BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G57350.1
Length=2802
Score E
Sequences producing significant alignments: (Bits) Value
Ahg483241 jgi|Araly1|483241|fgenesh2_kg.4__2301__AT2G41620.1 2510 0.0
Ahg938710 jgi|Araly1|938710|scaffold_502901.1 2390 0.0
Ahg486177 jgi|Araly1|486177|fgenesh2_kg.5__2169__AT3G57340.1 154 4e-36
> Ahg483241 jgi|Araly1|483241|fgenesh2_kg.4__2301__AT2G41620.1
Length=3770
Score = 2510 bits (1359), Expect = 0.0
Identities = 2209/2618 (84%), Gaps = 63/2618 (2%)
Strand=Plus/Plus
Query 1 ATGGCGAACGACCAGGAGATGAGTGGATGGACTGATCTTCTCCATTCTTCGACTAAGCTT 60
|||||||||||||| ||||||||||| |||||||||||||||||||||||| | ||||||
Sbjct 65 ATGGCGAACGACCAAGAGATGAGTGGTTGGACTGATCTTCTCCATTCTTCGTCGAAGCTT 124
Query 61 CTGGAGCAAGCGGCTCCTTCTTCTCAGTTTCCTCCTCTTCAGAGGAATTTGGATCAATTG 120
|| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 125 CTTGAGCAAGCTGCTCCTTCTTCTCAGTTTCCTCCTCTTCAGAGAAATTTAGATCAATTG 184
Query 121 GAAGCATTGTCGAGGAAACTCAAAGCTAAAACCCTAAGAAACGAAGCTCCTTCACAGTCT 180
||||| || |||| ||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct 185 GAAGCGTTATCGAAGAAGCTCAAGGCTAAAACCCTAAGGAACGAAGCTCCTTCTCAGTCT 244
Query 181 ATTGCTGCCACTAGACTACTTGCACGGGAGGGAATCAATGCAGATCAATTATCTCGTGAT 240
|||||||||||||||||||| ||||||||||||||||||||||| ||| || ||||||||
Sbjct 245 ATTGCTGCCACTAGACTACTCGCACGGGAGGGAATCAATGCAGAGCAACTAGCTCGTGAT 304
Query 241 CTTAAGTCATTTGAGTTGAAGACGACTTTTGAAGATGTATTCCCTGCGGAGACAACAAGT 300
||||| || |||||| | ||||| || ||||| ||||| |||||||| ||| | || ||
Sbjct 305 CTTAAATCTTTTGAGCTCAAGACAACATTTGAGGATGTGTTCCCTGCTGAGGCGACGAGC 364
Query 301 GTTGAAGAATACCTGCAACAGGTTCATGAAATGGCAATGGTATCGGCTATACAGGAGGCC 360
||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||
Sbjct 365 GTTGAAGAATACCTGCAACAGGTTCATGAAATGGCTATGGTATCAGCTATACAGGAAGCC 424
Query 361 CAGAAA-GATAATGTTCGAAGCTTTAACAACTACATGTTGAAAGTGTTGGAGGAGGACTG 419
|| ||| |||||||||||||||||||| |||||||| |||||||| |||||||||| ||
Sbjct 425 CA-AAAGGATAATGTTCGAAGCTTTAATGACTACATGATGAAAGTGCTGGAGGAGGATTG 483
Query 420 TATAAAAGAAAAACGTGACTTTCTTCACAGCCTTAGCAAAACT-TCAATGTTACCTAAGA 478
| |||||||||||||||||| ||||| ||||| |||| || | |||||| ||||||| |
Sbjct 484 GAGAAAAGAAAAACGTGACTTCCTTCAGAGCCTCAGCAGAA-TATCAATGCTACCTAAAA 542
Query 479 CCAAGATGATCAATTCAAGTAGAG-GCTCTCATGCTGGTTC-ACTAGTGCC--T----TT 530
| || ||||| || |||| |||| | |||||||||| || ||||||||| | |
Sbjct 543 CAAATATGATTGATACAAGCAGAGAG-GCTCATGCTGG-TCAACTAGTGCCGGTGGCCTC 600
Query 531 GAGTCCCCAAGTATCTTCAAAACCTGG-AACGGAACTCGTGTCTATGACTAACAAACCCA 589
|||||| | |||||| |||| ||| || || ||||||||| || || |||||| |||||
Sbjct 601 GAGTCCTCGAGTATCCTCAACACCAGGCAA-AGAACTCGTGGCTCTGGCTAACATACCCA 659
Query 590 TTCATGAGAAAAAGGCATATGTCTATGCCGAGGTTGTGAAAAAACTAAACTCTGCAAGAG 649
||||||||||||| ||||||||||||| ||||||||||| ||||| |||||| ||||||
Sbjct 660 TTCATGAGAAAAAAGCATATGTCTATGGAGAGGTTGTGAAGAAACTTAACTCTTCAAGAG 719
Query 650 AACGAGGCTTGCCATTTAAACTTGCAACAT-TG-TTCAACGG-TGCATATGAAAGTCTAG 706
|||||||||||||||||| || ||| || || || || || || ||||| | ||| |
Sbjct 720 AACGAGGCTTGCCATTTAGACCTGC--TATGTGTTTTAA-GGAAGCTTATGATACTCTTG 776
Query 707 AAATTGA-TTTGACTCGTGGAAAATCAGTCAACATGCA-AAAATTATGGCAGCTTATTCA 764
||| || |||||||||||||||||||||||||| |||| ||||||||||| ||||
Sbjct 777 GTGCTGAGGTT-ACTCGTGGAAAATCAGTCAACATGCAGAAAA-TATGGCAGCTTGTTCA 834
Query 765 GGGAATGACGGGTGAAGAGTCAGCAGTACAACATGGTGTTTCCAAGAGGATGGCCCTCGT 824
|| ||| || |||||||| |||||||| | ||| |||||||| ||||||||||||||||
Sbjct 835 GGCAATAACAGGTGAAGATTCAGCAGTTCGACAGGGTGTTTCGAAGAGGATGGCCCTCGC 894
Query 825 GATAGGTGCAAGACGCCACTTGGAATGTGGGCATGGGAAACATATAATGGATACAATTCA 884
|||||||||||||| || || || |||||||| |||| ||||||||| ||||||||
Sbjct 895 GATAGGTGCAAGACATCATTTACAACATGGGCATGAGAAATTTATAATGGACACAATTCA 954
Query 885 AAGTCATCCTACACAAGCTGCTCTTGGTGGATCAGTTGGAAATTTGCAAAGAATTCGTGC 944
|||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 955 AAGTCACCCTACCCAGGCTGCTCTTGGTGGATCTGTTGGAAATTTGCAAAGAATTCGTGC 1014
Query 945 TTTTCTTCGGATTCGTCTGAGAGATTATGGGAG-TTTGGACTTTGATTCAGTTGATGCTC 1003
||| |||||||||||| ||||||| ||| |||| ||| || ||||||||| ||||||||
Sbjct 1015 TTTCCTTCGGATTCGTTTGAGAGACTAT-GGAGTTTTAGATTTTGATTCAACTGATGCTC 1073
Query 1004 GTAGGCAGCCTCCAGTTGATACTACTTGGCAGCAGATATATTTTTGCTTGAGAACTGGTT 1063
||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||| |
Sbjct 1074 GTAGGCAGCCTCCTGTTGATACTACTTGGCAACAGATATATTTTTGCTTGCGAACTGGGT 1133
Query 1064 ATTATGAGGAAGCTAGAGAAATTGCCCAGTCATCTCGGTCATCTCAACAACAGTTTGCTC 1123
|||||||||| ||||| ||||| || | | || | ||||||||||| | | | ||||| |
Sbjct 1134 ATTATGAGGAGGCTAGGGAAATCGCTCGGGCAACGCGGTCATCTCAGC-A-A-TTTGCAC 1190
Query 1124 CTCTGCTTACAGAGTGGATTACAACAGGTGGTACT-GTGGCTGCACAAACCGCTGCTACT 1182
| |||||||| ||||||||||| |||| ||||| | ||||||||| | | || |||| |
Sbjct 1191 CACTGCTTACCGAGTGGATTACCACAGATGGTA-TGGTGGCTGCAGAGTCTGCAGCTATT 1249
Query 1183 GCTTCTGAGGAATGTGAGAAATTGTTAAGGATGGGTGATCGGTTTGGCCAAACAACATAT 1242
|| || || |||||||||||| || ||||||||||||||||||| || | ||| | |||
Sbjct 1250 GCATCAGAAGAATGTGAGAAAATGCTAAGGATGGGTGATCGGTTGGGTCGAACCGCTTAT 1309
Query 1243 GACAAGAAGAAGCTTCTACTCTACACTATCATATCTGGTTCCCGAAGACAAATTGATCGC 1302
|||||||| || || ||||||||||||||||| ||||||||||| || ||| |||| |||
Sbjct 1310 GACAAGAAAAAACTCCTACTCTACACTATCATTTCTGGTTCCCGTAGGCAAGTTGAGCGC 1369
Query 1303 ATCA-TGAGAGATTTTTCGACCCTCTTTAACACAATAGAAGATTTTC-TCTGGTTCAAAC 1360
|| | |||| ||| | || || |||||||||||||| ||||| |||| | |||||||||
Sbjct 1370 AT-ACTGAGGGATCTATCTACACTCTTTAACACAATTGAAGA-TTTCTTATGGTTCAAAT 1427
Query 1361 TATCATGTGTACGTGACGT-AGCTGGTGGATCTTCATCTATGATCGTGAATGATGGGCTA 1419
| ||||| || | ||||| | |||||| |||||||||| || || |||||||||| ||
Sbjct 1428 TGTCATGCATAAGAGACGTCA-CTGGTGTATCTTCATCTCTGGTCCTGAATGATGGCCTT 1486
Query 1420 GTGCCATACAGTTTGGATGATCTCCAGGCCTATCTTAATAAGTTTGAGCCATCTTACTAC 1479
| ||| ||||||||||||||||| ||||| ||||| ||||| || ||||| || ||||||
Sbjct 1487 GCGCCTTACAGTTTGGATGATCTTCAGGCTTATCTCAATAAATTCGAGCCTTCATACTAC 1546
Query 1480 ACTAAGAATGGGAAAGA-CCCTCTGGTATACCCATATGTTTTGCTTCTTAGCATTCAGTT 1538
|| |||||||| ||||| |||| | ||||| ||||||||||||||||| |||||||||||
Sbjct 1547 ACGAAGAATGGAAAAGACCCCT-TAGTATATCCATATGTTTTGCTTCTCAGCATTCAGTT 1605
Query 1539 ACTACCGGCGATCATGCACATGTCCAACGAAGCTGGAGATGAAGGGTATAACATTGATGC 1598
|||||||| ||||||||| | || || ||||| ||||| | ||||||||| ||||||||
Sbjct 1606 GCTACCGGCTATCATGCACTTATCTAAAGAAGCAGGAGACGGAGGGTATAATATTGATGC 1665
Query 1599 TGTCCATGTAGCTATATCGCTAGTGGACCATTCCATTCTCTCTGAAGGATCTGGGACTGG 1658
| | || ||||||| || | |||||||||||| || | |||||||| |||||||||||
Sbjct 1666 TATTCACATAGCTATTTCTTTGGTGGACCATTCCGTTTTATCTGAAGGCTCTGGGACTGG 1725
Query 1659 GCGCAAACTAAGTGTGATGGATGCTAATGCCGAGGCATCTAGCATGATTAGGCAATATGG 1718
| ||||||||||||||||||| |||| || |||||||||||||||||||||||||||||
Sbjct 1726 CCACAAACTAAGTGTGATGGATTCTAACGCTGAGGCATCTAGCATGATTAGGCAATATGG 1785
Query 1719 GTCGATGTATT-TGCATCATGGTGATCTGCAAATGACGCTGGAATACTATGCACAAGCTG 1777
||| |||| | ||||||| || ||||| ||||||||| | || || |||||||||||||
Sbjct 1786 GTCAATGT-TCCTGCATCACGGAGATCTCCAAATGACGGTAGAGTATTATGCACAAGCTG 1844
Query 1778 CTATTGCAGTAGGTGGGGGTCAAC-AGGCTTGGTCTGGAAGAAGTAATGTTGATCAACAA 1836
|| ||| ||||||||||| ||| || |||||||||||||||||||||| ||||||||
Sbjct 1845 CTGCTGCTGTAGGTGGGGGACAATTAG-CTTGGTCTGGAAGAAGTAATGTGGATCAACAG 1903
Query 1837 AGGCAAAGGAACTTGATGCTGAAGCAACTACTGACTGAGATTTTG-T-C-ACAAGAGGAT 1893
||||| || ||||| ||||||||||| ||||| ||||||||| || | | | || || |
Sbjct 1904 AGGCAGAGAAACTTAATGCTGAAGCAGCTACTAACTGAGATTCTGCTTCGAGAA-AG-A- 1960
Query 1894 GGTATTCACTTTCTGCTTGGTGCTAGAGGTTCCGGTGAAGAAGG-CGAGCTTGGAAGATT 1952
|||||| ||||| ||||||| || |||||||| ||||||||||| | |||||||||||||
Sbjct 1961 GGTATTTACTTTTTGCTTGGAGCAAGAGGTTCTGGTGAAGAAGGTC-AGCTTGGAAGATT 2019
Query 1953 TCTGCCTGATA-TAAAATTGAGGCAGCAGTTCTTGATCGAAGCTGCGCATCAATTTCAAG 2011
| | |||||| || | ||||| || ||||||||| |||||||||| ||||||| |||||
Sbjct 2020 TTTCCCTGATTCTAGA-TTGAGACAACAGTTCTTGGTCGAAGCTGCACATCAATGTCAAG 2078
Query 2012 AAGCTGGATTATATGACAAATCAATAGA-ACTACAGAAGAGAGTTGGTGCGTTTTCGTCT 2070
|||||||||||||||||||||| ||||| | |||||||||| || ||||| ||| || ||
Sbjct 2079 AAGCTGGATTATATGACAAATCCATAGAGA-TACAGAAGAGGGTGGGTGCATTTGCGGCT 2137
Query 2071 GCCTTGGAAACGATAAACAAATGTCTATCTGAAGCCATTTGCTCCCTTGTCCGTGGAAGG 2130
|||||||| || |||||||| ||||||||||||||||| || || |||| ||||||||||
Sbjct 2138 GCCTTGGAGACTATAAACAAGTGTCTATCTGAAGCCATCTGTTCTCTTGCCCGTGGAAGG 2197
Query 2131 CCAGATGGTGAAAGCCGAACAG-AGGGGCTTGTTCTCTC-GGGCAATGACATTCTCAATT 2188
|||||||||||| ||||| |||| ||| ||||| | ||| || || ||||| |
Sbjct 2198 TTGGATGGTGAAAGCAGAACATCAGGG-CTTATTCTCGCAGGG-AACGATATTCTTGAGA 2255
Query 2189 CTTACAAATATCACCCTGATGTCAGTGC-CCAGGAAAGACATCTTGTTATGGAACAAGAA 2247
||||||||||| ||||||| |||||| | |||||||||| | | || ||||||||||||
Sbjct 2256 CTTACAAATATTACCCTGAAGTCAGT-CTCCAGGAAAGAGAGCGAGTGATGGAACAAGAA 2314
Query 2248 ACAATACTAAGAGAGCTTGAGGCAATATTATCGATCCACAAGTTGGCCAGACTAAACAAA 2307
|| |||||||||||||||||||||||| |||||||||||||||||| ||| || |||
Sbjct 2315 ACCATACTAAGAGAGCTTGAGGCAATACTATCGATCCACAAGTTGGGTAGATTAGGCAAT 2374
Query 2308 CATCTAGATGCCATAAGAGAAGTCGCGAAACTTCCATTCCTTCATCTCGATCCAAGACAA 2367
||||| ||||| |||| ||| | || |||||||||||||||||||| |||||||||
Sbjct 2375 CATCTGGATGCTTTAAGGGAAATTGCAAAACTTCCATTCCTTCATCTTGATCCAAGAGTG 2434
Query 2368 CCAGACACCACCTCGGATGAGTTCCAGAAAGCATCTTCTTACTTTCAGACTTGTGTCCCT 2427
|| || | ||| | |||| |||||||| |||||| ||||||| ||| ||||||||||
Sbjct 2435 CCCGATGCAACCGCTGATGTGTTCCAGAGCGCATCTCCTTACTTCCAGGCTTGTGTCCCG 2494
Query 2428 GATTTACTTAAGGTTGCTCTGACCTGTTTGGATAACGTAGCTGACACTGATGGATCAATC 2487
|| | || || |||||||| || ||| |||| || ||| ||||||||||||| || |||
Sbjct 2495 GACCTGCTCAAAGTTGCTCTAACGTGTCTGGACAATGTACCTGACACTGATGGGTCGATC 2554
Query 2488 AGGGGCATGAGATCTAAGATTGCTGGGTTTCTTGCAAGCAACACACAGCGGAACTGGCCT 2547
| | ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 2555 CGTGCCATGAGATCCAAGATTGCTGGGTTTCTTGCAAGCAACACGCACCGGAACTGGCCT 2614
Query 2548 CGAGATTTGTACGAGAAGATAGCTCGAAGCTTTTGAAT 2585
|| || |||||||||||| | |||||||||||||||||
Sbjct 2615 CGTGACTTGTACGAGAAGGTGGCTCGAAGCTTTTGAAT 2652
> Ahg938710 jgi|Araly1|938710|scaffold_502901.1
Length=2649
Score = 2390 bits (1294), Expect = 0.0
Identities = 1468/1550 (95%), Gaps = 20/1550 (1%)
Strand=Plus/Plus
Query 1070 AGGAAGCTAGAGAAATTGCCCAGTCATCTCGGTCATCTCAACAACAGTTTGCTCCTCTGC 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1098 AGGAAGCTAGAGAAATTGCCCAGTCATCTCGGTCATCTCAACAACAGTTTGCTCCTCTGC 1157
Query 1130 TTACAGAGTGGATTACAACAGGTGGTACTGTGGCTGCACAAACCGCTGCTACTGCTTCTG 1189
|||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||
Sbjct 1158 TTACAGAGTGGATTACCACAGGTGGTACTGTGGCTGCACATACCGCTGCTATTGCTTCTG 1217
Query 1190 AGGAATGTGAGAAATTGTTAAGGATGGGTGATCGGTTTGGCCAAACAACATATGACAAGA 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1218 AGGAATGTGAGAAATTGTTAAGGATGGGTGATCGGTTTGGCCAAACAACATATGACAAGA 1277
Query 1250 AGAAGCTTCTACTCTACACTATCATATCTGGTTCCCGAAGACAAATTGATCGCATCATGA 1309
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct 1278 AGAAGCTCCTACTCTACACTATCATATCTGGTTCCCGAAGGCAAATTGATCGCATCTTGA 1337
Query 1310 GAGATTTTTCGACCCTCTTTAACACAATAGAAGATTTTCTCTGGTTCAAACTATCATGTG 1369
| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1338 GGGATTTTTCTACGCTCTTTAACACAATAGAAGATTTTCTCTGGTTCAAACTATCATGTG 1397
Query 1370 TACGTGACGTAGCTGGTGGATCTTCATCTATGATCGTGAATGATGGGCTAGTGCCATACA 1429
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||
Sbjct 1398 TACGTGACGTAGCTGGTGGATCTTCATCTGTGATCTTGAATGATGGGCTAGTGCCTTACA 1457
Query 1430 GTTTGGATGATCTCCAGGCCTATCTTAATAAGTTTGAGCCATCTTACTACACTAAGAATG 1489
||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1458 GTTTGGATGATCTTCAGGTTTATCTTAATAAATTTGAGCCATCTTACTACACTAAGAATG 1517
Query 1490 GGAAAGACCCTCTGGTATACCCATATGTTTTGCTTCTTAGCATTCAGTTACTACCGGCGA 1549
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1518 GCAAAGACCCTCTGGTATACCCATATGTTTTGCTTCTTAGCATCCAGTTACTACCGGCGA 1577
Query 1550 TCATGCACATGTCCAACGAAGCTGGAGATGAAGGGTATAACATTGATGCTGTCCATGTAG 1609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1578 TCATGCACATGTCCAACGAAGCTGGAGATGAAGGGTATAACATTGATGCTGTCCATGTAG 1637
Query 1610 CTATATCGCTAGTGGACCATTCCATTCTCTCTGAAGGATCTGGGACTGGGCGCAAACTAA 1669
|||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct 1638 CTATTTCGCTAGTGGACCATTCCATTCTATCTGAAGGATCTGGGACTGGGCACAAACTAA 1697
Query 1670 GTGTGATGGATGCTAATGCCGAGGCATCTAGCATGATTAGGCAATATGGGTCGATGTATT 1729
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1698 GTGTGATGGATGCTAATGCCGAGGCATCTAGCATGATTAGGCAATATGGGTCAATGTATT 1757
Query 1730 TGCATCATGGTGATCTGCAAATGACGCTGGAATACTATGCACAAGCTGCTATTGCAGTAG 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1758 TGCATCATGGTGATCTGCAAATGACGCTGGAATACTATGCACAAGCTGCTATTGCAGTAG 1817
Query 1790 GTGGGGGTCAACAGGCTTGGTCTGGAAGAAGTAATGTTGATCAACAAAGGCAAAGGAACT 1849
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1818 GTGGGGGGCAACAAGCTTGGTCTGGAAGAAGTAATGTTGATCAACAAAGGCAAAGGAACT 1877
Query 1850 TGATGCTGAAGCAACTACTGACTGAGATTTTGTCACAAGAGGATGGTATTCACTTTCTGC 1909
||||||| ||||||||||||||||||||||||| ||||||| ||||| || ||||||| |
Sbjct 1878 TGATGCTAAAGCAACTACTGACTGAGATTTTGTTACAAGAGAATGGTGTTTACTTTCTAC 1937
Query 1910 TTGGTGCTAGAGGTTCCGGTGAAGAAGGCGAGCTTGGAAGATTTCTGCCTGATATAAAAT 1969
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1938 TTGGTGCTAGAGGTTCCGGTGAAGAAGGTGAGCTTGGAAGATTTCTGCCTGATATAAAAT 1997
Query 1970 TGAGGCAGCAGTTCTTGATCGAAGCTGCGCATCAATTTCAAGAAGCTGGATTATATGACA 2029
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 1998 TGAGGCAGCAGTTCTTGATCGAAGCTGCACATCAATGTCAAGAAGCTGGATTATATGACC 2057
Query 2030 AATCAATAGAACTACAGAAGAGAGTTGGTGCGTTTTCGTCTGCCTTGGAAACGATAAACA 2089
|||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2058 AATCGATAGAACTACAAAAGAGAGTTGGTGCGTATTCGTCTGCCTTGGAAACGATAAACA 2117
Query 2090 AATGTCTATCTGAAGCCATTTGCTCCCTTGTCCGTGGAAGGCCAGATGGTGAAAGCCGAA 2149
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||
Sbjct 2118 AATGTCTATCTGAAGCCATTTGCTCCCTCGTCCGTGGAAGGCCAGATGGTGAAACCCAAA 2177
Query 2150 CAGAGGGGCTTGTTCTCTCGGGCAATGACATTCTCAATTCTTACAAATATCACCCTGAT- 2208
||||||||||||||||||| ||||| || ||||||||| | ||||||||||||||||||
Sbjct 2178 CAGAGGGGCTTGTTCTCTCAGGCAACGATATTCTCAATGCATACAAATATCACCCTGATT 2237
Query 2209 GTCAG-T----G-------C-----CCAGGAAAGA-CATCTTGTTATGGAACAAGAAACA 2250
|||| | | | |||||||||| | || ||||||||||||||||||
Sbjct 2238 GTCACATTCTTGTATATTACAGTGGCCAGGAAAGAGC-TCGGGTTATGGAACAAGAAACA 2296
Query 2251 ATACTAAGAGAGCTTGAGGCAATATTATCGATCCACAAGTTGGCCAGACTAAACAAACAT 2310
|||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 2297 ATACTAAGAGAGCTTGAGGCAATACTATCGATCCACAAGTTAGCCAGACTAAACAAACAT 2356
Query 2311 CTAGATGCCATAAGAGAAGTCGCGAAACTTCCATTCCTTCATCTCGATCCAAGACAACCA 2370
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct 2357 CTAGATGCCATAAGAGAAGTCGCGAAACTTCCGTTCCTTCATCTCGATCCAAGACTACCC 2416
Query 2371 GACACCACCTCGGATGAGTTCCAGAAAGCATCTTCTTACTTTCAGACTTGTGTCCCTGAT 2430
||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 2417 GACACCACCTCAGATGAGTTCCAGAGAGCATCCTCTTACTTTCAGACTTGTGTCCCTGAT 2476
Query 2431 TTACTTAAGGTTGCTCTGACCTGTTTGGATAACGTAGCTGACACTGATGGATCAATCAGG 2490
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2477 TTACTTAAGGTTACTCTGACCTGTTTGGATAACGTAGCTGACACTGATGGATCGATCAGG 2536
Query 2491 GGCATGAGATCTAAGATTGCTGGGTTTCTTGCAAGCAACACACAGCGGAACTGGCCTCGA 2550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2537 GGCATGAGATCTAAGATTGCTGGGTTTCTTGCAAGCAACACACAGCGGAACTGGCCTCGA 2596
Query 2551 GATTTGTACGAGAAGATAGCTCGAAGCTTTTGAATCTAAGAAATTCGAAT 2600
||||||||||||||| | ||||||||||||||||||||||||| || |||
Sbjct 2597 GATTTGTACGAGAAGGTTGCTCGAAGCTTTTGAATCTAAGAAACTCAAAT 2646
Score = 1520 bits (823), Expect = 0.0
Identities = 898/935 (96%), Gaps = 2/935 (0%)
Strand=Plus/Plus
Query 105 GAATTTGGATCAATTGGAAGCATTGTCGAGGAAACTCAAAGCTAAAACCCTAAGAAACGA 164
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 166 GAATTTGGATCAATTGGAAGCATTGTCGAGGAAACTCAAGGCTAAAACCCTAAGAAACGA 225
Query 165 AGCTCCTTCACAGTCTATTGCTGCCACTAGACTACTTGCACGGGAGGGAATCAATGCAGA 224
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 226 AGCTCCTTCACAGTCTATTGCTGCCACAAGACTCCTTGCACGGGAGGGAATCAATGCAGA 285
Query 225 TCAATTATCTCGTGATCTTAAGTCATTTGAGTTGAAGACGACTTTTGAAGATGTATTCCC 284
||||||| ||||||||||||||||||||||||||||||| || ||||| |||||||||||
Sbjct 286 TCAATTAGCTCGTGATCTTAAGTCATTTGAGTTGAAGACCACATTTGAGGATGTATTCCC 345
Query 285 TGCGGAGACAACAAGTGTTGAAGAATACCTGCAACAGGTTCATGAAATGGCAATGGTATC 344
||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 346 TGCCGAGACAACAAATGTTGAAGAATACCTGCAACAGGTTCATGAAATGGCTATGGTATC 405
Query 345 GGCTATACAGGAGGCCCAGAAAGATAATGTTCGAAGCTTTAACAACTACATGTTGAAAGT 404
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 406 GGCTATACAGGAGGCTCAAAAAGATAATGTTCGAAGCTTTAACAACTACATGTTGAAAGT 465
Query 405 GTTGGAGGAGGACTGTATAAAAGAAAAACGTGACTTTCTTCACAGCCTTAGCAAAACTTC 464
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||
Sbjct 466 GTTGGAGGAGGACTGTAGGAAAGAAAAACGTGACTTTCTTCATAGCCTTAGCAAAATTTC 525
Query 465 AATGTTACCTAAGACCAAGATGATCAATTCAAGTAGAGGCTCTCATGCTGGTTCACTAGT 524
|||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||||||
Sbjct 526 AATGTTACCTAAGAACAAGATGATCGATTCAAGCAGAGGCTCTCATGCTGATTCACTAGT 585
Query 525 GCCTTTGAGTCCCCAAGTATCTTCAAAACCTGGAACGGAACTCGTGTCTATGACTAACAA 584
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 586 GCCTTTGAGTCCTCAAGTATCTTCAAAACCTGGAACGGAGCTCGTGTCTATGACTAACAA 645
Query 585 ACCCATTCATGAGAAAAAGGCATATGTCTATGCCGAGGTTGTGAAAAAACTAAACTCTGC 644
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 646 ACCCATTCATGAGAAAAAGGCTTATGTCTATGCCGAGGTTGTGAAGAAACTAAACTCTGC 705
Query 645 AAGAGAACGAGGCTTGCCATTTAAACTTGCAACATTGTTCAACGGTGCATATGAAAGTCT 704
|||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||
Sbjct 706 AAGAGAACGAGGCTTGCCATTTAAACCTGCAACATCGTTCAATGGTGCATATGAAAGTCT 765
Query 705 AGAAATTGATTTGACTCGTGGAAAATCAGTCAACATGCA-AAAATTATGGCAGCTTATTC 763
|| |||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||
Sbjct 766 AGGAATTGATTTGACTCGTGGAAAATCAGTCAACATGCAGAAAA-TATGGCAACTTATTC 824
Query 764 AGGGAATGACGGGTGAAGAGTCAGCAGTACAACATGGTGTTTCCAAGAGGATGGCCCTCG 823
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 825 AGGCAATGACGGGTGAAGATTCAGCAGTACAACATGGTGTTTCCAAGAGGATGGCCCTCG 884
Query 824 TGATAGGTGCAAGACGCCACTTGGAATGTGGGCATGGGAAACATATAATGGATACAATTC 883
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 885 TGATAGGTGCAAGACGCCACTTGGAATGTGGGCATGAGAAACATATAATGGATACAATTC 944
Query 884 AAAGTCATCCTACACAAGCTGCTCTTGGTGGATCAGTTGGAAATTTGCAAAGAATTCGTG 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 AAAGTCATCCTACACAAGCTGCTCTTGGTGGATCAGTTGGAAATTTGCAAAGAATTCGTG 1004
Query 944 CTTTTCTTCGGATTCGTCTGAGAGATTATGGGAGTTTGGACTTTGATTCAGTTGATGCTC 1003
||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||
Sbjct 1005 CTTTTCTTCGGATTCGTCTGAGAGATTATGGGATTTTGGATTTTGATTCAGGTGATGCTC 1064
Query 1004 GTAGGCAGCCTCCAGTTGATACTACTTGGCAGCAG 1038
|||||||||||||||||||||||||||||||||||
Sbjct 1065 GTAGGCAGCCTCCAGTTGATACTACTTGGCAGCAG 1099
Score = 161 bits (87), Expect = 2e-38
Identities = 97/102 (95%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 ATGGCGAACGACCAGGAGATGAGTGGATGGACTGATCTTCTCCATTCTTCGACTAAGCTT 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 23 ATGGCGAACGACCAGGAGATGAGTGGATGGACTGATCTTCTCCATTCTTCTACTAAGCTC 82
Query 61 CTGGAGCAAGCGGCTCCTTCTTCTCAGTTTCCTCCTCTTCAG 102
|| ||||||||| ||||||| |||||||||||||||||||||
Sbjct 83 CTTGAGCAAGCGACTCCTTCGTCTCAGTTTCCTCCTCTTCAG 124
> Ahg486177 jgi|Araly1|486177|fgenesh2_kg.5__2169__AT3G57340.1
Length=1383
Score = 154 bits (83), Expect = 4e-36
Identities = 89/92 (97%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 2704 GGTTAGCAAAAGCAAAATCTTAACATAGAGATAATCACACAAAATCCAAAGATCGTATGT 2763
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1383 GGTTAGCAAAAACAAAATCTTAATATAGAGATAATCACACAAAATCCAAAGATCGTATGT 1324
Query 2764 TAGGTTCTAAAGCATTATAATCCAAAACAAAA 2795
||||||||||||| ||||||||||||||||||
Sbjct 1323 TAGGTTCTAAAGCGTTATAATCCAAAACAAAA 1292
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105738520120
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5