BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G57330.1
Length=3277
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486176 jgi|Araly1|486176|fgenesh2_kg.5__2168__AT3G57330.1 5214 0.0
Ahg483236 jgi|Araly1|483236|fgenesh2_kg.4__2296__AT2G41560.1 3166 0.0
Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1 259 9e-68
> Ahg486176 jgi|Araly1|486176|fgenesh2_kg.5__2168__AT3G57330.1
Length=3263
Score = 5214 bits (2823), Expect = 0.0
Identities = 3093/3224 (96%), Gaps = 16/3224 (0%)
Strand=Plus/Plus
Query 1 ATGTCTAATCTACTAAAGGATTTCGAGGTCGCATCTAAGAATCCGTCGCTGGAAGCTCGT 60
||||||||||| || |||||||||||||||| | |||||||||||||||| |||||||||
Sbjct 1 ATGTCTAATCTCCTTAAGGATTTCGAGGTCGAAGCTAAGAATCCGTCGCTCGAAGCTCGT 60
Query 61 CAACGATGGCGATCCTCCGTGGGACTCGTAAAAAATCGGGCTCGTCGTTTCCGTATGATC 120
||||||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||
Sbjct 61 CAACGATGGCGGTCCTCCGTCGGACTCGTCAAAAATCGGGCTCGTCGATTCCGTATGATC 120
Query 121 AGTAATCTCGACAAACTCGCTGAGAATGAGAAGAAGAGATGCCAGATCCAGGAAAAGATA 180
|| |||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 121 AGCAATCTCGAGAAACTCGCTGAGAATGACAAGAAGAGATGCGAGATCCAGGAAAAGATA 180
Query 181 AGGGTTGTC-TTCTATGTTCAAAAGGCAGCTTTTCAGTTTATTGATGCTGGTGCCCGCCC 239
|||||| | ||||||||||||||||||||| ||||||| ||||||||||| ||||| |
Sbjct 181 CGGGTTG-CTTTCTATGTTCAAAAGGCAGCTCTTCAGTTCATTGATGCTGGCGCCCGTCG 239
Query 240 TGAATATAAACTCACTGATGAGGTCAAAAAAGCAGGATTTTATGTCGAAGCAGATGAGCT 299
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 240 TGAATATAAACTCACTGATGAGGTCAAACAAGCAGGATTTTATGTCGAAGCAGATGAGCT 299
Query 300 TGCTTCTATGGTTCGCAATCATGACACAAAGAGCCTTACAAAAATCGGAGGACCTGAAGG 359
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct 300 TGCTTCTATGGTTCGCAATCATGACACAAAGAGCCTTACCAAGAGCGGAGGACCTGAAGG 359
Query 360 AATCGCTCAGAAAGTATCTGTATCTCTCGCTGAAGGTGTACGTTCGAGTGAACTACACAT 419
||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 360 AATTGCTCAGAAAGTGTCTGTATCTCTCGCTGAAGGTGTCCGTTCGAGTGAACTACACAT 419
Query 420 CAGAGAAAAAATCTATGGAGAAAACCGTTATACTGAGAAACCAGCCAGATCATTTTTAAC 479
|||||| |||||||||||||||||||||||| |||||||||| |||||||| ||||||||
Sbjct 420 CAGAGAGAAAATCTATGGAGAAAACCGTTATCCTGAGAAACCTGCCAGATCGTTTTTAAC 479
Query 480 GTTTGTTTGGGAAGCGCTTCAAGACATTACCCTTATCATCCTTATGGTCTGCGCTGTAGT 539
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 480 GTTTGTTTGGGAAGCGCTTCAAGACATAACCCTTATCATCCTTATGGTCTGCGCTGTAGT 539
Query 540 ATCAATAGGAGTGGGAGTTGCAACAGAAGGTTTTCCAAAGGGCATGTATGATGGGACGGG 599
||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct 540 ATCGATAGGAGTGGGAGTTGCCACAGAAGGATTTCCAAAGGGCATGTATGATGGGACGGG 599
Query 600 GATCTTGCTTAGTATAATCTTGGTGGTCATGGTTACTGCTATCAGTGACTACAAGCAATC 659
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 600 GATCTTGCTTAGTATAATCTTGGTGGTTATGGTTACTGCTATCAGTGACTACAAGCAATC 659
Query 660 TTTGCAGTTCAGAGATTTGGATCGAGAGAAAAAGAAGATTATTATTCAAGTCACCAGGGA 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 TTTGCAGTTCAGAGATTTGGATCGAGAGAAAAAGAAGATTATTATTCAAGTCACCAGGGA 719
Query 720 TGGCAGCAGACAAGAGGTCTCCATCCATGACTTGGTTGTTGGAGATGTGGTCCATTTATC 779
||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 720 TGGGAGCAGACAAGAGATCTCCATCCATGACTTGGTTGTTGGAGATGTGGTTCATTTATC 779
Query 780 TATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCCGGATACAATCTGGAGATAGA 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 TATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCCGGATACAATCTGGAGATAGA 839
Query 840 CGAGTCAAGCTTATCGGGCGAGAGTGAACCATCACATGTGAATAAAGAGAAGCCGTTTCT 899
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 840 CGAATCAAGCTTATCGGGCGAGAGTGAACCATCACATGTGAATAAAGAGAACCCGTTTCT 899
Query 900 GCTTTCAGGAACCAAAGTCCAAAACGGCTCTGCAAAAATGCTGGTGACAACCGTTGGTAT 959
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 900 GCTTTCAGGAACCAAAGTCCAAAACGGCTCTGCAAAAATGCTGGTTACAACCGTTGGTAT 959
Query 960 GAGGACTGAGTGGGGAAAGTTGATGGATACTCTGAGTGAGGGTGGAGAGGATGAGACCCC 1019
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 960 GAGGACTGAGTGGGGAAAGTTGATGGATACTCTGTGTGAGGGTGGAGAGGATGAGACCCC 1019
Query 1020 TCTGCAGGTGAAACTAAATGGTGTTGCAACAATCATAGGTAAGATTGGTTTAGGCTTTGC 1079
|||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 1020 TCTGCAGGTGAAACTAAACGGTGTTGCAACAATCATAGGTAAGATTGGTTTAGTATTTGC 1079
Query 1080 AGTG-CTTACGTTTGTGGTGTTGTGCATAAGGTTCGTTGTGGAGAAAGCCACGGCTGGTA 1138
|||| | ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 AGTGAC-TACGTTTTTGGTGTTGTGCATAAGGTTCGTTGTGGAGAAAGCCACGGCTGGTA 1138
Query 1139 GCATCACTGAGTGGTCTTCTGAAGATGCACTAACATTGCTTGACTACTTTGCAATTGCTG 1198
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1139 GCATCACTGAGTGGTCTTCTGAAGATGCACTAACATTTCTTGACTACTTTGCAATTGCTG 1198
Query 1199 TTACCATTATAGTCGTTGCTGTACCTGAAGGGTTACCTTTGGCTGTGACCTTAAGTCTAG 1258
||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1199 TTACCATTATAGTTGTTGCTGTACCTGAAGGATTACCTTTGGCTGTGACCTTGAGTCTAG 1258
Query 1259 CATTTGCTATGAAGCAA-TTAATGAGTGATAGGGCACTTGTAAGGCATCTGGCTGCATGT 1317
|||||||||||||| || ||||||||||| ||||||||||| |||||| |||||||||||
Sbjct 1259 CATTTGCTATGAAG-AAGTTAATGAGTGACAGGGCACTTGTGAGGCATTTGGCTGCATGT 1317
Query 1318 GAGACGATGGGTTCTTCTACCTGCATCTGCACGGATAAAACAGGGACCTTAACCACTAAC 1377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 GAGACGATGGGTTCTTCTACCTGCATCTGCACGGATAAAACAGGGACCTTAACCACTAAC 1377
Query 1378 CACATGGTAGTCAACAAAGTTTGGATATGTGAAAATATCAAAGAGAGGCAAGAGGAAAAC 1437
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1378 CACATGGTAGTCAACAAAGTTTGGATATGTGAAAATATCAAGGAGAGGCAAGAAGAAAAC 1437
Query 1438 TTCCAGTTGAACCTATCCGAACAAGTTAAGAATATCCTTATACAGGCCATATTTCAGAAC 1497
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 1438 TTCCAGTTGAACCTATCTGAACTAGTTAAGAATATCCTTATACAGGCCATATTTCAGAAC 1497
Query 1498 ACTGGTTCTGAAGTTGTTAAGGATAAGGAAGGAAAAACTCAGATCCTGGGTTCACCTACA 1557
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 ACTGGTTCTGAAGTCGTTAAGGATAAGGAAGGAAAAACTCAGATCCTGGGTTCACCTACA 1557
Query 1558 GAAAGGGCGATACTGGAATTTGGTTTGCTTTTGGGTGGTGACGTTGACACGCAACGCCGA 1617
|||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1558 GAAAGGGCTATACTGGAATTTGGTTTGCTTTTAGGTGGTGACGTTGACACACAACGCCGA 1617
Query 1618 GAACATAAGATACTCAAGATCGAGCCATTCAACTCAGACAAGAAGAAAATGTCTGTTCTT 1677
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1618 GAACATAAGATACTCAAGATAGAGCCATTCAACTCAGACAAGAAGAAAATGTCTGTTCTT 1677
Query 1678 ACATCTCATTCAGGTGGTAAAGTACGTGCTTTCTGCAAAGGTGCATCTGAAATAGTCTTG 1737
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 ACATCTCATTCTGGTGGTAAAGTACGTGCTTTCTGCAAAGGTGCATCTGAAATAGTCTTG 1737
Query 1738 AAAATGTGTGAGAAGGTTGTGGATTCAAACGGAGAATCTGTTCCTTTATCTGAAGAAAAG 1797
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 AAAATGTGCGAGAAGGTTGTGGATTCAAACGGAGAATCTGTTCCTTTATCTGAAGAAAAG 1797
Query 1798 ATTGCAAGTATCTCTGATGTCATAGAGGGATTTGCTTCAGAGGCTCTTAGGACTCTCTGC 1857
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1798 ATTGCAAGTATCTCTGATGTCATAGAGGGATTTGCTTCAGAGGCTCTGAGAACTCTCTGC 1857
Query 1858 TTAGTTTACACGGATCTTGATGAAGCTCCCAGA-GGGGATCTTCCTAATGGTGGCTACAC 1916
||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||||||
Sbjct 1858 TTAGTTTACACGGATCTTGATGAAGCTCCCA-ATGGGAATCTTCCTGATGGTGGCTACAC 1916
Query 1917 ATTGGTAGCAGTTGTTGGAATCAAGGACCCGGTTCGGCCTGGTGTTAGGGAAGCCGTTCA 1976
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1917 ATTGGTTGCAGTTGTTGGAATCAAGGACCCGGTTCGCCCTGGTGTTAGGGAAGCCGTTCA 1976
Query 1977 GACTTGTCAAGCTGCTGGAATCACTGTTCGTATGGTCACTGGTGATAACATTAGCACTGC 2036
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1977 GACTTGTCAAGCTGCTGGAATCACTGTTCGTATGGTCACTGGTGATAACATAAGCACTGC 2036
Query 2037 CAAAGCGATTGCAAAGGAATGTGGTATACTTACAGCAGGAGGTGTAGCTATAGAAGGTTC 2096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2037 CAAAGCGATTGCAAAGGAATGTGGTATACTTACAGCAGGAGGTGTAGCTATAGAAGGTTC 2096
Query 2097 AGACTTCCGTAATTTGCCTCCACATGAAATGAGGGCCATTCTACCGAAAATCCAGGTGAT 2156
||| ||||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||
Sbjct 2097 AGAGTTCCGCAATTTGCCTCCACATGAAATGAGGGCCATTTTACCCAAAATTCAGGTGAT 2156
Query 2157 GGCTCGGTCTTTGCCATTGGACAAACATACATTAGTCAACAACTTGAGGAAAATGGGAGA 2216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2157 GGCTCGGTCTTTGCCATTGGACAAACATACATTAGTCAACAACTTGAGGAAAATGGGAGA 2216
Query 2217 GGTAGTTGCAGTGACTGGGGATGGAACAAATGATGCTCCTGCATTGCATGAGGCTGACAT 2276
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217 GGTAGTTGCAGTGACCGGGGATGGAACAAATGATGCTCCTGCATTGCATGAGGCTGACAT 2276
Query 2277 TGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAATGCTGATGTTATCAT 2336
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2277 TGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAATGCTGATGTAATCAT 2336
Query 2337 AATGGACGACAACTTTGCAACAATAGTGAATGTGGCAAAATGGGGACGTGCTGTGTATAT 2396
|||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 2337 AATGGATGACAACTTTGCAACAATAGTGAATGTGGCGAGATGGGGACGTGCTGTGTATAT 2396
Query 2397 CAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTTGTTGCTCTGATCATCAA 2456
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2397 TAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTTGTTGCTTTGATCATCAA 2456
Query 2457 CTTTGTCTCTGCTTGCATCACTGGATCTGCGCCACTCACCGCAGTGCAACTGCTTTGGGT 2516
||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||
Sbjct 2457 CTTTGTCTCTGCTTGCATCACCGGAGCTGCGCCACTCACTGCAGTGCAACTACTTTGGGT 2516
Query 2517 GAACATGATCATGGACACACTTGGTGCATTGGCTCTAGCGACCGAACCTCCCAACGAAGG 2576
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 2517 GAACATGATCATGGACACACTCGGTGCATTGGCTCTAGCAACCGAACCTCCCAACGAAGG 2576
Query 2577 TTTAATGAAACGCCAACCAATCGGTAGAACAGCAAGCTTCATCACCAGAGCTATGTGGAG 2636
|||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 2577 TTTAATGAAACGTCAACCAATCGCTAGAACCGCAAGCTTCATCACCAGAGCTATGTGGAG 2636
Query 2637 AAACATCATTGGTCAAAGCATTTATCAGTTAATCGTTCTCGGCATCCTCAACTTTGCTGG 2696
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 2637 AAACATCATTGGTCAAAGCATTTATCAGTTAATCGTCCTTGGCATCCTCAACTTTGCTGG 2696
Query 2697 CAAACAAATACTCAACCTTAATGGCCCAGATTCAACAATTGTTCTCAACACAATTATCTT 2756
|||||||||||||||||| || ||||||||||||||| ||||||||| || || |||||
Sbjct 2697 CAAACAAATACTCAACCTCAACGGCCCAGATTCAACAGCTGTTCTCAATACCATCATCTT 2756
Query 2757 CAACTCTTTCGTCTTTTGCCAGGTGTTTAATGAAGTAAACAGCAGAGAGATAGAGAAGAT 2816
|||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 2757 CAACTCCTTCGTCTTTTGTCAGGTGTTTAATGAAGTAAACAGCCGAGAGATAGAGAAGAT 2816
Query 2817 AAATGTGTTCGAAGGAATGTTCAAGAGTTGGGTGTTTGTTGCTGTAATGACTGCAACAGT 2876
||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2817 AAACGTGTTCAAAGGAATGTTCAAGAGTTGGGTGTTTGTTTCTGTAATGACTGCAACAGT 2876
Query 2877 TGGATTCCAAGTGATCATTGTTGAGTTCCTTGGAGCATTTGCAAGCACTGTTCCTTTGAG 2936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2877 TGGATTCCAAGTGATCATTGTTGAGTTCCTTGGAGCATTTGCAAGCACTGTTCCTTTGAG 2936
Query 2937 CTGGCAACATTGGCTACTCTGCATTTTGATTGGTTCCGTAAGCATGATTCTAGCCGTTGG 2996
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2937 CTGGCAACATTGGCTGCTCTGCATTTTGATTGGTTCCGTAAGCATGATTCTAGCCGTTGG 2996
Query 2997 TCTTAAATGCATACCGGTTGAGTCTAACCGTCATCACGATGGCTATGAGCTGCTTCCTTC 3056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2997 TCTTAAATGCATACCGGTTGAGTCTAACCGTCATCACGATGGCTATGAGCTGCTTCCTTC 3056
Query 3057 TGGTCCATCTGACTCTGCCTAACCCA-CCATCTAGTAA-CGCAACGTCCATTTTATATTT 3114
|||||||||||||||||||||||| | || |||||||| ||| |||||||||||||||||
Sbjct 3057 TGGTCCATCTGACTCTGCCTAACC-ATCCTTCTAGTAATCGCTACGTCCATTTTATATTT 3115
Query 3115 GAttttttttCCTT-----CCTTCTTCAACTCCGGGCTAATGATCTGATCTCAAATTGTA 3169
|||||||||| || |||| |||||||||||||||||||| ||||||||| |||||
Sbjct 3116 GATTTTTTTTTTTTTTGTTCCTTTTTCAACTCCGGGCTAATGATATGATCTCAATTTGTA 3175
Query 3170 TAAAATCGTTGCTGGATTTTTTCTATTTTGGGTGTGGGTTTGAT 3213
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3176 TAAAATCGTTGCTGGATTTTTTCTATTTTGGGTGTGGGTTTGAT 3219
> Ahg483236 jgi|Araly1|483236|fgenesh2_kg.4__2296__AT2G41560.1
Length=3201
Score = 3166 bits (1714), Expect = 0.0
Identities = 2652/3104 (85%), Gaps = 67/3104 (2%)
Strand=Plus/Plus
Query 1 ATGTCTAATCTACTAAAGGATTTCGAGGTCGCA-TCTAAGAATCCGTCGCTGGAAGCTCG 59
||||| ||| | |||| ||| |||||||||| | |||||||||||||||||||||| ||
Sbjct 77 ATGTCGAATTTGCTAAGGGACTTCGAGGTCG-AGGCTAAGAATCCGTCGCTGGAAGCGCG 135
Query 60 TCAACGATGGCGATCCTCCGT-GGGACTCGTAAAAAATCGGGCTCGTCGTTTCCGTATGA 118
|||||||||| | || ||||| | | || || || || ||||||||||||||| |
Sbjct 136 TCAACGATGGAGGTCGTCCGTCTCTA-TAGTGAAGAACCGTACTCGTCGTTTCCGTAACA 194
Query 119 -TCAGTAATCTCGACAAACTCGCTGAGAATGAGAAGAAG-AGATGCCAGATCCAGGAAAA 176
|| | ||||||| || |||||||| | |||| ||| || |||||||||||||||
Sbjct 195 TTC-GGGATCTCGATAAGCTCGCTGACTACGAGACCAAGAAG-CACCAGATCCAGGAAAA 252
Query 177 GATAAGGGTTGTC-TTCTATGTTCAAAAGGCAGCTTTTCAGTTTATTGATGCTGGTGCCC 235
||| | |||| | ||||||||||||||||||||| |||| || |||||||||| |||
Sbjct 253 GATCCGAGTTG-CTTTCTATGTTCAAAAGGCAGCTCTTCAATTCATTGATGCTGCTGCTA 311
Query 236 GCCCTGAATATAAACTCACTGATGAGGTCAAAAAAGCAGGATTTTATGTCGAAGCAGATG 295
| || ||||| || |||| ||||||||| || |||| ||||||| | | ||||||||||
Sbjct 312 GGCCGGAATACAAGCTCAGTGATGAGGTTAAGCAAGCTGGATTTTCTATTGAAGCAGATG 371
Query 296 AGCTTGCTTCTATGGTTCGCAATCATGACACAAAGAGCCT--TACAAAAATCGGAGGACC 353
| ||||| |||||||||||||| ||||||| |||||||| ||| ||| || |||
Sbjct 372 AACTTGCATCTATGGTTCGCAAAAATGACACTAAGAGCCTGGCACACAAA--GGTGGAGT 429
Query 354 TGAAGGAATCGCTCAGAAAGTATCTGTATCTCTCGCTGAAGGTGTACGTTCGAGTGAACT 413
||||| ||| ||| ||||| ||||||||||||| | |||||| || |||||||||||| |
Sbjct 430 TGAAGAAATTGCTAAGAAAATATCTGTATCTCTAGATGAAGGAGTTCGTTCGAGTGAAGT 489
Query 414 ACACATCAGAGAAAAAATCTATGGAGAAAACCGTTATACTGAGAAACCAGCCAGATCATT 473
| || ||| | ||| || | ||||||||| ||||| |||||||||||||||||||||||
Sbjct 490 GCCCACCAGGGCAAAGATATTTGGAGAAAATCGTTACACTGAGAAACCAGCCAGATCATT 549
Query 474 TTTAACGTTTGTTTGGGAAGCGCTTCAAGACATTACCCTTATCATCCTTATGGTCTGCGC 533
||||| |||||| ||||||||||| || ||||| ||||||||||||||||||||||||||
Sbjct 550 TTTAATGTTTGTGTGGGAAGCGCTCCACGACATAACCCTTATCATCCTTATGGTCTGCGC 609
Query 534 TGTAGTATCAATAGGAGTGGGAGTTGCAACAGAAGGTTTTCCAAAGGGCATGTATGATGG 593
||||||||||||||| ||||| ||||| |||||||| ||||||||||| |||||||||||
Sbjct 610 TGTAGTATCAATAGGTGTGGGTGTTGCCACAGAAGGATTTCCAAAGGGAATGTATGATGG 669
Query 594 GACGGGGATCTTGCTTAGTATAATCTTGGTGGTCATGGTTACTGCTATCAGTGACTACAA 653
|| ||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct 670 AACAGGGATCTTGCTAAGTATACTCTTGGTAGTCATGGTTACTGCGATCAGTGACTACAA 729
Query 654 GCAATCTTTGCAGTTCAGAGATTTGGATCGAGAGAAAAAGAAGATTATTATTCAAGTCAC 713
||||||||||||||||||||| |||||||||||||| |||||||||||| | || |||||
Sbjct 730 GCAATCTTTGCAGTTCAGAGACTTGGATCGAGAGAAGAAGAAGATTATTGTCCAGGTCAC 789
Query 714 CAGGGATGGCAGCAGACAAGAGGTCTCCATCCATGACTTGGTTGTTGGAGATGTGGTCCA 773
||| ||||| | ||||||||| ||||||| ||||||||||| ||||||||||| || ||
Sbjct 790 CAGAGATGGGAACAGACAAGAAATCTCCATTCATGACTTGGTCGTTGGAGATGTAGTTCA 849
Query 774 TTTATCTATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCCGGATACAATC-TGG 832
| ||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||
Sbjct 850 TCTATCTATTGGGGATCAAGTTCCAGCTGATGGGATTTTTATATCTGGATACAA-CTTGG 908
Query 833 AGATAGACGAGTCAAGCTTATCGGGCGAGAGTGAACCATCACATGTGAATAAAGAGAAGC 892
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 909 AGATAGATGAGTCAAGCTTATCGGGCGAGAGTGAACCGTCACATGTGAATAAAGAGAAGC 968
Query 893 CGTTTCTGCTTTCAGGAACCAAAGTCCAAAACGGCTCTGCAAAAATGCTGGTGACAACCG 952
| ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
Sbjct 969 CTTTTCTGCTTTCAGGAACCAAAGTACAAAACGGTTCTGCAAAAATGCTGGTGACAACAG 1028
Query 953 TTGGTATGAGGACTGAGTGGGGAAAGTTGATGGATACTCTGAG-TGAGGGTGGAGAGGAT 1011
|||||||||||||||||||||||||||||||||| || ||| | ||| |||||||| |||
Sbjct 1029 TTGGTATGAGGACTGAGTGGGGAAAGTTGATGGAAACGCTG-GTTGATGGTGGAGAAGAT 1087
Query 1012 GAGACCCCTCTGCAGGTGAAACTAAATGGTGTTGCAACAATCATAGGTAAGATTGGTTTA 1071
||||| |||||||||||||| |||||||| ||||||||||| || |||||||||||||||
Sbjct 1088 GAGACTCCTCTGCAGGTGAAGCTAAATGGGGTTGCAACAATAATTGGTAAGATTGGTTTA 1147
Query 1072 GGCTTTGCAGTGCTTACGTTTGTGGTGTTGTGCATAAGGTTCGT-TGTGGAGAAAGCCAC 1130
||| || |||||||| |||||||| |||||||||||||| || | |||||||||| ||
Sbjct 1148 ACCTTCGCCGTGCTTACATTTGTGGTATTGTGCATAAGGTTTGTCT-TGGAGAAAGCAAC 1206
Query 1131 GGCTGGTAGCATCACTGAGTGGTCTTCTGAAGATGCACTAACATTGCTTGACTACTTTGC 1190
| |||||||| |||| | ||||| |||||||||||||| || | ||||||||||||||
Sbjct 1207 GTCTGGTAGCTTCACCAACTGGTCATCTGAAGATGCACTGACGCTACTTGACTACTTTGC 1266
Query 1191 AATTGCTGTTACCATTATAGTCGTTGCTGTACCTGAAGGGTTACCTTTGGCTGTGACCTT 1250
|||| |||| || || || |||||||| || || ||||| || || |||| ||||||||
Sbjct 1267 AATTTCTGTAACTATCATTGTCGTTGCCGTGCCCGAAGGTTTGCCACTGGCAGTGACCTT 1326
Query 1251 AAGTCTAGCATTTGCTATGAAGCAA-TTAATGAGTGATAGGGCACTTGTAAGGCATCTGG 1309
|||| | ||||||||||||||| || | |||||||| ||||||||||| |||||||| |
Sbjct 1327 AAGTTTGGCATTTGCTATGAAG-AAGCTGATGAGTGACAGGGCACTTGTGAGGCATCTTG 1385
Query 1310 CTGCATGTGAGACGATGGGTTCTTCTACCTGCATCTGCACGGATAAAACAGGGACCTTAA 1369
||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||| |
Sbjct 1386 CTGCATGTGAGACTATGGGTTCTTCTACTTGCATCTGCACTGATAAGACAGGGACCTTGA 1445
Query 1370 CCACTAACCACATGGTAGTCAACAAAGTTTGGATATGTGA-AA-ATATCAAAGAGAGGCA 1427
| ||||| |||||||| ||||||||||| ||||| ||||| || | || ||||||||||
Sbjct 1446 CTACTAATCACATGGTGGTCAACAAAGTATGGATCTGTGATAAGGT-TC-AAGAGAGGCA 1503
Query 1428 AGA--G--G-A-A-A-A-CTTCCAGTT-GAACCTATCC-GAACAAGTTAAGAATATCCTT 1476
||| | | | | | | ||| ||||| ||| ||| || ||| ||||| ||| ||| |||
Sbjct 1504 AGAGGGAAGTACAGAGAGCTTTCAGTTGGAA-CTA-CCAGAAGAAGTTCAGAGTATTCTT 1561
Query 1477 ATACAGGCCATATTTCAGAACACTGGTTCTGAAGTTGTTAAGGATAAGGAAGGAAAAACT 1536
| |||| |||||||||||||||||||||||||||||||| |||||| || ||||| |||
Sbjct 1562 TTGCAGGGCATATTTCAGAACACTGGTTCTGAAGTTGTTAGGGATAAAGATGGAAACACT 1621
Query 1537 CAGATCCTGGGTTCACCTACAGAAAGGGCGATACTGGAATTTGGTTTGCTTTTGGGTGGT 1596
|||||||| || || || |||||||| || ||||| ||||| |||||| |||| ||||||
Sbjct 1622 CAGATCCTAGGATCCCCGACAGAAAGAGCAATACTCGAATTCGGTTTGGTTTTAGGTGGT 1681
Query 1597 GACGTTGACACGCAACGCCGAGAACATAAGATACTCAAGATCGAGCCATTCAACTCAGAC 1656
|| || ||||||| || ||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct 1682 GATTTTAACACGCAGCGTAAAGAGCATAAGATACTCAAGATTGAGCCGTTCAATTCAGAC 1741
Query 1657 AAGAAGAAAATGTCTGTTCTTACATCTCAT-TCAGGTGGTAAAGTACGTGCTTTCTGCAA 1715
|||||||||||||||||||| | | ||| | | || ||| | ||| |||||||||||
Sbjct 1742 AAGAAGAAAATGTCTGTTCTCATAACTC-TCCCTGGAGGTGGCGCACGGGCTTTCTGCAA 1800
Query 1716 AGGTGCATCTGAAATAGTCTTGAAAATGTGTGAGAAGGTTGTGGATTCAAACGGAGAATC 1775
||| |||||||||||||| ||||||||||| ||||| |||||||||||||| ||||||||
Sbjct 1801 AGGGGCATCTGAAATAGTGTTGAAAATGTGCGAGAATGTTGTGGATTCAAATGGAGAATC 1860
Query 1776 TGTTCCTTTATCTGAAGAAAAG-ATTGCAAGTATCTCTGATGTCATAGAGGGATTTGCTT 1834
|||||| || |||||| || | ||| ||||||||||||||||||||||||| ||||| |
Sbjct 1861 TGTTCCACTAACTGAAG-AACGAATTACAAGTATCTCTGATGTCATAGAGGGTTTTGCCT 1919
Query 1835 CAGAGGCTCTT-AGGACTCTCTGCTTAGTTTACACGGATCTTGATGAAGCTCCCAGAGGG 1893
|||||||| || |||||||||||||| ||||||| ||||| |||||||||||||| ||
Sbjct 1920 CAGAGGCT-TTGAGGACTCTCTGCTTGGTTTACAAAGATCTGGATGAAGCTCCCAGTGGA 1978
Query 1894 GATCTTCCTAATGGTGGCTACACATTGGTAGCAGTTGTTGGAATCAAGGACCCGGTTCGG 1953
||||| ||| |||| ||||| ||| || |||||||||||||||||||||| || || |||
Sbjct 1979 GATCTCCCTGATGGAGGCTATACAATGATAGCAGTTGTTGGAATCAAGGATCCAGTACGG 2038
Query 1954 CCTGGTGTTAGGGAAGCCGTTCAGACTTGTCAAGCTGCTGGAATCACTGTTCGTATGGTC 2013
|| |||||||||||||| || |||||||||||||||||||||||||| || |||||||||
Sbjct 2039 CCGGGTGTTAGGGAAGCTGTCCAGACTTGTCAAGCTGCTGGAATCACCGTCCGTATGGTC 2098
Query 2014 ACTGGTGATAACATTAGCACTGCCAAAGCGATTGCAAAGGAATGTGGTATACT-TACAGC 2072
||||| |||||||| ||||| || ||||| ||||||||||||||||||||| | ||| |
Sbjct 2099 ACTGGAGATAACATAAGCACAGCAAAAGCAATTGCAAAGGAATGTGGTATA-TATACTGA 2157
Query 2073 AGGAGGTGTAGCTATAGAAGGTTCAGACTTCCGTAATTTGCCTCCACATGAAATGAGGGC 2132
||||||| ||||||| ||||||||||| ||||| | || |||| || |||||||||||
Sbjct 2158 AGGAGGTTTAGCTATCGAAGGTTCAGAATTCCGGGACTTATCTCCTCACGAAATGAGGGC 2217
Query 2133 CATTCTACCGAAAATCCAGGTGATGGCTCGGTCTTTGCCATTGGACAAACATACATTAGT 2192
|||| | || ||||| ||||| |||||||||||| |||| ||||| |||||||| |||||
Sbjct 2218 CATTATCCCCAAAATTCAGGTAATGGCTCGGTCTCTGCCCTTGGATAAACATACTTTAGT 2277
Query 2193 CAACAACTTGAGGAAAATGGGAGAGGTAGTTGCAGTGACTGGGGATGGAACAAATGATGC 2252
|| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2278 CAGCAACTTGAGGAAAATTGGAGAGGTAGTTGCAGTGACTGGGGATGGGACAAATGATGC 2337
Query 2253 TCCTGCATTGCATGAGGCTGACATTGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGC 2312
||||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||
Sbjct 2338 CCCTGCCTTGCATGAGGCAGACATTGGACTTGCAATGGGAATAGCTGGGACAGAGGTTGC 2397
Query 2313 GAAAGAGAATGCTGATGTTATCATAATGGACGACAACTTTGCAACAATAGTGAATGTGGC 2372
|||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||
Sbjct 2398 GAAAGAGAATGCTGATGTGATCATAATGGACGATAACTTCAAAACAATAGTAAATGTGGC 2457
Query 2373 AAAATGGGGACGTGCTGTGTATATCAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGT 2432
| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 2458 TAGATGGGGACGTGCTGTGTATATAAACATTCAGAAGTTTGTTCAGTTCCAGCTAACTGT 2517
Query 2433 TAATGTTGTTGCTCTGATCATCAACTTTGTCTCTGCTTGCATCACTGGATCTGCGCCACT 2492
|||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2518 TAATGTGGTTGCTCTGATCATCAACTTTGTCTCTGCTTGCATCACAGGATCTGCTCCACT 2577
Query 2493 CACCGCAGTGCAACTGCTTTGGGTGAACATGATCATGGACACACTTGGTGCATTGGCTCT 2552
||| || |||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2578 CACTGCTGTGCAACTTCTTTGGGTCAACATGATCATGGACACACTTGGTGCATTGGCTCT 2637
Query 2553 AGCGACCGAACCTCCCAACGAAGGTTTAATGAAACGC-CAACCAATCGGTAGAACAGCAA 2611
||| || ||||||||||| ||||||||||||||||| || ||||||| |||||| || |
Sbjct 2638 AGCAACAGAACCTCCCAATGAAGGTTTAATGAAACGTGCA-CCAATCGTTAGAACCGCCA 2696
Query 2612 GCTTCATCACCAGAGCTATGTGGAGAAACATCATTGGTCAAAGCATTTATCAGTTAATCG 2671
|||||||||||| | | ||||||||||||||| ||||||||| |||| ||||| || |
Sbjct 2697 GCTTCATCACCAAAACCATGTGGAGAAACATCGCCGGTCAAAGCGTTTACCAGTTGATTG 2756
Query 2672 TTCTCGGCA-TCCTCAACTTTGCTGGCAAA-CAAATACTCAACCTTAATGGCCCAGATTC 2729
| || || | | ||||| ||||| |||||| || | ||||| || ||||||| || ||
Sbjct 2757 T-CTTGGGAATTCTCAATTTTGCAGGCAAATCACTT-CTCAAACTCGATGGCCCTGACTC 2814
Query 2730 AACAATTGTTCTCAACACAATTATCTTCAACTCTTTCGTCTTTTGCCAGGTGTTTAATGA 2789
||| |||||| ||||| | ||||||||||| ||||||||||||||||| || |||||
Sbjct 2815 CACAGCTGTTCTTAACACGGTCATCTTCAACTCCTTCGTCTTTTGCCAGGTATTCAATGA 2874
Query 2790 -AGTAAACAGCAGAGAGATAGAGAAGATAAATGTGTTCGA-AGGAATGTTCAAGAGTTGG 2847
| | || ||| | || ||||||||||||||||||||| | |||||||||||| || |||
Sbjct 2875 GA-TCAATAGCCGTGAAATAGAGAAGATAAATGTGTTC-ACAGGAATGTTCAATAGCTGG 2932
Query 2848 GTGTTTGT-TGCTGTAATGACTGCAACAGTTG-GATTCCAAGTGATCATTGTTGAGTTCC 2905
|| || || |||||||||| || || | | ||| |||||||||| || ||||| |
Sbjct 2933 GTCTTCACATGG-GTAATGACTGTGACCGTAGTGTTTC-AAGTGATCATAGTGGAGTTTC 2990
Query 2906 TTGGAGCATTTGCAAGCACTGTTCCTTTGAGCTGGCAACATTGGCTACTCTGCATT-TTG 2964
||||||||||||| ||||| |||||||||||||||||||||||| |||| | || | |||
Sbjct 2991 TTGGAGCATTTGCTAGCACCGTTCCTTTGAGCTGGCAACATTGGTTACTAT-CAATCTTG 3049
Query 2965 ATTGGTTCCGTAAGCATGATTCTAGCCGTTGGTCTT-AAATGCATACCGGTTGAGTCTAA 3023
|| || || | ||||||||| |||||||| || | ||||||||||| || ||||||
Sbjct 3050 ATAGGATCATTGAGCATGATTGTAGCCGTTA-TCCTCAAATGCATACCCGTCGAGTCTT- 3107
Query 3024 C-CGTCATCACGATGGCTATGAGCTGCTTCCTTCTGGTCCATCT 3066
| | |||||||||||||| || ||||||||||||||||| |||
Sbjct 3108 CTCACCATCACGATGGCTACGACCTGCTTCCTTCTGGTCCTTCT 3151
> Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1
Length=3341
Score = 259 bits (140), Expect = 9e-68
Identities = 478/636 (75%), Gaps = 43/636 (7%)
Strand=Plus/Plus
Query 1928 TTGTTGGAATCAAGGACCCGGTTCGGCCTGGTGTTAGGGAAGCCGTTCAGAC-TTGTCAA 1986
|||| || ||||| || || ||||| ||||| || | ||| ||||| || | |||||
Sbjct 2053 TTGTGGGGATCAAAGATCCTGTTCGTCCTGGAGTCAAAGAATCCGTTGAG-CTTTGTC-- 2109
Query 1987 G-C-TGCTGGAATCACTGTTCGTATGGTCACTGGTGATAACATTAGCACTGCCAAAGCGA 2044
| | ||||||||||||||| | ||||| || || |||||||||| ||| || ||||| |
Sbjct 2110 GTCGTGCTGGAATCACTGTGAGAATGGTTACAGGAGATAACATTAACACCGCGAAAGCAA 2169
Query 2045 TTGCAAAG-GAATGTGGTATACTT-ACAGCAGGA-GGTGTAGCTATAGAAGGTTCAG-AC 2100
|||| || |||||||| || || || | | || ||| |||| || || ||| | | |
Sbjct 2170 TTGC-TAGAGAATGTGGGAT-TTTAACTG-ATGACGGTATAGCCATCGAGGGTCCCGTA- 2225
Query 2101 TTCCGTA-ATTTGCCTCCACATGAAATGAG-GGCCA-TTCT-A--CCGAAA-ATCCAGGT 2153
||| | | | | | || | | || ||| | | || | || ||| || |||||
Sbjct 2226 TTCAG-AGAGAAGAAT-CA-A-G-AA-GAGTTACTAGAACTGATTCC-AAAGATTCAGGT 2278
Query 2154 GATGGCTCGGTCTTTGCCATTGGACAAACATACA-TTAGT-CAACAACTTGAGGA-AA-A 2209
|||||| || |||| |||| |||| ||||||||| || || ||| | || |||| ||
Sbjct 2279 GATGGCCCGTTCTTCGCCAATGGATAAACATACACTT-GTGAAAC-AGTTAAGGACAACG 2336
Query 2210 TGGGA-GAGGTAGTTGCAGTGACTGGGGATGGAACAAATGATGCTCCTGCA-TTGCATGA 2267
| || || || ||||| || ||||| ||||||||||||||||| |||||| || |||||
Sbjct 2337 TTTGATGAAGTTGTTGCTGTCACTGGAGATGGAACAAATGATGCACCTGCACTT-CATGA 2395
Query 2268 GGCTGACATTGGACTTGCCATGGGAATAGCTGGAACAGAGGTTGCGAAAGAGAATGCTGA 2327
||||| || ||||| || |||||||| |||||||| || || |||||||||| |||||
Sbjct 2396 AGCTGATATCGGACTAGCTATGGGAATTGCTGGAACTGAAGTGGCGAAAGAGAGCGCTGA 2455
Query 2328 TGTTATCATAATGGACGACAACTT-TGCAACAATAGTGA-ATGTGGCAAAATGGGGACGT 2385
||| ||||| | ||||| ||||| || || || || | | || || ||||||||||||
Sbjct 2456 TGTCATCATTCTCGACGATAACTTCAGC-ACGATCGTCACA-GTTGCTAAATGGGGACGT 2513
Query 2386 GCTGTGTATATCAACATCCAGAAGTTTGTTCAGTTCCAGCTAACTGTTAATGTTGTTGCT 2445
|||| || || ||||| ||||| || |||||||| ||||| || |||||||||||||||
Sbjct 2514 TCTGTTTACATAAACATACAGAAATTCGTTCAGTTTCAGCTTACGGTTAATGTTGTTGCT 2573
Query 2446 CTGATCATCAACTTTGTC-TCTGCTTGCATCACTGGATCTGCGCCACTCACCGCAGTGCA 2504
||| | | ||| || || || |||||| | || ||| ||| || | || || || ||
Sbjct 2574 CTGGTTGTTAAC-TTCTCTTCAGCTTGCTTAACCGGAAGTGCTCCTTTAACTGCTGTTCA 2632
Query 2505 ACTGCTTTGGGTGAACATGATCATGGACACACTTGG 2540
|||| |||||||||||||||||||||||||||||
Sbjct 2633 GTTGCTATGGGTGAACATGATCATGGACACACTTGG 2668
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 123687112250
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5