BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G53480.1
Length=4565
Score E
Sequences producing significant alignments: (Bits) Value
Ahg485725 jgi|Araly1|485725|fgenesh2_kg.5__1717__AT3G53480.1 7155 0.0
Ahg901596 jgi|Araly1|901596|Al_scaffold_0004_2246 3386 0.0
> Ahg485725 jgi|Araly1|485725|fgenesh2_kg.5__1717__AT3G53480.1
Length=4528
Score = 7155 bits (3874), Expect = 0.0
Identities = 4252/4439 (96%), Gaps = 7/4439 (0%)
Strand=Plus/Plus
Query 1 ATCTCTCATTTAGACTTTAAATTTCTGATTTCAGAGAGGTC-AACT----CTTTAAGCCA 55
||||||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct 1 ATCTCTCATTTAGACTTTAAATTTCTGATTTCAGAGAGGTCAAATTAAAAAAAAAAGCCA 60
Query 56 AGCCATGGCTCATATGGTTGGAGCAGACGATATTGAGTCATTGAGAGTAGAGCTTGCAGA 115
|||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||
Sbjct 61 AGCCATGGCTCATATGGTTGGAGCAGACGAGATTGAGTCGTTGAGAGTGGAGCTTGCAGA 120
Query 116 GATCGGAAGAAGCATCAGATCATCATTCCGGAGACATACTTCGAGTTTCAGAAGCAGCTC 175
||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 121 GATTGGAAGAAGCATCAGATCATCGTTCCGGAGACACACTTCGAGTTTCAGAAGCAGCTC 180
Query 176 TTCAATATATGAAGTTGAAAATGATGGTGATGTTAATGATCATGATGCAGAGTATGCTCT 235
||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 TTCAAGATATGAACTTGAAAATGATGGTGATGTTATTGATCATGATGCAGAGTATGCTCT 240
Query 236 GCAATGGGCTGAGATTGAGAGATTACCAACTGTCAAGCGAATGAGATCGACTCTCCTTGA 295
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 241 GCAATGGGCTGAGATTGAGAGATTACCAACTGTCAAACGAATGAGATCGACTCTCCTTGA 300
Query 296 TGATGGCGATGAGTCCATGACCGAGAAAGGAAGAAGAGTCGTTGATGTCACAAAGCTTGG 355
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 301 TGATGGCGATGAGTCCATGTCCGAGAAAGGAAGAAGGGTCGTTGATGTCACAAAGCTTGG 360
Query 356 AGCCGTGGAACGTCATCTGATGATTGAGAAACTCATCAAACACATTGAGAATGATAATCT 415
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 AGCCATGGAACGACATCTGATGATTGAGAAACTCATCAAACACATTGAGAATGATAATCT 420
Query 416 CAAGTTGCTCAAGAAAATCAGGAGAAGAATAGACAGAGTCGGGATGGAGTTACCGACCAT 475
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 CAAATTGCTCAAGAAAATCAGGAAAAGAATAGACAGAGTCGGGATGGAGTTACCGACCAT 480
Query 476 AGAAGTGAGGTACGAGAGTTTAAAAGTGGTGGCCGAGTGCGAGGTTGTCGAAGGGAAGGC 535
||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||
Sbjct 481 AGAAGTGAGGTACGAGAGTTTAAAAGTGGAGGCCGAGTGCGAGATTGTTGAAGGGAAGGC 540
Query 536 ACTTCCAACACTGTGGAACACTGCTAAGCGTGTTTTATCTGAACTGGTGAAGCTCACTGG 595
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 541 ACTTCCAACACTGTGGAACACTGCTAAGCGCGTTTTATCTGAACTGGTGAAGCTCACTGG 600
Query 596 TGCAAAAACACATGAAGCCAAGATAAACATTATTAATGATGTTAATGGCATTATAAAGCC 655
|||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||
Sbjct 601 TGCAAAAACACACGAAGCGAAGATAAACATTATTAATGATGTTAATGGCGTTATAAAGCC 660
Query 656 AGGAAGGTTAACACTGTTGCTTGGTCCTCCTAGCTGCGGAAAAACAACTTTGTTAAAGGC 715
|||||||||||||||||||||||||||||| | || |||||||||||||||||||||||
Sbjct 661 GGGAAGGTTAACACTGTTGCTTGGTCCTCCTGGATGTGGAAAAACAACTTTGTTAAAGGC 720
Query 716 CTTGTCTGGAAATTTAGAAAACAATCTAAAGTGTTCAGGTGAAATATCTTACAATGGACA 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 CTTGTCTGGAAATTTAGAAAACAATCTAAAGTGTTCAGGTGAAATATCTTACAATGGACA 780
Query 776 CAGACTGGATGAGTTTGTTCCTCAGAAAACTTCAGCGTACATAAGTCAATATGATCTGCA 835
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 781 CAGACTGGACGAGTTTGTTCCTCAGAAAACTTCGGCGTACATAAGTCAATATGATCTGCA 840
Query 836 CATTGCAGAGATGACAGTGAGGGAGACAGTTGACTTCTCAGCTCGTTGTCAGGGCGTTGG 895
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 841 CATTGCAGAGATGACAGTGAGGGAGACAGTTGATTTCTCAGCTCGTTGTCAGGGAGTTGG 900
Query 896 TAGCCGAACAGATATTATGATGGAAGTTAGTAAAAGAGAAAAGGAAAAAGGAATCATTCC 955
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 901 TAGCCGAACAGATATAATGATGGAAGTCAGTAAAAGAGAAAAGGAAAAAGGAATCATTCC 960
Query 956 TGACACAGAAGTGGATGCTTACATGAAAGCAATTTCTGTTGAAGGACTCCAAAGAAGTCT 1015
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 961 TGACACAGAAGTGGATGCTTACATGAAAGCAATTTCTGTTGAAGGACTCCAAAGAAATCT 1020
Query 1016 GCAAACAGATTACATTTTGAAGATTCTCGGACTTGATATTTGTGCAGAAATATTGATTGG 1075
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1021 GCAAACAGATTACATCTTGAAGATTCTCGGACTTGATATTTGTGCAGAAACATTGATTGG 1080
Query 1076 AGATGTGATGAGGAGAGGTATATCAGGAGGTCAAAAGAAGCGTCTTACCACAGCTGAGAT 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 AGATGTGATGAGGAGAGGTATATCAGGAGGTCAAAAGAAGCGTCTTACCACAGCTGAGAT 1140
Query 1136 GATCGTTGGCCCGACAAAGGCTCTGTTTATGGATGAAATAACAAATGGCCTAGACAGCTC 1195
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||
Sbjct 1141 GATTGTTGGCCCGACAAAGGCTCTGTTTATGGATGAAATAACAAATGGCTTAGACAGTTC 1200
Query 1196 CACAGCTTTTCAGATTGTCAAATCTCTTCAGCAGTTTGCTCACATATCAAGCGCTACTGT 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 CACAGCTTTTCAGATTGTCAAATCTCTTCAGCAGTTTGCTCACATATCAAGCGCTACTGT 1260
Query 1256 ACTTGTTTCGCTTCTTCAACCCGCCCCAGAATCCTATGACCTCTTTGATGACATTATGCT 1315
||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||
Sbjct 1261 GCTTGTTTCGCTTCTTCAACCCGCCCCAGAGTCCTTTGACCTCTTTGATGACATAATGCT 1320
Query 1316 GATGGCCAAAGGAAGAATCGTGTATCATGGTCCACGCGGTGAAGTCCTTAACTTCTTTGA 1375
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 1321 GATGGCCAAAGGAAGAATCATGTATCATGGTCCACGCGGTGAAGTCCTGAACTTCTTTGA 1380
Query 1376 GGATTGTGGATTCCGATGCCCTGAAAGGAAGGGTGTTGCAGACTTTCTCCAGGAGGTTAT 1435
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1381 GGATTGTGGATTCCGATGCCCTGAAAGGAAAGGTGTCGCAGACTTTCTCCAGGAGGTTAT 1440
Query 1436 ATCCAAAAAAGATCAAGCACAATACTGGTGGCACGAGGATTTACCTTACAGTTTTGTCTC 1495
|||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct 1441 ATCCAAAAAAGACCAAGCACAATACTGGCGGCACGAGGATTTACCTTATAGTTTTGTCTC 1500
Query 1496 GGTAGAAATGTTGTCGAAGAAGTTCAAGGACTTGAGTATTGGGAAAAAGATCGAAGACAC 1555
|||||| |||||||| |||||||||||||| ||||||||||| |||||||| ||| ||||
Sbjct 1501 GGTAGATATGTTGTCAAAGAAGTTCAAGGAGTTGAGTATTGGAAAAAAGATGGAACACAC 1560
Query 1556 TCTGTCAAAGCCATATGATAGATCCAAAAGCCATAAGGATGCTTTGTCCTTCAGTGTGTA 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 TCTGTCAAAGCCATATGATAGATCCAAAAGCCATAAGGATGCTTTGTCCTTCAGTGTGTA 1620
Query 1616 TTCTCTTCCAAACTGGGAGCTGTTCATAGCATGCATATCAAGAGAGTATCTTCTCATGAA 1675
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1621 TTCTCTTCCAAACTGGGAGCTGTTCATAGCATGCATATCAAGAGAATATCTTCTCATGAA 1680
Query 1676 GAGAAACTATTTCGTCTATATTTTCAAGAC-TGCTCAGCTTGTTATGGCCGCATTCATCA 1734
|||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||||
Sbjct 1681 GAGAAACTATTTCGTCTATATTTTCAAGACAT-CTCAGCTTGTTATGGCCGCATTTATCA 1739
Query 1735 CTATGACAGTGTTTATCCGAACACGGATGGGTATTGATATCATTCATGGAAATTCTTACA 1794
||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1740 CTATGACTGTGTATATCCGAACACGGATGGGTATTGATATCATTCATGCAAATTCTTACA 1799
Query 1795 TGAGTGCCCTCTTTTTCGCCCTCATTATACTTCTTGTTGACGGATTCCCAGAGTTGTCTA 1854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 TGAGTGCCCTCTTTTTCGCCCTCATTATACTTCTTGTTGACGGATTCCCAGAGTTGTCTA 1859
Query 1855 TGACGGCTCAACGTCTAGCCGTGTTTTATAAGCAGAAGCAGTTGTGTTTCTATCCTGCAT 1914
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1860 TGACGGCTCAACGCCTAGCCGTGTTTTACAAGCAGAAGCAGTTGTGTTTCTATCCTGCAT 1919
Query 1915 GGGCGTATGCAATCCCTGCAACAGTGTTAAAGGTCCCTCTCTCGTTCTTTGAATCTCTCG 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 GGGCGTATGCAATCCCTGCAACAGTGTTAAAGGTCCCTCTCTCGTTCTTTGAATCTCTCG 1979
Query 1975 TTTGGACCTGCCTCTCATACTATGTCATTGGATACACCCCTGAAGCATCCAGGTTCTTCA 2034
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1980 TTTGGACCGGCCTCACATACTATGTCATTGGATACACCCCTGAAGCATCCAGGTTTTTCA 2039
Query 2035 AGCAGTTCATTCTACTCTTTGCTGTTCACTTCACCTCGATATCCATGTTCCGGTGTCTAG 2094
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 2040 AGCAGTTCATTCTACTCTTTGCTGTCCACTTCACCTCAATATCCATGTTCCGGTGTCTAG 2099
Query 2095 CTGCAATCTTCCAGACAGTAGTTGCTTCAATCACAGCTGGCAGTTTTGGTATATTATTCA 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2100 CTGCAATCTTCCAGACAGTAGTTGCTTCAATCACAGCTGGCAGTTTTGGTATATTATTCA 2159
Query 2155 CATTTGTCTTTGCCGGTTTCGTCATTCCACCACCTTCTATGCCAGCATGGCTCAAGTGGG 2214
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2160 CATTTGTCTTTGCCGGTTTCGTCATTCCACCACCTTCTATGCCAGCATGGCTTAAGTGGG 2219
Query 2215 GTTTCTGGGCAAATCCTTTGAGTTACGGTGAGATTGGGTTATCAGTAAACGAGTTTCTTG 2274
||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 2220 GTTTCTGGGTAAATCCTTTGAGTTACGGTGAGATTGGGCTATCGGTAAACGAGTTTCTTG 2279
Query 2275 CTCCAAGGTGGAATCAGATGCAACCCAATAATTTTACCTTAGGACGAACCATACTCCAAA 2334
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2280 CTCCAAGGTGGAATCAGATGCAACCCAATAATGTTACCTTAGGACGAACCATACTCCAAA 2339
Query 2335 CCCGTGGAATGGACTACAACGGTTACATGTACTGGGTATCATTATGTGCCTTGTTGGGTT 2394
||||||||||||||||| | || |||||||||||||||||||| | ||||||||||||||
Sbjct 2340 CCCGTGGAATGGACTACGATGGCTACATGTACTGGGTATCATTGTATGCCTTGTTGGGTT 2399
Query 2395 TCACTGTGCTCTTCAACATCATTTTCACTCTGGCTCTAACGTTCTTGAAATCACCCACAT 2454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2400 TCACTGTGCTCTTCAACATCATTTTCACTCTGGCTCTAACGTTCTTGAAATCACCCACAT 2459
Query 2455 CATCTCGAGCCATGATTTCGCAAGACAAACTCTCTGAGCTGCAAGGAACAGAAAAGTCAA 2514
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 2460 CATCTCGAGCCATGATTTCGCAAGACAAACTCTCAGAGCTGCAAGGAACAGAAAATTCAA 2519
Query 2515 CAGAAGATTCTTCTGTCAGGAAAAAGACCACAGACTCCCCTGTAAAGACCGAAGAAGAAG 2574
|||| || |||||||||| ||||||||||||||| |||||||||||||| ||||||||||
Sbjct 2520 CAGACGACTCTTCTGTCAAGAAAAAGACCACAGATTCCCCTGTAAAGACGGAAGAAGAAG 2579
Query 2575 ACAAAATGGTCTTACCATTCAAGCCTCTCACTGTAACATTTCAAGACTTGAACTATTTCG 2634
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2580 GCAATATGGTCTTACCATTCAAGCCTCTCACTGTAACATTTCAAGACTTGAAGTATTTCG 2639
Query 2635 TTGACATGCCAGTGGAGATGAGAGACCAAGGATATGATCAGAAGAAACTACAACTTCTCT 2694
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2640 TTGACATGCCCGTGGAGATGAGAGACCAAGGATATGATCAGAAGAAACTACAACTTCTCT 2699
Query 2695 CAGATATCACAGGAGCTTTCCGTCCCGGAATCCTAACGGCACTAATGGGAGTGAGTGGAG 2754
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 2700 CAGATATCACAGGAGCTTTCCGTCCCGGAATTCTAACGGCATTAATGGGAGTGAGTGGAG 2759
Query 2755 CTGGAAAAACCACTCTTCTCGACGTTCTAGCCGGAAGGAAAACAAGCGGATACATCGAAG 2814
| |||||||||||||| ||||||||| |||||||||| ||||| ||||||||||||||||
Sbjct 2760 CCGGAAAAACCACTCTCCTCGACGTTTTAGCCGGAAGAAAAACCAGCGGATACATCGAAG 2819
Query 2815 GAGACATTAGAATCAGTGGCTTCCCTAAAGTCCAAGAAACATTCGCTAGAGTCTCAGGCT 2874
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2820 GAGACATCAGAATCAGTGGCTTCCCTAAAGTCCAAGAAACATTCGCTAGAGTCTCAGGCT 2879
Query 2875 ACTGTGAACAAACAGATATTCACTCACCAAACATCACTGTAGAAGAATCCGTAATCTACT 2934
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 2880 ACTGTGAACAAACAGATATTCACTCACCAAACATCACCGTCGAAGAATCCGTAATCTACT 2939
Query 2935 CGGCTTGGCTTCGTCTAGCTCCTGAGATCGATGCCACAACAAAAACCAAATTCGTGAAGC 2994
| |||||||||||||||||||||||||||||| || |||| ||||||||||| |||||||
Sbjct 2940 CCGCTTGGCTTCGTCTAGCTCCTGAGATCGATTCCGCAACCAAAACCAAATTTGTGAAGC 2999
Query 2995 AAGTGCTTGAGACGATCGAATTAGATGAGATTAAAGATTCATTGGTGGGAGTCACCGGAG 3054
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 3000 AAGTGCTTGAGACGATCGAATTAGATGAAATCAAAGATTCATTGGTGGGAGTCACCGGAG 3059
Query 3055 TTAGTGGATTATCGACGGAGCAAAGGAAGAGATTGACGATTGCGGTGGAGTTGGTGGCGA 3114
| |||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||
Sbjct 3060 TGAGTGGATTATCGACGGAGCAGAGGAAGAGATTGACAATTGCGGTGGAATTGGTGGCGA 3119
Query 3115 ATCCGTCGATTATATTTATGGATGAGCCAACGACGGGGCTAGACGCAAGAGCAGCTGCCA 3174
|||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 3120 ATCCGTCGATTATATTCATGGACGAGCCAACGACGGGGCTAGACGCAAGAGCAGCCGCCA 3179
Query 3175 TTGTTATGAGAGCTGTGAAGAACGTCGCTGATACTGGACGAACCATCGTCTGTACTATTC 3234
||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 3180 TTGTTATGAGAGCTGTGAAGAACGTTGCTGATACTGGACGAACCATCGTCTGCACTATTC 3239
Query 3235 ATCAGCCTAGTATCGACATTTTTGAAGCCTTCGACGAGCTGGTGCTTCTTAAAAGAGGTG 3294
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3240 ATCAGCCTAGTATCGACATTTTTGAAGCCTTCGACGAGTTGGTGCTTCTTAAAAGAGGTG 3299
Query 3295 GTCGCATGATCTACACAGGACCATTAGGCCAACATTCACGTCACATTATCGAGTATTTTG 3354
|||||||||| |||||||||||||| || |||||||||||||| ||||| ||||||||||
Sbjct 3300 GTCGCATGATTTACACAGGACCATTGGGTCAACATTCACGTCATATTATTGAGTATTTTG 3359
Query 3355 AGAGTGTTCCTGAAATTCCTAAAATAAAAGACAACCACAATCCAGCAACATGGATGCTTG 3414
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3360 AGAGTGTTCCTGAAATTCCTAAAATAAAAGACAACCATAATCCAGCAACATGGATGCTTG 3419
Query 3415 ATGTTAGTTCACAGTCGGTAGAAATTGAACTTGGTGTCGATTTCGCAAAAATCTACCATG 3474
||||||||||||| || |||||| |||||||||| |||||||| || |||||||||||||
Sbjct 3420 ATGTTAGTTCACAATCTGTAGAAGTTGAACTTGGCGTCGATTTTGCTAAAATCTACCATG 3479
Query 3475 ACTCTGCTCTTTACAAGCGAAACTCAGAGCTTGTGAAACAGTTGAGCCAGCCAGATTCAG 3534
||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||
Sbjct 3480 ACTCTGCTCTTTACAAGAGAAACGCAGAGCTTGTGAAACAGTTGAGCCAACCAGATTCAG 3539
Query 3535 GATCAAGTGATATACAGTTTAAGAGAACCTTTGCACAAAGCTGGTGGGGACAATTCAAAT 3594
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||
Sbjct 3540 GATCAAGTGATATACAGTTTAAGAGAACTTTTGCACAAAGTTGGTGGGGACAATTCAGAT 3599
Query 3595 CTATTCTATGGAAAATGAACTTGTCTTATTGGAGAAGCCCTTCTTATAACCTAATGCGTA 3654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3600 CTATTCTATGGAAAATGAACTTGTCTTATTGGAGAAGCCCTTCTTATAACCTAATGCGTA 3659
Query 3655 TGATGCACACTTTAGTCTCTTCTTTGATCTTCGGCGCACTTTTCTGGAAACAAGGCCAAA 3714
|||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 3660 TGATTCACACATTAGTCTCTTCTTTGATCTTCGGCTCACTTTTCTGGAAACAAGGCCAGA 3719
Query 3715 ATCTAGATACTCAACAGAGTATGTTCACAGTATTTGGAGCGATCTACGGTTTGGTACTCT 3774
|| |||||||||||||| |||||||||| || |||||||||||||| |||||||| ||||
Sbjct 3720 ATATAGATACTCAACAGGGTATGTTCACTGTGTTTGGAGCGATCTATGGTTTGGTGCTCT 3779
Query 3775 TCTTAGGGATAAACAATTGTGCATCAGCTCTTCAATATTTCGAAACAGAGAGAAATGTTA 3834
|||||||||||||||||||| |||||||| |||||||| | ||||||||| |||||||||
Sbjct 3780 TCTTAGGGATAAACAATTGTTCATCAGCTATTCAATATATAGAAACAGAGCGAAATGTTA 3839
Query 3835 TGTACCGGGAAAGATTCGCAGGGATGTACTCAGCGACTGCTTATGCATTGGGTCAAGTGG 3894
||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 3840 TGTACCGCGAAAGATTCGCAGGAATGTACTCAGCGACTGCTTACGCATTGGGTCAAGTGG 3899
Query 3895 TGACTGAGATACCTTATATATTCATACAAGCTGCCGAGTTTGTGATCGTAACATATCCAA 3954
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 3900 TGACTGAGATACCTTATATATTCATACAAGCCGCCGAGTTTGTGATCATAACATATCCAA 3959
Query 3955 TGATCGGTTTCTATCCTTCAGCCTACAAAGTCTTTTGGTCACTCTACTCTATGTTTTGCT 4014
|||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||
Sbjct 3960 TGATCGGTTTCTATCCTTCAACCTACAAAGTCTTCTGGTCGCTCTACTCTATGTTTTGCT 4019
Query 4015 CACTACTCACTTTCAACTACCTTGCGATGTTCCTCGTCTCCATCACGCCAAACTTCATGG 4074
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 4020 CACTTCTCACTTTCAACTACCTCGCGATGTTCCTCGTCTCCATCACGCCAAACTTCATGG 4079
Query 4075 TTGCCGCGATTCTTCAATCGCTCTTTTATGTTGGTTTCAACCTTTTTTCGGGGTTTTTGA 4134
||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||
Sbjct 4080 TTGCCGCGATTCTTCAATCGCTCTTCTATGTTAATTTCAACCTTTTTTCCGGGTTTTTGA 4139
Query 4135 TCCCCCAAACGCAAGTACCAGGGTGGTGGATTTGGTTATATTATCTAACACCAACGTCTT 4194
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 4140 TCCCCCAAACGCAAGTTCCAGGGTGGTGGATTTGGTTATATTATCTAACGCCAACGTCTT 4199
Query 4195 GGACACTCAACGGGTTTATCTCGTCCCAATACGGCGATATTCATGAAGAGATCAATGTCT 4254
||||||||||||| ||| |||||||||||||||| |||||| | ||| ||||||||||||
Sbjct 4200 GGACACTCAACGGATTTTTCTCGTCCCAATACGGTGATATTGACGAAAAGATCAATGTCT 4259
Query 4255 TTGGACAATCCACGACGGTTGCAAGATTCTTGAAAGACTATTTTGGATTTCATCATGACC 4314
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4260 TTGGAGAATCCACGACGGTTGCAAGATTCTTGAAAGACTATTTTGGATTTCATCATGACC 4319
Query 4315 TTTTGGCGGTTACCGCGGTTGTTCAAATCGCTTTTCCCATTGCCTTAGCTTCTATGTTTG 4374
|||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 4320 GTTTGGCGGTTACGGCGGTTGTTCAAATCGCTTTTCCCATTGCGTTAGCTTCTATGTTTG 4379
Query 4375 CATTCTTCGTGGGCAAACTCAACTTCCAACGAAGATGATCATGCCAATTAGTCTTCATC 4433
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4380 CATTCTTCGTGGGCAAACTCAACTTCCAACGAAGATGATCATGCCAATTAGTCTTCATC 4438
Score = 82.4 bits (44), Expect = 3e-14
Identities = 70/81 (86%), Gaps = 7/81 (9%)
Strand=Plus/Plus
Query 4475 tttttgtttgtgaaaataaacatataacatataacttttctt-tt-tGGTATGTATATGA 4532
||||| ||||||||||||||||||| || | | ||||| | || || |||||||||||
Sbjct 4453 TTTTT-TTTGTGAAAATAAACATATTACTTTT--CTTTT-TGGTTATG-TATGTATATGA 4507
Query 4533 TTTTGAGGAAAGTAAACAAAG 4553
|||||||||||||||||||||
Sbjct 4508 TTTTGAGGAAAGTAAACAAAG 4528
> Ahg901596 jgi|Araly1|901596|Al_scaffold_0004_2246
Length=4275
Score = 3386 bits (1833), Expect = 0.0
Identities = 3482/4266 (82%), Gaps = 161/4266 (4%)
Strand=Plus/Plus
Query 217 ATGATGCAGAGTATGCTCTGCAATGGGCTGAGATTGAGAGATTACCAACTGTCAAGCGAA 276
|||| |||||| ||| |||||||||||||||||| ||||||| || ||| | || ||
Sbjct 83 ATGAGGCAGAGCATGTTCTGCAATGGGCTGAGATCCAGAGATTGCCCACTTTTAAACGGC 142
Query 277 TGAGATCGACTCTCCTTG---ATGATGGCGATGAGTCCATGACCGAGAAAGG-AAGAAGA 332
|||||||| |||| | | | ||||||| | | | || | |||||||| || |||
Sbjct 143 TGAGATCGTCTCTGGTAGACAACAATGGCGA-G-G--C-TG-CGGAGAAAGGAAAAAAG- 195
Query 333 GTCGTTGATGTCACAAAGCTTGGAGCCGTGGAACGTCATCTGATGATTGAGAA-ACTCAT 391
|| ||||||||||| |||||||||||| | ||||||||| ||||||||||||| | | ||
Sbjct 196 GTTGTTGATGTCACCAAGCTTGGAGCCATAGAACGTCATTTGATGATTGAGAAGA-TGAT 254
Query 392 CAAACACATTGAGAATGATAATCTCAAGTTGCTCAAGAAAATCAGGAGAAGAATAGACAG 451
|||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||
Sbjct 255 CAAACACATTGAGAATGATAATCTCAAGCTGCTCAAGAAAATCAGAAGAAGAATGGACAG 314
Query 452 AGTCGG-GATGGAGTTACCGACCATAGAAGTGAGGTACGAG-AGTTTAAAAGTGGTG--G 507
|| || | ||||||| |||| |||||| |||||||| ||| | ||| | ||| || |
Sbjct 315 GGTTGGTG-TGGAGTTTCCGAGCATAGAGGTGAGGTATGAGCA-TTT--AGGTGTTGAAG 370
Query 508 CCGAGTGCGAGGTTGTCGAAGGGAAGGCACTTCCAACACTGTGGAACACTGCT-AAGCGT 566
| | ||| ||||| || ||||||||||| |||||||| | ||||| || | |||||
Sbjct 371 CAGCGTGTGAGGTCGTTGAAGGGAAGGCGCTTCCAACTTTATGGAATTCT-TTGAAGCGA 429
Query 567 GTTTTATCTGA-AC-TGGTGAAGCTCACTGGTGCAAAAACACATGAAGCCAAGATAAACA 624
| ||| ||| | || || ||||||| | |||||||| ||||| ||||||||||||||||
Sbjct 430 G-TTT-TCTTAGACTTGTTGAAGCTGAGTGGTGCAAGAACACGCGAAGCCAAGATAAACA 487
Query 625 TTA-TTAATGATGTTAATGGCATTATAAAG-CCAGGAAGGTTAACACTGTTGCTTGGTCC 682
|| ||| ||||||| || || || || || ||||||||||||||||||||||||||
Sbjct 488 -TACTTACCGATGTTAGCGGTATCAT-TAGCCCGGGAAGGTTAACACTGTTGCTTGGTCC 545
Query 683 TCCTAGCTGCGGAAAAACAACTTTG-TTAAAGGCCTTGTCTGGAAATTTAGAAAACAATC 741
|||| | || || ||||| ||| || || ||||| |||||||| ||||| ||||| ||||
Sbjct 546 TCCTGGATGTGGCAAAACTACTCTGCTT-AAGGCTTTGTCTGGGAATTTGGAAAAAAATC 604
Query 742 TAAAGTGTTCAGGTGAAAT-ATCTTACAATGGACACAGACTGGATGAGTTTGTTCCTCAG 800
||||| |||| |||||||| | | ||||||||||| ||||| | ||| |||||||||||
Sbjct 605 TAAAGCGTTCTGGTGAAATCA-CCTACAATGGACATGGACTGAACGAGGTTGTTCCTCAG 663
Query 801 AAAACTTCAGCGTACATAAGTCAATATGATCTGCACATTGCAGAGATGACAGTGAGGGAG 860
||||| || ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||
Sbjct 664 AAAACATCGGCGTATATAAGTCAACATGATCTTCACATTGCAGAGATGACTGTGAGGGAG 723
Query 861 ACAGTTGACTTCTCAGCTCGTTGTCAGGGCGTTGGTAGCCGAACAGATATTATGATGGAA 920
||| | |||||||||||||||||||| || || ||||||||||||||||| ||||||||
Sbjct 724 ACAATCGACTTCTCAGCTCGTTGTCAAGGTGTCGGTAGCCGAACAGATATCATGATGGAG 783
Query 921 GTTAGTAAAAGAGAAAAGGAAAAAGGAATCATTCCTGACACAGAAGTGGATGCTTACATG 980
|| ||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||
Sbjct 784 GTCAGTAAAAGAGAAAAGGATGGTGGAATCATTCCTGACCCAGAAGTAGATGCTTACATG 843
Query 981 AAAGCAATTTCTGTTGAAGGACTCCAAAGAAGTCTGCAAACAGATTACATTTTGAAGATT 1040
|| ||||| || ||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 844 AAGGCAATATCGGTTAAAGGACTTAAAAGAAGTCTGCAAACAGATTACATTTTGAAGATC 903
Query 1041 CTCGGACTTGATATTTGTGCAGAAATATTGATTGG-AGATGTGATGAGGAGAGGTATATC 1099
|| || ||||| ||||||||||||| |||| |||| | ||| |||| ||||| |||||
Sbjct 904 CTGGGGCTTGACATTTGTGCAGAAACATTGGTTGGCA-ATGCAATGAAAAGAGGCATATC 962
Query 1100 AGGAGGTCAAAAGAAGCGTCTTACCACAGCTGAGATGATCGTTGGCCCGACAAAGGCTCT 1159
|| || ||||||||||| ||||| |||||||| ||||||||||| || ||||| |||||
Sbjct 963 CGGGGGACAAAAGAAGCGCCTTACTACAGCTGAAATGATCGTTGGTCCAACAAAAGCTCT 1022
Query 1160 GTTTATGGATGAAATAACAAATGGCCTAGACAGCTCCACAGCTTTTCAGATTGTCAAATC 1219
||| ||||||||||||||||| ||| ||||||| |||||||| |||||||||||||| ||
Sbjct 1023 GTTCATGGATGAAATAACAAACGGCTTAGACAGTTCCACAGCGTTTCAGATTGTCAAGTC 1082
Query 1220 TCTTCAGC-AGTTTGCTCACA-TATCAAGCGCTACTGTACTTGTTTCGCTTCTTCAACCC 1277
|||||||| | | | |||||| || ||| ||| ||||| ||||||| ||||| |||||
Sbjct 1083 TCTTCAGCAACTCT-CTCACATTACCAA-CGCAACTGTGTTTGTTTCCCTTCTACAACCT 1140
Query 1278 GCCCCAGAATCCTATGACCTCTTTGATGACATTATGCTGATGGCCAAAGGAAGAATCGTG 1337
|| |||||||| ||||||||||| || || ||| |||| ||||| |||||| ||| |||
Sbjct 1141 GCTCCAGAATCATATGACCTCTTCGACGATATTGTGCTCATGGCTGAAGGAAAAATTGTG 1200
Query 1338 TATCATGGTCCACGCGGTGAAGTCCTT--AACTTCTTTGAGGATTGTGGATTCCGATGCC 1395
|| || |||||||||| || || ||| || ||||| || || |||||||| | |||||
Sbjct 1201 TACCACGGTCCACGCGAAGAGGT-CTTGGAA-TTCTTCGAAGAATGTGGATTTCAATGCC 1258
Query 1396 CTGAAAGGAAGGGTGTTGCAGACTTTCTCCAGGAGGTTATATCCAAAAAAGATCAAGCAC 1455
| ||||||| |||||||||||||||||||||||||||||||| ||||| || |||| ||
Sbjct 1259 CAAAAAGGAAAGGTGTTGCAGACTTTCTCCAGGAGGTTATATCTAAAAAGGACCAAGGAC 1318
Query 1456 AATACTGG-TGGCACGAGGATTTACCTTACAGTTTTGTCTCGGTAGAAATGTTGTCGAAG 1514
| |||||| | |||| |||| |||| | || |||||||| ||||| | ||||| |||
Sbjct 1319 AGTACTGGCT-GCACCAGGACATACCCCATAGCTTTGTCTCAGTAGACACATTGTCAAAG 1377
Query 1515 AAGTTCAAGGACTT-GAGTATTGGGAAAAAGATCGAAGACA-CTCTGTCAAAGCCATATG 1572
|| || |||||||| ||| |||||||||||||| || || | | || || ||||||||||
Sbjct 1378 AAATTTAAGGACTTAGAG-ATTGGGAAAAAGATTGAGGA-ATCCCTCTCTAAGCCATATG 1435
Query 1573 ATAGATCCAAAAGC-CAT-AAGG---ATGCTTTGTCCTTCAGTGTGTATTCTCTTCCAAA 1627
||| || ||||| | | | |||| ||||| | ||||||| ||||||||| ||||||||
Sbjct 1436 ATAAAT-CAAAAACTC-TCAAGGATAATGCTCTCTCCTTCAATGTGTATTCACTTCCAAA 1493
Query 1628 CTGGGAGCTGTTCATAGCATGCATATCAAGAGAGTATCTTCTCATGAAGAGAAACTATTT 1687
||||| || || | | ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1494 GTGGGAACTATTTAGAACATGCATCTCAAGAGAGTATCTTCTCATGAAGAGAAACTATTT 1553
Query 1688 CGTCTATATTTTCAAGACTGCT-CAGCTTGTTATGGCCGCATTCATCACTATGACAGTGT 1746
|||||| | |||||||| | | ||||||||| | |||||| ||||||| ||||||||||
Sbjct 1554 CGTCTACCTCTTCAAGAC-GTTTCAGCTTGTTCTAGCCGCAATCATCACCATGACAGTGT 1612
Query 1747 TTATCCGAACACGGATGGGTATTGATATCATTCATGGAAATTCTTACATGAGT-GCCCTC 1805
|||| |||||| ||||| || |||||| ||||||||||||||||||||||| | | ||
Sbjct 1613 TTATTCGAACAAAGATGGACATAGATATCGTTCATGGAAATTCTTACATGAGTTGTC-TC 1671
Query 1806 TTTTTCGCC-CTCATTATACTTCTTGTTGACGG-ATTCCCAGAGTTGTCTATGACGGCTC 1863
||||| || || |||||||||| ||||| || ||||| |||| |||||||||| | ||
Sbjct 1672 TTTTTTGCAACTG-TTATACTTCTGGTTGATGGTATTCC-AGAGCTGTCTATGACTGTTC 1729
Query 1864 AACGTCTAGCCGTGTTTTATAAGCAGAAGCAGTTGTGTTTCTATCCTGCATGGGCGTATG 1923
|||| || ||||||| || ||||||||||| ||||||||||||| || ||||| |||
Sbjct 1730 AACGCCTTTCCGTGTTCTACAAGCAGAAGCAACTGTGTTTCTATCCAGCTTGGGCTTATT 1789
Query 1924 CAATCCCTGCAACAGTGTTAAAGGTCCCTCTCTCGTTCTTTGAATCTCTCGTTTGGACCT 1983
|||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||
Sbjct 1790 CAATCCCTGCAACAGTGTTAAAGGTCCCTCTCTCCTTGTTAGAATCTCTCGTCTGGACCA 1849
Query 1984 GCCTCT-CATACTATGTCATTGGATACACCCCTGAAGCAT-CCAGGTTCTTCAAGCAGTT 2041
| || | | ||||||||||| |||||||| |||||||| | || |||||||| ||| ||
Sbjct 1850 GTCT-TACTTACTATGTCATCGGATACACTCCTGAAGCTTACC-GGTTCTTCCGGCAATT 1907
Query 2042 CATTCTACTCTTTGCTGTTCACTTCACCTCGATATCCATGTTCCGGTGTC-TAGCTGCAA 2100
|||||| |||||||||||||||||||| ||||||||||||||||| || | ||||| |||
Sbjct 1908 CATTCTGCTCTTTGCTGTTCACTTCACATCGATATCCATGTTCCGATG-CATAGCTTCAA 1966
Query 2101 TCTTCCAGACAGTAGTTGCTTCAATCACAGCTGGCAGTTTTGGT-ATATTATTCACATTT 2159
|||| || |||| ||||||| |||| |||||||| || |||| | || ||| |||| |||
Sbjct 1967 TCTTTCAAACAGGAGTTGCTACAATGACAGCTGGTAGCTTTG-TCATGTTAATCACCTTT 2025
Query 2160 GTCTTTGCCGGTTTCGTCATTCCACC-ACCTTCTATGCCAGCATGGCTCAAGTGGGGTTT 2218
|| ||||||||||| | ||| ||| ||| |||||| | ||||| |||||||||||
Sbjct 2026 GTATTTGCCGGTTTTGCCATCCCATATACCGA-TATGCCGGGGTGGCTGAAGTGGGGTTT 2084
Query 2219 CTGGGCAAATCCTTTGAGTTACGGTGAGATTGGGTTATCAGTAAACGAGTTTCTTGCTCC 2278
||||| ||||||| | ||||||| ||||||||| | || ||||||||||||||||||||
Sbjct 2085 CTGGGTAAATCCTATAAGTTACGCCGAGATTGGGCTCTCTGTAAACGAGTTTCTTGCTCC 2144
Query 2279 AAGGTGGAATCAGATGCAACCCA-ATAATTTTACCTTAGG-ACGAACCATACTCCAAACC 2336
||||| | || |||||||||| | ||| | ||||| || | ||||||||||| ||| |
Sbjct 2145 GCGGTGGCAGCAAATGCAACCCACA-AATGTCACCTTGGGGA-GAACCATACTCGAAAGC 2202
Query 2337 CGTGGAATGGACTACAACGGTTACATGTACTGGGTATCATTATGTGCCTTGTTGGGTTTC 2396
|| ||| || |||| | | ||||||||||||||| ||||||||||||||||||||| ||
Sbjct 2203 CGAGGACTGAACTATGATGATTACATGTACTGGGTCTCATTATGTGCCTTGTTGGGTCTC 2262
Query 2397 ACTGTGCTCTTCAACATCATTTTCACTCTGGCTCTAACGTT-CTTGAAATCACCCACATC 2455
||| | ||||||||| |||||||||||| ||||| | ||| ||||||||| ||||||||
Sbjct 2263 ACTATTATCTTCAACACCATTTTCACTCTAGCTCTGA-GTTTCTTGAAATCTCCCACATC 2321
Query 2456 ATCTCGAGCCATGATTTCGCAAGACAAACTCTCTGAGCTGCAAGGAACAGAAA-AGTCAA 2514
|||||| ||||||||||| ||||| || |||||||||||||||||||| ||| | |||
Sbjct 2322 ATCTCGTGCCATGATTTCTCAAGATAAGCTCTCTGAGCTGCAAGGAACC-AAATATTCAT 2380
Query 2515 CAGAAGATTCTTCTGTCAGGAAAAAGACCAC-AGACTCCCCTGTAAAGAC---CGAAGAA 2570
|| || | | | || || ||| |||| ||| || || | ||||| ||| ||
Sbjct 2381 CATCAG-T-CAA--GA-AG-AACAAG-CCACTAGATTCGCCAATGAAGACAATCGAGGAT 2433
Query 2571 GAAGACAAAATGGTCTTACCATTCAAGCCTCTCACTGTAACATTTCAAGACTTGAACTAT 2630
|| || ||| ||||||| || ||||| || || |||||||||||||||||||||||
Sbjct 2434 TCAGGGAAGATGATCTTACCTTTTAAGCCCCTGACCATAACATTTCAAGACTTGAACTAT 2493
Query 2631 TTCGTTGACATGCCAGTGGAGATGAGAGAC-CAAGGATATGATCAGAAGAAACTACAACT 2689
| ||| ||| | || |||||||||| || | ||||| || || ||||||| | || ||
Sbjct 2494 TACGTCGACGTACCTGTGGAGATGAAAG-CTCAAGGGTACAATGAGAAGAAGTTGCAGCT 2552
Query 2690 TCTCTCAGATATCACAGGAGCTTTCCGTCCCGGAATCCTAACGGCACTAATGGGAGTGAG 2749
||| ||||| ||||| ||| ||||| | ||||| | |||||||| | |||||| | ||
Sbjct 2553 TCTTTCAGAAATCACCGGATCTTTCAGGCCCGGTGTTCTAACGGCGTTGATGGGAATCAG 2612
Query 2750 TGGAGCTGGAAAAACCACTCTT-CTCGACGTTCTAGCCGGAAGGAAAACAAGCGGATACA 2808
|||||| |||||||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct 2613 TGGAGCCGGAAAAACCACT-TTACTCGACGTTCTAGCCGGAAGAAAAACAAGCGGATACA 2671
Query 2809 TCGAAGGAGACATTAGAATCAGTGGCTTCCCT-AAAGTCCAAGAAACATTCGCTAGAGTC 2867
| |||||||| ||||||||||| || || ||| |||||||||||||||||||||||||||
Sbjct 2672 TAGAAGGAGAGATTAGAATCAGCGG-TTACCTTAAAGTCCAAGAAACATTCGCTAGAGTC 2730
Query 2868 TCAGGCTACTGTGAACAAACAGATATTCACTCACCAAACATCACTGTAGAAGAATCCGTA 2927
|||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||| ||
Sbjct 2731 TCAGGCTACTGTGAACAAACGGATATACACTCACCAAACATCACAGTCGAAGAATCCCTA 2790
Query 2928 ATCTACTCGGCTTGGCTTCGTCTAGCTCCTGAGATCGATGCCACAA-CAAAAACCAAATT 2986
|| ||||| |||||||| ||||||| ||| || |||||| || ||| | |||| || |||
Sbjct 2791 ATTTACTCAGCTTGGCTCCGTCTAGTTCCAGAAATCGAT-CCTCAAACCAAAATCAGATT 2849
Query 2987 CGTGAAGCAAGTGCTTGAGACGATCGAA-TTAGATGAGATTAAAGATTCATTGGTGGGAG 3045
||||||||||| || |||||||| || || || ||||| |||||||| ||||| ||||
Sbjct 2850 TGTGAAGCAAGTTCTGGAGACGATAGAGCTT-GAGGAGATCAAAGATTCGTTGGTAGGAG 2908
Query 3046 TCACCGGAGTTAGTGGATTATCGACGGAGCAAAGGAAGAGATTGACGATT-GCGGTGGAG 3104
| |||| || || ||||||||||| ||||| |||||| | || || | | |||||||||
Sbjct 2909 TGGCCGGTGTGAGCGGATTATCGACAGAGCAGAGGAAGCGGTTAAC-AGTAGCGGTGGAG 2967
Query 3105 TTGGTGGCGAATCCGTCGATTATATTTATGGATGAGCCAACGACGGGGCTAGACGCAAGA 3164
|||||||| ||||||||||| ||||| ||||| ||||||||||||||||| |||||||||
Sbjct 2968 TTGGTGGCTAATCCGTCGATCATATTCATGGACGAGCCAACGACGGGGCTGGACGCAAGA 3027
Query 3165 GCAGCTGCCATTGTTATGAGAGCTGTGAAGAACGTCGCTGATACTGGACGAACCATCGTC 3224
||||| |||||||| |||||||||||||| ||||| ||||| ||||||||||| || |||
Sbjct 3028 GCAGCCGCCATTGTAATGAGAGCTGTGAAAAACGTTGCTGAGACTGGACGAACAATTGTC 3087
Query 3225 TGTACTATTCATCAGCCTAGTATCGACATTTTTGAAGCCTTCGACGAGCTGGTGCTTCTT 3284
|| ||||||||||||||||| ||| |||| |||||||||||||||||| || | |||||
Sbjct 3088 TGCACTATTCATCAGCCTAGCATCCACATCTTTGAAGCCTTCGACGAGTTGATTCTTCTG 3147
Query 3285 AAAAGAGGTGGTCGCATGATCTACACAGGACCA-TTAGGCCAACATTCA-C--GTCACAT 3340
|| || || ||||| || || |||| |||||| || || ||||||||| | || |||
Sbjct 3148 AAGAGCGGCGGTCGTATTATTTACAGTGGACCACTT-GGACAACATTCATCTTGTGTCAT 3206
Query 3341 TATCGAGTATTTTGAGAGTGTTCCTGAAATTCCTAAAATAAAAGACAACCACAATCCAGC 3400
| ||||||||| ||| | |||||| | || |||| || | |||||| ||||||||||
Sbjct 3207 T---GAGTATTTTCAGAATATTCCTGGAGTTGCTAAGATTAGAGACAAGTACAATCCAGC 3263
Query 3401 AACATGGATGCTTGATGTTAGTTCACAGTCGGTAGAAATTGAACTTGGTGTCGATTTCGC 3460
|||||||||||| || || | |||| |||| ||||| |||||||| | | ||||||||
Sbjct 3264 AACATGGATGCTAGAGGTGACTTCAGAGTCTGTAGAGATTGAACTCGACATGGATTTCGC 3323
Query 3461 AAAAATCTACCATGACTCTGCTCTTTACAAGCGA-AACTCAGAGCTTGTGAAACAGTTGA 3519
|||||||||| | || || | |||||||||| | ||||| |||||||| ||| || |||
Sbjct 3324 AAAAATCTACAACGAATCGGATCTTTACAAGA-ACAACTCCGAGCTTGTTAAAGAGCTGA 3382
Query 3520 GCCAGCCAGATTCA-GGATCAAGTGATATACAGTTT-AAGAGAACCTTTGCACA-AAGCT 3576
|| | || ||| || || ||||||||| | || ||| |||||||| ||||| || || ||
Sbjct 3383 GCAAACCGGAT-CACGGGTCAAGTGATTTGCA-TTTCAAGAGAACTTTTGCGCAGAA-CT 3439
Query 3577 GGTGGGGACAATTCAAATCTAT-TCTATGGAAAATGAACTTGTCTTATTGGAGAAGCCCT 3635
|||||| ||| || |||||| | ||||||||| |||| |||||||| |||||||||||
Sbjct 3440 GGTGGGAACAGTTTAAATCT-TGTCTATGGAAGATGAGTTTGTCTTACTGGAGAAGCCCA 3498
Query 3636 TCTTATAACCTAATGCGTAT-GATGCACACTTT-AGTCTCTTCTTTGATCTTCGG-CGCA 3692
|||| ||| | ||||| || | | |||||||| | |||||||||| ||||| || | |
Sbjct 3499 ACTTACAACTTGATGCGAATCGGT-CACACTTTCA-TCTCTTCTTTAATCTTTGGTCT-A 3555
Query 3693 CTTTTCTGGAAACAAGGCCAAAATCTAGATACTCAACAGAGTATGTTCACAGTATTT-GG 3751
|| |||||||| ||||| |||| ||||||| ||||||| | |||||||||| | | ||
Sbjct 3556 CTCTTCTGGAATCAAGGGAAAAAGATAGATACGCAACAGAATTTGTTCACAGT-TCTCGG 3614
Query 3752 AGCGATCTACGGTTTGGTACTCTTC-TTAGGGATAAACAATTGTGCATCAGCTCTT-CAA 3809
||||| || ||| | || |||||| || ||| ||| ||| || | |||||| || ||
Sbjct 3615 GGCGATTTATGGTCTAGTCCTCTTCGTTGGGGTTAA-CAACTGCACTTCAGCT-TTGCAG 3672
Query 3810 TATTTCGAAACAGAGAGAAATGTTATGTACCGGGAAAGATTCGCAGGGA-TGTACTCAGC 3868
||||| || |||||| | |||||||||||||| |||||||| || |||| ||||||| ||
Sbjct 3673 TATTTTGAGACAGAGCGTAATGTTATGTACCGCGAAAGATTTGC-GGGAATGTACTCCGC 3731
Query 3869 GACTGCTTATGCATTGGGTCAAGTGGTGACTGAGATACCTTATATATTCATACAA-GCTG 3927
| ||| |||||||||| |||||| |||||||| |||||||| |||||||| ||| || |
Sbjct 3732 GTTTGCCTATGCATTGGCTCAAGTTGTGACTGAAATACCTTACATATTCATCCAAAGC-G 3790
Query 3928 CCGAGTTTGTGATCGTAACATATCCAATGATCGGTTTCTATC-CTTCAGCCTAC-AAAGT 3985
| |||||||| || |||| |||||| ||||||||| |||| | | || ||| | |||||
Sbjct 3791 CAGAGTTTGTAATTGTAATATATCCTATGATCGGTCTCTA-CGCATCTTCCT-CTAAAGT 3848
Query 3986 CTTTTGGTCACTCTACT-CTATGTTTTGCTCACT-ACTCA-CTTTCAACTACCTTGCGAT 4042
||||||| ||||| | | ||||| ||| ||| |||| ||| ||||||||| |||||
Sbjct 3849 CTTTTGGAGTCTCTA-TGCAATGTTCTGCA-ACTTACTCTGCTT-CAACTACCTCGCGAT 3905
Query 4043 GTTCCTCGTCTCCATCACGCCAAACTTCATGGTTGCCGCGATTCTTCAATCGCTCTT-TT 4101
||||||| |||||||||| |||||||||||||| || || ||||| || ||||| || ||
Sbjct 3906 GTTCCTCATCTCCATCACTCCAAACTTCATGGTCGCAGCTATTCTCCAGTCGCTTTTCTT 3965
Query 4102 -ATGTTGGTTTCAACCTTTTTTCGGGGTTTTTGATCCCCCAAAC-GCAAGTACCAGGGTG 4159
||| || ||||||||| | || || |||||||| |||| |||| | ||| |||
Sbjct 3966 CATGACA-TT-CAACCTTTTCGCCGGATTCTTGATCCCA-AAACCGCAAATCCCAAAGTG 4022
Query 4160 GTGGATTTGGTTATATTATCTAACACCAACGTCTTGGACACTCAACGGGTTTATCTCGTC 4219
|||| | ||||| || |||||||| || || || ||||| |||||| |||| |||||||
Sbjct 4023 GTGGGTCTGGTTTTACTATCTAACCCCGACCTCATGGACGCTCAACCTGTTTTTCTCGTC 4082
Query 4220 CCAATACGGCGATATTCATGAAGAGATCAATGTC-TTTGGACAATCCACGACGGTTGCAA 4278
||||| || ||||||||| |||||||||||| | |||||| || ||||||||||||| |
Sbjct 4083 TCAATATGGTGATATTCATCAAGAGATCAATG-CATTTGGAGAAACCACGACGGTTGCGA 4141
Query 4279 GATTCTTGAAAG-ACTATTTTGGATTTCATCATGACCTTTTGGCGGTTACCGCGGTTGTT 4337
||||||| | || ||||||| ||||| |||||||| | |||| || |||| || || ||
Sbjct 4142 GATTCTT-AGAGGACTATTTCGGATTCCATCATGATCATTTGACGATTACAGCCATTATT 4200
Query 4338 CAAATCGCTTTTCCCATTGCCTTAGCTTCTATGTTTGCATTCTTCGTGGGCAAACTCAAC 4397
| || || ||||| ||||| || ||| |||||| ||| ||||| || | ||||||||||
Sbjct 4201 CTCATTGCATTTCCAATTGCATTGGCTACTATGTATGCTTTCTTTGTTGCCAAACTCAAC 4260
Query 4398 TTCCAA 4403
|| |||
Sbjct 4261 TTTCAA 4266
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 172705266274
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5