTTATGAAGAAAA 243
Query 237 ACTTAAGATCAAGATTACTCCAGCTGCTGGATACAGAGGATATCAGAGAATCGGACTAAA 296
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 244 ACTTAAGATCAAGATGACTCCAGCTGCTGGATACAGAGGATATCAGAGAATTGGAGAAAA 303
Query 297 CT-TAACGAATGGGAA-ACAAGATATGCACGAAGCCATTGATTGTTACAAAGAGTTTAAG 354
| |||| || ||| | || |||||| |||||||||||||||||||||| |||| |||||
Sbjct 304 -TGTAACCAA-GGGTATACCAGATATTCACGAAGCCATTGATTGTTACAGAGAGATTAAG 361
Query 355 CAAGGGAAGCATGGGGACATTGG-AAAGGTTATGGAAGGGGCAAACCAGTGGCCAGAGAA 413
|| |||||| ||||||| || || |||| ||||||||||| |||||||||||||||||||
Sbjct 362 CAGGGGAAGTATGGGGATATAGGCAAAG-TTATGGAAGGGCCAAACCAGTGGCCAGAGAA 420
Query 414 TCCTCAAGAATACAAAGAGTTGATGGAGGAGTATATTAAGCTCTGCATAGATCTTTCTAG 473
||||||||| | ||||| ||||||||||||||||||||||| || | ||||||||||||
Sbjct 421 TCCTCAAGAGTTTAAAGAATTGATGGAGGAGTATATTAAGCTATGTACAGATCTTTCTAG 480
Query 474 AAATATCTTAAGGGGAATCTCATTAGCCCTTGGTGGATCACCTTATGAGTTTGAGGGAAA 533
||| ||||| || |||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 481 AAAGATCTTGAGAGGAATCTCCTTAGCTCTTACTGGATCACCTTATGAGTTTGAGGGAAA 540
Query 534 GATG-CTTACAGATCCGTTTTGGATAATGCGTATTCTTGGTTATCCAGGTG-T------- 584
|||| || || || |||||| | |||||| || ||||||||||||||| |
Sbjct 541 GATGGCTGGT-GACCCTTTTTGGGTGATGCGTCTTATTGGTTATCCAGGTGCTCCCTTCG 599
Query 585 -AAA---CCAA---GAAAATGTTATCGGATGTGGAGCTCACACTGACTATGGCTTGTTGT 637
||| |||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 600 CAAATGGCCAACCCGAAAATGATATCGGATGTGGAGCTCACACTGACTATGGCTTGTTAA 659
Query 638 CACTTATAAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAGACTTGGCCGGCGATT 697
| ||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 660 CTCTTGTAAATCAAGACGATGACAAAACTGCTCTTCAGGTGAGAAACTTGGGCGGCGATT 719
Query 698 GGATACCAGTTATTCCGATCCCTGGATCATTTGTCTGCAACATCGGTGACATGCTAAAGA 757
||||| ||| |||| ||||||||||| ||||| ||||||||||| |||||| ||||||
Sbjct 720 GGATATCAGCCGTTCCAATCCCTGGATCGTTTGTTTGCAACATCGGCGACATGTTAAAGA 779
Query 758 TTCTTTCTAACGGAGTTTACGAATCCACACTTCATAGAGTGATCAATAACTCTCCCCGAT 817
| ||||| |||||||| |||||||| ||||||||||||||||||||||||||||| | ||
Sbjct 780 TACTTTCAAACGGAGTATACGAATCGACACTTCATAGAGTGATCAATAACTCTCCTCTAT 839
Query 818 ACCGTGTTTGCGTCGGATTCTTTTACGAGACGAACTTCGACGCAGCGGTGGAGCCGTTGG 877
||||||| || |||| |||||| || ||||| || |||||||| | |||||||| ||||
Sbjct 840 ACCGTGTCTGTGTCGCATTCTTCTATGAGACTAATTTCGACGCGGTAGTGGAGCCATTGG 899
Query 878 ATATCT-TCAAAGAGAAGTACCC---AGGAAAAGGAACATCCCAAGTTTTCAAAAGAGTT 933
|||| | | ||| |||||||||| ||| | |||| |||||||||||||||||| | |
Sbjct 900 ATATATGT-AAACAGAAGTACCCTGCAGGGAGAGGAGGATCCCAAGTTTTCAAAAGGGCT 958
Query 934 GTCTATGGGGAGCATCTGGTTCAC-AAACTCCAGACCA-CTTT 974
||||| || |||||||| ||| | ||| ||||||||| ||||
Sbjct 959 GTCTACGGAGAGCATCTCGTT-AGTAAAGTCCAGACCAACTTT 1000
> Ahg949369 jgi|Araly1|949369|scaffold_801256.1
Length=213
Score = 204 bits (110), Expect = 1e-51
Identities = 135/147 (92%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 1 ATGGCGACAAACTTCAAATCCCTATTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAA 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 23 ATGGCGACAAACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAA 82
Query 61 TGTGATGATGCCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGTG-GGAAAGCTGGA 119
||||||||| | |||||||| |||||||||| |||||| |||||||| ||||| |||||
Sbjct 83 TGTGATGATTCGAACATGGCCGAGGATGCCGACGTGGCAAAGGTTGTGAGGAAA-CTGGA 141
Query 120 CAGGGCCTGTCGGGACGCAGGATTCTT 146
|| |||||||||||| || ||||||||
Sbjct 142 CAAGGCCTGTCGGGATGCCGGATTCTT 168
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 37131721158
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5