BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G49730.1
Length=1917
Score E
Sequences producing significant alignments: (Bits) Value
Ahg323555 jgi|Araly1|323555|fgenesh1_pm.C_scaffold_5001099 2889 0.0
Ahg496818 jgi|Araly1|496818|fgenesh2_kg.8__2634__AT5G65820.1 1461 0.0
> Ahg323555 jgi|Araly1|323555|fgenesh1_pm.C_scaffold_5001099
Length=3567
Score = 2889 bits (1564), Expect = 0.0
Identities = 1794/1904 (94%), Gaps = 20/1904 (1%)
Strand=Plus/Plus
Query 1 ATGCGTAGATTCTCTACCATTGTTGA---TCTTCTCATCAGCAAAAAACCA---TCT--- 51
||||||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct 1 ATGCGTAGATTCTCTACCATTGTCGATCTTCTTCTCATCAGCAAAAAACCATCTTCTCAA 60
Query 52 TCTCAAGCAAATTCTAGAATTGATCTCATTTGTAAAAGGTTCCATATTTCAAGAGTTCTC 111
||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||
Sbjct 61 TCTCAAGCAAATTCTCGAATTGATCTCATTTGTAAAAGGTTTCACATTTCAAGAGTTCTC 120
Query 112 AATAACGATTTCGTAGAATCAACAGAGAGAAAGAATGGGGTTGGTTTAGTTTGTCCAGAG 171
|||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 121 AATAACGATTTCGTGGAATCAACAGAGAGAAAGAATGGGCTTGGTTTAGTTTTTCCAGAG 180
Query 172 AAGCATGAAGATGAATTCGCCGGTGAAGTCGAGAAGATTTACAGAATTTTGCGGAATCAC 231
|||||||| ||||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct 181 AAGCATGAGGATGAATTCGCCGGTGACGTTGAGAAGATATACAGAATTTTGCGGAATCAC 240
Query 232 CATTCTAGAGTTCCAAAATTGGAGCTTGCTCTTAACGAATCAGGTATTGATCTGCGACCC 291
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 241 CATTCTAGGGTTCCGAAATTGGAGCTTGCTCTTAACGAATCAGGTATTGATCTACGACCC 300
Query 292 GGGTTGATCATACGAGTGTTGAGTCGTTGTGGCGATGCTGGGAATCTAGGTTATAGATTC 351
||||| ||| |||||||||||||||| ||||| |||||||||||| |||||||||||||
Sbjct 301 GGGTTAATCGTACGAGTGTTGAGTCGGTGTGGAGATGCTGGGAATTTAGGTTATAGATTT 360
Query 352 TTTCTGTGGGCAACGAAGCAACCTGGTTATTTTCATAGCTATGAAGTGTGTAAATCAATG 411
||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 361 TTTCTATGGGCAACGAAGCAACCTGGGTATTGTCATAGCTATGAAGTGTGTAAATCAATG 420
Query 412 GTGATGATTCTTAGTAAAATGCGACAATTTGGAGCTGTTTGGGGTTTAATTGAAGAGATG 471
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 GTGATGATTCTTAGTAAAATGCGGCAATTTGGAGCTGTTTGGGGTTTAATTGAAGAGATG 480
Query 472 AGGAA-GACGAATCCGGAGTTGATTGAGCCGGAGTTGTTCGTTGTATTGATGCGGAGGTT 530
||||| || |||||| |||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 481 AGGAAGGA-GAATCCAGAGTTGATTGAGCCAGAGTTGTTCGTTGTATTGATACGGAGGTT 539
Query 531 TGCTTCTGCTAACATGGTGAAGAAAGCAGTTGAGGTGCTCGACGAAATGCCTAAGTATGG 590
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TGCTTCTGCTAATATGGTGAAGAAAGCAGTTGAGGTGCTCGACGAAATGCCTAAGTATGG 599
Query 591 GTTAGAGCCTGACGAGTATGTTTTTGGTTGTTTGTTAGATGCTTTGTGTAAGAACGGTAG 650
|| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 600 TTTTGAGCCTGACGAGTATGTTTTTGGATGTTTGTTAGATGCTTTGTGTAAGAACGGTAG 659
Query 651 TGTTAAGGAGGCTTCAAAGGTTTTTGAGGATATGAGAGAGAAGTTTCCTCCGAATTTGCG 710
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 660 TGTTAAGGATGCTTCAAAGGTTTTTGAGGATATGAGAGAGAAGTTTCCTCCGAATTTACG 719
Query 711 GTATTTTACTTCGTTGTTGTATGGTTGGTGTAGGGAAGGGAAGTTGATGGAAGCTAAAGA 770
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 720 GTATTTCACTTCGTTGTTGTATGGTTGGTGTAGGGAAGGGAAGTTGATGGAAGCTAAGGA 779
Query 771 AGTTTTGGTTCAGATGAAGGAAGCTGGGCTTGAGCCTGACATTGTGGTTTTCACTAACTT 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 AGTTTTGGTTCAGATGAAGGAAGCTGGGCTTGAGCCTGACATTGTGGTTTTCACTAACTT 839
Query 831 ACTTAGTGGATATGCTCATGCTGGGAAAATGGCGGATGCGTATGATCTTATGAATGATAT 890
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 840 GCTTAGTGGATATGCTCATGCTGGGAAAATGGCGGATGCTTATGATCTTATGAATGATAT 899
Query 891 GAGAAAGAGAGGGTTTGAGCCGAATGTGAATTGTTACACGGTTTTGATCCAGGCGTTGTG 950
|||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 900 GAGAAAAAGAGGGTATGAGCCGAATGCGAATTGTTACACGGTTTTGATCCAGGCGTTGTG 959
Query 951 TAGGACGGAGAAGAGAATGGATGAGGCGATGCGGGTTTTTGTTGAGATGGAGAGGTATGG 1010
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 960 TAGGACGGAGAAGAGAATGGATGAGGCGATGAGGGTTTTTGTTGAGATGGAAAGGTATGG 1019
Query 1011 ATGTGAGGCTGATATTGTGACTTATACCGCGTTGATAAGTGGGTTTTGTAAATGGGGAAT 1070
|||||||||||||||||||||||| |||||| ||||||| |||||||| || ||||||||
Sbjct 1020 ATGTGAGGCTGATATTGTGACTTACACCGCGCTGATAAGCGGGTTTTGCAAGTGGGGAAT 1079
Query 1071 GATTGATAAAGGTTATAGTGTTTTAGATGATATGAGAAAGAAAGGAGTCATGCCGTCGCA 1130
||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1080 GATCGATAAGGGTTATAGTGTTTTAGATGATATGAGAAAGAAAGGAGTTATACCGTCGCA 1139
Query 1131 AGTAACATATATGCAGATAATGGTGGCTCATGAGAAGAAAGAACAATTTGAAGAGTGTTT 1190
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 AGTATCATATATGCAGATAATGGTGGCTCATGAGAAGAAAGAACAATTTGAAGAGTGTTT 1199
Query 1191 GGAGTTGATTGAGAAGATGAAGCGAAGAGGTTGTCATCCTGATCTTCTCATTTACAATGT 1250
||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||
Sbjct 1200 GGAGTTGATTGAGAAGATGAAGCAAATAGGTTGTCATCCCGATCTTCTCATTTACAATGT 1259
Query 1251 AGTGATAAGATTGGCTTGTAAGTT-AGGGGAAGTGAAAGAAGCTGTTCGGTTATGGAACG 1309
|||||| |||||||||||||| || |||| ||||||||||||| ||||||||||||||||
Sbjct 1260 AGTGATCAGATTGGCTTGTAACTTTAGGG-AAGTGAAAGAAGCAGTTCGGTTATGGAACG 1318
Query 1310 AAATGGAAGCTAATGGGCTAAGCCCTGGAGTTGATACGTTTGTTATTATGATCAACGGAT 1369
|||||||||||||||| |||| ||||||||||| | |||||||||||||||||||||||
Sbjct 1319 AAATGGAAGCTAATGGTTTAAGTCCTGGAGTTGACATGTTTGTTATTATGATCAACGGAT 1378
Query 1370 TTACAAGCCAAGGTT-TCCTAATCGAAGCCTGTAATCACTTCAAAGAAATGGTAAGCCGA 1428
|||| |||||||||| || ||||||||||||| |||||||||||||||||||||||||||
Sbjct 1379 TTACTAGCCAAGGTTATC-TAATCGAAGCCTGCAATCACTTCAAAGAAATGGTAAGCCGA 1437
Query 1429 GGAATATTCTCTGCGCCTCAATATGGAACGCTGAAGTCATTGCTTAATAAC-CTTGTTAG 1487
||| |||||||||||||||||||||||||||||||||||||||| |||| | ||| | ||
Sbjct 1438 GGATTATTCTCTGCGCCTCAATATGGAACGCTGAAGTCATTGCTAAATA-CTCTTCTAAG 1496
Query 1488 AGATGATAAGCTCGAAATGGCGAAAGATGTATGGAGTTGCATATCCAACAAAACCTCTTC 1547
|||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 1497 AGATGATAAGCTTGAAATGGCGAAAGATGTATGGAGTTGCTTATCAAACAAAACCTCTTC 1556
Query 1548 CTGTGAGCTGAATGTATCAGCTTGGACAATATGGATCCATGCTTTGTACGCAAAAGGTCA 1607
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1557 TTGTGAGCTGAATGTATCAGCTTGGACAATATGGATCCATGCTTTGTTCGCAAAAGGTCA 1616
Query 1608 CGTGAAGGAAGCGTGTTCGTATTGTCTTGATATGATGGAGATGGATTTGATGCCGCAACC 1667
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1617 CGTGAAGGAAGCATGTTCGTATTGTCTTGATATGATGGAGATGGACTTGATGCCGCAACC 1676
Query 1668 TAATACTTATGCGAAACTTATGAAAGGATTGAATAAACTGTATAATAGGACGATCGCTGC 1727
||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 1677 TAATACTTACGCGAAACTTATGAAAGGATTGCATAAACTGTATAACAGGACGATCGCTGC 1736
Query 1728 AGAGATTACAGAGAAGGTGGTGAAGATGGCAAGTGAGAGAGAGATGAGTTTTAAGATGTA 1787
||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct 1737 AGAGATTACAGAGAAGGTGATGAAGATGGCGAGTGAGAGAGAGATGAGTTTTAAAATGTA 1796
Query 1788 TAAGAAGAAAGGTGAGGAGGATTTGATTGAGAAAGCTAAACCTAAAGGGAATAA-A--GA 1844
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 1797 TAAGAAGAGAGGTGAGGAGGATTTGATTGAGAAAGCTAAACCTAAAGGTAATAATAAAGA 1856
Query 1845 AGGAAAGAAGAAAGGGACAGATCATCAAAGGTATAAGGGAAGAG 1888
||| ||||||||||| ||||||||||| ||| |||| ||| |||
Sbjct 1857 AGGGAAGAAGAAAGGAACAGATCATCATAGGCATAAAGGAGGAG 1900
> Ahg496818 jgi|Araly1|496818|fgenesh2_kg.8__2634__AT5G65820.1
Length=1917
Score = 1461 bits (791), Expect = 0.0
Identities = 1416/1710 (83%), Gaps = 74/1710 (4%)
Strand=Plus/Plus
Query 181 GATGAATTCGCCG-GTGAAGTCG-AGAAGATTTACAGAATTTTGCGG-AATCACCATTCT 237
|||||||||| || |||| |||| | ||| ||||| ||||||||| ||| |||||
Sbjct 232 GATGAATTCG-CGAGTGATGTCGAAAAAG-CCTACAGGATTTTGCGGAAAT-TTCATTCC 288
Query 238 AGAGTTCCAAAATTGGAGCTTGCTCTTAACGAATCAGGTATTGATCTGCGACCCGGGTTG 297
|| ||||| || ||||| || || ||||||||||| ||| |||| || |||||||||||
Sbjct 289 AGGGTTCCGAAGTTGGAACTCGCGCTTAACGAATCCGGTGTTGAACTCCGACCCGGGTTA 348
Query 298 ATC-ATACGAGTGT-TGAGTCGTTGTGGCGATGCTGGGAATCTAGGTTATAGATTCTTTC 355
||| | ||| || | ||| ||||||||| |||||||||||||||||||| |||||| |||
Sbjct 349 ATCGA-ACGGGT-TCTGAATCGTTGTGGGGATGCTGGGAATCTAGGTTACAGATTC-TTC 405
Query 356 -TGTGGGCAACGAAGCAACCTGGTTATTTTCATAGCTAT-GAAGTGTGTAAATCAATGGT 413
| ||||| ||||||||||| |||||| ||| ||| || ||||||| ||||||||||||
Sbjct 406 GTCTGGGCGGCGAAGCAACCTCGTTATTGTCACAGC-ATCGAAGTGTATAAATCAATGGT 464
Query 414 GATGATTCTTAGTAAAATGCGACAATTTGGAGCTGTTTGGGGTTTAATTGAAGAGATGAG 473
|| ||||| ||||| ||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 465 GAAAATTCTAAGTAAGATGCGTCAATTTGGAGCTGTTTGGGGTTTAATCGAAGAAATGAG 524
Query 474 GAA-GACGAATCCGGAGTTGATTGAGCCGGAGTTGTTCGTTGTATTGATGCGGAGGTTTG 532
||| || ||||||| |||||||||| ||||| ||||| ||||| ||| | | ||||||||
Sbjct 525 GAAGGA-GAATCCGCAGTTGATTGAACCGGAATTGTTTGTTGTTTTGGTTCAGAGGTTTG 583
Query 533 CTTCTGCTAACATGGTGAAGAAAG-CAGTTGAGGTGCTCGACGAAATGCCTAAGTATGGG 591
| ||||| | ||||||||||||| || ||||||||||||||||||||||||||| |||
Sbjct 584 CCTCTGCGGATATGGTGAAGAAAGCCA-TTGAGGTGCTCGACGAAATGCCTAAGTTTGGT 642
Query 592 TTAGAGCCTGACGAGTATGTTTTTGGTTGTTTGTTAGATGCTTTGTGTAAGAACGGTAGT 651
|||||||| ||||||||||| || || |||||| ||||||| ||||||||| |||||||
Sbjct 643 TTAGAGCCAGACGAGTATGTATTCGGGTGTTTGCTAGATGCGTTGTGTAAGCACGGTAGC 702
Query 652 GTTAAGGAGGCTTCAAAGGTTTTTGAGGATATGAGAGAGAAGTTTCCTCCGAATTTGCGG 711
|||||||| ||| ||||| |||| |||||||||||| | |||||| ||||||| |
Sbjct 703 GTTAAGGATGCTGCAAAGCTTTTCGAGGATATGAGATTGCGGTTTCCGGTGAATTTGAGA 762
Query 712 TATTTTACTTCGTTGTTGTATGGTTGGTGTAGGGAAGGGAAGTTGATGGAAGCTAAAGAA 771
||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| |
Sbjct 763 TATTTTACTTCGTTGTTGTATGGTTGGTGCAGGGAAGGGAAGATGATGGAGGCTAAATAT 822
Query 772 GTTTTGGTTCAGATGAAGGAAGCTGGGCTTGAGCCTGACATTGTGGTTTTCACTAACTTA 831
||||||||||||||||||||||||||| ||||||| || |||| | || ||| |||||
Sbjct 823 GTTTTGGTTCAGATGAAGGAAGCTGGGTTTGAGCCAGATGTTGTTGATTACACCAACTT- 881
Query 832 CTT-AGTGGATATGCTCATGCTGGGAAAATGGCGGATGCGTATGATCTTATGAATGATAT 890
|| ||||| |||||| ||||||| |||||||| ||||| ||||||||| |||| |||||
Sbjct 882 GTTAAGTGGGTATGCTAATGCTGGTAAAATGGCTGATGCTTATGATCTTTTGAAAGATAT 941
Query 891 GAGAAAG-AGAGGGTTTGAGCCGAATGTGAA-TTGTTACACGGTTTTGATCCAGGCGTTG 948
||| ||| ||||||||||| ||||||| || ||| |||||||||||||| || || |||
Sbjct 942 GAG-AAGAAGAGGGTTTGAACCGAATG-CAACTTGCTACACGGTTTTGATTCAAGCATTG 999
Query 949 TGTAGGACGG-AGAAGAGAATGGATGAGGCGATGCGGGTTTTTGTTGAGATGGAGAGGTA 1007
|||| | || || | |||||||| ||||| ||| ||| ||||||||||||||||||||
Sbjct 1000 TGTA--A-GGTAG-ATAGAATGGAGGAGGCAATGAAGGTATTTGTTGAGATGGAGAGGTA 1055
Query 1008 TGGATGTGAGGCTGATATTGTGACTTATACCGCGTTGATAAGTGGGTTTTGTAAATGGGG 1067
|| ||| ||||||||| |||||||||| || || ||| | ||||||||||| ||||||||
Sbjct 1056 TGAATGCGAGGCTGATGTTGTGACTTACACTGCATTGGTTAGTGGGTTTTGCAAATGGGG 1115
Query 1068 AATGATTGATAAAG-GTTATAGT-GTTTTAGATGATATGAGAAAGAAAGGAG-TCATGCC 1124
|| ||| ||| ||| ||||| | |||||||| ||||||| ||| ||||| | |||||||
Sbjct 1116 AAAGATCGAT-AAGTGTTAT-CTAGTTTTAGACGATATGATAAA-AAAGGGGCTCATGCC 1172
Query 1125 GTCGCAAGTAACATATATGCAGATAATGGTGGCTCATGAGAAGAAA-GAACAATTTGAAG 1183
|| ||| || |||||||| || |||| ||||||||||| ||| ||| || ||| ||
Sbjct 1173 TTCTCAACCCACCTATATGCATATCATGGCAGCTCATGAGAA-AAAGGAAAAACTTGTAG 1231
Query 1184 AGTGTTTGGAGTTGATTGAGAAGATGAAGC-GA-AGAGGTTGTCATCCTGATCTTCTCAT 1241
||||||||||| |||| ||||||||||||| || ||| | | |||||| ||| || |||
Sbjct 1232 AGTGTTTGGAGCTGATGGAGAAGATGAAGCAGATAGA-G-TATCATCCCGATATTGGCAT 1289
Query 1242 TTACAATGTAGTGATAAGATTGGCTTGTAAGTTAGGG-GAAGTGAAA-GAAGCTGTTCGG 1299
||||||||| || || |||||||||||||| || ||| ||||| ||| ||||||||| |
Sbjct 1290 TTACAATGTCGTCATCAGATTGGCTTGTAAATT-GGGAGAAGT-AAAGGAAGCTGTTAGA 1347
Query 1300 TTATGGAACGAAATGGAAGCTAATGGGCTAAGCCCTGGAGTTGATACGTTTGTTATTATG 1359
||||||||||||||||||| || || | || ||||||| |||||||||||||||||
Sbjct 1348 TTATGGAACGAAATGGAAGGGAACGGTTTGAGTCCTGGAGCAGATACGTTTGTTATTATT 1407
Query 1360 ATCAACGGATTTACAAGCCAAGGTT-TCCTAATCGAAGCCTGTAATCACTTCAAAGAAAT 1418
||||| ||||| ||||||||||||| | || ||||||||||| ||||||| ||||||||
Sbjct 1408 ATCAATGGATTAACAAGCCAAGGTTGT-TTACTCGAAGCCTGTGATCACTTTAAAGAAAT 1466
Query 1419 GGTAAGC-CGAGGAATATTCTCTGCGCCTCAATATGGAACGCTGAAGTCATTGCTTAATA 1477
||| ||| |||||| | ||||| | |||||||| ||||| ||||||| |||||| ||||
Sbjct 1467 GGT-AGCTCGAGGATTGTTCTCCGTTCCTCAATACGGAACTCTGAAGTTATTGCTAAATA 1525
Query 1478 ACCTTGTT-AGAGATGATAAGCTCGAAATGGCGAAAGATGTATGGAGTTGCATATC-CAA 1535
|||| || | ||| | |||||||||||||| |||||||| ||||||||| ||| |||
Sbjct 1526 CCCTT-TTAAAAGACAAGAAGCTCGAAATGGCAAAAGATGTTTGGAGTTGC--ATCACAA 1582
Query 1536 -CAAAACCTCTTCCTGTGAGCTGAATGTATCAGCTTGGACAATATGGATCCATGCTTTGT 1594
||| ||| | || ||||||| ||||||| | |||||||||||||||||||| ||||
Sbjct 1583 GTAAAGGCTC-T--TGCGAGCTGAGTGTATCATCGTGGACAATATGGATCCATGCCTTGT 1639
Query 1595 ACGCAAAAGGTCACGTGAAGGAAGCGTGTTCGTATTGTCTTGATATGATGGAGATGGATT 1654
| |||||||| | | ||||| || ||||| ||||||||||| ||||| |||||||| |
Sbjct 1640 TCTCAAAAGGTTATGAAAAGGAGGCTTGTTCTTATTGTCTTGAAATGATAGAGATGGAGT 1699
Query 1655 TGATGCCGCAACCTA-ATAC-TTATGCGAAACTTATGAAAGGATTGAATAAACTGTATAA 1712
| ||||| ||||| | | || || ||| |||||||| || |||||||| ||| ||||| |
Sbjct 1700 TCATGCCACAACC-AGACACATT-TGCTAAACTTATCAAGGGATTGAAGAAATTGTATCA 1757
Query 1713 TAGGACG-A-TCGCTGCAGAGATTACAGAGAAGGTG-GTGAAGATGGCAAG-TGAGAGAG 1768
|| || | | |||||| ||||||||||||||| ||| | ||| ||||| || ||||||||
Sbjct 1758 TA-GA-GAATTCGCTGTAGAGATTACAGAGAAAGTGAG-GAATATGGC-AGCTGAGAGAG 1813
Query 1769 AGATGAGTTTTAAGATGTATAAGAAGAA-AGGTGAGGAGGATTTGATTGAGAAAGCTAAA 1827
|||||||||||||||||||||||| ||| ||| | | | ||||||| |||||||||||||
Sbjct 1814 AGATGAGTTTTAAGATGTATAAGA-GAAGAGGAGTGCAAGATTTGACTGAGAAAGCTAAA 1872
Query 1828 CCTAAAGG-GAATAAAGAAGGAAAGAAGAA 1856
||||| || || |||||| ||||||||
Sbjct 1873 TCTAAACAAGA-TAGAGAAGGGAAGAAGAA 1901
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72028653295
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5