BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G53690.1 Length=1193 Score E Sequences producing significant alignments: (Bits) Value Ahg938278 jgi|Araly1|938278|scaffold_502469.1 1465 0.0 Ahg922479 jgi|Araly1|922479|scaffold_103760.1 634 0.0 Ahg925203 jgi|Araly1|925203|scaffold_200764.1 610 7e-174 Ahg952076 jgi|Araly1|952076|scaffold_35500001.1 597 6e-170 Ahg946986 jgi|Araly1|946986|scaffold_703215.1 597 6e-170 Ahg891370 jgi|Araly1|891370|Al_scaffold_0007_3356 569 1e-161 Ahg887317 jgi|Araly1|887317|Al_scaffold_1046_1 499 2e-140 Ahg924918 jgi|Araly1|924918|scaffold_200479.1 492 3e-138 Ahg908029 jgi|Araly1|908029|Al_scaffold_0002_1110 276 3e-73 > Ahg938278 jgi|Araly1|938278|scaffold_502469.1 Length=1009 Score = 1465 bits (793), Expect = 0.0 Identities = 944/1015 (93%), Gaps = 17/1015 (2%) Strand=Plus/Plus Query 1 CTAATTAGAATCATTTTTGAAATGGCGACACAGTCAGTTAACGCAGTGATCGTTGATCTT 60 |||||| |||||| ||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct 1 CTAATTGGAATCA-TTTTGAAATGGCGACACAGTCTGTTAACGCGGTGATCGTTGATCTT 59 Query 61 CCCGGAGATGTAAACGACGACGGCGATAATTCCGATTGTTTCATCTTCTCCACTC-CTCC 119 ||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| Sbjct 60 CCCGGAGATGTAAACGACGACGGCGATAATTCCGATTGTTTCATCTTCTCCTC-CACTCC 118 Query 120 TCTCTCTGCACGTGGTTCCACAAAGCGTGATGCTATTTCCGTTGAGAATTACGATCGTGA 179 ||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 119 TCTATCTGCTCGTGGTTCCACCAAGCGTGACGCTATTTCCGTTGAGAATTACGATCGTGA 178 Query 180 TCGGAAACTTCAACGTCTCTGGGTCTACCCTCCTCACAAAACCGTAATCAAGTCAGAATC 239 ||| ||||||||||||||||||||||||||||||||||| | | |||||| |||||||| Sbjct 179 TCGCAAACTTCAACGTCTCTGGGTCTACCCTCCTCACAACAGAGCAATCAAATCAGAATC 238 Query 240 TCCAATTTACATAGATCTTGATCTTTACGATGATGAAGACGATGATATCAGAATCCTCTG 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 TCCAATTTACATAGATCTTGATCTTTACGATGATGAAGACGATGATATCAGAATCCTCTG 298 Query 300 TTTCGCACCACCAAT-C-CA-C--A----GAGAAAAGGGTCAGTCTTCTTCGTCAAAGAC 350 |||| |||||||||| | || | | ||||||||||||||||||||||||| ||| Sbjct 299 TTTCCCACCACCAATCCACACCAAATCTTTAGAAAAGGGTCAGTCTTCTTCGTCAGCGAC 358 Query 351 GGCGACTTTCGACTGTGAGATATGTGTTGATTCAAAATCCATAATTGAGTCGTTTCGTAT 410 || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct 359 GGTTACTTTCGACTGTGAGATATGTGTTGAAACAAAATCCATAATTGAATCGTTTCGTAT 418 Query 411 CGGTGGATGCTCTCACTTCTACTGCAACGACTGTGTTTCGAAATATATAGCAGCTAAATT 470 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 419 CGGTGGATGCTCTCACTTCTACTGCAACGATTGTGTCTCGAAATATATAGCAGCTAAATT 478 Query 471 ACAAGACAACATTCTCTCAATCGAATGTCCTGTCTCTGGTTGTTCTGGTCGGCTCGAGCC 530 |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||| Sbjct 479 ACAAGACAACATTCTCTCGATCGAGTGTCCTGTCTCTGGTTGCTCTGGTCGGCTCGAGCC 538 Query 531 AGATCAGTGTCGTCAGATTTTGCCTAA-AGAGGTTTTTGATCGGTGGGGTGATGCTTTGT 589 |||||||||||||| || ||||| || ||||||||||||||||||||||||||||||| Sbjct 539 TGATCAGTGTCGTCAAATCTTGCC-AAGGGAGGTTTTTGATCGGTGGGGTGATGCTTTGT 597 Query 590 GTGAAGCAGTAGTGATGCGTTCGAAGAAATTCTACTGTCCTTACAAGGATTGCTCTGCTT 649 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 598 GTGAAGCAGTAGTGATGCGTTCGAAGAGATTCTACTGTCCTTACAAGGATTGCTCTGCTT 657 Query 650 TGGTTTTCTTAGAAGAGAGTGAAGTAAAGATGAAAGATTCGGAGTGTCCTCATTGTCATA 709 || ||||| | || ||||||||||| ||||||||| || |||||||||||||| |||| Sbjct 658 TGCTTTTCATGGACGAGAGTGAAGT---GATGAAAGACTCAGAGTGTCCTCATTGCCATA 714 Query 710 GAATGGTGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGAGATGACTTGCGAGGAGTTTC 769 ||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 715 GAATGGTGTGTGTAGAGTGTGGGACTAAGTGGCATCCGGAGATGACTTGTGAGGAGTTTC 774 Query 770 AGAAGCTAGCGGCGAACGAGAGAGGAAGAGATGATATTTTGCTTGCGACGATGGCAAAGC 829 |||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 775 AGAATCTAGCGGAGAACGAAAGAGGAAGAGATGATATTTTGCTTGCGACGATGGCAAAGA 834 Query 830 AAAAGAAATGGAAAAGATGTCCTTCTTGCAAATTCTATATTGAGAAATCTCAGGGTTGCT 889 |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct 835 AAAAGAAATGGAAAAGATGTCCTTCTTGCAAATTCTATATTGAGAAGTCTCATGGTTGCT 894 Query 890 TATACATGAAGTGCAGGTGTGGGTTGGCTTTTTGCTACAACTGTGGAACTCCATCGAGGG 949 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct 895 TATACATGAAGTGCAGGTGTGGGTTGGCTTTTTGCTACAACTGTGGAACGCCATCCAGGG 954 Query 950 ACCATACTCATTATTGTTATAATTGTAAGCGTTGATATTTAGCATCAGCATTTCT 1004 ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct 955 ACCATTCTCATTATTGTTATAATTGTAAGCGTTGATGTTTAGCATCAGTATTTCT 1009 > Ahg922479 jgi|Araly1|922479|scaffold_103760.1 Length=656 Score = 634 bits (343), Expect = 0.0 Identities = 450/500 (90%), Gaps = 14/500 (3%) Strand=Plus/Plus Query 418 TGCTCTCACTTCTACTGCAACGACTGTGTTTCGAAATATATAGCAGCTAAATTACAAGAC 477 ||||||||||||||||||||||| ||||| |||||||||||||| || |||||||||||| Sbjct 109 TGCTCTCACTTCTACTGCAACGATTGTGTCTCGAAATATATAGCTGCAAAATTACAAGAC 168 Query 478 AACATTCTCTCAATCGAATGTCCTGTCTCTGGTT------GTTCTGGTCGGCTCGAGCCA 531 ||||| ||||||||||| |||| ||||||||||| | |||||||||||||||||| Sbjct 169 AACATCCTCTCAATCGAGTGTCTTGTCTCTGGTTGCGAGAGCTCTGGTCGGCTCGAGCCA 228 Query 532 GATCAGTGTCGTCAGATTTTGCCTAA-AGAGGTTTTTGATCGGTGGGGTGATGCT-TTGT 589 ||| |||||||||| || ||||| || |||||||||||||| ||||||||||||| || | Sbjct 229 GATAAGTGTCGTCAAATCTTGCC-AAGAGAGGTTTTTGATCAGTGGGGTGATGCTCTT-T 286 Query 590 GTGAAGCAGTAGTGATGCGTTCGAAGAAATTCTACTGTCCTTACAAGGATTGCTCTGCTT 649 |||||||||| |||||||||| |||| ||| || |||||||| |||||||||||||||| Sbjct 287 CTGAAGCAGTATTGATGCGTTCAAAGAGATTATATTGTCCTTATAAGGATTGCTCTGCTT 346 Query 650 TGGTTTTC-TTAGAAGAGAGTGAAGTAAAGATGAAAGATTCGGAGTGTCCTCATTGTCAT 708 || ||||| || || ||||||||||| ||||||||||||||||||||| ||||||| ||| Sbjct 347 TGCTTTTCATT-GACGAGAGTGAAGTGAAGATGAAAGATTCGGAGTGTTCTCATTGCCAT 405 Query 709 AGAATGGTGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGAGATGACTTGCGAGGAGTTT 768 |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 406 AGAATGGTGTGTGTAGAGTGTGGGACTAAGTGGCATCCGGAGATAACTTGCGAGGAGTTT 465 Query 769 CAGAAGCTAGCGGCGAACGAGAGAGGAAGAGATGATATTTTGCTTGCGACGATGGCAAAG 828 ||||||||||| | ||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 466 CAGAAGCTAGCAGAAAACGAAAGAGGAAGAGATGATATTTTGCTCGCGACGATGGCAAAG 525 Query 829 CAAAAGAAATGGAAAAGATGTCCTTCTTGCAAA-TTCTATATTGAGAAATCTCAGGGTTG 887 |||||||||||||||||||| |||||||||| || ||||||||||| ||||||||||| Sbjct 526 AAAAAGAAATGGAAAAGATGTTATTCTTGCAAACTT-TATATTGAGAAGTCTCAGGGTTG 584 Query 888 CTTATACATGAAGTGCAGGT 907 |||||||||||||||||||| Sbjct 585 CTTATACATGAAGTGCAGGT 604 > Ahg925203 jgi|Araly1|925203|scaffold_200764.1 Length=710 Score = 610 bits (330), Expect = 7e-174 Identities = 442/494 (89%), Gaps = 16/494 (3%) Strand=Plus/Plus Query 426 CTTCTACTGCAACGACTGTGTTTCGAAATATATAGCAGCTAAATTACAAGACAACATTCT 485 ||||||||||||||| ||||| |||||||||||||| || ||||||||||||||||| || Sbjct 75 CTTCTACTGCAACGATTGTGTCTCGAAATATATAGCTGCAAAATTACAAGACAACATCCT 134 Query 486 CTCAATCGAATGTCCTGTCTCTGGTT------GTTCTGGTCGGCTCGAGCCAGATCAGTG 539 ||||||||| |||| ||||||||||| | ||||||||||||||||||||| |||| Sbjct 135 CTCAATCGAGTGTCTTGTCTCTGGTTGCAAGAGCTCTGGTCGGCTCGAGCCAGATAAGTG 194 Query 540 TCGTCAGATTTTGCCTAA-AGAGGTTTTTGATCGGTGGGGTGATGCT-TTGTGTGAAGCA 597 |||||| || ||||| || |||||||||||||| ||||| ||||||| || | ||||||| Sbjct 195 TCGTCAAATCTTGCC-AAGAGAGGTTTTTGATCAGTGGGATGATGCTCTT-TCTGAAGCA 252 Query 598 GTAGTGATGCGTTCGAAGAAATTCTACTGTCCTTACAAGGATTGCTCTGCTTTGGTTTTC 657 ||| |||||||||| |||| ||| || |||||||| |||||||||||||||||| ||||| Sbjct 253 GTATTGATGCGTTCAAAGAGATTATATTGTCCTTATAAGGATTGCTCTGCTTTGCTTTTC 312 Query 658 -TTAGA-AGAGAGTGAAGTAAAGATGAAAGATTCGGAGTGTCCTCATTGTCATAGAATGG 715 || || | |||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 313 ATT-GACA-AGAGTGAAGTGAAGATGAAAGATTCGGAGTGTCCTCATTGCCATAGAATGG 370 Query 716 TGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGAGATGACTTGCGAGGAGTTTCAGAAGC 775 ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct 371 TGTGTGTAGAGTGTGGGACTAAGTGGCATCCGGAGATAACTTGCGAGGAGTTTCAGAAGC 430 Query 776 TAGC-GGCGAACGAGAGAGGAAGAGATGATATTTTGCTTGCGACGATGGCAAAGCAAAAG 834 |||| || |||||| |||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct 431 TAGCAGG-GAACGAAAGAGGAAGAGATAATATTTTGCTCGCGACGATGGCAAAGAAAAAG 489 Query 835 AAATGGAAAAGATGTCCTTCTTGCAAATTCTATATTGAGAAATCTCAGGGTTGCTTATAC 894 || |||||||||||| |||||||||| ||||||||||||| |||||||||||||||||| Sbjct 490 AACTGGAAAAGATGTTATTCTTGCAAACTCTATATTGAGAAGTCTCAGGGTTGCTTATAC 549 Query 895 ATGAAGTGCAGGTG 908 ||||| |||||||| Sbjct 550 ATGAAATGCAGGTG 563 > Ahg952076 jgi|Araly1|952076|scaffold_35500001.1 Length=755 Score = 597 bits (323), Expect = 6e-170 Identities = 446/503 (89%), Gaps = 18/503 (4%) Strand=Plus/Plus Query 418 TGCTCTCA-CTTCTACTGCAACGACTGTGTTTCGAAATATATAGCAGCTAAATTACAAGA 476 |||||| | |||||||| |||||| ||||| |||||||||||||| || ||||||||||| Sbjct 112 TGCTCT-ACCTTCTACTACAACGATTGTGTCTCGAAATATATAGCTGCAAAATTACAAGA 170 Query 477 CAACATTCTCTCAATCGAATGTCCTGTCTCTGGTT------GTTCTGGTCGGCTCGAGCC 530 |||||| ||||||||||| |||| ||||||||||| | ||||||||||||||||| Sbjct 171 CAACATCCTCTCAATCGAGTGTCTTGTCTCTGGTTGCAAGAGCTCTGGTCGGCTCGAGCC 230 Query 531 AGATCAGTGTCGTCAGATTTTGCCTAA-AGAGGTTTTTGATCGGTGGGGTGATGCT-TTG 588 |||| |||||||||| || ||||| || |||||||||||||| ||||| ||||||| || Sbjct 231 AGATAAGTGTCGTCAAATCTTGCC-AAGAGAGGTTTTTGATCAGTGGGATGATGCTCTT- 288 Query 589 TGTGAAGCAGTAGTGATGCGTTCGAAGAAATTCTACTGTCCTTACAAGGATTGCTCTGCT 648 | |||||||||| |||||||||| |||| ||| || |||||||| |||||||||||| || Sbjct 289 TCTGAAGCAGTATTGATGCGTTCAAAGAGATTATATTGTCCTTATAAGGATTGCTCTACT 348 Query 649 TTGGTTTTC-TTAGA-AGAGAGTGAAGTAAAGATGAAAGATTCGGAGTGTCCTCATTGTC 706 ||| ||||| || || | |||||||||| ||||||||||||||||||||||||||||| | Sbjct 349 TTGCTTTTCATT-GACA-AGAGTGAAGTGAAGATGAAAGATTCGGAGTGTCCTCATTGCC 406 Query 707 ATAGAATGGTGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGAGATGACTTGCGAGGAGT 766 |||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||| Sbjct 407 ATAGAATGGTGTGTGTAGAGTGTGGGACTAAGTGGCATCCGGAGATAACTTGCGAGGAGT 466 Query 767 TTCAGAAGCTAGC-GGCGAACGAGAGAGGAAGAGATGATATTTTGCTTGCGACGATGGCA 825 ||||||||||||| || |||||| |||||||||||| |||||| ||| |||||||||||| Sbjct 467 TTCAGAAGCTAGCAGG-GAACGAAAGAGGAAGAGATAATATTTCGCTCGCGACGATGGCA 525 Query 826 AAGCAAAAGAAATGGAAAAGATGTCCTTCTTGCAAATTCTATATTGAGAAATCTCAGGGT 885 ||| ||||||| |||||||||||| |||||||||| ||||||||||||| ||||||||| Sbjct 526 AAGAAAAAGAACTGGAAAAGATGTTATTCTTGCAAACTCTATATTGAGAAGTCTCAGGGT 585 Query 886 TGCTTATACATGAAGTGCAGGTG 908 |||||||||||||| |||||||| Sbjct 586 TGCTTATACATGAAATGCAGGTG 608 > Ahg946986 jgi|Araly1|946986|scaffold_703215.1 Length=941 Score = 597 bits (323), Expect = 6e-170 Identities = 447/504 (89%), Gaps = 20/504 (4%) Strand=Plus/Plus Query 418 TGCTCTCA-CTTCTACTGCAACGACTGTGTTTCGAAATATATAGCAGCTAAATTACAAGA 476 |||||| | ||||||||||||||| ||||| |||||||||||||| || ||||||||||| Sbjct 115 TGCTCT-ACCTTCTACTGCAACGATTGTGTCTCGAAATATATAGCTGCAAAATTACAAGA 173 Query 477 CAACATTCTCTCAATCGAATGTCCTGTCTCTGGTT------GTTCTGGTCGGCTCGAGCC 530 |||||| ||||||||||| |||| ||||||||||| | |||| |||||||||||| Sbjct 174 CAACATCCTCTCAATCGAGTGTCTTGTCTCTGGTTGCAAGAGCTCTGTTCGGCTCGAGCC 233 Query 531 AGATCAGTGTCGTCAGATTTTGCCTAA-AGAGGTTTTTGATCGGTGGGGTGATGCT-TTG 588 |||| |||||||||| || ||||| || |||||||||||||| ||||| ||||||| || Sbjct 234 AGATAAGTGTCGTCAAATCTTGCC-AAGAGAGGTTTTTGATCAGTGGGATGATGCTCTT- 291 Query 589 TGTGAAGCAGTAGTGATGCGTTCGAAGAAATTCTACTGTCCTTACAAGGATTGCTCTGCT 648 | |||||||||| |||||||||| |||| ||| || |||||||| ||||||||||||||| Sbjct 292 TCTGAAGCAGTATTGATGCGTTCAAAGAGATTATATTGTCCTTATAAGGATTGCTCTGCT 351 Query 649 TTGGTTTTC-TTAGA-AGAGAGTGAAGTAAAGATGAAAGATTCGGAGTGTCCTCATTGTC 706 ||| ||||| || || | |||||||||| |||||||||||||||||||||||||||| || Sbjct 352 TTGCTTTTCATT-GACA-AGAGTGAAGTGAAGATGAAAGATTCGGAGTGTCCTCATT-TC 408 Query 707 -ATAGAATGGTGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGAGATGACTTGCGAGGAG 765 |||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||||| Sbjct 409 CATAGAATGGTGTGTGTAGAGTGTGGGACTAAGTGGCATCCTGAGATAACTTGCGAGGAG 468 Query 766 TTTCAGAAGCTAGC-GGCGAACGAGAGAGGAAGAGATGATATTTTGCTTGCGACGATGGC 824 |||||||||||||| || |||||| |||||||||||| |||||||||| ||||||||||| Sbjct 469 TTTCAGAAGCTAGCAGG-GAACGAAAGAGGAAGAGATAATATTTTGCTCGCGACGATGGC 527 Query 825 AAAGCAAAAGAAATGGAAAAGATGTCCTTCTTGCAAATTCTATATTGAGAAATCTCAGGG 884 |||| ||||||| |||||||||||| |||||||||| ||||||||||||| |||||||| Sbjct 528 AAAGAAAAAGAACTGGAAAAGATGTTATTCTTGCAAACTCTATATTGAGAAGTCTCAGGG 587 Query 885 TTGCTTATACATGAAGTGCAGGTG 908 ||||||||||||||| |||||||| Sbjct 588 TTGCTTATACATGAAATGCAGGTG 611 > Ahg891370 jgi|Araly1|891370|Al_scaffold_0007_3356 Length=513 Score = 569 bits (308), Expect = 1e-161 Identities = 408/454 (90%), Gaps = 15/454 (3%) Strand=Plus/Plus Query 415 GGA-TGCTCTCACTTCTACTGCAACGACTGTGTTTCGAAATATATAGCAGCTAAATTACA 473 ||| ||||||||||||||||||||||| ||||| || ||||||||||| || |||||||| Sbjct 63 GGACTGCTCTCACTTCTACTGCAACGATTGTGTCTCTAAATATATAGCTGCAAAATTACA 122 Query 474 AGACAACATTCTCTCAATCGAA-TGTCCTGTCTCTGGTT------GTTCTGGTCGGCTCG 526 ||||||||| ||||||||| || |||| ||||||||||| | ||||||||||||| Sbjct 123 AGACAACATCCTCTCAATC-AAGTGTCTTGTCTCTGGTTGCGAGAGCTCTGGTCGGCTCG 181 Query 527 AGCCAGATCAGTGTCGTCAGAT-TTTGCCTAAAGAGGTTTTTGATCGGTGGGGTGATGCT 585 ||| |||| ||||||||||||| || ||| | |||||||||||||| ||||||||||||| Sbjct 182 AGCTAGATAAGTGTCGTCAGATCTTGGCC-AGAGAGGTTTTTGATCAGTGGGGTGATGCT 240 Query 586 -TTGTGTGAAGCAGTAGTGATGCGTTCGAAGAAATTCTACTGTCCTTACAAGGATTGCTC 644 || | ||||| |||| |||||||||| |||||||||||||||||||| ||||||||||| Sbjct 241 CTT-TCTGAAGAAGTATTGATGCGTTCAAAGAAATTCTACTGTCCTTATAAGGATTGCTC 299 Query 645 TGCTTTGGTTTTC-TTAGAAGAGAGTGAAGTAAAGATGAAAGATTCGGAGTGTCCTCATT 703 ||||||| ||||| || || ||||||||||| |||||||||||||| ||||||||||||| Sbjct 300 TGCTTTGCTTTTCATT-GACGAGAGTGAAGTGAAGATGAAAGATTCAGAGTGTCCTCATT 358 Query 704 GTCATAGAATGGTGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGAGATGACTTGCGAGG 763 | ||||||||||||||||| |||||||||||| |||||||||| ||||| |||||||||| Sbjct 359 GCCATAGAATGGTGTGTGTAGAGTGTGGGACTAAGTGGCATCCAGAGATAACTTGCGAGG 418 Query 764 AGTTTCAGAAGCTAGCGGCGAACGAGAGAGGAAGAGATGATATTTTGCTTGCGACGATGG 823 |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| Sbjct 419 AGTTTCAGAAGCTAGCGGAGAACGAAAGAGGAAGAGATGATATTTTGCTCGCGACGATGG 478 Query 824 CAAAGCAAAAGAAATGGAAAAGATGTCCTTCTTG 857 ||||| |||||||||||||||||||||||||||| Sbjct 479 CAAAGAAAAAGAAATGGAAAAGATGTCCTTCTTG 512 > Ahg887317 jgi|Araly1|887317|Al_scaffold_1046_1 Length=483 Score = 499 bits (270), Expect = 2e-140 Identities = 355/395 (90%), Gaps = 10/395 (3%) Strand=Plus/Plus Query 514 TCTGGTCGGCTCGAGCCAGATCAGTGTCGTCAGATTTTGCCTAA-AGAGGTTTTTGATCG 572 ||||||||||| ||||||||| |||||||||| || ||||| || |||||||||||||| Sbjct 25 TCTGGTCGGCTAGAGCCAGATAAGTGTCGTCAAATCTTGCC-AAGAGAGGTTTTTGATCA 83 Query 573 GTGGGGTGATGCT-TTGTGTGAAGCAGTAGTGATGCGTTCGAAGAAATTCTACTGTCCTT 631 ||||| ||||||| || | |||||||||| |||||||||| |||| ||| || ||||||| Sbjct 84 GTGGGATGATGCTCTT-TCTGAAGCAGTATTGATGCGTTCAAAGAGATTATATTGTCCTT 142 Query 632 ACAAGGATTGCTCTGCTTTGGTTTTC-TTAGA-AGAGAGTGAAGTAAAGATGAAAGATTC 689 | |||||||||||||||||| ||||| || || | |||||||||| |||||||||||||| Sbjct 143 ATAAGGATTGCTCTGCTTTGCTTTTCATT-GACA-AGAGTGAAGTGAAGATGAAAGATTC 200 Query 690 GGAGTGTCCTCATTGTCATAGAATGGTGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGA 749 ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 201 GGAGTGTCCTCATTGCCATAGAATGGTGTGTGTAGAGTGTGGGACTAAGTGGCATCCGGA 260 Query 750 GATGACTTGCGAGGAGTTTCAGAAGCTAGC-GGCGAACGAGAGAGGAAGAGATGATATTT 808 ||| |||||||||||||||||||||||||| || |||||| |||||||||||| |||||| Sbjct 261 GATAACTTGCGAGGAGTTTCAGAAGCTAGCAGG-GAACGAAAGAGGAAGAGATAATATTT 319 Query 809 TGCTTGCGACGATGGCAAAGCAAAAGAAATGGAAAAGATGTCCTTCTTGCAAATTCTATA 868 |||| ||||||||||||||| ||||||| |||||||||||| |||||||||| |||||| Sbjct 320 TGCTCGCGACGATGGCAAAGAAAAAGAACTGGAAAAGATGTTATTCTTGCAAACTCTATA 379 Query 869 TTGAGAAATCTCAGGGTTGCTTATACATGAAGTGC 903 ||||||| ||||| ||||||||||||||||| ||| Sbjct 380 TTGAGAAGTCTCAAGGTTGCTTATACATGAAATGC 414 > Ahg924918 jgi|Araly1|924918|scaffold_200479.1 Length=521 Score = 492 bits (266), Expect = 3e-138 Identities = 358/401 (89%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 466 AAATTACAAGACAACATTCTCTCAATCGAATGTCCTGTCTCTGGTT------GTTCTGGT 519 ||||||||||||||||| ||||||||||| |||| ||||||||||| | |||||| Sbjct 101 AAATTACAAGACAACATCCTCTCAATCGAGTGTCTTGTCTCTGGTTGCGAGAGCTCTGGT 160 Query 520 CGGCTCGAGCCAGATCAGTGTCGTCAGAT-TTTGCCTAAAGAGGTTTTTGATCGGTGGGG 578 ||||||||||| ||| |||||||||| || || ||| | |||||||||||||| | |||| Sbjct 161 CGGCTCGAGCCTGATAAGTGTCGTCAAATCTTGGCC-AGAGAGGTTTTTGATCAGCGGGG 219 Query 579 TGATGCT-TTGTGTGAAGCAGTAGTGATGCGTTCGAAGAAATTCTACTGTCCTTACAAGG 637 ||||||| || | |||||||||| |||| ||||| |||| ||| ||||||||||| |||| Sbjct 220 TGATGCTCTT-TCTGAAGCAGTATTGATTCGTTCAAAGAGATTTTACTGTCCTTATAAGG 278 Query 638 ATTGCTCTGCTTTGGTTTTC-TTAGAAGAGAGTGAAGTAAAGATGAAAGATTCGGAGTGT 696 |||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||||| Sbjct 279 ATTGCTCTGCTTTGCTTTTCATT-GACGAGAGTGAAGTGAAGATGAAAGATTCGGAGTGT 337 Query 697 CCTCATTGTCATAGAATGGTGTGTGTGGAGTGTGGGACTCAGTGGCATCCGGAGATGACT 756 |||||||| |||| |||||||||||| |||||||||||| |||||||||| ||||| ||| Sbjct 338 CCTCATTGCCATATAATGGTGTGTGTAGAGTGTGGGACTAAGTGGCATCCAGAGATAACT 397 Query 757 TGCGAGGAGTTTCAGAAGCTAGCGGCGAACGAGAGAGGAAGAGATGATATTTTGCTTGCG 816 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| Sbjct 398 TGCGAGGAGTTTCAGAAGCTAGCGGAGAACGAAAGAGGAAGAGATGATATTTTGCTCGCG 457 Query 817 ACGATGGCAAAGCAAAAGAAATGGAAAAGATGTCCTTCTTG 857 |||||||||||| |||||||||||||||||||||||||||| Sbjct 458 ACGATGGCAAAGAAAAAGAAATGGAAAAGATGTCCTTCTTG 498 > Ahg908029 jgi|Araly1|908029|Al_scaffold_0002_1110 Length=180 Score = 276 bits (149), Expect = 3e-73 Identities = 169/179 (94%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 679 ATGAAAGATTCGGAGTGTCCTCATTGTCATAGAATGGTGTGTGTGGAGTGTGGGACTCAG 738 |||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| || Sbjct 1 ATGAAAGATTCGGAGTGTCCTCATTGCCATATAATGGTGTGTGTAGAGTGTGGGACTAAG 60 Query 739 TGGCATCCGGAGATGACTTGCGAGGAGTTTCAGAAGCTAGCGGCGAACGAGAGAGGAAGA 798 |||||||| ||||| |||||||||||||||||||||||||||| |||||| ||||||||| Sbjct 61 TGGCATCCAGAGATAACTTGCGAGGAGTTTCAGAAGCTAGCGGAGAACGAAAGAGGAAGA 120 Query 799 GATGATATTTTGCTTGCGACGATGGCAAAGCAAAAGAAATGGAAAAGATGTCCTTCTTG 857 |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct 121 GATGATATTTTGCTCGCGACGATGGCAAAGAAAAAGAAATGGAAAAGATGTCCTTCTTG 179 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44527567056 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5