BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G50230.1 Length=1983 Score E Sequences producing significant alignments: (Bits) Value Ahg485378 jgi|Araly1|485378|fgenesh2_kg.5__1370__AT3G50230.1 2743 0.0 Ahg496879 jgi|Araly1|496879|fgenesh2_kg.8__2695__AT5G67200.1 592 4e-168 > Ahg485378 jgi|Araly1|485378|fgenesh2_kg.5__1370__AT3G50230.1 Length=1959 Score = 2743 bits (1485), Expect = 0.0 Identities = 1820/1978 (92%), Gaps = 38/1978 (2%) Strand=Plus/Plus Query 20 actc-tcttct-cttc-cttctcctcctcctccgtatctccaccgc---ctctctccCGG 73 |||| |||||| | || |||||| ||||||||||||||||| |||| ||| ||||| | Sbjct 6 ACTCTTCTTCTAC-TCTCTTCTCTTCCTCCTCCGTATCTCCGCCGCAAACTCCCTCCCAG 64 Query 74 CGACGAACTACTTCGACTCCTTCTTACCATCCGACGCCGTCGCACTTCTCTCCTTCAAAT 133 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 65 CGACGAACTACTTCGACTCCTTCTTACCTTCCGACGCCGTCGCACTTCTCTCCTTCAAAT 124 Query 134 CCACCGCTGATCTCGACAACAAGCTTCTATACTCTCTCACCGAGCCTTACGACTACTGTC 193 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 125 CCACCGCTGATCTCGACAACAAGCTTCTATACTCTCTCACCGAGCCTTACGATTACTGTC 184 Query 194 AATGGCGCGGCGTCGATTGCTCTCAAGATCGCGTCGTTCGTCTTATCCTCGACGGTGTTG 253 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 185 AATGGCGCGGCGTCGACTGCTCTCAAGATCGCGTCGTTCGTCTTATCCTCGACGGCGTTG 244 Query 254 GTCTCCGGGGAAGTTTCTCACCGGAGACTCTTAGTCGTCTTGATCAGCTTCGTGTTCTTA 313 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 GTCTCCGAGGACGTTTCTCACCGGAGACTCTTAGTCGTCTTGATCAGCTTCGTGTTCTTA 304 Query 314 GCCTTGAGAATAACTCAATCTCGGGTTCGATTCCTGATCTATCTCCTCTCGTCAATCTCA 373 |||||| ||||||||||||||| |||||| ||||||||||||||||| | |||||||| Sbjct 305 GCCTTGTGAATAACTCAATCTCTGGTTCGGTTCCTGATCTATCTCCTTTAACCAATCTCA 364 Query 374 AAACCCTAACCCTAAGCAAGAATGGTTTCTCCGGTACTCTTTCTTCTTCAATTCTCTCTC 433 |||||||||||||||||||||| |||||||||||||||| ||| ||| ||||| |||| Sbjct 365 AAACCCTAACCCTAAGCAAGAACCGTTTCTCCGGTACTCTCTCTGGTTCGATTCTTTCTC 424 Query 434 TTCGTCGGTTA-ACAGAACTTGATCTATCGTTTAACAACTTCTCCGGTGAGATTCCGTCG 492 |||| |||||| | ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 425 TTCGCCGGTTAGTC-GAACTTGATCTATCGTTTAACAACTTCGCCGGTGAGATTCCGTCG 483 Query 493 GGGATCAATGCTCTGAGTCGACTCAGTTCTTTAAATCTCGAGTTTAATCGACTT-AACGG 551 | ||||||||||||||||||||||| ||||||||||||||||||||||||| || | || Sbjct 484 GAGATCAATGCTCTGAGTCGACTCATTTCTTTAAATCTCGAGTTTAATCGA-TTCAGTGG 542 Query 552 AACTCTCCCGCCGTTAAATCTTTCTTCTCTGATTTCATTTAACGTTTCCAGTAACAACCT 611 ||||||||||||| |||| ||||||| ||| || |||||||||||| ||||||| || Sbjct 543 TCCTCTCCCGCCGTTGAATCATTCTTCTATGACGTCGTTTAACGTTTCCGGTAACAATCT 602 Query 612 CACCGGTTTAGTTCC-GTTAACAAAGACTCTGTTACGATTCAACGCGTCTTCGTTTTCGT 670 ||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 603 CACCGGTTTAGTTCCGGTT-ACAACGACTCTGTTACGATTCAACGCGTCTTCGTTTTCGT 661 Query 671 CAAACCCTGGACTCTGCGGTGAGATCATTAACCGATCTTGCGGTTTACATTCTTCTTCTC 730 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 662 CAAACCCTGGACTCTGCGGTGAGATCATTAACCGATCTTGCGGTTCACGTTCTTCTTCTC 721 Query 731 CGTTCTTTGGTTCACCTAAACCAAACACCACGTCATCAACATCTTCTGCTTCTTCGTCTG 790 | ||||| |||||| ||||||||||| ||||||||| || | ||||||||||| Sbjct 722 CATTCTTCGGTTCAACTAAACCAAACGCCACGTCAT---CA-----T-CTTCTTCGTCTC 772 Query 791 AAGCACCGGTTATTCAAAGTGAACAGAACGGTGAAGCAGCGATGATTGTTCCACCGGTGG 850 |||||||| ||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct 773 AAGCACCGATTAGTCAAAGCG---AGAACGGTGAAGCAGCGATGATTGTTCCACCGGTGG 829 Query 851 TTAAAAAGGTTAAAAACGGTTGGTTAGTTCTTGGTTTCACCATTGGTCTCGCTTCTTTGA 910 |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| Sbjct 830 TTAAAAAGGTTAAAAATGGTTGGTTAGTACTTGGTTTCACCATTGGTCTCGCTTCTTTGA 889 Query 911 TAGTTCTAGGTCTCTGCCTCGTCGTGTTCTCGTTGTTTATAAAAAACCGGAGAGAAGACT 970 |||| || ||||| || ||||| ||||||||||||||||| || ||||||||||| || Sbjct 890 TAGTCCTCGGTCTTTGTCTCGTAGTGTTCTCGTTGTTTATGAAGAACCGGAGAGACTACG 949 Query 971 ACGATGACGTGATAATTACGCAACCTAAGCGAGAAGAAGAAAACAAAGAAATCAAGATCC 1030 |||||||||||||||| ||||||||||| |||||||||| ||||||||||||||| |||| Sbjct 950 ACGATGACGTGATAATGACGCAACCTAAACGAGAAGAAGGAAACAAAGAAATCAAAATCC 1009 Query 1031 AATTTCAAACCACTGCGCCGTCGTCG-AAAAAGCGAATCCCAAGAAACGGAGATTTGATA 1089 |||| |||||||||| ||||||| || ||||| |||||| ||||||||||||||||||| Sbjct 1010 AATTCCAAACCACTGAGCCGTCGCCGCAAAAA-CGAATCTCAAGAAACGGAGATTTGATT 1068 Query 1090 TTCTGCGGCGAaggaggaggaggaggagAAGCAATGTACACAGTTGACCAGTTGATGAGA 1149 ||||||||| || |||||||||| ||| |||| ||| |||| |||||||||||| Sbjct 1069 TTCTGCGGC----GA--CGGAGGAGGAGTAGCTGTGTATACACTTGATCAGTTGATGAGA 1122 Query 1150 GCTTCAGCAGAGCTTTTAGGAAGAGGATCAGTAGGTACAACGTATAAAGCGGTGATGGTT 1209 ||||| || |||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1123 GCTTCTGCGGAGCTTTTTGGAAGAGGATCAGTAGGTACGACGTATAAAGCGGTGATGGTT 1182 Query 1210 AATCAAATGATCGTGACGGTGAAGAGATTTGCTCCGTCGAAAACAGCGATTACTAGTGAT 1269 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1183 AATCAACTGATTGTGACGGTGAAGAGATTTGCTCCGTCGAAAACAGCGATTACTAGTGAT 1242 Query 1270 TTAGAGTTTGAGAATCAGATGGAGATAGTTGGTGGACTTAAGCATCCGAATCTTGTTCCG 1329 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1243 TTAGCGTTTGAGAATCAGATGGAGATAGTTGGTGGACTTAAGCATCCGAATCTTGTTCCG 1302 Query 1330 GTTAAAGCTTATTTCCAGTCAAATGGAGAGAGACTTGTCATCTATGAGTACCAACCTAAT 1389 || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1303 GTAAAAGCTTATTTTCAGTCAAATGGAGAGAGACTTGTCATCTATGAGTACCAACCTAAT 1362 Query 1390 GGAAGTCTCTTCAATCTTATTCATGGTTCGAGAACATCAAAGGCAAAGCCATTACATTGG 1449 ||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| Sbjct 1363 GGAAGTCTCTTCAATCTTATTCATGGTTCAAGAACATCAAAAGCTAAGCCATTACATTGG 1422 Query 1450 ACATCATGTTTGAAGATAGCAGAAGATGTAGCTCAAGCATTACATTACATTCACCAATCA 1509 |||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct 1423 ACATCATGCTTGAAGATAGCAGAAGATGTGGCTCAAGCACTACATTATATTCACCAATCA 1482 Query 1510 TCAGCCAAATTCCATGGAAACCTTAAGTCCACTAACATCCTCCTTGGTCACGACTTTGAA 1569 |||| ||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1483 TCAGGAAAATTTCATGGAAACCTCAAGTCCACTAACATCCTCCTTGGTCACGACTTCGAA 1542 Query 1570 GCTTGTGTCACAGATTATTGTTTAAGTGTCTTAACAGACTCATCTGTTCCTCCC-AATGA 1628 ||||||||||||||||| ||| |||||||||||||||||||||| | ||||||| ||||| Sbjct 1543 GCTTGTGTCACAGATTACTGTCTAAGTGTCTTAACAGACTCATCAG-TCCTCCCTAATGA 1601 Query 1629 CCCGGACATCTCTTCCTATAAAGCACCAGAGATAAGGAAATCAACAGATA---GTCGTCC 1685 |||||||||||||||||| |||||||||||| |||||||||||| ||||| ||||||| Sbjct 1602 CCCGGACATCTCTTCCTACAAAGCACCAGAGGTAAGGAAATCAATAGATAGTCGTCGTCC 1661 Query 1686 CACGTCGAAATGCGATGTTTACTCGTTCGGGGTCTTCCTCTTAGAGCTATTGACCGGTAA 1745 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 1662 CACGTCCAAATGCGATGTGTACTCGTTCGGGGTCTTCCTCTTAGAGCTATTGACTGGTAA 1721 Query 1746 AACCGCTTCGAGGCAACCGATTATGGAGCCAAACGATATGTTGGATTGGGTAAGAGCAAT 1805 ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1722 AACAGCTTCAAGACAACCGATTATGGAGCCAAACGATATGTTGGATTGGGTAAGAGCAAT 1781 Query 1806 GAGGCAAGAAGAAGAAAGGTCAAAGGAAGAGAATGGGCTAGAGATGATGACTCAAACGGC 1865 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1782 GAGGCAAGAAGAGGAAAGGTCAAAGGAAGAGAATGGGCTAGAGATGATGACTCAAACGGC 1841 Query 1866 TTGTCTTTGCCGTGTAACATCGCCAGAGCAAAGGCCCACTATGAAAGAAGTGATCAAAAT 1925 ||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1842 TTGTCTTTGTCGTGCAACATCGCCAGAGCAAAGGCCGACTATGAAAGAAGTGATCAAAAT 1901 Query 1926 GATTCAAGAGATTAAGGGGAGTGTTGTGATGACTGAAGAGAACGAAAAATTCCTCTGA 1983 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 1902 GATTCAAGAGATTAAGGAGAGTGTTGTGATGACTGAAGAGAACGAAACTTTCCTCTGA 1959 > Ahg496879 jgi|Araly1|496879|fgenesh2_kg.8__2695__AT5G67200.1 Length=2172 Score = 592 bits (320), Expect = 4e-168 Identities = 697/874 (80%), Gaps = 45/874 (5%) Strand=Plus/Plus Query 1118 AAGCAATGTACACAGTTGACCAGTTGATGAGAGCTTCAGCAGAGCTT-TTAGGAAGAGGA 1176 ||| |||||||||| | || ||| | ||||||||||| || ||| || || ||||||||| Sbjct 1150 AAGGAATGTACACAATGGAGCAGCTAATGAGAGCTTCGGCGGAG-TTATTGGGAAGAGGA 1208 Query 1177 TCAGTAGGTACAACGTATAAAGCGGTGATGGTTAATCAAATGATCGTGACGGTGAAGAGA 1236 ||||| || | | |||||| ||||| | | |||||| | || ||||| ||||||||| Sbjct 1209 TCAGTGGGGATTATGTATAAGGCGGTTCTTGATAATCAGCTTATTGTGACAGTGAAGAGA 1268 Query 1237 TTTGCTC-CGTCGAAAACAGCGATTACTAGTGATTTAGAGTTTGAGAATCAGATGGAGAT 1295 | | | || | ||||| ||| | || ||||| || |||||||||||| |||||||| Sbjct 1269 CTAG-ACGCGGCTAAAACGGCGGTGACGAGTGAAGAAGCGTTTGAGAATCATATGGAGAT 1327 Query 1296 AGTTGGTGGACTTAAG-CATC-CGAATCTTGTTCCGGTTAAAGCTTA-TTTCCAGTCAAA 1352 |||||||||||| || || | | |||||||| || ||| |||||| ||| || ||||| Sbjct 1328 TGTTGGTGGACTT-AGACA-CACCAATCTTGTCCCCATTAGAGCTTACTTT-CAATCAAA 1384 Query 1353 TGGAGAGAGACTTGTCATCTATGAGTACCAACCTAATGGAAGTC-TCTTCAATCTTATTC 1411 ||||||||||| | |||||||| || || |||||||| || | | |||||||| |||| Sbjct 1385 CGGAGAGAGACTCATTATCTATGATTATCATCCTAATGGTAG-CTTATTCAATCTCATTC 1443 Query 1412 ATGGTTCGAGAACATCAAAG-GCAAAGCCATTACATTGGACATCATGTTTGAAGATAGCA 1470 | ||||| ||| | || ||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct 1444 ACGGTTCAAGATCTTC-AAGAGCAAAGCCATTACATTGGACATCATGTTTAAAGATTGCA 1502 Query 1471 GAAGATGTAGCTCAAG-CATTACATTACATTCACCAA---TCATCAGCCAA-ATTCCATG 1525 |||||||||||||||| | ||| ||||||| |||||| |||||||| | | |||||| Sbjct 1503 GAAGATGTAGCTCAAGGC-TTATATTACATACACCAAACATCATCAGC-ATTAGTCCATG 1560 Query 1526 GAAACCTTAAGTCCACTAACATCCTCCTT-GGTCACGACTTTGAAGCTTGTGTCACAGAT 1584 ||||||| || ||||| ||||||||| || || || ||||||||||| ||| | |||||| Sbjct 1561 GAAACCTAAAATCCACAAACATCCTC-TTAGGACAAGACTTTGAAGCCTGTTTAACAGAT 1619 Query 1585 TATTGTTTAAGTGTCTTAACAGACTCATC-TGTTCCTC-CCA-ATGACCCGGACATC-TC 1640 || || | ||||||||||||||||| || | | | || || |||| || ||| || || Sbjct 1620 TACTGCCTCAGTGTCTTAACAGACTCTTCATCTGCTTCACCTGATGATCCTGAC-TCATC 1678 Query 1641 TTCCTATAAAGCACCAGAGATAAGGAAATCAACA-GATAGTCGTCCCACGTCGAAATGCG 1699 |||||| ||||| || ||||| || |||||| || | ||| | | || || ||||| | Sbjct 1679 TTCCTACAAAGCTCCTGAGATCAGAAAATCATCACG-TAGAC--CA-ACTTCCAAATGTG 1734 Query 1700 ATGTTTACTCGTTCGGGGTCTTCCTCTTAGAGCTATTGACCGGTAA-AACCGCTTCGAGG 1758 ||||||| ||||| || ||||| |||| ||||| ||||| ||||| || || |||||| Sbjct 1735 ATGTTTATTCGTTTGGTGTCTTGATCTTTGAGCTTTTGACTGGTAAGAAT-GCATCGAGG 1793 Query 1759 CAACCGATTATGGAGCCAAACGATATG-TTGGATTGGGTAAGAGCAATGAG-GCAAGAAG 1816 || ||| |||||| ||| | |||||| ||| ||||||| ||||||||||| | |||||| Sbjct 1794 CATCCGTTTATGGCGCCTCATGATATGCTTG-ATTGGGTTAGAGCAATGAGAG-AAGAAG 1851 Query 1817 AAGAAAGGTCAAAGGAAGAGAATGGGCTAGAGATGATGACTCAAACGGCTTGTCTTTGCC 1876 ||||| || || ||| || ||| |||| | |||||||||| |||| ||||||||||||| Sbjct 1852 AAGAA-GG--AACGGAGGATAATAGGCTGGGGATGATGACTGAAACAGCTTGTCTTTGCC 1908 Query 1877 GTGTAACATCGCCAGAGCAAAGGCCCACTATGAAAGAAGTGATCAAAATGATTCAAGAGA 1936 |||| ||||| ||||||||||| || || |||| | ||||||| || |||||||| |||| Sbjct 1909 GTGTGACATCACCAGAGCAAAGACCAACGATGAGACAAGTGATTAAGATGATTCAGGAGA 1968 Query 1937 TTAAGGGGAGTGTTGTGATGACTGAAGAGAACGA 1970 |||||| ||||||| || | ||||||||||||| Sbjct 1969 TTAAGGAGAGTGTTATG--G-CTGAAGAGAACGA 1999 Score = 448 bits (242), Expect = 1e-124 Identities = 696/904 (77%), Gaps = 76/904 (8%) Strand=Plus/Plus Query 82 TACTTCGACTCCTT-CTTACCATCCGACGCCGTCGCACTT-CTCTCCTTCAAATCCACCG 139 |||||| ||||||| ||| || |||||||| || || || ||||| ||||||||||||| Sbjct 75 TACTTCAACTCCTTACTT-CCTTCCGACGCTGTTGC-TTTACTCTCTTTCAAATCCACCG 132 Query 140 CTGATCTCGACAACAAGCTTC-TATACTCTCTCACCGAGCCTTACGACTACTGTCAATGG 198 | |||||||||||||||| || | || || |||||||||| ||||||||||||||||||| Sbjct 133 CCGATCTCGACAACAAGC-TCTTGTATTCACTCACCGAGCGTTACGACTACTGTCAATGG 191 Query 199 CGCGGCGTCGATTGCT-CTCAAGATCGCGTCGTTCGTCTTATCCTCGACGGTGTTGGTCT 257 ||||||||| | || | |||||| ||| ||||||||||| | ||| ||| |||||||| Sbjct 192 CGCGGCGTCAAATG-TGCTCAAGGTCGTATCGTTCGTCTTGTTCTCTCCGGCGTTGGTCT 250 Query 258 CCGGGGA-AGTTTCTCACCGGAGACTCTTAGTCGTCTTGATCAGCTTCGTGTTCTTAGCC 316 ||| || | || ||| ||| ||||||||| |||||||| ||||| || ||||| || | Sbjct 251 CCGTGGCTACTT-CTCTTCGGCGACTCTTAGCCGTCTTGACCAGCTCCGAGTTCTGAGTC 309 Query 317 TTGAGAATAACTCAATCTCGGGTTCGATTCCTGATCTATCTCCTCTCGTCAATCTCAAAA 376 | ||||||||||| ||| ||| ||||||||||||| || | |||||| || |||||| Sbjct 310 TCGAGAATAACTCGCTCTTTGGTCCGATTCCTGATCTTTCACATCTCGTTAACCTCAAAT 369 Query 377 CCCTAACCCTAAGCAAGAA-TG-GTTTCTCCGGTACTCTTTCTTCT-TCAATTCTCTCTC 433 | || ||| ||| ||| || |||| |||||| || || | || || |||||||||| Sbjct 370 CTCTCTTCCTTAGCC-GAAATGAGTTT-TCCGGTGCT-TTCCCTCCGTCGATTCTCTCTC 426 Query 434 TTCGTCGGTTAACAGAA-CT-TGA-TCTATCGTTTAACAACTTCTCCGGTGAGATTCCGT 490 ||| ||||||| || || | ||| |||| ||||||||||||||| |||||||| Sbjct 427 TTCACCGGTTAAT-GATTCTCTCCCTCTCTCGT--AACAACTTCTCCGGTTCGATTCCGT 483 Query 491 CGGGGATCAATGCTCT-GAGTCGACTCAGTTCTTTAAATCTCGAGTTTAATCGACTTAAC 549 | | |||||| ||||| || || | | ||| || ||||||||||| || || ||||| Sbjct 484 CTGAGATCAACGCTCTTGAC-CGGTTAACTTCATTGAATCTCGAGTTCAACCGGTTTAAC 542 Query 550 GGAACTCTCCCGCCGTTAAATCTTTC-TTCTCTGATTTCATTTAACGTTTCCAGTAACAA 608 |||||||||||||||||||||| || || ||||| || |||||||||||| ||||||| Sbjct 543 GGAACTCTCCCGCCGTTAAATCAGTCGTT-TCTGACGTCTTTTAACGTTTCCGGTAACAA 601 Query 609 CCTCACCGGT-TTAGTTCC-GTTAACAAAGACTCTGTTACGATTCAACGCGTCTTCGTTT 666 |||||||| ||| | || |||| || |||||| | ||||||| | ||||| |||||| Sbjct 602 TCTCACCGGGGTTA-TCCCCGTTA-CACCGACTCTATCACGATTCGATGCGTCGTCGTTT 659 Query 667 TCGTCAAACCCTGGACTCTGCGGTGAGATCATTAACCGATCTTGCGGTTTACATTCTTCT 726 ||| |||||||||||||||||||||||||| ||| || |||||| || || | || Sbjct 660 AAGTCTAACCCTGGACTCTGCGGTGAGATCATAAACAGAGCTTGCGCTT--CA--CG-CT 714 Query 727 TCTCCGTTCTTTGGTTC-ACCTAAACCAAACACCACGTCATCA-ACATCTTCTGCTTCTT 784 | |||||||||||||| || ||| | ||| || ||||| ||| | | || | | || Sbjct 715 -CGCCGTTCTTTGGTTCCAC-TAA-C-AAA-ACGACGTCGTCAGA-ACCTCC-G-TTAG- 765 Query 785 CGTCTGAAGCACCGGTTATTCAAAGTGAACAGAACGGTGAAGCAGCGATGATTGTTCCAC 844 | | |||| | | || | | |||||||||| || | | ||||| || | | Sbjct 766 -GACA-AAGCGC---T----CAG-GCG--CAGAACGGTGGTGC-G-G-TGATTATTTCTC 810 Query 845 CGGTGGTTA--AA-AAG---GTTAAAAACG-GTTGG-TTAGTTCTTGGTTTCACCATTGG 896 ||||||||| || ||| | |||| | | || || ||||||||||||| |||| ||| Sbjct 811 CGGTGGTTACGAAGAAGAAAGGTAAAGA-GAGT-GGATTAGTTCTTGGTTCCACCGCTGG 868 Query 897 TCTCGCTTCT-TTGATAGTTCTAGGTCTCTGCCTCGTCGTGTTCTCGT-TGTTTATAAA- 953 ||||||||| || || ||||| ||||| |||||||| |||||||| | || | ||||| Sbjct 869 TCTCGCTTCGCTT-ATTGTTCTTGGTCTTTGCCTCGTTGTGTTCTC-TCTGGTGATAAAG 926 Query 954 AAAC 957 |||| Sbjct 927 AAAC 930 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74542609465 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5