BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G51770.2
Length=3802
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485532 jgi|Araly1|485532|fgenesh2_kg.5__1524__AT3G51770.2 5363 0.0
> Ahg485532 jgi|Araly1|485532|fgenesh2_kg.5__1524__AT3G51770.2
Length=3693
Score = 5363 bits (2904), Expect = 0.0
Identities = 3523/3801 (93%), Gaps = 126/3801 (3%)
Strand=Plus/Plus
Query 12 CATGACTTCTCTCTGAAAAACAGATTGGTAATaaaaaagaaaaagaaaaacaataaacga 71
||||||||||||||| |||||||||| |||| |||||| ||||| |||||||||||||
Sbjct 1 CATGACTTCTCTCTG-AAAACAGATTCGTAA-AAAAAA-AAAAAAAAAAACAATAAAC-- 55
Query 72 aaactgagagagagattgaaagagagaTCGAGCGGAGGAAGATTCTTCCTCCAATTACCA 131
| | | | | || |||||||||||||||||||||||||||||||||||||||
Sbjct 56 ---C----A-A-A-ACTG--AGAGAGATCGAGCGGAGGAAGATTCTTCCTCCAATTACC- 102
Query 132 TCTCTCTATTTTTACGGGA-AGATTCGTAAAATTAGTGCCATCAACCCaaaaaaaaaaaC 190
||||||||||||||| ||| |||||||||||||||||| |||| | ||||||||||
Sbjct 103 TCTCTCTATTTTTAC-GGATAGATTCGTAAAATTAGTG---TCAA--C--AAAAAAAAAC 154
Query 191 GAACCGGATCGATGAAACTTACAGTGCAAAAACACCATTTCCGagaagaagaagaagacg 250
||||||||||||||||||||||| ||||||||||| |||||| | ||||||||||||||
Sbjct 155 GAACCGGATCGATGAAACTTACACTGCAAAAACACGATTTCC--G-AGAAGAAGAAGACG 211
Query 251 aagaacaagaCCTTCGTTGAGAAACTTTATTTGaaaaaaaaaaGAAACGATTTTTATTGG 310
||||| |||| |||||||||| | || ||| | | | ||| |||
Sbjct 212 AAGAAGAAGAGCTTCGTTGAG-GA--TT-TTT--------ATTG----G---TTT-TTGA 251
Query 311 TTAAAGGGAC---AG-ACC-TCCTTTTGGTGGATTGGCTCCGTGATCCAATCCTCGGAAT 365
|||||||| | || ||| | ||| |||||||||||||||||||||||||||||||
Sbjct 252 TTAAAGGGTCTGAAGCACCGGAC-TTT--TGGATTGGCTCCGTGATCCAATCCTCGGAAT 308
Query 366 TGTTTTTAAGATGCAGCATAATCTCTTCACAACAATGCGAAGTTTGAAGCTTGCTGAAGG 425
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 309 TGTTTTAAAGATGCAGCATAATCTCTTCACAACAATGCGAAGTTTGAAGCTTGCAGAAGG 368
Query 426 TTGTAAAGGTACACAAGTTTACGCTCTTAACCCATCAGCTCCTACTCCGCCTCCTCCTCC 485
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 369 TTGTAAAGGTACACAAGTTTACGCTCTTAACCCATCCGCTCCTCCTCCGCCTCCTCCTCC 428
Query 486 TGGTAATAGCAGCAGCggtggtggtggtggtggtggtAGCGGCGGTGGCACCGGAGGTGT 545
|||||||||| | || ||||||||||||| |||||||||||||||| ||
Sbjct 429 TGGTAATAGC-G--GC---------GGTGGTGGTGGTA---GCGGTGGCACCGGAGGAGT 473
Query 546 TGGGGATAAGCTTTTACAACATCTTTCAGATCATCTTCGTGTTAATTCTGTCCGATCTAA 605
|||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 474 TGGGGATAAGCTCTTACAACACCTTTCAGATCATCTTCGTGTTAATTCAGTCCGATCTAA 533
Query 606 ATCAAGCCGGACTTATCCTCCTCC-T--ACTCAACCAAACGCTGTCGTTTCTCCCGAGTT 662
|||||||||||||||||||||||| | | |||| |||||||||| ||||||||||||||
Sbjct 534 ATCAAGCCGGACTTATCCTCCTCCTTCGAATCAAGCAAACGCTGTTGTTTCTCCCGAGTT 593
Query 663 TCTTCTCCCTTGTGGACTTCCTGTTACGGATCTGCTTGAACCTCAAATCGATCCTTGCTT 722
|||||| || |||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 594 TCTTCTTCCGTGTGGACTTCCTGTGACGGATCTGCTTGAACCTCAAATCGATCCTTGTTT 653
Query 723 GAAATTCGTTGATTTGGTTGAGAAGATGGCTCAAGTTTATCGTAGGATTGAGAATTGTTC 782
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct 654 GAAATTCGTTGATTTGGTTGAGAAGATGGCTGAAGTTTATCGGAGGATTGAGAATTGTTC 713
Query 783 TCAGTTTGAGAAATCTGGGGCTTATTTAGAGCAATGCGCTATCTTCCGGGGCATTTCTGA 842
|| || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 714 CCAATTCGAGAAATCTGGGGCTTATTTAGAGCAATGCGCTATATTCCGGGGAATTTCTGA 773
Query 843 TCCGAAACTGTTCCGGCGGAGTCTCCGGTCGTCTAGGCAACATGCGGTGGATGTTCACGC 902
||||||||| ||||||||||||||||| |||||||||||||| || || || ||||||||
Sbjct 774 TCCGAAACTTTTCCGGCGGAGTCTCCGATCGTCTAGGCAACACGCTGTTGAAGTTCACGC 833
Query 903 GAAAGTCGTGTTAGCCTCGTGGCTTAGGTTCGAGAGGAGGGAGGATGAGTTGATTGGAAC 962
|||||||||| | || ||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 834 GAAAGTCGTGCTGGCGTCGTGGCTTCGATTCGAGAGGAGGGAGGATGAGTTGATTGGAAC 893
Query 963 GACTTCTATGGATTGTTGTGGCAGGAATTTGGAATGTCCAAAGGCTACTCTTGTTTCTGG 1022
|||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||
Sbjct 894 AACTTCTATGGATTGTTGTGGGAGGAATTTGGAATGTCCAAAGGCGACTCTTGTTTCAGG 953
Query 1023 TTATGATCCTGAATCTGTTTATGATCCATGTGTTTGCTCTGGAGCTTCTAGATCAGAGAT 1082
||||| || |||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 954 GTATGAGCCGGAATCTGTATATGATCCATGTGTTTGCTCTGGAGCTTCTAGATCACAGAT 1013
Query 1083 GATGAATGAAGATGAATGTTCTACTTCTCAAGAAGTAGACTATGATATGTCATTTTGTAT 1142
|||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||
Sbjct 1014 GATGAATGAAGATGAATGTTCTACTTCTGAGGAAGTAGACTATGATATGTCCTTTTGTAT 1073
Query 1143 TGGTGATGAAGAGGTTCGTTGTGTGAGGTACAAAATCGCGTCTTTGTCCAGACCTTTCAA 1202
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1074 TGGCGATGAAGAGGTTCGTTGTGTGAGGTACAAAATCGCGTCTTTGTCGAGACCTTTCAA 1133
Query 1203 GGCGATGTTATACGGTGGGTTTAGAGAAATGAAACGAGCCACGATCAATTTTACGCAGAA 1262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1134 GGCGATGTTATACGGTGGGTTTAGAGAAATGAAACGAGCCACGATCAATTTTACGCAGAA 1193
Query 1263 TGGAATCTCTGTTGAAGGGATGAGAGCTGCAGAGATTTTCAGCAGGACCAACAGGTTAGA 1322
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1194 CGGAATCTCTGTTGAAGGGATGAGAGCTGCAGAGATTTTCAGCAGGACCAACAGGTTAGA 1253
Query 1323 TAACTTCCCTCCTAATGTTGTCTTGGAGCTTCTTAAGCTTGCAAATCGGTTCTGCTGCGA 1382
||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct 1254 TAACTTCCCTCCTAATGTTGTCTTGGAGCTTCTTAAGCTGGCGAATCGGTTCTGTTGCGA 1313
Query 1383 TGAATTGAAATCCGCTTGTGATTCGCATTTGGCACATCTTGTTAATTCTCTGGATGAGGC 1442
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 TGAATTGAAATCCGCTTGCGATTCGCATTTGGCACATCTTGTTAATTCTCTGGATGAGGC 1373
Query 1443 AATGTTGTTGATTGAGTACGGATTAGAAGAGGCTGCGTATCTTCTGGTGGCAGCTTGTCT 1502
|||||||||||| ||||| |||||||| |||||||| || ||||||||||||||||||||
Sbjct 1374 AATGTTGTTGATCGAGTATGGATTAGAGGAGGCTGCATACCTTCTGGTGGCAGCTTGTCT 1433
Query 1503 TCAGGTTTTTCTCAGGGAATTGCCTAGCTCTATGCATAATCCGAATGTTATAAAGATT-T 1561
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||| || |
Sbjct 1434 TCAGGTTTTTCTTAGGGAATTGCCGAGCTCTATGCATAATCCGAATGTTATAAAG-TTCT 1492
Query 1562 TCTGCAGCGCCGAGGGACGGGAAAGACTGGCGTCTCTTGGCCATGCTTCTTTTACATTGT 1621
|||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1493 TCTGTAGTGCCGAGGGACGGGAAAGACTGGCATCTCTTGGCCATGCTTCTTTTACATTGT 1552
Query 1622 ACTTCTTCTTGAGCCAGATTGCGATGGAAGATGATATGAAATCTAACACAACTGTGATGC 1681
|||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 1553 ACTTCTTCTTAAGCCAGATTGCCATGGAAGATGATATGAAATCTAACACTACTGTGATGC 1612
Query 1682 TCTTAGAACGTCTGGTTGAATGTGCGGTGGATAGTTGGGAGAAACAGCTTGCGTATCACC 1741
||||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1613 TCTTAGAGCGTTTGGTTGAATGCGCGGTGGATAATTGGGAGAAACAGCTTGCGTATCACC 1672
Query 1742 AATTAGGAGTGGTGATGCTAGAGAGAAAAGAATATAAGGATGCTCAGAGATGGTTTAACG 1801
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1673 AATTAGGAGTGGTGATGCTGGAGAGAAAAGAATATAAGGATGCTCAGAGATGGTTTAACG 1732
Query 1802 CAGCGGTTGAGGCTGGCCATCTTTACTCTCTCGTGGGTGTTGCCAGGACTAAGTTTAAGC 1861
|||| ||||||||||| ||||||||||| |||||||| ||||| ||| ||||||| ||||
Sbjct 1733 CAGCAGTTGAGGCTGGTCATCTTTACTCCCTCGTGGGCGTTGCTAGGTCTAAGTTCAAGC 1792
Query 1862 GTGACCACAGGTACTCGGCTTATAAGATCATCAATTC-CTTGATTTCGGATCACAAGGCT 1920
||||||| |||||||||||||||||||||||||| || | ||||||||||||| || |||
Sbjct 1793 GTGACCATAGGTACTCGGCTTATAAGATCATCAACTCAC-TGATTTCGGATCATAAAGCT 1851
Query 1921 ACTGGGTGGATGCACCAGGAAAGGTCCTTGTATTGCAGTGGTAAAGAAAAGCTGCTTGAT 1980
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1852 ACTGGGTGGATGCACCAGGAGAGGTCCTTGTATTGCAGTGGTAAAGAAAAGCTGCTCGAT 1911
Query 1981 TTGGATACAGCTACCGAGTTTGACCCTACTTTGACATTCCCCTACAAGTTCAGGGCAGTG 2040
|||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||
Sbjct 1912 TTGGATACAGCTACCGAGTTAGACCCGACTTTGACATTCCCCTACAAATTCAGGGCAGTG 1971
Query 2041 GCTTTGGTGGAAGAAAACCAGTTTGGAGCTGCAATCGCAGAACTGAACAAGATTCTTGGA 2100
|| ||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1972 GCATTGGTTGAAGAGAACCAGTTTGGAGCTGCGATCGCGGAACTGAACAAGATTCTTGGA 2031
Query 2101 TTCAAGGCCTCTCCTGACTGTCTAGAGATGAGGGCATGGATTTCTATAGGTATGGAGGAT 2160
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2032 TTCAAGGCCTCTCCTGACTGTCTGGAGATGAGGGCATGGATTTCTATAGGTATGGAGGAT 2091
Query 2161 TACGAGGGTGCTTTGAAAGATATTCGGGCGCTTTTGACATTGGAGCCAAATTTTATGATG 2220
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2092 TACGAGGGTGCTCTGAAAGATATTCGGGCGCTTTTGACATTGGAGCCGAATTTTATGATG 2151
Query 2221 TTTAACTGGAAAATCCATGGTGATCATATGGTGGAGTTGCTCCGTCCGCTAGCCCAGCAG 2280
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2152 TTTAACTGGAAAATCCATGGTGATCATATGGTGGAGCTGCTCCGTCCGCTAGCCCAGCAG 2211
Query 2281 TGGAGCCAGGCTGATTGCTGGATGCAGCTGTATGATCGTTGGTCTTCTGTGGATGATATT 2340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2212 TGGAGCCAGGCTGATTGCTGGATGCAGCTGTATGATCGTTGGTCTTCTGTGGATGATATT 2271
Query 2341 GGATCTCTAGCAGTTGTTCATCATATGCTTGCAAATGATCCAGGGAAGAGTCTTTTACGG 2400
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2272 GGTTCTCTAGCAGTTGTTCATCATATGCTTGCAAATGATCCAGGGAAGAGTCTTTTACGA 2331
Query 2401 TTCAGACAGTCTCTTCTTCTCCTACGGCTCAATTGTCAAAAGGCAGCAATGCGTAGTCTA 2460
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 2332 TTCAGACAGTCTCTTCTTCTGCTACGGCTAAATTGTCAAAAGGCAGCAATGCGTAGTCTA 2391
Query 2461 AGGCTGGCTCGAAACCATTCAAAGTCGGAGCATGAGAGACTTGTGTATGAAGGATGGATA 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2392 AGGCTGGCTCGAAACCATTCAAAGTCGGAGCATGAGAGACTTGTGTATGAAGGTTGGATA 2451
Query 2521 CTGTATGATACAGGCCACCGCGAGGAAGCCCTTGCCAAAGCGGAGGAATCCATTTCCATC 2580
|||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2452 CTGTATGATACAGGTCACCGCGAGGAAGCCCTTGCCAAAGCCGAGGAGTCCATTTCCATA 2511
Query 2581 CAAAGGTCGTTTGAAGCGTTTTTCCTCAAAGCTTACGCCCTTGCAGACTCTACGCTTGAC 2640
|| || || |||||||||||||| ||||||||||| |||||||| ||||| |||||||||
Sbjct 2512 CAGAGATCTTTTGAAGCGTTTTTTCTCAAAGCTTATGCCCTTGCGGACTCCACGCTTGAC 2571
Query 2641 CCGGACTCCTCTAATTATGTGATTCAGCTCCTTCAAGAAGCGCTTAAGTGCCCCTCAGAT 2700
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2572 CCGGACTCCTCAAATTATGTGATTCAGCTCCTTCAAGAAGCGCTTAAGTGCCCCTCAGAT 2631
Query 2701 GGTCTCCGTAAGGGACAAGCATTGAACAACCTGGGGAGCGTATACGTGGATTGTGAAAAG 2760
|||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct 2632 GGTCTCCGTAAGGGACAAGCTTTGAACAACCTGGGGAGTGTATATGTGGATTGTGAAAAG 2691
Query 2761 CTGGATCTTGCAGCTGATTGCTACACAAACGCGCTCACCATCAAGCATACACGAGCTCAC 2820
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2692 CTGGATCTTGCAGCTGATTGCTACACAAACGCTCTCACCATCAAGCATACACGAGCTCAC 2751
Query 2821 CAAGGTCTTGCACGTGTTTATCACCTGAAAAACCAACGGAAAGCTG-CTTATGATGAAAT 2879
|||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||
Sbjct 2752 CAAGGTCTTGCACGTGTTTATCACCTTAAAAACCAACGGAAAGCTGCCTT-TGATGAAAT 2810
Query 2880 GACAAAGCTAATAGAGAAGGCTCAGAACAATGCGTCGGCATATGAGAAGCGCTCTGAATA 2939
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2811 GACAAAGCTAATAGAGAAGGCTCAGAACAATGCTTCGGCATATGAGAAGCGCTCTGAATA 2870
Query 2940 TTGTGACCGCGAGATGGCTCAGAGCGACCTTTGCCTGGCAACACAACTTGACCCTCTCCG 2999
|||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
Sbjct 2871 TTGTGACCGCGAGATGGCACAGAGCGACCTTAGCCTGGCAACACAACTTGACCCTCTCAG 2930
Query 3000 AACCTATCCTTACAGATACAGAGCCGCAGTTCTTATGGACGACCACAAAGAAAGTGAAGC 3059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2931 AACCTATCCTTACAGATACAGAGCCGCAGTTCTTATGGACGACCACAAAGAAAGTGAAGC 2990
Query 3060 CATAGACGAGCTTTCGAGGGCGATATCATTTAAACCAGATCTTCAGCTATTACATCTACG 3119
||||||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct 2991 CATAGACGAGCTTTCAAGGGCGATATCTTTTAAACCAGATCTCCAGCTGTTACATCTACG 3050
Query 3120 AGCAGCATTCTATGATTCAATGGGAGAAGGAGC-GTCTGCTATAAAAGATTGTGAAGCAG 3178
||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||
Sbjct 3051 AGCAGCATTCTATGATTCAATGGGAGAAGGAGCAG-CTGCTATCAAAGATTGTGAAGCAG 3109
Query 3179 CATTATGTATTGATCCAGGTCATGCAGATACACTCGAGCTCTACCACAAAGCTCGTGAAC 3238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3110 CATTATGTATTGATCCAGGTCATGCAGATACACTCGAGCTCTACCACAAAGCTCGTGAAC 3169
Query 3239 CAAACGACCAAAAGTAGAACAAAACTATCAATTTGGTTTGATGGGCAAAAATATTTCTCT 3298
||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||
Sbjct 3170 CAAACGACCAAAAGTAGAACAAAACTATCGTTTTGGTTTGATGGGCAAAA-TCTTTCTCT 3228
Query 3299 TCTTCCCTCCTGGTATGGCTTCTACACTGTTTCATTTTCCTTGTGCAAAACAGAA-CTTG 3357
||||||||||||||||| |||||||||||||||||||||||| |||||||||||| | |
Sbjct 3229 TCTTCCCTCCTGGTATG-CTTCTACACTGTTTCATTTTCCTTCTGCAAAACAGAAACC-G 3286
Query 3358 GAGCAAATCAAAGAAAGCTTGGTTTGAGTGAACCAGGGAAAAAGCAAGCATAGCCATGTA 3417
||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3287 -AGCAA-TCAAACAAGGCTTGGTTTGAGTGAACCAGGGAAAAAGCAAGCATAGCCATGTA 3344
Query 3418 AATAGAAACttttttatatattatttttttttCTCTATAATTTTGGTTATTGGGGGGTGA 3477
|||||||||||||| |||||| || |||||| ||||||||||||||||||||||||| |
Sbjct 3345 AATAGAAACTTTTT-ATATAT-ATATTTTTT-CTCTATAATTTTGGTTATTGGGGGG--A 3399
Query 3478 GAGGATACTTTATAAGTAGTGCAGAGAGTGTTTCTTGCTGCTAAAGATA-A-TACGTTTT 3535
| || || | ||||||||||||||||||||| |||||| | ||||||||
Sbjct 3400 G----TA--------GT-G--CAGAGAGTGTTTCTTGCTGCTTAAGATATAATACGTTTT 3444
Query 3536 CTGGCCAACaaaaaaaaGGGAA-AA-CCACGAAGAAGAACTTACCTCTGGTGAAATTGGA 3593
|||||||| |||||| ||||| || ||||||||||||||||||||||||||||||||||
Sbjct 3445 CTGGCCAA-AAAAAA--GGGAAGAAACCACGAAGAAGAACTTACCTCTGGTGAAATTGGA 3501
Query 3594 CTTCTTCTTCTGTCCTATTTCTAGATGTATTATTGCTTCTTTCtttttatttattttttt 3653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3502 CTTCTTCTTCTGTCCTATTTCTAGATGTATTATTGCTTCTTTCTTTTTATTTATTTTTTT 3561
Query 3654 CATCACTGGAATTATGTAAAATTGTATCTGTAACTTCTTCACCttttttttttttACATG 3713
|| | ||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 3562 CA-C--TGGAATTATGTAA--TTGTATCTGTAACTTCTTCAACTTTTTTTTTT--ACATG 3614
Query 3714 TTTCTTGTATTGATTCTCCAAAAGCATCCGGGGATTTGTTTTTTATCCTCCTGAAACAAG 3773
||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||
Sbjct 3615 TTTCTTGTATTGATTCTG-AAA-GCATCCGGGGATGTGTTTTTTATCCTCCTGAAACAAG 3672
Query 3774 AAAACAAAGAAACTATTCATT 3794
|||||||||||||||||||||
Sbjct 3673 AAAACAAAGAAACTATTCATT 3693
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 143667338075
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5