BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G54100.1
Length=2376
Score E
Sequences producing significant alignments: (Bits) Value
Ahg938326 jgi|Araly1|938326|scaffold_502517.1 3168 0.0
Ahg482804 jgi|Araly1|482804|fgenesh2_kg.4__1864__AT2G37980.1 1378 0.0
> Ahg938326 jgi|Araly1|938326|scaffold_502517.1
Length=1954
Score = 3168 bits (1715), Expect = 0.0
Identities = 1880/1960 (96%), Gaps = 9/1960 (0%)
Strand=Plus/Plus
Query 60 CCTATTTCACCGGCGACGATATGTCAGTCGTCGGAGCGATTAACCCCGTACCAATTGCAC 119
||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct 1 CCTTTTTCACCGGCGACGATATGTCAGTCGCCGGAGCGATTAACCCGGTACCAATTGCAC 60
Query 120 CCACCACTCGCCGCCGTGTTGGCGATTCTCTAGACGTTATCTCCGAACGACCCTCGAATT 179
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 61 CCACCACTCGCCGCCGTGTCGGCGATTCTCTAGACGTAATCTCCGAACGACCCTCGAATT 120
Query 180 CATCTGATTACTGCAATACAATTAACCAACCCATCGTTGGATCAACAGATTTAGACGGAG 239
||||||| ||| |||||||| |||| |||||||||||||||||||||||||||||||| |
Sbjct 121 CATCTGACTACAGCAATACAGTTAATCAACCCATCGTTGGATCAACAGATTTAGACGGTG 180
Query 240 GAGATGCGA-CTGGTCAAGACTCGTCACCATCTTCGGAAAGCTCTGCTTCATCTACTGGA 298
||||||| | | || ||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct 181 GAGATGCAAGC-GGCCAAGACTCGTCCCCATCTTCGGAAAGCTCTGCTTCTTCTACTGGA 239
Query 299 TCTCATTACCATCACGATCACTACCACCGATTTTACAGTCATCCGGTGATTCGTTACCTT 358
|||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||
Sbjct 240 TCTCATTACCATCACGATCATTACCACCGATTTTACAATCATCCGGCGATTCGTTACCTT 299
Query 359 CTCCTCCGAAAATTCTGGATTCCGTTTTATGGTGGTGCATCGACGGTTGTGATTGGTCAA 418
|| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||
Sbjct 300 CTTCTCCGAAAATTCTGGATTCCG--TT-TGGTGGTGGATCGACGGTTGTGATTGGTCAA 356
Query 419 GGGTTTAGATCGGGGAGAAACGTGGGTCGTCGGATCTTGGGTCTTCTAATGTTGCTTGTG 478
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 357 GGGTTTAGATCGGGGAGAAACGTGGGTCGTCGGATCTTGGGTCTTCTAATGGTGCTTGTG 416
Query 479 GTTGCGTCTGTGTTCCTTAGAGTCTACCTTATGGGTGGTGTCCGCGTGGTGGATCACGCT 538
|||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||||||
Sbjct 417 GTTGCGTCTGTGTTTCTTAGGGTCTACCTTATGGGTGGTGTGCGTGTGGTTGATCACGCT 476
Query 539 CGTTTGAAGGAGTTTGTTGTTGTTAGAACGCTTCGTGATGATTGGTCAATGGCTCAACGT 598
|||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 477 CGTTTGAACGAGTTTGTTGTCGTTAGAACGCTTCGTGACGATTGGTCAATGGCTCAACGT 536
Query 599 GAAGTTGCAGAGAACCAAGCTTCTTCTCAGCCAATGCGTGTTCTCGAAAAGCTTCCCATT 658
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 537 GAAGTTGCAGAGAACCAAGCTTCTTCTCAGCCAATGCGTGTTCTCGAAAAACTTCCCATT 596
Query 659 CCGGAAATTTGGCAGAAACCTGAAAGCGGGAATTATCGCCAATGTGTGACGCG-CCCTAA 717
|||||||||||||||||||||||||| |||||||| |||||||||||| |||| ||| ||
Sbjct 597 CCGGAAATTTGGCAGAAACCTGAAAGTGGGAATTACCGCCAATGTGTGGCGCGTCCC-AA 655
Query 718 GAACTATACGAGACTGCAACGCCAAACCAATGGGTATCTTGTAGTACACGCAAATGGAGG 777
|||||| || |||||| | ||||||||||||||||||||| |||||||||||||||||||
Sbjct 656 GAACTACACAAGACTGTACCGCCAAACCAATGGGTATCTTTTAGTACACGCAAATGGAGG 715
Query 778 ATTGAATCAGATGAGAACTGGGATATGTGACATGGTCGCTGTTGCCAAGATTATGAATGC 837
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 716 ATTGAATCAGATGAGAACTGGGATATGTGACATGGTCGCTGTTGCCAAAATCATGAATGC 775
Query 838 AACTCTTGTTCTTCCTCTGCTTGACCATGAATCTTTCTGGACTGACCCGAGCACGTTCAA 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 AACTCTTGTTCTTCCTCTGCTTGACCATGAATCTTTCTGGACTGACCCGAGCACGTTCAA 835
Query 898 AGATATTTTTGACTGGAGAAACTTCATGAACGTACTGAAACACGATGTTGACATTGTCGA 957
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 836 AGATATTTTTGACTGGAGAAACTTCATGAACGTATTGAAACACGATGTTGACATTGTCGA 895
Query 958 GTACTTGCCTCCTCAGTATGCCGCAATGAAACCTCTTCTCAAGGCCCCTGTTTCTTGGTC 1017
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 896 GTACTTGCCTCCTCAGTATGCTGCAATGAAACCTCTTCTCAAGGCCCCTGTTTCTTGGTC 955
Query 1018 TAAGGCTAGTTACTACAGAAGCGAAATGTTGCCATTGTTGAAACGTCACAAGGTGTTAAA 1077
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 CAAGGCTAGTTACTACAGAAGCGAAATGTTGCCATTGTTGAAACGTCACAAGGTGTTAAA 1015
Query 1078 GTTCACGCTTACGGACTCACGGCTTGCTAACAATGGCCTGCCACCATCTATCCAACGACT 1137
||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1016 GTTCATGCTTACTGACTCACGGCTTGCTAACAATGGCTTGCCACCATCGATCCAACGACT 1075
Query 1138 GAGATGTCGTGCTAATTACCAGGCACTGCTATACACAAAGGAGATTGAGGACCTAGGGAA 1197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 GAGATGTCGTGCTAATTACCAGGCACTGCTATACACAAAGGAGATTGAGGACCTAGGGAA 1135
Query 1198 GATTTTGGTTAACCGGTTAAGAAACAACACTGAGCCGTATATCGCTCTGCATTTGAGATA 1257
|||||| |||||||||||||||||| ||| |||||| ||||| |||||||||||||||||
Sbjct 1136 GATTTTAGTTAACCGGTTAAGAAACCACAGTGAGCCTTATATTGCTCTGCATTTGAGATA 1195
Query 1258 TGAGAAGGACATGCTTGCCTTTACAGGATGCAACCACAATCTTACAACTGAGGAAGCAGA 1317
||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 1196 TGAGAAGGACATGCTTGCCTTTACAGGATGCAACCACAATCTTACAACTGAAGATGCTGA 1255
Query 1318 AGAGCTGAGAATCATGAGGTACAGTGTCAAACATTGGAAGGAGAAAGAGATTGATAGCCG 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 AGAGCTGAGAATCATGAGGTACAGTGTCAAACATTGGAAGGAGAAAGAGATTGATAGCCG 1315
Query 1378 AGAGAGACGGATTCAAGGCGGATGTCCAATGTCTCCGCGAGAAGCAGCTATATTTCTAAA 1437
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1316 AGAGAGACGGATTCAAGGCGGATGTCCAATGTCTCCGCGAGAAGCAGCTATATTTTTAAA 1375
Query 1438 AGCCATGGGATATCCGTCCTCCACGACTGTATATATAGTTGCTGGTGAAATCTATGGAAG 1497
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1376 GGCCATGGGATATCCGTCCTCCACGACTGTATATATAGTTGCTGGTGAGATCTATGGAAG 1435
Query 1498 CGAGAGTATGGATGCTTTCCGTGCAGAGTACCCAAATGTCTTCTCTCATTCAACCCTTGC 1557
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1436 CAAGAGTATGGATGCTTTCCGTGCAGAGTACCCAAATGTCTTCTCTCATTCAACTCTTGC 1495
Query 1558 GACTGAAGAAGAGTTAGAGCCTTTCAGTCAATACCAGAATCGCCTTGCTGCGTTGGACTA 1617
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1496 GACTGAAGAAGAGTTAGAGCCTTTCAGTCAATACCAGAACCGCCTTGCTGCGTTGGACTA 1555
Query 1618 CATTGTGGCCCTTGAAAGTGATGTTTTTGTGTATACATATGATGGTAATATGGCTAAGGC 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 CATTGTGGCCCTTGAAAGTGATGTTTTTGTGTATACATATGATGGTAATATGGCTAAGGC 1615
Query 1678 GGTACAAGGGCACAGAAAGTTTGAAGGGTTTAGGAAGTCCATAAATCCAGACAGGCTGAA 1737
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1616 GGTACAAGGGCACAGAAGGTTCGAAGGGTTTAGGAAGTCCATAAATCCAGACAGGCTGAA 1675
Query 1738 TTTTGTTAGACTGATAGATCATTTTGATGAGGGTATCATATCTTGGGAAGAGTTTTCTTC 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1676 TTTTGTTAGACTGATAGATCATTTTGATGAGGGTATCATATCTTGGGAAGAGTTTTCTTC 1735
Query 1798 TGAGGTTAAGAGATTAAATAGAGACAGGATTGGAGCAGCATATGGGAGACTGCCTGCTGC 1857
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 1736 TGAGGTTAAGAGATTAAATAGAGACAGGATTGGAGCGGCATATGCGAGACTGCCTGCTGC 1795
Query 1858 ACTTCCCAGGCTAGAGGAGAACTTCTATGCGAACCCACAACCTGATTGCATCTGTAACAA 1917
||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1796 ACTTCCCAGACTAGAGGAGAATTTCTATGCGAACCCACAACCCGATTGCATCTGTAACAA 1855
Query 1918 GTCTCATCCTGAGCAGCTGC-GGAAACAATCAAGTCTAAGGACAGACTCAAAGAGTTGGA 1976
|||||||||||||||||| | ||||||||||||||||||| |||||||||||||| ||||
Sbjct 1856 GTCTCATCCTGAGCAGCT-CAGGAAACAATCAAGTCTAAGAACAGACTCAAAGAGCTGGA 1914
Query 1977 AGAAGAGTGCCTTAAGATAGCAGTGATACAGTACCCGAAA 2016
||||||||||||||||||||||||||||||||| |||||
Sbjct 1915 AGAAGAGTGCCTTAAGATAGCAGTGATACAGTAATCGAAA 1954
> Ahg482804 jgi|Araly1|482804|fgenesh2_kg.4__1864__AT2G37980.1
Length=2165
Score = 1378 bits (746), Expect = 0.0
Identities = 1394/1694 (82%), Gaps = 96/1694 (6%)
Strand=Plus/Plus
Query 296 GGATCTCATTACCATCACGATCACT-ACCACCGATTTTACAGTCATCCGGTGATTCGTTA 354
|||||||||||||| |||||||| | || ||| | | || |||||| |||||| ||
Sbjct 399 GGATCTCATTACCACCACGATCA-TCACTACC-A---T-CA-TCATCCAACGATTCGGTA 451
Query 355 CCTTCTCCTCCG-AAAATTCTGGATT-CCG--T-T-TT--ATGGTGGTGCATCGACGGTT 406
|||||||||||| ||| | | || || ||| | | || | ||||||| ||| |||| |
Sbjct 452 CCTTCTCCTCCGTAAACTAC-GG-TTACCGTTTCTCTTCGACGGTGGTGGATCAACGGCT 509
Query 407 GTGATTGGTCAA-G--GG---TTTAGATCGGGGAGAAACGTGGGTCGTCGGATCTTGGGT 460
||| | |||||| | || ||| | || ||||||||| ||||||||||||||||||||
Sbjct 510 GTGGTGGGTCAAGGATGGTTCTTTTGTTCAGGGAGAAACATGGGTCGTCGGATCTTGGGT 569
Query 461 CTTCTAATGTTGCTTGTGGTTGCGTCTGTGTTCCTTAGAGTCTAC-CTTATGGGTGGTGT 519
||||| ||| | || || || || ||| | ||||||||||| | | || ||| |||| |
Sbjct 570 CTTCTCATGATCCTCGTCGTCGCTTCTCTCTTCCTTAGAGT-TTCTCTCATGAGTGG-G- 626
Query 520 CCGCGTGGTGGATC-A-CGC-TC-----G-TTTGAAGGAGTTTGTTGTTGTTA-GAACGC 569
||||| || || | | ||| | | |||||| ||| | || || | || | |||
Sbjct 627 -CGCGTCGTTGACCAAGCGCACCGGAGAGATTTGAACGAGCTCGTCGTCG-TACGGACG- 683
Query 570 TT-CGTGATGATTGGTCAATGGCTCAACGTG-AAGTTG-CAGAGAACCAAGCTTCTTCTC 626
|| | || |||||||||||||||||||||| || || | ||||| | | ||
Sbjct 684 TTACACGAAGATTGGTCAATGGCTCAACGTGCAA--TGACGGAGAA-C--G-------TC 731
Query 627 AGCCAATGCGTGTTCTCGAAAAGCTTCCCATTCCGGAAATTTGGCAGAAACCTGAAAGCG 686
| | | | | || |||||||||||||||||||| |||||||||||||||| ||
Sbjct 732 -G----T-C---AT-T-GAGAAGCTTCCCATTCCGGAAATATGGCAGAAACCTGAAAACG 780
Query 687 GGAATTATCGCCAATGTGTGACGCGCCCTAAGAACTATACGAGACTGCAA--CGCCAAAC 744
| ||||||||||| |||| | | || ||||||||| | | || || || | ||||
Sbjct 781 GAAATTATCGCCAGTGTGCGTCACGTCCTAAGAACCGTTCAAGGCT--AAGTAGGAAAAC 838
Query 745 CAATGGGTATCTTGTAGTACACGCAAATGGAGGATTGAATCAGATGAGAACTGGGATATG 804
|||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 839 CAATGGTTATCTTTTAGTACACGCGAATGGCGGATTGAATCAGATGAGAACTGGGATATG 898
Query 805 TGACATGGTCGCTGTTGCCAAGATTATGAATGCAACTCTTGTTCTTCCTCTGCTTGACCA 864
||||||||| |||| || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct 899 TGACATGGTTGCTGCAGCAAAGATTATGAATGCTACTCTTGTTCTACCTCTCCTCGACCA 958
Query 865 TGAATCTTTCTGGACTGACCCGAGCACGTTCAAAGATATTTTTGACTGGAGAAACTTCAT 924
||||||||||||||||||||| || || |||||||||||||||||||||||| |||||||
Sbjct 959 TGAATCTTTCTGGACTGACCCCAGTACTTTCAAAGATATTTTTGACTGGAGACACTTCAT 1018
Query 925 GAACGTACTGAAACACGATGTTGACATTGTCGAGTACTTGCCTCCTC-AGTATGCCGCAA 983
||||||| ||||| | ||||||||||||||||||||||| ||||| | | ||||| || |
Sbjct 1019 GAACGTATTGAAAGATGATGTTGACATTGTCGAGTACTTACCTCCCCGA-TATGCAGCCA 1077
Query 984 TGAAACCTCTTCTCAAGGCCCCTGTTTCTTGGTCTAAGGCTAGTTACTACAGAAGCGAAA 1043
||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct 1078 TGAGACCTCTCCTCAAGGCTCCTGTTTCTTGGTCCAAGGCTAGTTACTACAGAAGCGAGA 1137
Query 1044 TGTTGCCATTGTTGAAACGTCACAAGGTGTTAAAGTTCACGCTTACGGACTCACGGCTTG 1103
|||| || |||||||| || |||||| |||||||||| | || || || || || |
Sbjct 1138 TGTTACCGCTGTTGAAAAAACATAAGGTGGTAAAGTTCACACACACCGATTCGCGCCTGG 1197
Query 1104 CTAACAATGGCCTGCCACCATCTATCCAACGACTGAGATGTCGTGCTAATTACCAGGCAC 1163
| ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1198 CCAACAATGGCTTGCCACCATCAATCCAACGGCTGAGATGTCGTGCTAATTACCAGGCAT 1257
Query 1164 T-GCTATACACAAAGGAGATTGAGGACCTAGGGAAGATTT-TGGTTAACCGGTTAAGAAA 1221
| | ||| | |||||||||||||| | ||||| | || |||||||||||||| ||||
Sbjct 1258 TAGGG-TACTCCAAGGAGATTGAGGAGTTTGGGAA-AGTTCTGGTTAACCGGTTACGAAA 1315
Query 1222 CAACACTGAGCCGTAT-ATCGCTCTGCATTTGAGATATGAGAAGGACATGCTTGCCTTTA 1280
||||| |||||| | | || |||||||| |||||||| ||||| || |||||||||||||
Sbjct 1316 CAACAGTGAGCCCT-TCATTGCTCTGCACTTGAGATACGAGAAAGATATGCTTGCCTTTA 1374
Query 1281 CAGGATGCAACCACAATCTTACAACTG-AGGAAGCAGAAGAGCTGAGAATCATGAGGTAC 1339
|||| |||| ||||||||| ||| ||| || |||| |||||||||||||| |||||||||
Sbjct 1375 CAGGCTGCAGCCACAATCTCACAGCTGGAG-AAGCTGAAGAGCTGAGAATAATGAGGTAC 1433
Query 1340 AGTGTCAAACATTGGAAGGAGAAAGAGATTGATAGCCGAGAGAGACGGATTCAAGGCGGA 1399
| ||| |||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 1434 AATGTTAAACATTGGAAGGAGAAAGAGATTGACAGCAGAGAGAGGCGGATTCAAGGCGGT 1493
Query 1400 TGTCCAATGTCTCCGCGAGAAGCAGCTATATTTCTAAAAGCCATGGGATATCCGTCCTCC 1459
|| || |||||||| ||||||||||| ||||||||||| || ||||||||||| |||||
Sbjct 1494 TGCCCGATGTCTCCTCGAGAAGCAGCCATATTTCTAAAGGCAATGGGATATCCATCCTCG 1553
Query 1460 ACGACTGTATATATAGTTGCTGGTGAAATCTATGGAAGCGAGAGTATGGATGCTTTCCGT 1519
||||||||||| |||||||||||||||||||||||| | | |||||||||||||| ||
Sbjct 1554 ACGACTGTATACATAGTTGCTGGTGAAATCTATGGAGGAAACAGTATGGATGCTTTTCGA 1613
Query 1520 GCAGAGTACCCAAATGTCTTCTCTCATTCAACCCTT-GCGACTGAAGAAGAGTTAGAGCC 1578
| |||||||||||| |||||| |||||||||| || || ||||||||||||||||||||
Sbjct 1614 GAAGAGTACCCAAACGTCTTCGATCATTCAACC-TTAGCAACTGAAGAAGAGTTAGAGCC 1672
Query 1579 -TTTCAGTCAATACCAGAATCGCCTTGCTGCGTTGGACTACATTGTGGCCCTTGAAAGTG 1637
||| || || |||||||| ||||| ||||| ||||| ||||||||||| |||||||| |
Sbjct 1673 CTTTAAGCCA-TACCAGAACCGCCTGGCTGCTTTGGATTACATTGTGGCACTTGAAAGCG 1731
Query 1638 ATGTTTTTGTGTATACATATGATGGTAATATGGCTAAGGCGGTACAAGGGCACAGAA-AG 1696
|||||||||| |||||||||||||| ||||||||||||||||||||||| ||| | | |
Sbjct 1732 ATGTTTTTGTATATACATATGATGGGAATATGGCTAAGGCGGTACAAGGACACCGTAGA- 1790
Query 1697 TTTGAAGGGTTTAGGAAGTCCATAAATCCAGACAGGCTGAATTTTGTTAGACTGATAGAT 1756
||||||||||||| |||| | || |||||||||||| | |||||||| ||||||||||||
Sbjct 1791 TTTGAAGGGTTTAAGAAGACTATCAATCCAGACAGGTTAAATTTTGTGAGACTGATAGAT 1850
Query 1757 CATTTTGATGAGGGTATCATATCTTGGGAAGAGTTTTCTTCTGAGGTTAAGAGATTAAAT 1816
||||| || |||||| | || |||||||| |||||||| || || || ||||||||| ||
Sbjct 1851 CATTTAGACGAGGGTGTAATGTCTTGGGATGAGTTTTCATCAGAAGTAAAGAGATTACAT 1910
Query 1817 AGAGA-CAGGATTGGAGCAGC-ATATGGGAGACTGCCTGCTGCACTTCC-CAGGCTAGAG 1873
| | | |||||||||||| || ||||| ||||| || | || | |||| | ||||||||
Sbjct 1911 A-ACAACAGGATTGGAGC-GCCATATGCGAGACACCCCGGTGAATTTCCTC-GGCTAGAG 1967
Query 1874 GAGAACTTCTATGCGAACCCACAACCTGATTGCATCTGTAACAAGTCTCATCCTGAGCAG 1933
||||| ||||| |||||||||||||| |||||||| |||||||||||||| ||||||||
Sbjct 1968 GAGAATTTCTACGCGAACCCACAACCAGATTGCATATGTAACAAGTCTCAGCCTGAGCAA 2027
Query 1934 CTGC-GGAAA-CAA 1945
|| | ||||| |||
Sbjct 2028 CT-CTGGAAATCAA 2040
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89512075750
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5