BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G51110.1
Length=2223
Score E
Sequences producing significant alignments: (Bits) Value
Ahg323672 jgi|Araly1|323672|fgenesh1_pm.C_scaffold_5001216 1812 0.0
Ahg947537 jgi|Araly1|947537|scaffold_703766.1 1624 0.0
Ahg929053 jgi|Araly1|929053|scaffold_301510.1 1554 0.0
Ahg330810 jgi|Araly1|330810|fgenesh1_pm.C_scaffold_8000153 1522 0.0
> Ahg323672 jgi|Araly1|323672|fgenesh1_pm.C_scaffold_5001216
Length=1869
Score = 1812 bits (981), Expect = 0.0
Identities = 1219/1329 (92%), Gaps = 35/1329 (3%)
Strand=Plus/Plus
Query 765 TTGTGTACGAACGCGCCATTGAGATGCTTAAAGACGTCGAAGAAGAAGCTGAGATGATCT 824
|||||||||||||||||||| || | |||||| ||||||||||||||||||||||
Sbjct 559 TTGTGTACGAACGCGCCATT--GA-G-----AGACGTTGAAGAAGAAGCTGAGATGATCT 610
Query 825 TTGTGGCCTTTGCTGAGTTTGAAGAACTATGTAAAGAAGTGGAACGGGCTAGGTTTCTTT 884
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 611 TTGTGGCCTTTGCTGAGTTTGAAGAAGGGTGCAAAGAAGTGGAACGGGCTAGGTTTCTTT 670
Query 885 ACAAGTATGCTCTTGATCATATCCCTAAAGGAAGAGCTGAGGATTTGTACAAGAAGTTTG 944
|||||| |||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 671 ACAAGTTTGCTCTTGATCATATCCCTAAAGGAAGAGCTGAGGATTTGTATAACAAGTTTG 730
Query 945 TGGCGTTTGAGAAGCAGTATGGGAATAAGGAAGGTATTGATGATGCCATTGTTGGCAGGA 1004
||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| ||
Sbjct 731 TGGCGTTTGAGAAACAGTATGGGGATAAGGAAGGGATTGATGATGCCATTGTTGGCAAGA 790
Query 1005 GAAAG-TTACAGTATGAAGGTGAAGTGAGGAAGAACCCTTTGAACTACGATTCTTGGTTC 1063
||||| || | |||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 791 GAAAGCTT-CTGTATGAAGGTGAAGTGAGGAAGAACCCTTTGAACTATGATTCCTGGTTC 849
Query 1064 GATTACATTAGCTTAGAGGAGACTTTGGGGGATAAAGATAGGATCAGAGAAGTCTATGAG 1123
||||||||||| || ||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 850 GATTACATTAGGTTGGAGGAGACTTTGGGGAATAAAGATAGGATCAGAGATCTCTATGAG 909
Query 1124 AGGGCTATTGCTAATGTTCCACTCGCTGAGGAGAAACGATACTGGCAGAGATATATCTAC 1183
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 910 AGGGCTATTGCTAATGTTCCACCCGCCCAGGAGAAACGATACTGGCAGAGATATATCTAC 969
Query 1184 TTGTGGATTGATTATGCACTGTTTGAAGAGATTCTAGCTGAAGACGTGGAGCGTACTCGA 1243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 970 TTGTGGATTGATTATGCACTGTTTGAAGAGATTGTAGCTGAAGACGTGGAGCGTACTCGA 1029
Query 1244 GCTGTGTACAGAGAATGCCT-CAATCTTATCCCCTCACTCCAAATTCTCTTTTGCCAAGA 1302
|||||||||||||||||||| | |||||||| |||||||||||||||||||||||||
Sbjct 1030 GCTGTGTACAGAGAATGCCTTCTG-CTTATCCCG-CACTCCAAATTCTCTTTTGCCAAGA 1087
Query 1303 TATGGTTGCTCGCTGCACAGTTTGAGATCAGGCAATTGAATCTCTCGGGTGCTCGGCGGA 1362
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||
Sbjct 1088 TATGGTTGCTCGCTGCACAGTTTGAGATCAGGCAACTGAATCTCTCCGGTGCTCGGCAGA 1147
Query 1363 TACTAGGAAACGCCATTGGCAAAGCTCCAAAGCATAAGATTTTCAAGAAATACATTGAGA 1422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1148 TATTAGGAAACGCCATTGGCAAAGCTCCAAAGCATAAGATTTTCAAGAAATACATTGAGA 1207
Query 1423 TTGAACTCCACTTGGGAAACATAGATAGATGTAGAAAGCTGTATGCGCGGTATCTTGAAT 1482
| ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1208 TCGAACTCCGCTTGGGAAACATAGATAGATGTAGAAAACTGTACACGCGGTATCTTGAAT 1267
Query 1483 GGTCTCCTGAGAGTTGCTATGCTTGGACCAAGTTTGCTGAGTTTGAGAGGT-CTCTTGCT 1541
||||||||||||||||||||| | | | | || | | ||||| | || | |||
Sbjct 1268 GGTCTCCTGAGAGTTGCTATGGT---ATCTTGAATGGTCTCCT-GAGAGTTGCTAT-GCT 1322
Query 1542 -GAAACAGAACGAGCTAGAGCTATTTTTGAGCTTGCAATATCTCAGCCTGTTCTTGACAC 1600
| | || |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1323 TGGATCAAAACGAGCTAGAGCTATTTTTGAACTTGCAATATCTCAGCCTGTTCTTGACAC 1382
Query 1601 CCCCGAGCTGCTATGG--GGCATACATTGACTTTGAGATATCACTAGGGGAATTAGAGAG 1658
|||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 1383 CCCCGAGCTGCTATGGAAGGCATACATTGATTTTGAGATATCACTAGGGGAATTAGAGAG 1442
Query 1659 GACACGAGCTTTATATGAGCGACTCTTGGACCGTACAAAGCATTACAAGGTGTGGCTTAG 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1443 GACACGAGCTTTATATGAGCGACTCTTGGACCGTACAAAGCATTACAAGGTGTGGCTTAG 1502
Query 1719 TTTTGCAAAGTTTGAAGCTTCTGCTGCTCAAGGC-CAAGAAGATACTATTGAACATGCCA 1777
|||||||||||||||||||||||||||||||| | || | || | ||||||| ||||
Sbjct 1503 TTTTGCAAAGTTTGAAGCTTCTGCTGCTCAAGATACT-GATGTTATTCTTGAACACGCCA 1561
Query 1778 GAGC-AGTTTTCGATAGAGCCAACACATACTACAAAGAGTCGAAACCGGAGCTCAAGGAA 1836
|||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1562 GAGCGA-TTTTCGATAGAGCCAACACATACTACAAAGAGTCCAAACCGGAGCTCAAGGAA 1620
Query 1837 GAACGAGCTAACCTGTTGGAAGATTGGCTGAACATGGAGGCTAGCTTTGGT------G-- 1888
||||||||||| |||||||| |||||||||||||||||||| ||||||||| |
Sbjct 1621 GAACGAGCTAAGCTGTTGGAGGATTGGCTGAACATGGAGGCCAGCTTTGGTATTCCCGGG 1680
Query 1889 -ATGTTAGTGCTGTTCAATCGAAGCTCCCCAAGAAGCTCAAGAAGAGAATGCCAATCACT 1947
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 1681 GATGTTAGTGCTGTTCAATCGAAGCTCCCAAAGAAGCTCAAGAAGAGAAAGCCAATCACT 1740
Query 1948 AGAGAAGACGGTGAGACAGAGTATGAAGAGTACATTGATTACTTCTTCCCTGAAGAATCA 2007
|||||||||||||| |||||||||||||| ||||||||||| || ||||| |||||||||
Sbjct 1741 AGAGAAGACGGTGAAACAGAGTATGAAGAATACATTGATTATTTGTTCCCAGAAGAATCA 1800
Query 2008 CAGACGATGAATCTCAAGATTCTTGAAGCTGCTCATAAATGGAAGAAGCAGAAGGTCGAT 2067
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1801 CAGACGATGAATCTCAAGATTCTTGAAGCTGCTCATAAATGGAAGAAGCAGAAGGTTGCT 1860
Query 2068 GCTTTCTGA 2076
|||||||||
Sbjct 1861 GCTTTCTGA 1869
Score = 355 bits (192), Expect = 7e-97
Identities = 308/358 (86%), Gaps = 31/358 (9%)
Strand=Plus/Plus
Query 92 ATGATTCCAAGGATGGTTAAGAACAAAACCCCTGCTCCGGTTCAAATCACGGCGGAGCAG 151
||||||| ||||| | ||||| ||||| ||||| ||| | ||||||||| ||||||||
Sbjct 1 ATGATTCTAAGGA---TAAAGAATAAAACACCTGCGCCGCTACAAATCACGTCGGAGCAG 57
Query 152 GTTTTGAAGGAGGCgagagagagagagGACAGTCGCATCCTGCGGCCGCCTAAACAGAAG 211
|||||| ||||||||||||||||||||||| |||| || | |||||||||||||||||
Sbjct 58 ATTTTGAGGGAGGCGAGAGAGAGAGAGGACACTCGC--CC-GAGGCCGCCTAAACAGAAG 114
Query 212 ATCACAGATTCGGATGAGCTT---G-C--C-GA----G--T---A-CA---G-ACTCCGA 250
||||||||||||| ||||||| | | | || | | | | | |||||||
Sbjct 115 ATCACAGATTCGGCTGAGCTTACGGACTACAGACTGCGACTAGAAGAATTGGTACTCCGA 174
Query 251 CGTCGGAAGGAGTTTGAGGACCAGATCCGCGGCGCAAAAACGAACTCA-CAAGTTTGGGT 309
||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||
Sbjct 175 CGTCGGAAGGAGTTTGAGGACAAGATCCGCGGCGCAAAAACGAAC-AATCAAGTTTGGGT 233
Query 310 GAGGTATGCTGATTGGGAAGAGTCTCAGAAGGATCACGATCGTGCTCGGAGCGTGTGGGA 369
||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 234 GAGGTATGCGGATTGGGAAGAGTCGCAGAAGGATCACGATCGTGCTCGGAGCGTTTGGGA 293
Query 370 ACGAGCTTTGGA-AGACGAGAGTTACAGGAACCATACGCTCTGGCTCAAATACGCAGA 426
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 294 ACGAGCTTT-GAGAGACGAGAGTTACAGGAACCATACGCTCTGGCTCAAATACGCAGA 350
Score = 315 bits (170), Expect = 1e-84
Identities = 197/210 (94%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 523 TATTCACATGGAGGAGATACTTGGTAATATCGACGGAGCTAGAAAGATTTTTGAACGGTG 582
|||||||||||||||||||||||| ||||||| |||||||||| || | |||||||||||
Sbjct 353 TATTCACATGGAGGAGATACTTGGGAATATCGCCGGAGCTAGAGAGGTATTTGAACGGTG 412
Query 583 GATGGATTGGTCACCAGATCAACAAGCTTGGCTCTGTTTTATCAAATTCGAACTTAGGTA 642
||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 413 GATGGTTTGGTCACCGGATCAACAAGCTTGGCTCTCTTTTATCAAATTCGAACTTAGGTA 472
Query 643 TAACGAAATCGAACG-GTCAAGATCGATTTACGAGAGATTTGTGCTTTGCCATCCTAAAG 701
||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||
Sbjct 473 TAACGAAATCGAACGCG-CAAGATCGATTTACGAGAGATTTGTGCTTTGCCATCCAAAAG 531
Query 702 CTTCTTCCTTTATTCGATACGCAAAGTTTG 731
||||||||||||||||||| || |||||||
Sbjct 532 CTTCTTCCTTTATTCGATATGCCAAGTTTG 561
Score = 75.0 bits (40), Expect = 2e-12
Identities = 42/43 (98%), Gaps = 0/43 (0%)
Strand=Plus/Plus
Query 1471 GGTATCTTGAATGGTCTCCTGAGAGTTGCTATGCTTGGACCAA 1513
||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1288 GGTATCTTGAATGGTCTCCTGAGAGTTGCTATGCTTGGATCAA 1330
> Ahg947537 jgi|Araly1|947537|scaffold_703766.1
Length=2156
Score = 1624 bits (879), Expect = 0.0
Identities = 1403/1654 (85%), Gaps = 44/1654 (3%)
Strand=Plus/Plus
Query 110 AAGAACAAAACCCCTGCTCCGGTTCAAATCACGGCGGAGCAGGTTTTGAAG-GAGGCgag 168
||||||||||| || || ||||| |||||||| || || ||| |||| ||| || || |
Sbjct 111 AAGAACAAAACTCCGGCGCCGGTGCAAATCACCGCCGAACAGATTTT-AAGAGAAGCTCG 169
Query 169 agagagagagGACAGTC-GCATCCTGCGGCCGCCTAAACAGAAGATCACAGATTCGGA-T 226
||||||| | || || | | | | || || ||||| || || ||||| ||||| | |
Sbjct 170 AGAGAGACAAGA-AG-CTG-A-GATCCGTCCTCCTAAGCAAAAAATCACTGATTC-CACT 224
Query 227 GAGCTTGCCGAGTACAGACTCCGACGTCGGAAGGAGTTTGAGGACCAGATCCG-CGGCGC 285
|||||| |||| ||||||||||| || | ||||| ||||| ||||||||||| | ||||
Sbjct 225 GAGCTTTCCGACTACAGACTCCGCCGGAGAAAGGAATTTGAAGACCAGATCCGTC-GCGC 283
Query 286 AAAAACGAAC-TCACAAGTTTGGGTGAGGTATGCTGATTGGGAAGAGTCTCAGAAGGATC 344
| | |||| | || |||||||| | ||| ||| | ||||||||||| ||||| |||
Sbjct 284 TAGATGGAACAT-TCATGTTTGGGTCAAGTACGCTCAATGGGAAGAGTCACAGAAAGATT 342
Query 345 ACGATCGTGCTCGGAGCGTGTGGGAACGAGCTTTGGAAGACGAGAGTTACAGGAACCATA 404
||| ||||||||| || || ||||||||||| | |||| |||| ||||||||||||||
Sbjct 343 ACGCTCGTGCTCGAAGTGTTTGGGAACGAGCCATAGAAG--GAGA-TTACAGGAACCATA 399
Query 405 CGCTCTGGCTCAAATACGCAGAGTTCGAGATGAGGAACAAATCCGTCAACCA-TGCGAGG 463
|||| |||||||||||||| ||||| ||||||| |||||| | ||| || || ||||||
Sbjct 400 CGCTTTGGCTCAAATACGCTGAGTTTGAGATGAAGAACAAGTTCGTGAA-CAGTGCGAGA 458
Query 464 AACGTTTGGGATCGAGCCGTGAAGATTCTACCTCGCGTGGACCAGTTTTGGTATAAGTAT 523
||||||||||||||||| || | | |||| ||||| || |||||| ||||||| ||||||
Sbjct 459 AACGTTTGGGATCGAGCTGTTACGCTTCTTCCTCGTGTAGACCAGCTTTGGTACAAGTAT 518
Query 524 ATTCACATGGAGGAGATACTTGGTAATATCGACGGAGCTAGAAAGATTTTTGAACGGTGG 583
||||| ||||||||||||||||| ||||||| ||||||||| |||||||||||||||||
Sbjct 519 ATTCATATGGAGGAGATACTTGGGAATATCGCCGGAGCTAGGCAGATTTTTGAACGGTGG 578
Query 584 ATGGATTGGTCACCAGATCAACAAGCTTGGCTCT-GTTTTATCAAATTCGAACTTAGGTA 642
|||||||||||||| |||||||||| |||||||| |||| || |||||||||||||||||
Sbjct 579 ATGGATTGGTCACCGGATCAACAAGGTTGGCTCTCGTTT-ATTAAATTCGAACTTAGGTA 637
Query 643 TAACGAAATCGAACGGTCAAGATCGATTTACGAGAGATTTGTGCTTTGCCATCCTAAAGC 702
||| |||||||||||| | ||| |||| |||||||||||||||||||| ||||| || |
Sbjct 638 TAATGAAATCGAACGGGCTAGAACGATATACGAGAGATTTGTGCTTTGTCATCCGAAGGT 697
Query 703 TTCTTCCTT-TATTCGATACGCAAAGTTTGAGATGAAGAACAG-TCAAGTTTCGC-TTGC 759
|||| | || |||| |||| || |||||||||||||| | | | ||||| ||| |||
Sbjct 698 TTCTGC-TTATATTAGATATGCTAAGTTTGAGATGAA-AGGTGGTGAAGTTGCGCGTTGT 755
Query 760 GAGGATTGTGTACGAACGCGCCATTGAGATGCTTAAAGACGTCGAAGAAGAAGCTGAG-A 818
|||| |||||| ||||| || | |||| |||| || | || |||||||||||| |
Sbjct 756 -AGGAGTGTGTATGAACGTGCTACAGAGAAGCTTGCTGA--T-GATGAAGAAGCTGAGCA 811
Query 819 TGATCTTTGTGGCCTTTGCTGAGTTTGAAGAACTATGTAAAGAAGTGGAACGGGCTAGGT 878
| |||||||||| ||||| ||||||||||||| |||||| ||||| ||| |||||||||
Sbjct 812 -GCTCTTTGTGGCGTTTGCGGAGTTTGAAGAACGATGTAAGGAAGTAGAAAGGGCTAGGT 870
Query 879 TTCTTTACAAGTATGCTCTTGATCATATCCCTAAAGGAAGAGCTGAGGATTTGTACAAGA 938
|| | || |||| ||||||||||||||| |||||||||||||||||||||||||| | ||
Sbjct 871 TTATCTATAAGTTTGCTCTTGATCATATTCCTAAAGGAAGAGCTGAGGATTTGTATAGGA 930
Query 939 AGTTTGTGGCGTTTGAGAAGCAGTATGG-GAATAAGGAAGGTATTGATGATGCCATTGTT 997
|||||||||| ||||||||||||||||| || ||||||||| ||||| ||||||||||||
Sbjct 931 AGTTTGTGGCTTTTGAGAAGCAGTATGGTGA-TAAGGAAGGGATTGAGGATGCCATTGTT 989
Query 998 GGCAGGAGAAAGTTACAGTATGAAG-GTGAAGTGAGGAAGAACCCTTTGAACTACGATTC 1056
|| | ||| | ||| |||||||||| | |||||||||||||| |||| ||||| |||||
Sbjct 990 GGGAAGAGGAGGTTTCAGTATGAAGAG-GAAGTGAGGAAGAATCCTTCAAACTATGATTC 1048
Query 1057 TTGGTTCGATTACATTAGCTTAGAGGAGACTTTGGGGGATAAAGATAGGATCAGAGAAGT 1116
||||| ||||| |||| ||||| |||| | ||||| | |||||||||||||||||| |
Sbjct 1049 GTGGTTTGATTATGTTAGGTTAGAAGAGAGTGTGGGGAACAAAGATAGGATCAGAGAAAT 1108
Query 1117 CTATGAGAGGGCTATTGCTAATGTTCCAC-TCGCTGAGGAGAAACGATACTGGCAGAGAT 1175
||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||
Sbjct 1109 CTATGAGAGGGCTATTGCTAATGTTCCACCT-GCTGAGGAGAAACGATACTGGCAAAGAT 1167
Query 1176 ATATCTA-CTTGTGGATTGATTATGCACTGTTTGAAGAGATTCTAGCTGAAGACGTGGAG 1234
||||||| ||| |||||| |||||||| ||| ||||||||| | ||||||| || |||
Sbjct 1168 ATATCTATCTT-TGGATTAATTATGCATTGTACGAAGAGATTGAAACTGAAGATGTTGAG 1226
Query 1235 CGTACTCGAGCTGTGTACAGAGAATGCCTCAATCTTATCCCCTCACTCCAAATTCTCTTT 1294
||||| |||| ||| |||||||| ||||| || ||||||||| ||| |||||| |||||
Sbjct 1227 CGTACCCGAGATGTATACAGAGAGTGCCTTAAGCTTATCCCC-CACAGCAAATTTTCTTT 1285
Query 1295 TGCCAAGATATGGTTGCTCGCTGCACAGTTTGAGATCAGGCAATTGAATCTCTCGGGTGC 1354
|||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||||||
Sbjct 1286 TGCCAAAATATGGTTGCTCGCTGCTCAGTTTGAGATAAGGCAATTGAATCTCACGGGTGC 1345
Query 1355 TCGGCGGATACTAGGAAACGCCATTGGCAAAGCTCC-AAAGCATAAGATTTTCAAGAAAT 1413
||| | |||| ||||||| || ||||| |||||||| |||| ||||||| ||||||||||
Sbjct 1346 TCGCCAGATATTAGGAAATGCGATTGGAAAAGCTCCCAAAG-ATAAGATATTCAAGAAAT 1404
Query 1414 ACATTGAGATTGAACTCCACTTGGGAAACATAGATAGATGTAGAAAGCTGTATGCGCGGT 1473
|||||||||| || || || ||||||||||| ||||| ||||||||| | |||| ||||
Sbjct 1405 ACATTGAGATCGAGCTTCAGTTGGGAAACATGGATAGGTGTAGAAAGTTATATGAACGGT 1464
Query 1474 ATCTTGAATGGTCTCCTGAGAGTTGCTATGCTTGGACCAAGTTTGCTGAGTTTGAGAGGT 1533
||||||| ||||||||||||| |||||||||||||| ||||| |||||| || |||||||
Sbjct 1465 ATCTTGAGTGGTCTCCTGAGAATTGCTATGCTTGGAGCAAGTATGCTGAATTAGAGAGGT 1524
Query 1534 CTCTTGCTGAAACAGAACGAGCTAGAGCTATTTTTGAGCTTGCAATATCTCAGCCTGTTC 1593
|||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct 1525 CTCTTGTTGAAACCGAACGAGCTAGAGCTATTTTTGAACTTGCAATATCCCAGCCAGCTC 1584
Query 1594 TTGACACCCCCGAGCTGCTATGG--GGCATACATTGACTTTGAGATATCACTAGGGGAAT 1651
|||||| || |||||||||||| ||| |||||||| |||||||||||| ||||||||
Sbjct 1585 TTGACATGCCTGAGCTGCTATGGAAGGCCTACATTGATTTTGAGATATCAGAAGGGGAAT 1644
Query 1652 TAGAGAGGACACGAGCTTTATATGAGCGACTCTTGGACCGTACAAAGCATTACAAGGTGT 1711
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1645 TAGAGAGGACACGGGCTTTATATGAGCGACTCTTGGACCGTACTAAGCATTACAAGGTGT 1704
Query 1712 GGCTTAGTTTTGCAAAGTTTGAAGCTTCTGCTGC 1745
|| |||| ||||||||||||||||||||||||||
Sbjct 1705 GGGTTAGCTTTGCAAAGTTTGAAGCTTCTGCTGC 1738
> Ahg929053 jgi|Araly1|929053|scaffold_301510.1
Length=2149
Score = 1554 bits (841), Expect = 0.0
Identities = 1397/1661 (84%), Gaps = 55/1661 (3%)
Strand=Plus/Plus
Query 110 AAGAACAAAACCCCTGCTCCGGTTCAAATCACGGCGGAGCAGGTTTTGAA-GGAGG--Cg 166
|||||||| || || || ||||| |||||||| ||||||||| || | || ||||| ||
Sbjct 111 AAGAACAAGACTCCGGCGCCGGTCCAAATCACCGCGGAGCAGATTCT-AAGGGAGGCTCG 169
Query 167 agaga-g-agagagGACAGTCGCATCCTGCGGCCGCCTAAACAGAAG-ATCACAGATTCG 223
||||| | | ||| | | | | || | || |||||||| ||| || ||||| || ||
Sbjct 170 AGAGAGGCA-AGA-GCCTG-AG-AT-C--CGTCCGCCTAATCAG-AGAATCACTGAATC- 220
Query 224 GA-TGAGCTTGCCGAGTACAGACTCCGACGTCGGAAGGAGTTTGAGGACCAGATCCGCGG 282
|| ||||||| |||| | ||||||||||||||||||||| |||||||||||||||||| |
Sbjct 221 GACTGAGCTTTCCGACTTCAGACTCCGACGTCGGAAGGATTTTGAGGACCAGATCCGCCG 280
Query 283 CGCAAAAACGAACT-CACAAGTTTGGGTGAGGTATGCTG-ATTGGGAAGAGTCTCAGAAG 340
|| | | ||| | | ||||||||||| || ||||| | | |||||||| || |||| |
Sbjct 281 TGCGAGATTGAA-TACCCAAGTTTGGGTCAGATATGC-GCAGTGGGAAGAATCGCAGATG 338
Query 341 GATCACGATCGTGCTCGGAGCGTGTGGGAACGAGCTTTGGAA-GACGAGAG-TTACAGGA 398
||| || | |||||||| ||||||||||||||||| || ||| || || || |||| |||
Sbjct 339 GATTACAAGCGTGCTCGAAGCGTGTGGGAACGAGCCTTAGAAGGA-GA-AGCTTACCGGA 396
Query 399 ACCATACGCTCTGGCTCAAATACGCAGAGTTCGAGATGAGGAACAAATCCGTCAACCATG 458
||| ||||||||| |||| | ||| ||||| ||||||| |||||| | |||||| | |
Sbjct 397 GCCACACGCTCTGGGTCAAGTTCGCCGAGTTTGAGATGAAGAACAAGTTTGTCAACGAAG 456
Query 459 CGAGGAACGTTTGGGATCGAGCCGTGAAGATTCTACCTCGCGTGGACCAGTTTTGGTATA 518
||||||||||||||||||| || || | ||| || ||||| || |||||| ||||| |
Sbjct 457 CGAGGAACGTTTGGGATCGTGCTGTTACGATCCTCCCTCGAGTAGACCAGCTTTGGCGCA 516
Query 519 AGTATATTCACATGGAGGAGATACTTGGTAATATCGACGGAGCTAGAAAGATTTTTGAAC 578
| ||||| |||||||| |||| |||||| ||||| | ||||| |||| |||| || || |
Sbjct 517 ATTATATCCACATGGAAGAGAAACTTGGGAATATTGCCGGAGTTAGAGAGATATTCGAGC 576
Query 579 GGTGGATGGATTGGTCACCAGATCAACAAGCTTGGCTCTGTTTTATCAAATTCGAACTTA 638
||||||| ||| ||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 577 GGTGGATCGATCGGTCACCGGATCAACAAGCTTGGCTCTGCTTTATCAAATTCGAACTTA 636
Query 639 GGTATAACGAAATCGAACGGT-CAAGATCGATTTACGAGAGATTTGTGCTTTGCCATCCT 697
|||||| || ||||||| || ||||||| ||||||||||||||||| ||||| |||||
Sbjct 637 AGTATAATGATATCGAAC-GTGCAAGATCCATTTACGAGAGATTTGTTCTTTGTCATCC- 694
Query 698 AAA-GCTTCTTCCTT-TATTCGATACGCAAAGTTTGAGATGAAGAACAGTCAAGTTTCGC 755
||| | ||| | ||| ||||||||| |||||||||||||||||| |||||||| ||
Sbjct 695 AAATGTTTC-TGCTTATATTCGATATGCAAAGTTTGAGATGAAGCGTGGTCAAGTTGAGC 753
Query 756 TTGCGAGGATTGTGTACGAACGCG-CCATTG-A-GATGCTTAAAGACGTCGAAGAAGAAG 812
| || |||| |||| |||||||| ||| | | || |||| ||| ||| |||||||
Sbjct 754 TCGCTAGGAAAGTGTTCGAACGCGCCCA--GAAGGA-GCTTGCAGA---CGATGAAGAAG 807
Query 813 CTGAGATGATCTTTGTGGCCTTTGCTGAGTTTGAAGAACTATGTAAAGAAGTGGAACGGG 872
||||||| |||||||||| |||||||| |||||||||| ||| || ||||| || || |
Sbjct 808 CTGAGATTCTCTTTGTGGCGTTTGCTGAATTTGAAGAACAATGCAAGGAAGTAGAGCGAG 867
Query 873 CTAGGTTTCTTTACAAGTATGCTCTTGATCATATCCCTAAAGGAAGAGCTGAGGATTTGT 932
|||||||| | ||||||| |||||||||||| || ||||||||||||||||| ||||||
Sbjct 868 CTAGGTTTATCTACAAGTTTGCTCTTGATCAGATTCCTAAAGGAAGAGCTGAAAATTTGT 927
Query 933 ACAAG-AAGTTTGTGGCGTTTGAGAAGCAGTATGGGAATAAGGAAGGTATTGATGATGCC 991
|| || |||||||||||||||||||| ||| ||||| |||||||||| ||||| ||||||
Sbjct 928 AC-AGCAAGTTTGTGGCGTTTGAGAAACAGAATGGGGATAAGGAAGGGATTGAGGATGCC 986
Query 992 ATTGTTGGCAGGAGAAAGTTACAGTATGAAGGTGAAGTGAGGAAGAACCCTTTGAACTAC 1051
||| |||| | ||| | ||| |||||||||| ||||||||| |||||||||||||||||
Sbjct 987 ATTATTGGGAAGAGGAGGTTTCAGTATGAAGATGAAGTGAGTAAGAACCCTTTGAACTAT 1046
Query 1052 GATTCTTGGTTCGATTACATTAGCTTAGAGGAGACT-TTGGGGGATAAAGATAGGATCAG 1110
||||| |||||||||||| |||| ||||| |||||| || ||| | ||||||||||| ||
Sbjct 1047 GATTCGTGGTTCGATTACCTTAGGTTAGAAGAGACTGTT-GGGAACAAAGATAGGATAAG 1105
Query 1111 AGAAGTCTATGAGAGGGCTATTGCTAATGTTCCA-CTCGCTGAGGAGAAACGATACTGGC 1169
|||| | ||||||||||||||||||||||||||| || ||| | ||||||||||||||||
Sbjct 1106 AGAAATATATGAGAGGGCTATTGCTAATGTTCCACCT-GCTCAAGAGAAACGATACTGGC 1164
Query 1170 AGAGATATATCTA-CTTGTGGATTGA-TTATGCACTGTTTGAAGAGATTCTAGCTGAAGA 1227
| ||||| || || ||| |||||| | |||||| ||| |||||||||| | |||||||
Sbjct 1165 AAAGATACATATATCTT-TGGATT-AGTTATGCTTTGTATGAAGAGATTGAAACTGAAGA 1222
Query 1228 CGTGGAGCGTACTCGAGCTGTGTACAGAGAATGCCTCAATCTTATCCCCTCACTCCAAAT 1287
||||||||||| |||| ||| ||||||| ||||||||| ||||||||| ||| ||||||
Sbjct 1223 TGTGGAGCGTACCCGAGATGTTTACAGAGCATGCCTCAAGCTTATCCCC-CACACCAAAT 1281
Query 1288 TCTCTTTTGCCAAGATATGGTTGCTCGCTGCACAGTTTGAGATCAGGCAATTGAATCTCT 1347
| ||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||
Sbjct 1282 TTTCTTTTGCCAAAATATGGTTGCTCGCTGCACAACATGAAATCAGGCAATTAAATCTCA 1341
Query 1348 CGGGTGCTCGGCGGATACTAGGAAACGCCATTGGCAAAGCTCC-AAAGCATAAGATTTTC 1406
||||||| || | |||| ||||||| || ||||| |||||||| |||| | ||||| |||
Sbjct 1342 CGGGTGCACGACAGATATTAGGAAATGCGATTGGGAAAGCTCCAAAAG-AGAAGATATTC 1400
Query 1407 AAGAAATACATTGAGATTGAACTCCACTTGGGAAACATAGATAGATGTAGAAAGCTGTAT 1466
||||||||||||||||| |||||||| |||||||| |||||||||||||||||| | ||
Sbjct 1401 AAGAAATACATTGAGATCGAACTCCAGTTGGGAAATATAGATAGATGTAGAAAGTTATAC 1460
Query 1467 GCGCGGTATCTTGAATGGTCTCCTGAGAGTTGCTATGCTTGGACCAAGTTTGCTGAGTTT 1526
| |||||||||||||||||||||||||| |||||||||||||| || | ||||||||||
Sbjct 1461 GAGCGGTATCTTGAATGGTCTCCTGAGAATTGCTATGCTTGGAGAAACTATGCTGAGTTT 1520
Query 1527 GAGAGGTCTCTTGCTGAAACAGAACGAGCTAGAGCTATTTTTGAGCTTGCAATATCTCAG 1586
|| | ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1521 GAAATGTCTCTTGCTGAAACAGAACGAGCTAGAGCTATCTTTGAACTTGCAATATCTCAG 1580
Query 1587 CCTGTTCTTGACACCCCCGAGCTGCTATGGG-G-CATACATTGACTTTGAGATATCACTA 1644
|||| ||| |||| ||||||||||||||| | | |||||||| |||||||||||| |
Sbjct 1581 CCTGCTCTAGACATGCCCGAGCTGCTATGGAAGACGTACATTGATTTTGAGATATCAGAA 1640
Query 1645 GGGGAATTAGAGAGGACACGAGCTTTATATGAGCGACTCTTGGACCGTACAAAGCATTAC 1704
|||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||| |
Sbjct 1641 GGGGAATTAGAGAGGACACGGGCTTTATATGAGAGACTCTTGGACCGTACAAAACATTGC 1700
Query 1705 AAGGTGTGGCTTAGTTTTGCAAAGTTTGAAGCTTCTGCTGC 1745
||||||||| |||| ||||||||||||||||||||||||||
Sbjct 1701 AAGGTGTGGGTTAGCTTTGCAAAGTTTGAAGCTTCTGCTGC 1741
Score = 231 bits (125), Expect = 1e-59
Identities = 247/303 (82%), Gaps = 19/303 (6%)
Strand=Plus/Plus
Query 1775 CCAGAGCAG-TTTTCGATAGAGCCAACACATACTACAAAGAGTCGAAAC-CG-GAGCTCA 1831
||||||| | | ||||||||||||||||||||||||||||| | |||| | ||||| |
Sbjct 1807 CCAGAGC-GATCTTCGATAGAGCCAACACATACTACAAAGA--CAAAACACCAGAGCTGA 1863
Query 1832 AGGAAGAACGAGCTAACCTGTTGGAAGATTGGCTGAACATGGAGGCTAGCTTTGGT--G- 1888
| |||| || |||| || ||||| |||||||| ||||||||| | |||||||| |
Sbjct 1864 AAAAAGAGCGTGCTATGCTTTTGGAGGATTGGCTTAACATGGAGACGGGCTTTGGTATGC 1923
Query 1889 ------ATGTTAGTG-CTGTTCAATCGAAGCTCCCCAAGAAGCTCAAGAAGAGAATGCCA 1941
||||||||| | ||||||||||| ||||| ||||||||||||||||||| ||
Sbjct 1924 TCGGGGATGTTAGTGTC-GTTCAATCGAAACTCCCGAAGAAGCTCAAGAAGAGAAAGCTG 1982
Query 1942 ATCACTAGAGAAGACGG-TGAGACAGAGTATGAAGAGTACATTGATTACTTCTTCCCTGA 2000
| || ||||||||| || | || ||||||||||| | ||||||||| || || || ||
Sbjct 1983 AGCAGTAGAGAAGATGGCTCT-ACCGAGTATGAAGAATTCATTGATTATTTGTTTCCAGA 2041
Query 2001 AGAATCACAGACGATGAATCTCAAGATTCTTGAAGCTGCTCATAAATGGAAGAAGCAGAA 2060
|||||||||||||| |||||| |||||| ||||||||||| |||||||||||||||||||
Sbjct 2042 AGAATCACAGACGACGAATCTTAAGATTGTTGAAGCTGCTTATAAATGGAAGAAGCAGAA 2101
Query 2061 GGT 2063
|||
Sbjct 2102 GGT 2104
> Ahg330810 jgi|Araly1|330810|fgenesh1_pm.C_scaffold_8000153
Length=2064
Score = 1522 bits (824), Expect = 0.0
Identities = 1397/1668 (84%), Gaps = 61/1668 (4%)
Strand=Plus/Plus
Query 106 GGTTAAGAACAAAACCCCTGCTCCGGTTCAAATCACGGCGGAGCAGGTTTTGAAG-GAGG 164
||| |||||||| || || || ||||| |||||||| || |||||| || | ||| || |
Sbjct 45 GGTCAAGAACAAGACTCCGGCCCCGGTGCAAATCACCGCAGAGCAGATTCT-AAGAGAAG 103
Query 165 Cgagagaga-g--agagGACAGTCGCATCCTGCGGCCGCCTAAACAGAAGATCACAGATT 221
| ||||||| | ||||| | | | || | || | ||||| ||||| ||||| ||||
Sbjct 104 CTAGAGAGAGGCAAGAGG-CTG-AG-AT-C--CGTACACCTAAGCAGAAAATCACTGATT 157
Query 222 CGGA-TGAGCTTGCCGAGTACAGACTCCGACGTCGGAAGGAGTTTGAGGACCAGATCCG- 279
| | ||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 158 C-TACTGAGCTTTCCGATTACAGACTCCGACGTCGGAAGGAGTTTGAGGACCAGATCCGT 216
Query 280 CGGCGCAAAAACGAAC-TCACAAGTTTGGGTGAGGTATGCTG-ATTGGGAAGAGTCTCAG 337
| | || | | |||| || ||||||||||| | |||||| | | ||||||||||| ||
Sbjct 217 C-GAGCGAGATGGAACATC-CAAGTTTGGGTCAAGTATGC-GCAGTGGGAAGAGTCGCA- 272
Query 338 AA-GGATCACGATCGTGCTCGGAGCGTGTGGGAACGAGCTTTGGAAGACGAGAGTTACAG 396
|| |||| ||| ||||||||||||||||||||||||||||| |||| |||| ||||||
Sbjct 273 AATGGATTACGCGCGTGCTCGGAGCGTGTGGGAACGAGCTTTAGAAG--GAGA-TTACAG 329
Query 397 GAACCATACGCTCTGGCTCAAATACGCAGAGTTCGAGATGAGGAACAAATCCGTCAACCA 456
|||||||||||| ||| |||| ||||||||||| ||||||| |||||| | |||||| |
Sbjct 330 GAACCATACGCTTTGGGTCAAGTACGCAGAGTTTGAGATGAAGAACAAGTTTGTCAACAA 389
Query 457 TGCGAGGAACGTTTGGGATCGAGCCGTGAAGATTCTACCTCGCGTGGACCAGTTTTGGTA 516
||| ||||||||||||||||| | || | | |||| ||||| || |||||| |||||||
Sbjct 390 TGCAAGGAACGTTTGGGATCGCTCTGTTACGCTTCTCCCTCGAGTAGACCAGCTTTGGTA 449
Query 517 TAAGTATA-TTCACATGGAGGAGATACTTGGTAATATCGACGGAGCTAGAAAGATTTTTG 575
||||||| || |||||||||||| |||||| ||||||| |||||||||| |||| || |
Sbjct 450 CAAGTATAGTT-ACATGGAGGAGAAACTTGGGAATATCGCCGGAGCTAGACAGATCTTCG 508
Query 576 AACGGTGGATGGATTGGTCACCAGATCAACAAGCTTGGCTCTGTTTTATCAAATTCGAAC 635
| ||||||||| ||||||| || |||||| |||||||| | |||||||| ||||||||||
Sbjct 509 AGCGGTGGATGAATTGGTCGCCGGATCAAAAAGCTTGGTTTTGTTTTATTAAATTCGAAC 568
Query 636 TTAGGTATAACGAAATCGAACGGT-CAAGATCGATTTACGAGAGATTTGTGCTTTGCCAT 694
||| ||||||||||||||||| || | |||||||| |||||||| ||||| ||||| |||
Sbjct 569 TTAAGTATAACGAAATCGAAC-GTGCGAGATCGATATACGAGAGGTTTGTTCTTTGTCAT 627
Query 695 CCTAAAGCT-TCTTCCTTTATTCGATACGCAAAGTTTGAGATGAA--G-AACAGTCAAGT 750
|| |||| | ||| | ||||||||||| ||||||||||||||||| | |||||||
Sbjct 628 CCGAAAG-TATCTGCTTTTATTCGATATGCAAAGTTTGAGATGAAGCGTGGTGGTCAAGT 686
Query 751 TTCGCTTGCGA-GGATTGTGTACGAA-CGCGCCATTGA-GATGCTT-AAAGACGTCGAAG 806
| |||||| | ||| || ||| || || ||| || || |||| || | ||| |
Sbjct 687 TAAGCTTGCTAGGGA-GGTTTAC-AATCGGGCCGCGGACGA-GCTTGCAA-A---CGACG 739
Query 807 AAGAAGCTGAGATGATCTTTGTGGCCTTTGCTGAGTTTGAAGAACTATGTAAAGAAGTGG 866
||||||||||||| ||||||| || |||||||| || ||||| | ||| || ||||| |
Sbjct 740 AAGAAGCTGAGATTCTCTTTGTAGCGTTTGCTGAATTCGAAGAGCGATGCAAGGAAGTAG 799
Query 867 AACGGGCTAGGTTTCTTTACAAGTATGCTCTTGATCATATCCCTAAAGGAAGAGCTGAGG 926
| |||||||||||| | ||||||| ||||||||||| ||| |||||||||||||||||||
Sbjct 800 AGCGGGCTAGGTTTATCTACAAGTTTGCTCTTGATCGTATTCCTAAAGGAAGAGCTGAGG 859
Query 927 ATTTGTACAAGAAGTTTGTGGCGTTTGAGAAGCAGTATGG-GAATAAGGAAGGTATTGAT 985
||||||||||||||||| ||||||||||||| |||||||| || ||| |||||||||||
Sbjct 860 ATTTGTACAAGAAGTTTTTGGCGTTTGAGAAACAGTATGGTGA-TAATGAAGGTATTGAG 918
Query 986 GATGCCATTGTTGGCAGGAGAA-AG-TTACAGTATGAAGGTGAAGTGAGGAAGAACCCTT 1043
||||| |||||||| | |||| || || |||||||||| ||||||||| || |||||||
Sbjct 919 GATGCTATTGTTGGGA--AGAAGAGCTTTCAGTATGAAGATGAAGTGAGTAAAAACCCTT 976
Query 1044 TGAACTACGATTCTTGGTTCGATTACATTAGCTTAGAGGAGACTTTGGGGGATAAAGATA 1103
||||||| || || ||||||||||| |||| || || |||| | | ||| | |||||||
Sbjct 977 TGAACTATGACTCGTGGTTCGATTATGTTAGGTTGGAAGAGAGTGTAGGGAACAAAGATA 1036
Query 1104 GGATCAGAGAAGTCTATGAGAGGGCTATTGCTAATGTTCCAC-TCGCTGAGGAGAAACGA 1162
||||||||||| |||||||||||||||||||||||||||||| | || | |||||||||
Sbjct 1037 GGATCAGAGAAATCTATGAGAGGGCTATTGCTAATGTTCCACCT-GCCCAAGAGAAACGA 1095
Query 1163 TACTGGCAGAGATATATCTA-CTTGTGGATTGATTATGCACTGTTTGAAGAGATTCTAGC 1221
| |||||| ||||| || || ||| |||||| ||||||| ||| |||||||||| | |
Sbjct 1096 TTCTGGCAAAGATACATTTATCTT-TGGATTAATTATGCTTTGTATGAAGAGATTGAAAC 1154
Query 1222 TGAAGACGTGGAGCGTACTCGAGCTGTGTACAGAGAATGCCTCAATCTTATCCCCTCACT 1281
| |||| ||| ||||||| |||| ||| ||||||||||||||||| |||||||| |||
Sbjct 1155 TAAAGATGTGAAGCGTACACGAGATGTTTACAGAGAATGCCTCAAGCTTATCCCA-CACA 1213
Query 1282 CCAAATTCTCTTTTGCCAAGATATGGTTGCTCGCTGCACAGTTTGAGATCAGGCAATTGA 1341
||||||| ||||||||||| ||||||||||| |||||| | | ||| |||||||||||||
Sbjct 1214 CCAAATTTTCTTTTGCCAAAATATGGTTGCTGGCTGCAGAATATGAAATCAGGCAATTGA 1273
Query 1342 ATCTCT-CGGGTGCTCGGCGGATACTAGGAAACGCCATTGGCAAAGCTCCAAA-GCATAA 1399
|||| | |||| | ||| || ||||||| || ||||| ||||||||||| | ||||
Sbjct 1274 ATCT-TACGGGCACACGGAAAATTTTAGGAAATGCGATTGGGAAAGCTCCAAAAG-ATAA 1331
Query 1400 GATTTTCAAGAAATACATTGAGATTGAACTCCACTTGGGAAACATAGATAGATGTAGAAA 1459
||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 1332 GATATTCAAGAAATACATTGAGATTGAACTCCAGTTGGGAAACATCGATAGATGTAGAAA 1391
Query 1460 GCTGTATGCGCGGTATCTTGAATGGTCTCCTGAGAGTTGCTATGCTTGGACCAAGTTTGC 1519
| || | ||||| |||||||||||||||||||| |||||||||||||| || | |||
Sbjct 1392 ATTATACGAGCGGTTTCTTGAATGGTCTCCTGAGAATTGCTATGCTTGGAGAAACTATGC 1451
Query 1520 TGAGTTTGAGAGGTCTCTTGCTGAAACAGAACGAGCTAGAGCTATTTTTGAGCTTGCAAT 1579
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1452 TGAGTTTGAGATTTCTCTTGCTGAAACAGAACGAGCTAGAGCTATCTTTGAGCTTGCAAT 1511
Query 1580 ATCTCAGCCTGTTCTTGACACCCCCGAGCTGCTATGGG-G-CATACATTGACTTTGAGAT 1637
||||||||||| ||| |||| || |||||||| ||| | | |||||||| ||||||||
Sbjct 1512 ATCTCAGCCTGCTCTAGACATGCCTGAGCTGCTTTGGAAGACGTACATTGATTTTGAGAT 1571
Query 1638 ATCACTAGGGGAATTAGAGAGGACACGAGCTTTATATGAGCGACTCTTGGACCGTACAAA 1697
||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1572 ATCGCAAGGGGAATTAGAGAGGACACGGGCTTTATATGAGCGACTCTTGGACCGTACAAA 1631
Query 1698 GCATTACAAGGTGTGGCTTAGTTTTGCAAAGTTTGAAGCTTCTGCTGC 1745
||||| |||||||||| |||| ||||||||||||||||||||||||||
Sbjct 1632 GCATTGCAAGGTGTGGGTTAGCTTTGCAAAGTTTGAAGCTTCTGCTGC 1679
Score = 270 bits (146), Expect = 3e-71
Identities = 249/296 (84%), Gaps = 17/296 (6%)
Strand=Plus/Plus
Query 1774 GCCAGAGCAG-TTTTCGATAGAGCCAACACATACTACAAAGAGTCGAAACCGGAGCTCAA 1832
|||||||| | | ||||||||||||||||||||||||||||| || | ||| ||||| ||
Sbjct 1750 GCCAGAGC-GATCTTCGATAGAGCCAACACATACTACAAAGACTCCACACCAGAGCTGAA 1808
Query 1833 GGAAGAACGAGCTAAC-CTGTTGGAAGATTGGCTGAACATGGAGGCTAG-CTTTGGTGA- 1889
||||| || |||| | || ||||| |||||||| ||||||||| | || |||||||||
Sbjct 1809 AGAAGAGCGTGCTA-CGCTTTTGGAGGATTGGCTTAACATGGAGAC-AGGCTTTGGTGAG 1866
Query 1890 -T-G----T-T-AGTG-CTGTTCAATCGAAGCTCCCCAAGAAGCTCAAGAAGAGAATGCC 1940
| | | | |||| | ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1867 CTCGGGCATGTTAGTGTC-GTTCAATCGAAGCTCCCGAAGAAGCTCAAGAAGAGAAAGCT 1925
Query 1941 AATCACTAGAGAAGACGGTGAGACAGAGTATGAAGAGTACATTGATTACTTCTTCCCTGA 2000
|| || ||||||||||| | |||||||||||||| ||||||||||| || || || ||
Sbjct 1926 AACCAGTAGAGAAGACGTTTCTACAGAGTATGAAGAATACATTGATTATTTGTTTCCGGA 1985
Query 2001 AGAATCACAGACGATGAATCTCAAGATTCTTGAAGCTGCTCATAAATGGAAGAAGC 2056
|||||||||||||| |||||| |||||||||||||||||| |||||||||||||||
Sbjct 1986 AGAATCACAGACGACGAATCTTAAGATTCTTGAAGCTGCTTATAAATGGAAGAAGC 2041
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83684268265
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5