BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G53510.1 Length=2654 Score E Sequences producing significant alignments: (Bits) Value Ahg485729 jgi|Araly1|485729|fgenesh2_kg.5__1721__AT3G53510.1 4067 0.0 Ahg482729 jgi|Araly1|482729|fgenesh2_kg.4__1789__AT2G37360.1 1624 0.0 > Ahg485729 jgi|Araly1|485729|fgenesh2_kg.5__1721__AT3G53510.1 Length=2610 Score = 4067 bits (2202), Expect = 0.0 Identities = 2496/2636 (95%), Gaps = 28/2636 (1%) Strand=Plus/Plus Query 13 ttttttACAGAGTACCTTAAGCCCCAAGAAAAAATACATACAATAACGGAAAAATGTGGA 72 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1 TTTTTTACAGAGTACCTTAAGCCCCAAGAAAAAATACATACAATAATGGAAAAATGTGGA 60 Query 73 TGGATTTGCCCAACTCCTCACCTACTCGTAACTTACAATTTATATACATACGAAAATATA 132 ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct 61 TGGATTTGCCCAACTCCTCACCTACTCTTAACTT-CAATGTATATACATACGAAAATATA 119 Query 133 AACAAAAGCTATGTACATGTAAATATGAAAAGCTACAAAACCCAGAACAACTCAAAGTTA 192 |||||||| ||||| ||||| || | ||||||||||||||||| ||||||||||||||| Sbjct 120 AACAAAAGATATGT--ATGTATATGTCAAAAGCTACAAAACCCAAAACAACTCAAAGTTA 177 Query 193 GATACTTAGAGATCACCAAACTAATTGACAAGTTTCTCCCTCATTCTCCCATCCAAATAT 252 ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| Sbjct 178 GATACTTAGAGATCACCAAACTAATTGACAAGTCTCTCTTTCATTCTTCCATCCAAATAT 237 Query 253 CCTATAAAGTCGATCAAAATTGTTCTGTGGGT-AAGACCTTTAGACACATTACCTGAGGC 311 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 238 CCTATAAAGTCGATCAAAATTGTTCTGTGGGTAAAGACCTTTAGACACATTACCTGAGGC 297 Query 312 CAAAACATTAACCAGACAATAATTCACGTGATGTCTGGTTTGTTCGGTATATTATCTCCG 371 |||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| Sbjct 298 CAAAACATTAACCAGACAATAATTTACATGATGTCTGGTTTGTTCGGTAAATTATCTCCG 357 Query 372 GCCAAACGGGTCAATGGCGATGGCCTCCCTCTGTTTTACAATATCCACAAGTCAGTGGAG 431 ||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 358 TCCAGACGGGTCAATGGCGATGACCTCCCTCTGTTTTACAATATCCATAAGTCAGTGGAG 417 Query 432 CTTCAGAGATGTCACAGAGACACTGCGCGGGTGTCTGTCACACTTGCAGAACTTCTCATG 491 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 418 CTTCAGAGATGTCAGAGAGACACGGCGCGGGTGTCTGTCACACTTGCAGAACTTCTCATG 477 Query 492 AGTGTGGAAGATGAGGGGGATGACCAGAGTCGGGCTATGGATATTGCGGTTGCGTCCAAT 551 |||||||||||||||||||||||||| ||||||||| ||||| |||| ||||| |||||| Sbjct 478 AGTGTGGAAGATGAGGGGGATGACCACAGTCGGGCTTTGGATGTTGCAGTTGCCTCCAAT 537 Query 552 TTCTGGTCCTCGGTTCCGTCTTCTCGTGTGCCTTCTTCTTCTCCGTTTGTTCTTTCCTTC 611 |||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 538 TTCTGGGCCTCGGTTCCGTCTTCTTGCGTGCCTTCTTCTTCTCCGTTTGTTCTTTCCTTC 597 Query 612 AAAGACTTGACTTACAGCGTGAAGATCAAGAAGAAGTTTAAGCCCTTTCCTTGTTGTGG- 670 |||||||||||||| || ||||||||| ||||||||||||||||||| || ||||| || Sbjct 598 AAAGACTTGACTTATAGTGTGAAGATCCAGAAGAAGTTTAAGCCCTTCCCCTGTTGCGGT 657 Query 671 GAATTCACCTTTTGATGGTAATGATATGGAGATGAATACTAAGGTGCTCCTGAATGGTAT 730 | |||| || || | ||||| |||||||||||||||||||||||| ||||||||||| Sbjct 658 G-ATTCGCC--TT--T--TAATGGTATGGAGATGAATACTAAGGTGCTGCTGAATGGTAT 710 Query 731 TTCTGGTGAAGCCCGGGAAGGAGAGATGATGGCTGTTCTTGGAGCGAGCGGGTCAGGGAA 790 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 711 TTCTGGTGAAGCTCGGGAAGGAGAGATGATGGCCGTTCTTGGAGCGAGCGGGTCAGGGAA 770 Query 791 ATCAACGCTTATCGATGCATTAGCCAATCGGATTTCAAAAGAGAGCCTACGCGGTGATAT 850 |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 771 ATCAACCCTTATCGATGCATTAGCCAATCGGATTTCAAAAGAGAGCCTACGTGGTGATAT 830 Query 851 TACTTTAAATGGGGAAGTTCTTGAATCTAGCCTGCATAAAGTCATATCAGCTTATGTGAT 910 ||||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 831 TACTTTAAACGGGGAAGTTCTTGAATCCAGCCTGCATAAAGTCATATCGGCTTATGTGAT 890 Query 911 GCAAGATGATCTTCTCTTCCCGATGCTCACCGTGGAAGAGACGTTGATGTTTTCTGCTGA 970 ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct 891 GCAAGATGATCTTCTGTTCCCGATGCTCACCGTGGAAGAAACTTTGATGTTTTCTGCTGA 950 Query 971 GTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAAGAAGGCACGGGTTCAAGCTCTGAT 1030 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 951 GTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAAGAAAGCACGGGTTCAAGCTCTGAT 1010 Query 1031 TGATCAGCTCGGCCTGAGGAACGCAGCAAAAACCGTGATCGGTGATGAGGGACACAGAGG 1090 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct 1011 TGATCAGCTCGGCCTGAGAAACGCAGCAAAAACCGTGATCGGTGATGAGGGGCACAGAGG 1070 Query 1091 TGTGTCTGGAGGAGAAAGGAGAAGGGTCTCAATTGGAACCGATATAATCCATGACCCGAT 1150 |||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| Sbjct 1071 TGTGTCTGGAGGAGAAAGGAGACGGGTGTCAATTGGAACCGATATAATCCATGATCCGAT 1130 Query 1151 TATTCTCTTTCTCGATGAGCCAACTTCTGGTCTTGACTCTACCAGTGCATACATGGTTGT 1210 ||| |||||||| ||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct 1131 TATCCTCTTTCTTGATGAGCCAACCTCAGGTCTCGACTCTACCAGTGCATACATGGTTGT 1190 Query 1211 CAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCATAGTTATCATGTCCATCCATCAGCC 1270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1191 CAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCATAGTTATCATGTCCATCCATCAGCC 1250 Query 1271 GAGTTACAGAATCTTGGGATTACTCGATAAGTTAATCTTCCTATCTAGGGGAAACACCGT 1330 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1251 GAGTTACAGAATCTTGGGCTTACTCGATAAGTTAATCTTCCTATCTAGGGGAAACACCGT 1310 Query 1331 TTACAGCGGCTCCCCGACACACCTCCCTCAGTTCTTCTCAGAATTCGGTCACCCAATTCC 1390 ||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||||||| Sbjct 1311 TTACAGCGGCTCCCCAACACATCTCCCTCGGTTCTTCTCGGAATTCGGTCACCCAATTCC 1370 Query 1391 TGAAAACGAGAACAAGCCGGAGTTTGCACTCGATCTTATCCGTGAGCTGGAAGATTCGCC 1450 |||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| || Sbjct 1371 TGAAAACGAGAACAAGCCAGAGTTCGCACTCGATCTTATCCGTGAGCTAGAAGATTCTCC 1430 Query 1451 AGAAGGAACGAAATCCTTAGTCGAGTTCCACAAGCAATGGCGAGCAAAGCAAACCTCAAG 1510 ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1431 AGAAGGAACCAAAGCCCTAGTCGAGTTCCACAAGCAATGGCGAGCAAAGCAAACCTCAAG 1490 Query 1511 CCAGAGCAGAAGAAACACCAATGTATCTCTCAAAGATGCAATCAGCGCAAGTATCTCGAG 1570 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1491 CCAGAGCAGAAGAAACACCAATGTATCTCTCAAAGATGCAATCAGCGCAAGTATCTCCAG 1550 Query 1571 AGGTAAGCTTGTCTCCGGAGCAACAAACCTAAGATCATCATTTCAAACCTTTGCAAACCC 1630 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1551 AGGCAAACTTGTCTCCGGAGCAACAAACCTAAGATCATCATTTCAAACCTTTGCAAACCC 1610 Query 1631 ATTCTGGACTGAAATGCTCGTAATTGGTAAACGATCTATACTAAACTCAAGAAGACAACC 1690 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1611 ATTCTGGACTGAAATGCTCGTGATTGGCAAACGATCTATACTAAACTCAAGAAGACAACC 1670 Query 1691 AGAGCTATTCGGAATCCGCCTAGGAGCTGTACTAGTCACCGGAATGATCCTAGCCACAAT 1750 ||||||||||||||| ||||| |||||||| |||||||||||||| |||||||||||||| Sbjct 1671 AGAGCTATTCGGAATGCGCCTCGGAGCTGTTCTAGTCACCGGAATCATCCTAGCCACAAT 1730 Query 1751 ATTCTGGAAACTAGACAATTCACCAAGAGGTATACAAGAACGCTTAGGGTTCTTCGCATT 1810 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1731 ATTCTGGAAACTAGACAATTCACCAAGAGGTATACAAGAACGTTTAGGGTTCTTCGCATT 1790 Query 1811 CGCAATGTCCACAACATTCTACACATGTGCAGAAGCAATACCAGTCTTTCTACAGGAACG 1870 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1791 CGCAATGTCCACAACATTCTACACCTGTGCAGAAGCAATACCAGTCTTTCTACAAGAACG 1850 Query 1871 TTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGCGATCATCATACGTCCTCGC 1930 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1851 CTACATATTCATGAGAGAAACAGCTTACAACGCTTACCGGCGATCATCATACGTCCTCGC 1910 Query 1931 TCACACAATAATCTCCATCCCTGCTCTCATAATCTTATCCGCCGCATTCGCCGCCTCAAC 1990 ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct 1911 TCACACAATAATCTCAATCCCTGCTCTAATAATCTTATCCGCCGCCTTCGCCGCCACAAC 1970 Query 1991 ATTCTCGGCCGTAGGACTCGCCGGAGGCTCCGAGGGATTCCTCTTCTTCTTCTTCACAAT 2050 ||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1971 ATTCTGGGCCGTAGGACTCGCCGGAGGCTCCGAAGGCTTCCTCTTCTTCTTCTTCACAAT 2030 Query 2051 CCTCACCGCGTTTTGGGCCGGAAGTTCCTTCGTGACGTTCTTATCCGGCGTAGTCTCACA 2110 |||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2031 CCTCACAGCGTTTTGGGCCGGAAGCTCCTTCGTGACATTCTTATCCGGCGTAGTCTCACA 2090 Query 2111 CGTGATGATCGGATTCACGGTGGTTGTAGCAATCCTCGCTTATTTCCTCCTCTTCTCCGG 2170 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2091 CGTGATGATCGGATTCACGGTGGTTGTAGCAATCCTCGCATATTTCCTCCTCTTCTCCGG 2150 Query 2171 ATTCTTCATCTCTAGAGATCGAATCCCACTCTACTGGATCTGGTTCCATTACCTCTCCCT 2230 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2151 ATTCTTCATCTCCAGAGATCGAATCCCAGTCTACTGGATCTGGTTCCATTACCTCTCCCT 2210 Query 2231 AGTGAAATACCCTTACGAAGGTGTTCTACAGAACGAATTCGAAGATCCGACGAAATGCTT 2290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2211 AGTGAAATACCCTTACGAAGGTGTTCTACAGAACGAATTCGAAGATCCGACGAAATGCTT 2270 Query 2291 CGTCAGAGGGATCCAGATGTTCGACAATTCGCCGCTGGGACAAGTTCCAACCGCCGTGAA 2350 | || | |||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 2271 CATCCGTGGGATCCAAATGTTCGACAATTCGCCGCTGGGACAAGTTCCGGCCGCCGTGAA 2330 Query 2351 AATCAGCCTCCTGAAGAGCATGAGCGGCGTTTTGGGGATCAACGTGACGGCGGAGACTTG 2410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2331 AATCAGCCTCCTGAAGAGCATGAGCGGCGTTTTGGGGATCAACGTGACGGCGGAGACTTG 2390 Query 2411 CGTAACGACGGGAATCGATATACTGAAACAGCAAGGAATCACGGAGATAAGCAAATGGAA 2470 |||||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||| Sbjct 2391 CGTAACGACGGGAATCGACATTCTGAAGCAACAAGGAATCACTGAGATTAGCAAATGGAA 2450 Query 2471 TTGCTTGTGGATCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTTCTACTTCACACT 2530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2451 TTGCTTGTGGATCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTTCTACTTCACACT 2510 Query 2531 CTTGATCGGAAGCAAGAACAAGCGTCGCTGATTTACAAAACAGAAAATTATTAGAGTAAC 2590 ||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 2511 CTTGATCGGAAGCAAGAACAAGCGTCGCTGATTTA------------TTA---GAGTAAC 2555 Query 2591 TTGACCAATGATTATGATGTACTTAATACTTATGATTAATACGAAATTGCATATGT 2646 | ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 2556 TA-ACCAATGATTATGATGTACTTAATACTTATGATTAATACAAAATTACATATGT 2610 > Ahg482729 jgi|Araly1|482729|fgenesh2_kg.4__1789__AT2G37360.1 Length=2366 Score = 1624 bits (879), Expect = 0.0 Identities = 1471/1750 (84%), Gaps = 67/1750 (4%) Strand=Plus/Plus Query 849 ATTACTTTAAATGGGGAAGTTCTTGAATCTAGCCTGCATAAAGTCATATCAGCTTATGTG 908 ||||| ||||| || |||||||||||||| || ||||| ||||||||||| ||||| ||| Sbjct 575 ATTACCTTAAACGGAGAAGTTCTTGAATCCAGACTGCAGAAAGTCATATCGGCTTACGTG 634 Query 909 ATGCAAGATGATCTTCTCTTCCCGATGCTCACCGTGGAAGAGACGT-TGATGTTTTCTGC 967 |||||||| || ||||||||||||||||| |||||||| || || | | ||||| ||||| Sbjct 635 ATGCAAGACGACCTTCTCTTCCCGATGCTTACCGTGGAGGAAAC-TCTAATGTTCTCTGC 693 Query 968 TGAGTTCAGGCTTCCAAGCTCGCTTTCTAAGAAGAAAAAGAAGGCACGGGTTCAAGCTCT 1027 ||||||||||| || | || || || |||||||| ||||| ||||||||||||||||| Sbjct 694 AGAGTTCAGGCTCCCTCGTTCACTCTCCAAGAAGAAGAAGAAAGCACGGGTTCAAGCTCT 753 Query 1028 GATTGATCAGCTCGGCCTGAGGAACGCAGCAAAAACCGTGATCGGTGATGAGGGACACAG 1087 |||||| || | ||||| |||| ||| |||||||||||||| |||||||| || ||||| Sbjct 754 GATTGACCAATTGGGCCTAAGGAGCGCTGCAAAAACCGTGATTGGTGATGAAGGCCACAG 813 Query 1088 AGGTGTGTCTGGAGGAGAAAGGAGAAGGGTCTCAATTGGAACCGATATAATCCATGACCC 1147 ||| ||||||||||||||||||||| |||| |||||||||| ||| |||||||||||||| Sbjct 814 AGGCGTGTCTGGAGGAGAAAGGAGACGGGTTTCAATTGGAAACGACATAATCCATGACCC 873 Query 1148 GATTATTCTCTTTCTCGATGAGCCAACTTCTGGTCTTGACTCTACCAGTGCATACATGGT 1207 ||||| |||||||||||||||||||| || || ||||||||||| || || |||||||| Sbjct 874 AATTATCCTCTTTCTCGATGAGCCAACCTCAGGGCTTGACTCTACGAGCGCCTACATGGT 933 Query 1208 TGTCAAAGTGCTTCAGAGAATCGCACAAAGCGGCAGCATAGTTATCATGTCCATCCATCA 1267 | ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 934 TATCAAAGTGCTTCAGAGAATCGCACAGAGTGGCAGCATAGTTATCATGTCCATCCATCA 993 Query 1268 GCCGAGTTACAGAATCTTGGGATTACTCGATAAGTTAATCTTCCTATCTAGGGGAAACAC 1327 ||| |||||||||||| |||| || || ||| ||||||||||||| |||||||||||||| Sbjct 994 GCCAAGTTACAGAATCATGGGTTTGCTAGATCAGTTAATCTTCCTTTCTAGGGGAAACAC 1053 Query 1328 CGTTTACAGCGGCTCCCCGACACACCTCCCTCAGTTCTTCTCAGAATTCG-GTCACCCAA 1386 ||||| |||||||| || ||||| |||||||||||||||||||| |||| | ||||| | Sbjct 1054 GGTTTATAGCGGCTCACCAACACATCTCCCTCAGTTCTTCTCAGAGTTCGAG-CACCCGA 1112 Query 1387 TTCCTGAAAACGAGAACAAGCCGGAGTTTGCACTCGATCTTATCCGTGAGCTGGAAGATT 1446 ||||||||||||||||||| | ||||| || |||||||| ||||| ||||||||| ||| Sbjct 1113 TTCCTGAAAACGAGAACAAAACAGAGTTCGCTCTCGATCTCATCCGAGAGCTGGAAAATT 1172 Query 1447 C-GCCAGAAGGAACGAAATC-CTTAGTCGAGTTCCACAAGCAATGGCGAGCAAAGCAAAC 1504 | | |||||||||| || || ||| ||||||||||||||| ||||||||||||||||| | Sbjct 1173 CTG-CAGAAGGAACCAAGTCACTT-GTCGAGTTCCACAAGAAATGGCGAGCAAAGCAAGC 1230 Query 1505 -C--T---CAAGCCAGAGC-A--G----AAG--AAACACCAATGTATCTCTCAAAGATGC 1549 | | ||||| | ||| | | ||| ||||| ||| | |||||||||||| || Sbjct 1231 GCAATCACCAAGCTATAGCAATGGTAACAAGAAAAACAACAACGCATCTCTCAAAGAAGC 1290 Query 1550 AATCAGCGCAAGTATCTCGAGAGGTAAGCTTGTCTCCGGAGCAACAAAC--CT-A--AGA 1604 || | ||| |||||||| ||||| || || ||||| |||||||||||| || | | | Sbjct 1291 GATAACCGCGAGTATCTCCAGAGGGAAACTCGTCTCTGGAGCAACAAACAACTCATCAAA 1350 Query 1605 --T-----CATCATTTCAAACCTTTGCAAACCCATTCTGGACT-GAAATGCTCGTAATTG 1656 | ||||||| ||||| || || || || ||||||| | |||||| |||| || | Sbjct 1351 CCTAACACCATCATTCCAAACATTCGCCAATCCTTTCTGGA-TCGAAATGATCGTCATAG 1409 Query 1657 GTAAACGATCTATACTAAACTCAA-GAAGACAACCAGAGCTATTCGGAATCCGCCTAGGA 1715 | ||||| ||||||||||||||| | |||||||||||||| ||||||| || |||||| Sbjct 1410 GCAAACGCGCTATACTAAACTCAATG-AGACAACCAGAGCTCCTCGGAATGCGACTAGGA 1468 Query 1716 GCTGTACTAGTCACCGGAATGATCCTAGCCACAATATTCTGGAAACTAGACAATTCACCA 1775 |||||| | || |||||||| |||||||||||||| ||| || ||||||||||| ||| Sbjct 1469 GCTGTAATGGTGACCGGAATCATCCTAGCCACAATGTTCACTAACCTAGACAATTCCCCA 1528 Query 1776 AGAGGTA-TACAAGAACGCT-TAGGGTTCTTCGCATTCGCAATGTCCACAACATTCTACA 1833 | ||| | ||||||||| | |||| |||||||||||||||||||||||||||||||||| Sbjct 1529 AAAGG-AGCACAAGAACG-TCTAGGATTCTTCGCATTCGCAATGTCCACAACATTCTACA 1586 Query 1834 CATGTGCAGAAGCAATACCAGTCTTTCTACAGGAACGTTACATATTCATGAGAGAAACAG 1893 |||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||| Sbjct 1587 CATGTGCAGAAGCAATCCCAGTGTTTCTAGAAGAACGTTACATATTCATGAGAGAAACAG 1646 Query 1894 CTTACAACGCTTACCGGCGATCATCATACGTCCTCGCTCACA-CAATAATCTCCATCCCT 1952 |||||||||| |||||| |||| || ||||||||| |||| | | |||||||| |||||| Sbjct 1647 CTTACAACGCCTACCGGAGATCCTCCTACGTCCTCTCTCA-ATCCATAATCTCAATCCCT 1705 Query 1953 GCTCTCATAATCTTA-TC-C-GCC-GCATTCGCCGCCTCAACATTCTCGGCCGTAGGACT 2008 || || ||||||| || | || || ||||||||| ||||||||| |||||| || || Sbjct 1706 GC-CT--TAATCTTCCTCTCCGCAAGC-TTCGCCGCCACAACATTCTGGGCCGTTGGTCT 1761 Query 2009 CGCCGGAGGCTCCGAG-GGATTCCTCTTCTTCTTCTTCACAATCCTCACCGCGTTTTGGG 2067 | ||||||||||| || || ||||||||||||||| ||||||||||| || | || |||| Sbjct 1762 CTCCGGAGGCTCC-AGTGGTTTCCTCTTCTTCTTCCTCACAATCCTCGCCTCATTCTGGG 1820 Query 2068 CCGGAAGTTCCTTCGTGACGTTCTTATCCGGCGTAGTCTCACA-CGTGATGATCGGATTC 2126 ||||||| |||||||| || ||| | |||||||| ||| | || ||| ||| |||||||| Sbjct 1821 CCGGAAGCTCCTTCGTAACATTCCTCTCCGGCGTCGTCGC-CAACGTAATGCTCGGATTC 1879 Query 2127 ACGGTGGTTGTAGCAATCCTCGCTTATTTCCTCCTCTTCTCCGGATTCTTCATCTCTAGA 2186 || | |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct 1880 ACAATCGTTGTAGCGATCCTCGCTTACTTCCTCCTCTTCTCCGGATTCTTCATCTCCAGA 1939 Query 2187 GATCGAATCCCACTCTACTGGATCTGGTTCCATTACCTCTCCCTAGTGAAATACCCTTAC 2246 ||||||||||| | |||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct 1940 GATCGAATCCCTGTTTACTGGCTCTGGTTCCATTACATCTCCTTAGTGAAATACCCTTAC 1999 Query 2247 GAAGGTGT-TCTACAGAACGAATTCGAAGATCCGACGAAATGCTTCGTCAGAGG-GATCC 2304 ||||| || | | ||||||||||||||||||||||||||||| ||||||||||| | || Sbjct 2000 GAAGGAGTGT-TGCAGAACGAATTCGAAGATCCGACGAAATGTTTCGTCAGAGGAGTTC- 2057 Query 2305 AGATGTTCGACAATTCGCCGCTGGGACAAGTT-CC-AACCGCCGTGAAAATCAGCCTCCT 2362 |||| || || ||||||||| |||| | ||| || ||| | ||||||| | | || | Sbjct 2058 AGATTTTTGATAATTCGCCGTTGGGGGA-GTTTCCGAAC-GACGTGAAATTGAATCTGTT 2115 Query 2363 GAAGAGCATGAGCGGCGTTTTGGGGATC-AACGTGACGGCGGAGACTTGCGTAACGACGG 2421 |||||| |||||||| |||||||||| | || ||||||||||||||||| || ||||||| Sbjct 2116 GAAGAGTATGAGCGGTGTTTTGGGGA-CGAATGTGACGGCGGAGACTTGTGTGACGACGG 2174 Query 2422 GAATCGATATACTGAAACAGCAAGGAATCACGGAGATAAGCAAATGGAATTGCTTGTGGA 2481 | || |||||| |||| |||||||| || ||||| | || ||||||||||| ||||||| Sbjct 2175 GGATTGATATATTGAAGCAGCAAGGGATTACGGATTTTAGTAAATGGAATTGTTTGTGGA 2234 Query 2482 TCACTGTAGCTTGGGGATTCTTCTTTAGGGTTCTCTTCTACTTCACACTCTTGATCGGAA 2541 | ||||| ||||||||||| |||||||||||| | || || ||||| | ||||| || | Sbjct 2235 TTACTGTTGCTTGGGGATTTTTCTTTAGGGTTTTGTTTTATTTCACTTTGTTGATTGGGA 2294 Query 2542 GCAAGAACAA 2551 |||||||||| Sbjct 2295 GCAAGAACAA 2304 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 100101163860 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5