BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G50700.1
Length=2014
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485418 jgi|Araly1|485418|fgenesh2_kg.5__1410__AT3G50700.1 2647 0.0
Ahg496927 jgi|Araly1|496927|fgenesh2_kg.8__2743__AT5G66730.1 592 5e-168
Ahg948717 jgi|Araly1|948717|scaffold_800604.1 246 4e-64
Ahg312456 jgi|Araly1|312456|fgenesh1_pm.C_scaffold_1001236 215 1e-54
> Ahg485418 jgi|Araly1|485418|fgenesh2_kg.5__1410__AT3G50700.1
Length=1983
Score = 2647 bits (1433), Expect = 0.0
Identities = 1854/2039 (91%), Gaps = 102/2039 (5%)
Strand=Plus/Plus
Query 12 AAAAATAATAATAATTGTGCCAAT--agag--aga-a-agagagagacagaagaagaaag 65
||||| |||||||||||||||||| |||| ||| | ||||||||||||||||||||||
Sbjct 1 AAAAAAAATAATAATTGTGCCAATAGAGAGAAAGAGAGAGAGAGAGACAGAAGAAGAAAG 60
Query 66 aaagGTTCCTTTGTCTCGGAACAACCAAAGAGCC-AC-C--ACCCaaaaaaaaaaaGGTT 121
||||||||||||||||||||| |||||||||||| || | | |||||||||||||||
Sbjct 61 AAAGGTTCCTTTGTCTCGGAAGAACCAAAGAGCCAACACAAAAAAAAAAAAAAAAAGGTT 120
Query 122 CTTAGCtttt-tttCTTTCTTTCACACGAAATCTCACGAGACGCC---T-TATTTCTTCT 176
| |||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||
Sbjct 121 CGTAGCTTTTCTTTCTTTCTTTCACACGAAATCTCACGAGCCGCCTTATATATTTCTTCT 180
Query 177 TCTCTGTCTCTTTCCGACGGCGTAACTCTCCGGTGGAATCTCAG-C------TC--TCTT 227
||||||||||||||||||||||||||||||||||| |||||||| | || | ||
Sbjct 181 TCTCTGTCTCTTTCCGACGGCGTAACTCTCCGGTGTAATCTCAGCCGTTAGATCTTTGTT 240
Query 228 ATCAGTAGAAGAAGTTTTGGTCTTTAAATGTAAtttttttGGTTTTGCTTTAAATTTCAA 287
||||||| ||||||||| || ||||||||||| | ||| ||| ||
Sbjct 241 TTCAGTAGGAGAAGTTTTAGTTTTTAAATGTAA------------T--TTT---TTT-AA 282
Query 288 TCGTTGTTATCAGAAAAAGTAGGTAGCaaaaaaaGAGATTTTTTACGAAAAGCAGATTGA 347
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 283 TCGTTGTTATCAGAAAAAGTAGGTAGC-AAAAAAGAGA-TTTTTACGAAAAGCAGATTGA 340
Query 348 CTGGTAGCTG-A-AACAACGGAGGAGAATTATAGAAACGAGTAAAAAA-CAAAACCCTAA 404
|||||||||| | |||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 341 CTGGTAGCTGAAGAACAACGGAGGAGAATTATAGAAA-GAGTAAAAAATAAAAACCCTAA 399
Query 405 AGGTTGAAACTTGGTTGACGaaaaaaaTGAGCTGAtttttttttCTTCATTTATTTCATT 464
|||||||||||||||||||| ||||| |||| | |||||||||||||||||||||||
Sbjct 400 AGGTTGAAACTTGGTTGACG---AAAATAAGCTCAAATTTTTTTCTTCATTTATTTCATT 456
Query 465 CTTAACTCTTT-TTCACATATTTAAGAATCAGTAAGaaac---------aaaaaaaaaca 514
|| |||| ||| || ||||||||||||||||||||||| |||||||||||
Sbjct 457 CTAAACT-TTTGTT---ATATTTAAGAATCAGTAAGAAACAAAAAAAAAAAAAAAAAACA 512
Query 515 gagtgagact--aaaaaaaaaGATGCCGGTAGATTTAGATAACTCCTCCACAGTTTCCGG 572
|||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 513 GAGTGAGACTAAAAAAAAAAAGATGCCGGTTGATTTAGATAACTCTTCCACAGTTTCCGG 572
Query 573 TGAAGCAAGTGTTTCAATCTCATCCACCGGAAACCAAAACCCACTTCCAAACTCCACCGG 632
||||||||||||||| |||| ||||||||| | ||| ||||||||
Sbjct 573 TGAAGCAAGTGTTTCTATCTTATCCACCGG------------A-----AAA-TCCACCGG 614
Query 633 AAAGAAGAAACGTAACCTCCCTGGCATGCCTGATCCAGAGTCAGAAGTTATAGCTTTATC 692
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 615 AAAGAAGAAACGTAACCTCCCCGGCATGCCTGATCCAGAGTCAGAAGTTATAGCTTTATC 674
Query 693 ACCAAAAACATTACTAGCAACAAACAGATTTGTTTGTGAAATCTGTAACAAAGGGTTTCA 752
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 675 ACCAAAAACATTACTAGCAACAAACAGATTCGTATGTGAAATCTGTAACAAAGGGTTTCA 734
Query 753 AAGAGACCAGAATCTTCAACTTCATCGTCGTGGACACAATTTACCATGGAAGCTTCGTCA 812
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 735 AAGAGACCAAAATCTTCAACTTCATCGCCGTGGACACAATTTACCATGGAAGCTTCGTCA 794
Query 813 GAAATCAAACAAAGAAGTGAAGAAAAAAGTCTATGTTTGTCCTGAAGTTAGTTGTGTTCA 872
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 795 GAAATCGAACAAAGAAGTGAAGAAAAAAGTCTATGTTTGTCCTGAAGTTAGTTGTGTTCA 854
Query 873 TCACGACCCTTCACGTGCTTTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAA 932
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 855 TCATGACCCTTCACGTGCTTTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAA 914
Query 933 ACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCTAAGAAATACGCTGTTCAATCTGA 992
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 915 ACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCAAAGAAATACGCTGTTCAATCTGA 974
Query 993 TTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGTACTCT 1052
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 975 TTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGGACTCT 1034
Query 1053 GTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCTTTTTGTGATGCTTTGGCTGAAGA 1112
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1035 GTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCATTTTGTGATGCTTTGGCTGAAGA 1094
Query 1113 AAATGCGAGAAGTCATCATAGTCAGAGTAAGAAACAGAATCCTGAAATTTTGACCCGGAA 1172
|| ||||||||||||| | | ||||||||||||||||||||| || ||||||||||||||
Sbjct 1095 AAGTGCGAGAAGTCAT-A-A-TCAGAGTAAGAAACAGAATCCAGACATTTTGACCCGGAA 1151
Query 1173 AAACCCGGTACCCAACCCGGTTCCTGCTCCGGTGGATACTGA---GTCTGCTAAAATCAA 1229
||| ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1152 AAAACCGGTACCCGACCCGAATCCTGCTCCGGTGGATACTGATCAGTCTGCTAAAATCAA 1211
Query 1230 ATCCTCCTCGACTTTAACAATTAAGCAATCAGAATCTCCAAAAACCCCTCCTGAAATCGT 1289
||| |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||
Sbjct 1212 ATCTTCCTCGACTTTAACAATTAAGCAATCAGGATCCCCCAAAACCCCTCCTGAAATCGT 1271
Query 1290 TCAAGAAGCTCCAAAACCGACCAGTTTAAATGTTGTTACAAGCAACGGTGTTTTCGCAGG 1349
||||||||||||||||| |||| || |||||||||||||| ||| ||| |||||||||||
Sbjct 1272 TCAAGAAGCTCCAAAACTGACCGGTGTAAATGTTGTTACACGCAGCGGGGTTTTCGCAGG 1331
Query 1350 CTTATTCGAATCTTCCTCGGCTTCTCCAAGTATATACACAACATCGTCTTCTTCGA-AGA 1408
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 1332 CTTATTCGAATCTTCCTCGGCTTCTCCAAGCATATACACAACATCGTCTTCTTCGCCA-A 1390
Query 1409 GTCTTTTCGCGTCATCTTCGTCCATTGAACCTATCTCTTTGGGTCTTTCAACAAGTCATG 1468
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1391 GTCTTTTCGCGCCATCTTCGTCCATCGAACCTATCTCTTTGGGTCTTTCAACAAGTCATG 1450
Query 1469 GATCATCCTTTCTTGGGTCAAACCGGTTCCACGCTCAGCCCGCGATGTCAGCAACCGCTT 1528
||||||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||
Sbjct 1451 GATCATCCTTTCTCGGGTCAAACCGGTTCCAAGCTCAACCAGCGATGTCAGCAACCGCTT 1510
Query 1529 TACTTCAAAAAGCAGCTCAAATGGGAGCAGCTTCTTCAGGAGGTTCATTGCTTCACGGGT 1588
|||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1511 TACTTCAAAAGGCAGCTCAAATGGGAGCATCTTCTTCAGGAGGTTCATTGCTTCGCGGGT 1570
Query 1589 TAGGGATAGTTTCATCCACTTCAACTTCTATAGACGCAATAGTCCCTCATGGACTAGGAT 1648
|||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1571 TAGGGATAGTTTCATCAACTTCAACTTCTATGGACTCAATAGTCCCTCATGGACTAGGAT 1630
Query 1649 TAGGACTGCCTTGTGGTGGCGAAAGCAGCTCGGGTTTAAAAGAGCTTATGATGGGGAATT 1708
||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 1631 TAGGACTGCCTTGTGGTGGCGAAAGCAGCTCGGGTTTGAAAGAGCTCATGATGGGTAATT 1690
Query 1709 CATCGGTGTTTGGTCCGAAACAAACGACATTAGACTTCCTCGGTTTAGGTAGAGCGGTTG 1768
|||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1691 CATCCGTGTTTGGTCCGAAACAAACAACATTAGACTTTCTCGGTTTAGGTAGAGCGGTTG 1750
Query 1769 GTAACGGAAATGGTCCAAGTAACGGACTATCTACTCTAGTCGGAGGAGGAACCGGCATCG 1828
|||||||||||||||||||||||||||||||| |||||||||||||| | | ||||||||
Sbjct 1751 GTAACGGAAATGGTCCAAGTAACGGACTATCTGCTCTAGTCGGAGGAAGCAGCGGCATCG 1810
Query 1829 ATATGGCAACAACATTTGGATCAGGAGAGTTTTCAGGGAAAGACATTAGTAGAAGAAAAT 1888
| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 ACGTGGCAACGACATTTGGATCAGGAGAGTTTTCAGGGAAAGACATTAGTAGAAGAAAAT 1870
Query 1889 CATAAGTAGAGTAA-ATGAATGTGT--TTGAGAGGGTTTTAGATGTTCTTGTTCAATAGG 1945
|||||||||||||| | | || | ||| | ||||||||||||||||||||||||||
Sbjct 1871 CATAAGTAGAGTAATA-GTTTGAGAAATTG-G-GGGTTTTAGATGTTCTTGTTCAATAGC 1927
Query 1946 TTAGTGTGAGAATTTGAAAACTTCCCTTTGAAAGAAAGGGTTCACTATTTAATATATAT 2004
|||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1928 TTAGTGTGAG--TTTGAAA-CTTCCCTTTGAAAGAAAGGGTTCAATATTTAATATATAT 1983
> Ahg496927 jgi|Araly1|496927|fgenesh2_kg.8__2743__AT5G66730.1
Length=2171
Score = 592 bits (320), Expect = 5e-168
Identities = 525/621 (85%), Gaps = 25/621 (4%)
Strand=Plus/Plus
Query 535 ATGCCGGTAGATTTAGATAACTCCTCCACAGTTTCCGGTGAAGCAAGTGTTTCAATCTCA 594
|||||||| ||||||||||| ||||| ||||||||||| || |||| | | |||||
Sbjct 481 ATGCCGGTTGATTTAGATAATTCCTCTACAGTTTCCGGCGATGCAA--G---C-GTCTCA 534
Query 595 TCCACCGGAAACCAAAA-CCCACTTCCAAACTCCACCGGAAAGAAGAAACGTAA-CCTCC 652
|| |||||||||||||| | ||| ||||| ||| ||| ||||||||||| || | |||
Sbjct 535 TCGACCGGAAACCAAAATCAAACTCCCAAA-TCCGTCGGGAAGAAGAAACGGAATCTTCC 593
Query 653 CTGGCATGCCTGATCCAGA-GTCAGAAGTTATAGCTTTATCACCAAAAACA-TTACTAGC 710
| || |||||||||||||| | | ||||| |||||||| ||||| |||||| ||| | ||
Sbjct 594 C-GGAATGCCTGATCCAGACG-CGGAAGTGATAGCTTTGTCACCTAAAACACTTA-TGGC 650
Query 711 AAC-AAACAGATTTGTTTGTGAAATCTGTAACAAAGGGTTTCAAAGAGACCAGAATCTTC 769
||| || | |||| ||||| ||||||||||||||||| |||||| | |||||||||||||
Sbjct 651 AACGAATC-GATTCGTTTGCGAAATCTGTAACAAAGGTTTTCAACGTGACCAGAATCTTC 709
Query 770 AACTTCATCGTCGTGGACACAAT-TTACCATGGAAGCTTCGTCAGAAATCAAACAAAGAA 828
| |||||||||||||| |||||| || |||||||| ||| | |||| ||| | ||||||
Sbjct 710 AGCTTCATCGTCGTGGTCACAATCTT-CCATGGAAACTTAGACAGAGATCGAGTAAAGAA 768
Query 829 GTGAAGAAAAAAGTCTATGTTTGTCCTGAAGT-TAGTTGTGTTCATCACGACCCTTCACG 887
|||| ||| || || ||||||||||||| | | ||||||||||||| ||||| |||||
Sbjct 769 GTGAGGAAGAAGGTTTATGTTTGTCCTG-TTTCTGGTTGTGTTCATCATGACCCGTCACG 827
Query 888 TGCT-TTAGGAGATCTAACTGGAATCAAGAAACACTTTTGTCGGAAACATGGTGAGAAGA 946
|||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 828 TGCTCTT-GGAGATCTTACTGGAATCAAGAAACACTTTTGTCGGAAACACGGTGAGAAGA 886
Query 947 AGTGGAAATGTGATAAATGTTCTAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCATT 1006
| | || ||||| |||||||||||||| || ||||||||||| |||||||||||||| |
Sbjct 887 AATTCAAGTGTGAGAAATGTTCTAAGAAGTATGCTGTTCAATCAGATTGGAAAGCTCACT 946
Query 1007 CCAAGATTTGTGGTACTAAAGAGTATAAATGTGATTGTGGTACTCTGTTTTCTAGGAGGG 1066
| ||||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||| |
Sbjct 947 CGAAGATTTGTGGCACTAAGGAGTATAAATGCGATTGTGGAACTCTGTTTTCTAGGAGAG 1006
Query 1067 ATAGTTTTATAACGCATAGAGCTTTTTGTGATGCTTTGGCTGAAGAAAATGCGAGAAGTC 1126
|||| |||||||||||||||||||| |||||||| ||||||||||| | ||||| | |
Sbjct 1007 ATAGCTTTATAACGCATAGAGCTTTCTGTGATGCGTTGGCTGAAGAGAGTGCGA-A-GA- 1063
Query 1127 ATCATAGTCAGAGTAAGAAAC 1147
|||||| ||| || |||||||
Sbjct 1064 ATCATACTCAAAGCAAGAAAC 1084
Score = 76.8 bits (41), Expect = 6e-13
Identities = 44/45 (98%), Gaps = 1/45 (2%)
Strand=Plus/Plus
Query 315 aaaaaaaGAGATTTTTTACGAAAAGCAGATTGACTGGTAGCTGAA 359
||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 304 AAAAAAAGAGA-TTTTTACGAAAAGCAGATTGACTGGTAGCTGAA 347
> Ahg948717 jgi|Araly1|948717|scaffold_800604.1
Length=1442
Score = 246 bits (133), Expect = 4e-64
Identities = 383/499 (77%), Gaps = 36/499 (7%)
Strand=Plus/Plus
Query 634 AAGAAGAA-ACGTAACCTCCCTGG-CATGCCTGATCCAG-AGTCAGAAGTTATAGCTTTA 690
|||||||| | | || ||||| || || |||||||| | || | ||||| |||||| ||
Sbjct 123 AAGAAGAAGA-GAAATCTCCCAGGAAAT-CCTGATCCGGAAG-CTGAAGTGATAGCTCTA 179
Query 691 T-CACCAAAAACATTACTAGCAACAAACAGATTTGTTTGTGAAATCTGTAACAAAGGGTT 749
| | |||| | | | | | || |||||| | || | || || |||||| |||| ||||
Sbjct 180 TCCCCCAAGACCCTGA-TGGCTACAAACCGGTTCCTATGCGAGATCTGTGGCAAA-GGTT 237
Query 750 T-CAAAGAGACCAGAATCTT-CAACTTCATCGTCGTGGACACAAT-TTACCATGGAAGCT 806
| ||||||||||| || ||| || |||||||| || ||||||||| || ||||||||| |
Sbjct 238 TCCAAAGAGACCA-AAACTTACAGCTTCATCGGCGAGGACACAATCTT-CCATGGAAG-T 294
Query 807 TCG--TCAGA-AATCAAACAAAGAAGTGAAGAAAA-AAGTCTATGTTTG-TCC-TGAAGT 860
| | |||| | ||| |||||||||| |||||| ||||| ||||| || ||||
Sbjct 295 T-GAAGCAGAGGA-CAAGCAAAGAAGTG-AGAAAACGTGTCTACGTTTGCCCCGAGAAG- 350
Query 861 TAGTTGTGTTCATCA-CGAC-CCTTC-ACGTGCTTTAGGAGATCTAACTGGAATCAAGAA 917
| || || || || | || || || | | ||| |||| ||||| || |||||||||||
Sbjct 351 -ACATGCGTCCACCATC-ACTCC-TCTA-GAGCTCTAGGCGATCTCACCGGAATCAAGAA 406
Query 918 ACACTTT-TGTCGGAAACATGGTGAGAAGAAGTGGAAATGTGATAAATGTTCTAAGAAAT 976
|| ||| || |||||||| || |||||||||||||| || || |||||| | |||| ||
Sbjct 407 GCA-TTTCTGCCGGAAACACGGCGAGAAGAAGTGGAAGTGCGAGAAATGTGCCAAGAGAT 465
Query 977 ACGCTGTTCAATCTGATTGGAAAGCTCATTCCAAGATTTGTGGTACTAAAGAGTATAAAT 1036
|||| || |||||||||||||||||||||||||||| ||||||||||| |||||| |
Sbjct 466 ACGCAGTCCAATCTGATTGGAAAGCTCATTCCAAGACTTGTGGTACTAGAGAGTACCGTT 525
Query 1037 GTGATTGTGGTACTC-TGTTTTCTAGGAGGGATAGTTTTATAACGCATAGAGCTTTTTGT 1095
| || ||||| || | | ||||| ||| | || || || || || ||||||||||||||
Sbjct 526 GCGACTGTGGCAC-CATTTTTTCAAGGCGAGACAGCTTCATCACTCATAGAGCTTTTTGC 584
Query 1096 GATGCTTTGGCTGAAGAAA 1114
||||| || || |||||||
Sbjct 585 GATGCCTTAGCGGAAGAAA 603
> Ahg312456 jgi|Araly1|312456|fgenesh1_pm.C_scaffold_1001236
Length=1485
Score = 215 bits (116), Expect = 1e-54
Identities = 259/328 (79%), Gaps = 10/328 (3%)
Strand=Plus/Plus
Query 727 TGTGAAATCTGTAACAAAGGGTTTCAAAGAGACCAGAATCTTCAACTTCATC-GTCGTGG 785
|||||| | || ||||||||||| ||||| || |||||||| || ||||| | | | ||
Sbjct 196 TGTGAAGTGTGCAACAAAGGGTTCCAAAGGGAACAGAATCTGCAGCTTCA-CAGGAGGGG 254
Query 786 ACACAA-TTTACCATGGAAGCTTCGTCAGAAA-TCAAACAAAGAAGTGAAGAAAAAAGTC 843
|||||| || ||||||||||| || ||| || ||||||||||||| || || ||
Sbjct 255 ACACAACCTT-CCATGGAAGCTGAAACA-AAAGTCCAACAAAGAAGTGAGGAGGAAGGTG 312
Query 844 TATGTTTGTCCTGAAG-TTAGTTGTGTTCATCACGACCCTTCACGTGCTTTAGGAGATCT 902
|| |||| || || | | | || || || || ||||| |||||||| | ||||| ||
Sbjct 313 TACCTTTGCCCGGAGGCCTCG-TGCGTCCACCATGACCCGGCACGTGCTCTCGGAGACCT 371
Query 903 AACTGGAATCAAGAAACACTT-TTGTCGGAAACATGGTGAGAAGAAGTGGAAATGTGATA 961
|| ||||||||||| || || | |||||| || ||||||||||||||||| || ||||
Sbjct 372 CACCGGAATCAAGAAGCA-TTACTATCGGAAGCACGGTGAGAAGAAGTGGAAGTGCGATA 430
Query 962 AATGTTCTAAGAAATACGCTGTTCAATCTGATTGGAAAGCTCATTCCAAGATTTGTGGTA 1021
|||| |||||| ||||||||||||||||||||||||||||| || |||| |||||||
Sbjct 431 AATGCTCTAAGCGTTACGCTGTTCAATCTGATTGGAAAGCTCACTCTAAGACCTGTGGTA 490
Query 1022 CTAAAGAGTATAAATGTGATTGTGGTAC 1049
| ||||||||| |||||| ||||||||
Sbjct 491 CCAAAGAGTATCGATGTGACTGTGGTAC 518
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75723407060
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5