BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G53680.1
Length=2526
Score E
Sequences producing significant alignments: (Bits) Value
Ahg898302 jgi|Araly1|898302|Al_scaffold_0005_2268 2331 0.0
Ahg482747 jgi|Araly1|482747|fgenesh2_kg.4__1807__AT2G37520.1 1596 0.0
> Ahg898302 jgi|Araly1|898302|Al_scaffold_0005_2268
Length=2505
Score = 2331 bits (1262), Expect = 0.0
Identities = 1499/1607 (93%), Gaps = 41/1607 (3%)
Strand=Plus/Plus
Query 57 GAAGAGAGACCGTCTTTGTTTTGAACAAGATAATCTAGACGAAGAAGAGCTTTATTCCTC 116
||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||
Sbjct 27 GAAGAGAGACCGTCTTTGTATTGAACAAGATAATCT--A-GAAGAAGAGCTTTATTCCTC 83
Query 117 CAACAAGAGACAAACCAAGGAACCTTCAAATGATGACATGAAGTCGGAGATATCAAACCC 176
|||||| |||||| ||||||||||||||||||||||||| | |||||| ||||| |||||
Sbjct 84 CAACAACAGACAAGCCAAGGAACCTTCAAATGATGACATTAGGTCGGAAATATCTAACCC 143
Query 177 AGTCCCGTCTCCGGTGGTGGATAACGCCTCTAGTTTTCGCGATATCACTAGTAATCCGGC 236
||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 144 TGTCGCGTCTCCAGTGGTGGATAACGCCTCTAGTTTTCGTGATATCACTAGTAATCCGGC 203
Query 237 TAAATCGAGTTCTGGTGACCGTGTCGGGTCTTGTTCTGGTTCCTATGAGACTA-TAACTG 295
|||||||||||||||||| ||||| |||||||||||||||||||||||| ||| | | ||
Sbjct 204 TAAATCGAGTTCTGGTGATCGTGTTGGGTCTTGTTCTGGTTCCTATGAGGCTACT-AGTG 262
Query 296 ATGAGAAACACAGTGAATACTGTTCAT--C--GC---TAGCT---AAT--AGTGATGCTG 343
||||||||| ||||||||||||||||| | || ||||| ||| ||||||||||
Sbjct 263 ATGAGAAACGCAGTGAATACTGTTCATCGCTAGCTGATAGCTCGCAATCGAGTGATGCTG 322
Query 344 TACCGTCAAGTTTCGAAAGGGAGATTCCAAAGCATCTTAGCACAACTGGGATAACGAAAA 403
||||||||||||| | | ||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 323 TACCGTCAAGTTTTGTACGGGAGATTCCAAAACATCTTAGCACTACTGGGATAACGAAAA 382
Query 404 TCACATTTAAGCTCAGTAAACGAAATGAGGATTTCTGTGATTTGCCCATGATTCAAGAGC 463
|||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 383 TCACGTTTAAGCTCAGTAAACGAAATGAGGATTTTTGTGATTTGCCTATGATTCAAGAGC 442
Query 464 ATACTTGGGAGGGTTATCCTTCCAATGTAGCTTCTTCAACTTTAGGTGTGAAAATGTTGA 523
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 443 ATACTTGGGAGGGTTCTCCTTCGAATGTAGCTTCTTCAACTTTAGGTGTGAAAATGTTGG 502
Query 524 AGAAGATTGACTCTACCAAC-TTCCTATCTAATGTGAAGAAGCTATTGGGGACGGGGATT 582
| |||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||
Sbjct 503 ACAAGATTGACTCTACCAACTTTCC-ATCTAATGTGAAGAAGCTATTGGCGACGGGGATC 561
Query 583 CTCGATGGTGCTCGGGTGAAGTACCTTTCAACCTCAGCTGCTAGAGAGCTTCAAGGGATA 642
||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||
Sbjct 562 CTCGATGGTGCTCGGGTGAAGTACCTTTCAATCTCACCTGCAAGAGAGCTTCAAGGGATA 621
Query 643 ATCCACTCGGGTGGGTATTTGTGTGGCTGTACTG-CGTGCGATTTCTCGAAAGTTCTAGG 701
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 622 ATCCACTCGGGTGGGTATTTGTGTGGCTGTACTGTC-TGCGATTTCTCGAAAGTTCTAGG 680
Query 702 TGCATATGAGTTCGAGCGGCATGCTGGTGGAAAAACAAAACACCCTAATAATCACATATA 761
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 681 TGCCTATGAGTTCGAGCGGCATGCTGGTGGAAAAACAAAACACCCTAATAATCACATATA 740
Query 762 TCTGGAGAATGGACGGCCGGTTTATAACGTAATTCAAGAGCTGAGGATTGCTCCCCCTGA 821
||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 741 TCTGGAGAACGGACGGCCGGTTTATAACATAATTCAAGAGCTGAGGGTTGCTCCCCCTGA 800
Query 822 CGTTTTGGAGGAGGTGATAAGGAAAGTGGCTGGTTCTGCTCTGAGCGAGGAGGGTTTTCA 881
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 801 CGTTTTGGAGGAGGTGATAAGGAAAGTGGCTGGTTCTGCTCTGAGCGAGGAGGGATTTCA 860
Query 882 GGCTTGGAAAGGAAGTTTCCAGCAAGATAAGAATATGACTGAAGATGATAGCAACCATAT 941
||||||||||| |||||| | | | | | |||||||||||||||||||
Sbjct 861 GGCTTGGAAAGAAAGTTT-C--C-----------A-G-C--AAGATGATAGCAACCATAT 902
Query 942 CATGGATCATTCGTTTCAATCACTTGTTAGTTATCCTGGTTCTGGTTGGTCTCTTGATGA 1001
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 903 CATGGATTATTCGTTTCAATCCCTTGTTAGTTATCCTGGTTCTGGTTGGTCTCTTGATGA 962
Query 1002 GAGTCAAAGCTCTACTCCATGTTTTCCAGAGGACAATTATTTTAGAGAGAAAATCTGTAC 1061
|||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||
Sbjct 963 GAGTCAAAGCTCTACTCCATATTTTCCGGAGAACAATTATTTTAGAGAGAAAATCAGTAC 1022
Query 1062 AAAGGACACTCGACACGCACATAAGCCAAAAGCTAAGAAGCTTACCTCTCATATGTTTGG 1121
||||||||| | ||||| ||||||||||||||| |||||| |||||||||||||||||||
Sbjct 1023 AAAGGACACACCACACGAACATAAGCCAAAAGCAAAGAAGGTTACCTCTCATATGTTTGG 1082
Query 1122 TATGGGTTGCCATAAGAAAGTTTCTGGAGGCGGTAAATGGAAGAGGGACAATGATTTACA 1181
|||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||
Sbjct 1083 TATGGGTTGCCATAAGAAAGCTGCCGGAGGCGGTAAATGGAAGAGGGACAATGATTTACA 1142
Query 1182 TCGGTTGCTGTTTTTGCCAAATGGGCTACCGGATGGGACTGAATTGGCTTACTATGTGAA 1241
||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 1143 CCGGTTGCTGTTTTTGCCAAATGGGCTACCAGATGGGACTGAATTGGCTTACTTTGTGAA 1202
Query 1242 ATCACAGAAACTACTGCAGGGTTACAAGCAAGGAAGTGGTATAGTATGTAGCTGCTGCGA 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1203 ATCACAGAAACTACTGCAGGGTTACAAGCAAGGAAGTGGTATAGTATGTAGCTGCTGCGA 1262
Query 1302 CACAAAGATTAGTCCTTCACAATTCGAAGCACATGCTGGAATGGCTGGTAGACGACAACC 1361
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 CACAGAGATTAGTCCTTCACAATTCGAAGCACATGCTGGAATGGCTGGTAGACGACAACC 1322
Query 1362 TTATCGTCGA-ATCCACATATCTTCCGGATTGTCATTGCATGATATAGCTGTGTCATTGG 1420
|||||||| | |||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct 1323 TTATCGTC-ATATCCACATTTCTTCTGGATTGTCATTGCATGATATAGCCATGTCATTGG 1381
Query 1421 CGGATGGGGGCCATGTCATTACAACTGGTGACAGTGATGACATGTGTTCTATTTGTGGCA 1480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1382 CGGATGGGGGCCATGTCATTACAACTGGTGACAGTGATGACATGTGTTCTATTTGTGGCG 1441
Query 1481 ATGGTGGAGATTTGCTACTTTGTGCTGGATGTCCTCAAGCATTTCATACAGCATGCTTGA 1540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1442 ATGGTGGAGATTTGCTACTCTGTGCTGGATGTCCTCAAGCATTTCATACAGCATGCTTGA 1501
Query 1541 AATTTCAATCAATGCCTGAAGGTACTTGGTACTGTTCAAGCTGCAATGATGGACCTACCT 1600
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1502 AATTTCAATCAATGCCTGAAGGTACTTGGTACTGTTCAAGGTGCAATGATGGACCTACCT 1561
Query 1601 CTTGTAAAATAGCCACTGCTAGTGATCCCAATTTAAAACCCATAGTT 1647
||||||||| ||||||||||| |||||||||||||||| ||||||||
Sbjct 1562 CTTGTAAAACAGCCACTGCTACTGATCCCAATTTAAAATCCATAGTT 1608
Score = 1363 bits (738), Expect = 0.0
Identities = 797/826 (96%), Gaps = 1/826 (0%)
Strand=Plus/Plus
Query 1702 TTCTG-CAGGTCGCATGATTTTAGCATTGGGAAATTTGATGATAGGACAGTTATTCTCTG 1760
||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 TTCTGATAGGTCACTTGATTTTAGCATTGGGAAATTTGATGATAGGACAGTTATTCTCTG 1739
Query 1761 TGACCAGTGCGAGAAAGAGTACCACGTCGGTTGTCTCAGGGAAAATGAGCTTTGTGATTT 1820
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1740 TGACCAGTGTGAGAAAGAGTACCACGTCGGTTGTCTCAGGGAAAATGATCTTTGTGATTT 1799
Query 1821 GAAAGGAATCCCCCAAGATAAATGGTTCTGCTGTAGTGACTGCAGCAGGATTCACAGGGT 1880
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1800 GAAAGGTATCCCCCAAGATAAATGGTTCTGCTGTAGTGACTGCAGCAGGATTCACACGGC 1859
Query 1881 TCTTCAAAGCTCTGCTTCATGTGGGCCACAAACTATTCCCACGCTTTTGTTAGACACGAT 1940
|||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||
Sbjct 1860 TCTTCAAAGCTCTGCTTCGTGTGGGCCACAAACTATTCCTACGGTTTTGTTAGACACGAT 1919
Query 1941 AAGCAGAAAGTACAGAGAAAAAGGAATATATATTGACAATGGAAATACTGTGGAGTGGAG 2000
||||||||| ||||||||||||||||||| ||||||||||||| |||||||||| |||||
Sbjct 1920 AAGCAGAAAATACAGAGAAAAAGGAATATGTATTGACAATGGAGATACTGTGGAATGGAG 1979
Query 2001 GATGCTTAGTGGAAAAAGTCGATACCCAGAGCATCTACCCTTACTTTCACGAGCAGCTAC 2060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 GATGCTTAGTGGAAAAAGTCGATACCCAGAGCATCTACCCTTACTTTCACGAGCAGCTAC 2039
Query 2061 TATTTTCAGGGAGTGTTTTGATCCCATTGTGGCAAAGTCTGGTCGTGATCTCATTCCTGT 2120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 TATTTTCAGGGAGTGTTTTGATCCCATTGTGGCAAAGTCTGGTCGTGATCTCATTCCTGT 2099
Query 2121 CATGGTCTATGGGAGAAACATATCTGGCCAGGAGTTTGGAGGAATGTACTGCTTGGTCCT 2180
|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 2100 CATGGTCTATGGGAGAAATATATCAGGCCAGGAGTTTGGAGGAATGTACTGCTTGGTCCT 2159
Query 2181 GATGGTGAATTCCCTAGTTGTTTCTGCCGCGCTGCTTAGGATATTTGGTCAGAAAGTTGC 2240
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2160 GATGGTGAATTCCCTTGTTGTTTCTGCCGCGCTGCTTAGGATATTTGGTCAGAAGGTTGC 2219
Query 2241 AGAACTTCCTATTGTAGCTACAAGCCGAGAGTATCAGGGAAGGGGCTACTTTCAAGGGCT 2300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 AGAACTTCCTATTGTAGCTACAAGCCGAGAGTATCAGGGAAGGGGCTACTTTCAAGGGCT 2279
Query 2301 GTTTGCTTGCGTTGAGAATCTTCTTTCCTCTCTGAATGTTGAGAACTTGCTTCTCCCAGC 2360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2280 GTTTGCTTGCGTTGAGAATCTTCTTTCCTCTCTGAATGTTGAGAACTTGATTCTCCCAGC 2339
Query 2361 AGCTGAAGAAGCTGAGTCTATCTGGACAAATAAATTTGGATTCACAAAGATGACTGAACA 2420
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 2340 AGCTGAAGAAGCTGAGTCTATCTGGACAAAGAAATTTGGCTTCACAAAGATGACTGAACA 2399
Query 2421 TCGATTACAGAGGTACCAGAGAGAAGTGCAACTAACAATCTTCAAGGGAACATCGATGCT 2480
||||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct 2400 TCGATTACAGAAGTACCAGAGAGAAGTGCAACTTACAATATTCAAAGGAACATCGATGCT 2459
Query 2481 CGAGAAGAAAGTACCGAGTTTTTCAGAATCAACTTCAATCATCTGA 2526
|||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct 2460 CGAGAAGAAAGTACCGAGGTTTTCAGAATCAACTTCACTCATCTGA 2505
> Ahg482747 jgi|Araly1|482747|fgenesh2_kg.4__1807__AT2G37520.1
Length=2846
Score = 1596 bits (864), Expect = 0.0
Identities = 1332/1554 (86%), Gaps = 47/1554 (3%)
Strand=Plus/Plus
Query 970 AGTTATCCTGGTTCTGGT--TGG---T-CTCTTGATGAGAGTCAAAG-CTCTACTCCATG 1022
||||||| |||||||||| ||| | ||||||||| ||||| || || |||||||||
Sbjct 1077 AGTTATCTTGGTTCTGGTACTGGCCCTGGTCTTGATGAAAGTCAGAGCCT-TACTCCATG 1135
Query 1023 TTTTCCAGAGGACAATTATTTTAGAGAGAAAATC-TGTACAAAGGACAC--TCGA-CACG 1078
| | ||| || |||||||| |||||||| | | | |||||||||| | || | |
Sbjct 1136 CTCTGTGGAGAACCATTATTTTCCAGAGAAAA-CATATGCAAAGGACACATTAGATGA-G 1193
Query 1079 CACATAAGCCAAAAGCTAAGAAGCTTACCTCTCATATGTTTGGTATGGGTTGCCATAAGA 1138
| | |||| | ||| ||||||||||| |||||| | | ||||| ||||||||||||||
Sbjct 1194 C-C-GAAGCGGATAGCAAAGAAGCTTACTTCTCATGTATCTGGTACGGGTTGCCATAAGA 1251
Query 1139 AAGTTTCTGGAGGCGGTAAAT-GGAAGAGGGACAATGATTTACATCGGTTGCTGTTTTTG 1197
||||||||| ||| | ||| | ||||||||||||||||||||||||||||||||| ||
Sbjct 1252 AAGTTTCTGAAGGAAG-CAATAGAAAGAGGGACAATGATTTACATCGGTTGCTGTTTATG 1310
Query 1198 CCAAATGGGCTACCGGATGGGACTGAATTGGCTTACTATGTGAAATCACAGAAACTACTG 1257
|| ||||| || || || ||||||||||||||||||||||||||| | |||||||||||
Sbjct 1311 CCTAATGGACTTCCAGACGGGACTGAATTGGCTTACTATGTGAAAACGCAGAAACTACTA 1370
Query 1258 CAGGGTTACAAGCAAGGAAGTGGTATAGTATGTAGCTGCTGCGA-CACAAAGATTAGTCC 1316
|||||||||||||||||||||||||||||||||||||||||| | || | ||||||||||
Sbjct 1371 CAGGGTTACAAGCAAGGAAGTGGTATAGTATGTAGCTGCTGC-AGCAGAGAGATTAGTCC 1429
Query 1317 TTCACAATTCGAAGCACATGCTGGAATGGCTGGTAGACGACAACCTTATCGTCGA-ATCC 1375
||| ||||| ||||| |||||||||||||||| |||||||||||||||||||| | |||
Sbjct 1430 TTCGCAATTTGAAGCGCATGCTGGAATGGCTGCTAGACGACAACCTTATCGTC-ATATCT 1488
Query 1376 ACATATCTTCCGGATTGTCATTGCATGATATAGCTGTGTCATTGGCGGATGGGGGCCATG 1435
||| ||||| ||||||||||||||||||||||| ||||| |||| || || ||||
Sbjct 1489 TCATTTCTTCTGGATTGTCATTGCATGATATAGCCATGTCACTGGCCAAT---GGACATG 1545
Query 1436 TCATTACAACTGGTGACAGTGATGACATGTGTTCTATTTGTGGCAATGGTGGAGATTTGC 1495
|||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||
Sbjct 1546 TCATTACAACTGGTGACAGTGATGACATGTGTTCCATTTGTGGGGATAGTGGAGATTTGC 1605
Query 1496 TACTTTGTGCTGGATGTCCTCAAGCATTTCATACAGCATGCTTGAAATTTCAATCAATGC 1555
||||||||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct 1606 TACTTTGTGCTGGATGTCCTCAAGCATTTCATACAGCTTGTTTGAAATTTCAGTCTATGC 1665
Query 1556 CTGAAGGTACTTGGTACTGTTCAAGCTGCAATGATGGACCTACCTCTTGTAAAATA-GCC 1614
|||||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||
Sbjct 1666 CTGAAGGTACTTGGTACTGTTCGAGCTGCAATGATGGACCTATTTCTTGTAAAA-AGGCT 1724
Query 1615 ACTGCTAGTGAT-C--C---CAA-TTTAAAACCCATAGTTATAAGACTGACAAGAGTTGT 1667
||||||| |||| | | ||| | | || ||||||||||||||| ||||||| ||
Sbjct 1725 ACTGCTACTGATCCTTCTGGCAACGCT-AGGCCTATAGTTATAAGACTGTCAAGAGTCGT 1783
Query 1668 TAAAGCACCAGAAAGCGAAATTGGTGGTTGCGTGTTCTGCAGGTCGCATGATTTTAGCAT 1727
||||| ||||||||||||||||| || || |||||||||||||| ||||||||||||||
Sbjct 1784 GAAAGCGCCAGAAAGCGAAATTGGGGGCTGTGTGTTCTGCAGGTCCCATGATTTTAGCAT 1843
Query 1728 TGGGAAATTTGATGATAGGACAGTTATTCTCTGTGACCAGTGCGAGAAAGAGTACCACGT 1787
||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct 1844 TGGAAAATTTGATGATAGGACTGTTATTCTCTGTGACCAGTGTGAGAAAGAGTACCATGT 1903
Query 1788 CGGTTGTCTCAGGGAAAATGAGCTTTGTGATTTGAAAGGAATCCCCCAAGATAAATGGTT 1847
||||| || ||||| |||| ||| ||||||||||||| |||||| || || ||||||||
Sbjct 1904 TGGTTGCCTGAGGGAGAATGGGCTCTGTGATTTGAAAGAAATCCCGCAGGAGAAATGGTT 1963
Query 1848 CTGCTGTAGTGACTGCAGCAGGATTCACAGGGTTCTTCA-AAGCTCTGCTTCATGTGGGC 1906
||||||||| ||||||||||||||||||| || |||| || |||| ||| |||||||
Sbjct 1964 CTGCTGTAGCGACTGCAGCAGGATTCACACGGCAGTTCAGAA-TTCTGTTTCTTGTGGGC 2022
Query 1907 CACAAACTATTCCCACGCTTTTGTTAGACACGATAAGCAG-AAAGTACAGAGAAAAAGGA 1965
||||||||||||| || | ||||||||||| |||| |||| |||| ||||||||||||||
Sbjct 2023 CACAAACTATTCCTACTCCTTTGTTAGACATGATATGCAGAAAAG-ACAGAGAAAAAGGA 2081
Query 1966 ATATATATTGACAATGGAAATACT-GTGGAGTGGAGGATGCTTAGTGGAAAAAGTCGATA 2024
|||| || || ||||| ||| | || || ||||| || ||||||||||||||||||||
Sbjct 2082 ATATTTACCGATAATGGGGATA-TAGTCGAATGGAGAATACTTAGTGGAAAAAGTCGATA 2140
Query 2025 CCCAGAGCATCTACCCTTACTTTCACGAGCAGCTACTATT-TTCAGGGAGTGTTTTGATC 2083
|||||||||||| || || ||||||||||| ||| || | |||||||||||||||||||
Sbjct 2141 CCCAGAGCATCTGCCTTTGCTTTCACGAGCGGCTG-TAATCTTCAGGGAGTGTTTTGATC 2199
Query 2084 CCATTGTGGCAAAGTCTGGTCGTGATCTCATTCCTGTCATGGTCTATGGGAGAAACATAT 2143
||||||| ||||||||||| || |||||||||||||||||||| ||||||||||| ||||
Sbjct 2200 CCATTGTTGCAAAGTCTGGCCGCGATCTCATTCCTGTCATGGTGTATGGGAGAAATATAT 2259
Query 2144 CTGGCCAGGAGTTTGGAGGAATGTACTGCTTGGTCCTGATGGTGAATTCCCTAGTTGTTT 2203
|||||||||||||||||||||||||||| ||||||||||| || ||||| || |||||||
Sbjct 2260 CTGGCCAGGAGTTTGGAGGAATGTACTGTTTGGTCCTGATTGTAAATTCTCTTGTTGTTT 2319
Query 2204 CTGCCGCGCTGCTTAGGATATTTGGTCAGAAAGTTGCAGAACTTCCTATTGTAGCTACAA 2263
|||| |||||||| ||||||||||||||| ||||||| ||||||||||||||||| || |
Sbjct 2320 CTGCTGCGCTGCTGAGGATATTTGGTCAGCAAGTTGCTGAACTTCCTATTGTAGCGACTA 2379
Query 2264 GCCGAGAGTATCAGGGAAGGGGCTACTTTCAAGGGCTGTTTGCTTGCGTTGAGAATCTTC 2323
|||||||||| || |||||||||||||| |||||||||| |||||| || ||||||||||
Sbjct 2380 GCCGAGAGTACCAAGGAAGGGGCTACTTCCAAGGGCTGTATGCTTGTGTAGAGAATCTTC 2439
Query 2324 TTTCCTCTCTGAATGTTGAGAACTTGCTTCTCCCAGCAGCTGAAGAAGCTGAGTCTATCT 2383
|||| ||| | |||||||||||| || | || || |||||||||||||| |||||||| |
Sbjct 2440 TTTCTTCTTTAAATGTTGAGAACCTGGTCCTTCCGGCAGCTGAAGAAGCAGAGTCTATAT 2499
Query 2384 GGACAAATAAATTTGGATTCACAAAGATGACTGAACATCGATTACAG-AGGTACCAGAGA 2442
||||||| || ||||| || ||||||||| |||| || | ||| ||| || ||||| | |
Sbjct 2500 GGACAAAGAAGTTTGGCTTTACAAAGATGTCTGACCAGCAATTGCAGGAG-TACCAAA-A 2557
Query 2443 G-AAGTGCAACTAACAATCTTCAAGGGAACATCGATGCTCGAGAAGAAAGTACC 2495
| ||||||| || ||||| ||||| ||||| || ||||| ||||||||||||||
Sbjct 2558 GGAAGTGCAGCTTACAATATTCAAAGGAACCTCAATGCTGGAGAAGAAAGTACC 2611
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95225612500
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5