BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G57730.1 Length=1599 Score E Sequences producing significant alignments: (Bits) Value Ahg486223 jgi|Araly1|486223|fgenesh2_kg.5__2215__AT3G57730.1 1024 0.0 Ahg938756 jgi|Araly1|938756|scaffold_502947.1 797 0.0 Ahg938755 jgi|Araly1|938755|scaffold_502946.1 745 0.0 Ahg898723 jgi|Araly1|898723|Al_scaffold_0005_2689 84.2 3e-15 > Ahg486223 jgi|Araly1|486223|fgenesh2_kg.5__2215__AT3G57730.1 Length=1465 Score = 1024 bits (554), Expect = 0.0 Identities = 673/730 (92%), Gaps = 9/730 (1%) Strand=Plus/Plus Query 849 ATAGAAGCGGAAGACGTGCTGGGTACATATGGTTACCTTGATCCATTATACTTTGCAACT 908 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 737 ATAGAAGCGGAAGACGTGCTGGGCACATATGGTTACCTTGATCCATTATACTTTGCAACT 796 Query 909 AGAATTGTGACAGAATATACGGATGTGTACAGCTTTGGAGTCTTTTTGATGGTTGTTATC 968 |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 797 AGAATTGTGACAGAGTATACTGATGTGTACAGCTTTGGAGTCCTTTTGATGGTTGTTATG 856 Query 969 ACTGGTATATCGGTTTACTTCACCGGATCTGATGGGTATCCTGTAGGTATTCTTGGATAT 1028 ||||| | ||||||||||||||| ||| |||| || |||| ||||||||||||| |||| Sbjct 857 ACTGGCAGATCGGTTTACTTCACTGGACCTGACGGATATCGAGTAGGTATTCTTGCATAT 916 Query 1029 ATGAAAGGCTTAGCTGAGAATGGGAAGCTCAATGAAATAGTATATCCTATGATAATGAAA 1088 ||||||| ||| |||||||||||||||||| |||| || ||| ||||||||| ||| || Sbjct 917 GTGAAAGGTTTATCTGAGAATGGGAAGCTCAGTGAAGTAATATGTCCTATGATGATGCAA 976 Query 1089 GAGATGACAAGTGCTCAAAGATTGCAGGTGGAAGCATGCGTTTTACTTGCACTGAGATGC 1148 || |||||||||||||||||||||||||||||||| || ||||||||||||||||||||| Sbjct 977 GACATGACAAGTGCTCAAAGATTGCAGGTGGAAGCGTGTGTTTTACTTGCACTGAGATGC 1036 Query 1149 TGCGAGGAGAGGGTAGAAGACAGACCGAAGATGATTCAGGTAGCTAAAGAACTCAAGCGG 1208 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1037 TGCGAGGAGAGGGTTGAAGACAGACCGAAGATGATTCAGGTAGCTAAAGAACTCAAGCGG 1096 Query 1209 ATTGAACATCATGTTTTGAGATCCTAGCTAGAGATCAGCTCTACTCTTAGACTGTATAGC 1268 || |||||||||||||||||||||||||||| |||| || |||||| |||||||||||| Sbjct 1097 ATAGAACATCATGTTTTGAGATCCTAGCTAGTGATCCTCTATACTCTCAGACTGTATAGC 1156 Query 1269 CAAGTTTCAAATTTATTACTTTTGAAAGTTTGGAACGC-ATATGATTGTGGACCTGAAGG 1327 |||||||||||||||||| || |||||||||||||| | | |||| |||||||||||| Sbjct 1157 CAAGTTTCAAATTTATTAGTTCTGAAAGTTTGGAACTCAAGCGGATTATGGACCTGAAGG 1216 Query 1328 ATGCCAAAGAGTTTAAGGGGTTAGAAAGACTTGTGAAAGCCTCTATGTCCGACCCAAACA 1387 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1217 ATGCCAAAGAGTTTAAGGGGTTAGAAAGACTT-TGAAAGCCTCTATGTCCGACCCAAACA 1275 Query 1388 AAGTCTACTTTGTGTAGAGTTGTCTAAAAGCCTATGCTTATATATGGTCTTTCTCTGTTT 1447 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1276 AAGTCTACTTTGTGTAGAGTTGTCTAAAAGCCTTTGCTTATATATGGTCTTTCTCTGTTT 1335 Query 1448 TTCAGTTTTCTCTAGTATTTTTGTTGTTATGTA---TGGCTAGATTTCAGTTTGGCCCTG 1504 ||||| |||||||||||||||||||| |||||| ||||||||||||||||||| ||| Sbjct 1336 TTCAGATTTCTCTAGTATTTTTGTTGATATGTAACATGGCTAGATTTCAGTTTGGGCCTA 1395 Query 1505 ATGGCGTCATAATGAAACTGCAAAGCT----CTGCATTATTAGTTTCAGAACTTACAAAG 1560 ||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| Sbjct 1396 ATGGCGTCATAATGAAACTGCAAAGCTATTTCTGCATTATTAGTTCCAGAAGTTACAAAG 1455 Query 1561 ATGGTTTACA 1570 ||| |||||| Sbjct 1456 ATGATTTACA 1465 Score = 852 bits (461), Expect = 0.0 Identities = 548/590 (93%), Gaps = 6/590 (1%) Strand=Plus/Plus Query 183 AAGAAATTGAAGCAAAATCTGAGAACTGGGTCCTG-gaaaaagaaggaaaaaagcatgaa 241 ||||| ||||| |||||||||||| |||||||| | |||||||| ||||||||||||||| Sbjct 149 AAGAAGTTGAAACAAAATCTGAGATCTGGGTCC-GTGAAAAAGACGGAAAAAAGCATGAA 207 Query 242 gaaggaaagATGGTTCTTAGAGAATGGAAGTATCTTCTTAAAAGAGCTCATCGTTGATTG 301 ||||||||||||||| || ||||| |||||||||||||||||||||||||||| |||||| Sbjct 208 GAAGGAAAGATGGTTTTTGGAGAACGGAAGTATCTTCTTAAAAGAGCTCATCGCTGATTG 267 Query 302 TAATGGTAAATCCATTCCTATACGTAGCTTTACTTCTTCCCAGATTCGTAAAGCCACCAA 361 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 268 TAATGGTAAATCCATTCCTATACGTAGCTTTACCTCTTCCCAGATTCGCAAAGCCACCAA 327 Query 362 GAATTTCGATTTAAGCTGTTTTGT-AGCTGAAGAAGGGTTCTACATATGGTACAAAGGTG 420 ||||||||||| || |||||||| | ||||||||||||||||||||||||||||||||| Sbjct 328 GAATTTCGATTCCAGTTGTTTTGTCA-CTGAAGAAGGGTTCTACATATGGTACAAAGGTG 386 Query 421 TAATCGAAGATAGATCTTACATGATCAAGAGATTCTCTGAGTATAAAGTCACTGATTACA 480 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 387 TTATCGAAGATAGATCTTACATGATCAAGAGATTCTCTGAGTATAAAGTCACAGATTACA 446 Query 481 GAGTAAGTGAGGTTTATAAAGACATTGTCTTGTCTGCTCGTATGAGCAACCACAACAACT 540 ||||| | |||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 447 GAGTAGGAGAGGTTTATAAAGACATTGTCTTGTCTGCTCGGATGAGCAACCACAGCAACT 506 Query 541 TTCTTAAACTACTAGGATGTTGTCTTGAGTTCCCTTTTCCTGTTCTTGTGTTTGAATTTG 600 ||||| || || |||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 507 TTCTTCAATTATTAGGATGTTGTCTTGATTTCCCTTTTCCGGTTCTTGTGTTTGAATTTG 566 Query 601 CTGAGCATGGAGTTTTGAATTACCGAGGAGGTATTACGGTTAACGGTGAAGAGTCTTTAT 660 |||| |||||| |||||||| | ||||||||| |||| |||||||| || || ||||||| Sbjct 567 CTGAACATGGATTTTTGAATCATCGAGGAGGTGTTACCGTTAACGGGGAGGAATCTTTAT 626 Query 661 TGCCTTTGAGTTTGAGGTTGAAGATTGGGAAGGAGATTGCAAATGCCTTGGCTTATCTTC 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 627 TGCCTTTGAGTTTGAGGTTGAAGATTGGGAAGGAGATTGCAAATGCCTTGGCTTATCTTC 686 Query 721 ACATGGCGTTTCC-TAAGATCATCATATATAGAGATGTGAAGCCACTGCA 769 ||||||| ||||| ||||||||| |||| |||||||||||||||| |||| Sbjct 687 ACATGGC-TTTCCCTAAGATCATTATATTTAGAGATGTGAAGCCAATGCA 735 Score = 150 bits (81), Expect = 3e-35 Identities = 104/115 (90%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 1 GTCTATCATTTCGTTCTGTGGAATTTTCAACGATGGGTTTTGTCTTCTGTATTCAAGCCG 60 |||| |||||||||||||||||||||||||||||||||| ||||| ||| ||||| ||| Sbjct 1 GTCTCTCATTTCGTTCTGTGGAATTTTCAACGATGGGTTCCGTCTTTTGTCTTCAAACCG 60 Query 61 GGAAAAGGTGCTGTCTTTGTAATGCACCCAGAAAGTTTAAAGAGTGGATTTTCAG 115 ||||||||| ||||||| || ||||||||||||||||||||| ||||||||||| Sbjct 61 GGAAAAGGTACTGTCTT-GTT-TGCACCCAGAAAGTTTAAAGATTGGATTTTCAG 113 > Ahg938756 jgi|Araly1|938756|scaffold_502947.1 Length=1125 Score = 797 bits (431), Expect = 0.0 Identities = 890/1108 (80%), Gaps = 46/1108 (4%) Strand=Plus/Plus Query 158 TATTTGTTGAATGGAATCGATGGTGAAGAAATTGAAGCAAAATCTGAGAACTGGGTC--C 215 |||||||| |||| |||| || |||||||| |||||||| | ||||||| |||| || | Sbjct 12 TATTTGTTAAATGAAATCAATTGTGAAGAAGTTGAAGCAGAGTCTGAGATCTGGATCGTC 71 Query 216 TG-gaaaaagaagg---a--aaaaag-ca-tgaagaaggaaagATGGTTCTTAGAGAATG 267 | ||||| ||||| | |||||| || | | ||| ||||| || ||||| || || | Sbjct 72 AGAGAAAAGGAAGGAAAAGGAAAAAGACATTCAGGAA-GAAAGGTGTTTCTTGGAAAACG 130 Query 268 GAAGTATCTTCTTAAAAGAGCTCATCGTTGATTGTAATGGTAAATCCATTCCTATACGTA 327 |||| |||||||| ||||| || || | ||||||||| |||||||||||||||||||||| Sbjct 131 GAAGCATCTTCTTGAAAGAACTTATTGCTGATTGTAACGGTAAATCCATTCCTATACGTA 190 Query 328 GCTTTACTTCTTCCCAGATTCGT-AAAGCCACCAAG-AATTTCGATTTAAGCTGTTTTGT 385 ||||| ||||| |||| || | ||||| | |||| || |||| || || |||||||| Sbjct 191 GCTTTTCTTCTGATCAGA-TCTTGAAAGCTA-CAAGTAACTTCGGTTCCAGTTGTTTTGT 248 Query 386 AGCTGAAGAAGGGTTCTACATATGGTACAAAGGTGTAATCGAAGATAGATCTTACATGAT 445 | | | || ||||||||| | |||||||||||| | || |||||||||||||||||||| Sbjct 249 AACCGCTGAGGGGTTCTACGTGTGGTACAAAGGTATCATAGAAGATAGATCTTACATGAT 308 Query 446 CAAGAGATTCTCTGAGTATAAAGTCACTGATTACAGAGTAAG-TGAGGTTTATAAAGACA 504 |||||||||||| ||||||||||| ||| |||||||||| || |||||||| || || | Sbjct 309 CAAGAGATTCTCCGAGTATAAAGTTACTCATTACAGAGT-AGCAGAGGTTTACAACGAGA 367 Query 505 TTGTCTTGTCTGCTCGTATGAGCAACCACAACAACTTTCTTAAACTACTAGGATGT-TGT 563 |||| ||||||||||| |||||||||||||||||||||||||||||| |||||| | ||| Sbjct 368 TTGTTTTGTCTGCTCGGATGAGCAACCACAACAACTTTCTTAAACTAGTAGGAT-TCTGT 426 Query 564 CTTGAGTTCCCTTTTCCTGTTCTTGTGTTTGAATTTGCTGAGCATGGAGTTTTGAATTAC 623 |||||||| | |||| |||||||||||||||| ||| |||||||||||| ||||| || Sbjct 427 CTTGAGTTTTGTCTTCCGGTTCTTGTGTTTGAATATGCAGAGCATGGAGTTCTGAATCAC 486 Query 624 CGAGGAGGTATTACGGTTAACGGTGAAGAGTCTTTATTGCCTTTGAGTTTGAGGTTGAAG 683 |||||||| ||| |||||| || || || | | |||||||||||||||| ||||||||| Sbjct 487 AGAGGAGGTGTTATGGTTAATGGGGAGGAATATATATTGCCTTTGAGTTTAAGGTTGAAG 546 Query 684 ATTGGGAAGGAGATTGCAAATGCCTTGGCTTATCTTCACATGGCGTTTCCTAAGATCATC 743 ||||| |||||||||||||||||| || ||||||||||||||||||| || |||||| || Sbjct 547 ATTGGAAAGGAGATTGCAAATGCCGTGACTTATCTTCACATGGCGTTCCCCAAGATCCTC 606 Query 744 ATATATAGAGATGTGAAGCCACTGCATGTTTTCTTGGACAATAATTGGACTGCAAAGTTG 803 ||| ||||| | | || ||| | ||||||| |||||||| |||||||||||||||||| Sbjct 607 ATACATAGACACATTAATCCAAGGAATGTTTTTTTGGACAAGAATTGGACTGCAAAGTTG 666 Query 804 TCTGATTTATCTTTCTCAAT-ATCGCTGGAAGAGGGAAAATCACA-GATAGAAGCGGAA- 860 |||||||| || |||| || | | | |||||||||||| | |||||||| ||| Sbjct 667 TCTGATTTCTCCATCTCCATAAAC-ATCCCTGAGGGAAAATCA-AGGATAGAAGTTGAAT 724 Query 861 GACGTGCTGGGTACATAT-GGTTACCTTGATCCATTATACTT-TGCAACTAGAATTGTGA 918 | ||| | ||| ||| || || ||||| |||||| |||| || | | || | ||| |||| Sbjct 725 G-CGTTCAGGGAACA-ATCGGGTACCTCGATCCAGTATA-TTATACCACGAAAATGGTGA 781 Query 919 CAGAATATACGGATGTGTACAGCTTTGGAGTCTTTTTGATGGTTGTTATCACTGGTATAT 978 | |||||||| |||||||||||||||||||||||||||||||||||| |||||| || | Sbjct 782 CTGAATATACCGATGTGTACAGCTTTGGAGTCTTTTTGATGGTTGTTCTCACTGCTAGAC 841 Query 979 CGGTT-TA-CTTC-ACCGGATCTGATGGGTA-TCCTGTAGGTATT-CTTGGATATATGAA 1033 | | | | | || || | ||||||||| | | | | |||| || || ||| |||| Sbjct 842 CAGCTCTCGCATCCACTAGCTCTGATGGGGACTACAA-ACATATTGCT-GGCTATGTGAA 899 Query 1034 AGGCTTAGC-TGAGAATGGGAAGCTCAATGAAATAGTATATCCTATGATAATGAAAGAGA 1092 |||||| | |||||||||| ||||| ||| |||| || || | | | | ||| |||| | Sbjct 900 AGGCTTT-CATGAGAATGGGCAGCTCGATGGAATAATAGATTCAAAGGTGATGGAAGACA 958 Query 1093 TGACAAGTGCTCAAAGATTGCAGGTGGAAGCATGCGTTTTACTT-GCACTGAGATGCTGC 1151 | ||||||||||||| | ||| |||||||| || || | || | |||||||| || Sbjct 959 TTACAAGTGCTCAAAAAGTGCTTGTGGAAGCGTGTGTGGTG-TTAGGGCTGAGATGTTGT 1017 Query 1152 GAG--GAGAGGGTAGAAGACAGACCGAAGATGATTCAGGTAGCTAAAGAACTCAAGCGGA 1209 ||| ||||| | ||| |||||||||||||||| || |||||||||||||||||| || Sbjct 1018 GAGCTGAGAGA-T-GAAAACAGACCGAAGATGATCCAAATAGCTAAAGAACTCAAGCAGA 1075 Query 1210 TTGAA-CATCATGTTTTGAGATCCTAGC 1236 |||| ||| || ||| ||||||||||| Sbjct 1076 TTGAGGCATTAT-TTTGGAGATCCTAGC 1102 > Ahg938755 jgi|Araly1|938755|scaffold_502946.1 Length=1105 Score = 745 bits (403), Expect = 0.0 Identities = 864/1079 (80%), Gaps = 61/1079 (6%) Strand=Plus/Plus Query 197 AAATCTGAGAACTGGGTCCT-Ggaaaaagaaggaaaaaagcatgaagaaggaa-agATGG 254 ||||||| | |||||| || ||| || ||||| ||||| | ||| | ||| || ||| Sbjct 42 AAATCTG-GGTCTGGGT-CTCGGACAAGGAAGG--AAAAGGA-CAAG-ACGAAGAGGTGG 95 Query 255 TTCTTAGAGAATGGAAGTATCTTCTTAAAAGAGCTCATCGTTGATTGTAATGGTAAATCC 314 ||||| || || ||||| |||||||||| ||| || ||| ||||||||| ||||||||| Sbjct 96 TTCTTGGATAACGGAAGCATCTTCTTAACAGAACTTGTCGCTGATTGTAACGGTAAATCC 155 Query 315 ATTCCTATACGTAGCTTTACTTCTTCCCAGAT-TCGTAAAGCCACCAAGAATTTCGATT- 372 |||||||| || || ||| || || ||||| | | ||||| ||||| |||||||||| Sbjct 156 ATTCCTATTCGCAGTTTTTCTCCTGAGCAGATATTG-AAAGCTACCAACAATTTCGATTC 214 Query 373 TAAGCTGTTTTGTAGCT-G-AAGAAGGGTTCTACATA-TGGTACAAAGGTGTAATCGAAG 429 | || |||||||| || | |||| | | ||| | | ||||| | |||| |||||||| Sbjct 215 T-AGTTGTTTTGT--CTCGCAAGATGTATACTATA-AGTGGTATAGAGGTCAAATCGAAG 270 Query 430 ATAGATCTTACATGATCAAGAGATTCTCTGAGTAT-AAAGTCACTG-ATTAC-A----GA 482 |||||||||||||||||||||||||||| ||| || ||| | || | | || | || Sbjct 271 ATAGATCTTACATGATCAAGAGATTCTCCGAGGATGAAATT-ACAGGAAAACGACATAGA 329 Query 483 GT-AAGTGAGGTTTATAAAGACATTGTCTTGTCTGCTCGTATGAGCAACCACAACAACTT 541 || || |||||||| || |||||||||||||||||||| ||||| || |||| |||||| Sbjct 330 GTTAAA-GAGGTTTACAACGACATTGTCTTGTCTGCTCGGATGAGTAATCACAGCAACTT 388 Query 542 TCTTAAACTACTAGGATGTTGTCTTGAGTTCCCTTTTCCTGTTCTTGTGTTTGAATTTGC 601 ||| |||||| ||||||||||||| ||||| |||||||| ||||||||||||||||| || Sbjct 389 TCTGAAACTATTAGGATGTTGTCTCGAGTTTCCTTTTCCGGTTCTTGTGTTTGAATTCGC 448 Query 602 TGAGCATGGAGTTTTGAATTACCGAGGAGGTATTACGGTTAACGGTGAAGAGTCTTTATT 661 || |||||| ||||||| | || |||||||||| |||||| |||||||| | | |||| Sbjct 449 AGAATATGGAGCTTTGAATCAGCGTGGAGGTATTATGGTTAATGGTGAAGAATATATATT 508 Query 662 GCCTTTGAGTTTGA-GGTTGAAGATTGGGAAGGAGATTGCAAATGCCT-TG-GCTTATCT 718 ||| | |||| | | |||||||||||||||| |||||||||||||| | || | |||||| Sbjct 509 GCCGTGGAGTGT-ACGGTTGAAGATTGGGAAAGAGATTGCAAATGC-TGTGAG-TTATCT 565 Query 719 TCACATGGCGTTTCCTAAGATCATCATATATAGAGATGTGAAGCCACTGCATGTTTTCTT 778 ||||||||| || ||||||||||||||| |||||||||| || ||| |||| |||||||| Sbjct 566 TCACATGGCATTCCCTAAGATCATCATACATAGAGATGTTAAACCAATGCACGTTTTCTT 625 Query 779 GGACAATAATTGGACTGCAAAGTTGTCTGATTTATCTTTCTCAATATCGCTGGAAGAGGG 838 |||||| || ||||| |||||||||||||||||||| ||||||||||| || || || Sbjct 626 GGACAAGAACTGGACCGCAAAGTTGTCTGATTTATCCTTCTCAATATCTCTCCCTGAAGG 685 Query 839 AAAATCACAGA-TAGAAGCGGAA-GACGTGCTGGGTACATATGGTTACCTTGATCCATTA 896 ||||||| ||| ||||||| ||| | || || || |||| ||| ||||| ||||||||| Sbjct 686 AAAATCA-AGAATAGAAGCTGAATGG-GTTCTTGGAACATTTGGGTACCTCGATCCATTA 743 Query 897 TA-CTTT-GCAACTAGAATTGTGACAGAATATACGGATGTGTACAGCTTTGGAGTCT-TT 953 || | | | | | || ||||||| |||||||| ||||| |||||||||||| ||| || Sbjct 744 TATCATAAG-A-CGAGTTTTGTGACTGAATATACCGATGTCTACAGCTTTGGAATCTGTT 801 Query 954 TTGATGGTTGTTATCACTGGTATATCGGTT-TACTTCACCGGATCTGATGG-GTATCCTG 1011 || ||||| || | ||||||| | ||| | | | |||| |||||||| | ||| | Sbjct 802 TTC-TGGTTATTCTTACTGGTAAACCGGCTAT-CATCACTATTTCTGATGGAG-ATC-TC 857 Query 1012 TA-GGTATTCTTGGATATATGAAAGGCTTA-GCTGAGAATGGGAAGCTCAATGAAATAGT 1069 | ||||||||| | ||| ||| ||| ||| | |||||||||||||||| ||||| || | Sbjct 858 CAAGGTATTCTTAGCTATGTGAGAGGGTTATG-TGAGAATGGGAAGCTCGATGAAGTAAT 916 Query 1070 ATATCCTATGATAATGAAAGAGATGACAAGTGCTCAAAGATTGCAGGTGGAAGCATGCGT 1129 | |||| ||| | |||||||| || ||||||| |||||| ||||| |||||||| || || Sbjct 917 AGATCCAATGTTGATGAAAGATATCACAAGTGGTCAAAGGTTGCAAGTGGAAGCTTGTGT 976 Query 1130 TTTA-CTTGCACTGAGATGCTGCGAGGAGAGGG-TAGAAGACAGACCGAAGATGATTCAG 1187 | ||||| |||||||||| ||||| || | | ||||||||||| |||||||| || Sbjct 977 GG-AGCTTGCTTTGAGATGCTGTGAGGAAAGAGAT-GAAGACAGACCAAAGATGATCCAA 1034 Query 1188 GTAGCTAAAGAACTCAAGCGGATTGAA-CATCA-TGTTTTGAGATCCTAGCTAGAGATC 1244 ||||||||||||||||||||||||||| ||||| || || || ||||||||||||| Sbjct 1035 GTAGCTAAAGAACTCAAGCGGATTGAAGCATCACTGA---GAAATTCTAGCTAGAGATC 1090 > Ahg898723 jgi|Araly1|898723|Al_scaffold_0005_2689 Length=348 Score = 84.2 bits (45), Expect = 3e-15 Identities = 210/286 (73%), Gaps = 26/286 (9%) Strand=Plus/Plus Query 252 TGGTTCTTAGAGAATGGAAG--TATCTTCTTAAAAGAGCTCATCGTT-GATTGTAATGGT 308 ||||||||||| || ||||| || ||| | ||||||||||| ||| || || || ||| Sbjct 43 TGGTTCTTAGACAACGGAAGCACAT-TTC-TCAAAGAGCTCATTGTTGGA-TGCAACGGT 99 Query 309 AAATCCATTCCTATACGTAGCTTTACTTCTTCCCAGATTCGT-AAAGCCACCAA-GAATT 366 ||| | | |||||| | |||||| | ||| ||||| || | || ||||| || | || Sbjct 100 AAAACAAATCCTATCCAAAGCTTTTCCTCTGACCAGA-TCCTCAAGGCCACAAATGGCTT 158 Query 367 TCGATTTAAGCTGTTTTGT-AGCTGAAG-AAGGGTT-CTACATATGGTACAAAGGT-GTA 422 | ||| |||| | | ||| | | | || | || ||||| |||| || |||| | Sbjct 159 T-GATCCAAGCCGCTATGTCA-C-G-AGTGACCTTTACTACACCTGGTTCACAGGTAG-C 213 Query 423 ATCGAAGATAGATCTTACATGATCAAGA-GATTCTCTGAGTATAAAGTCACTG-AT-TAC 479 |||||||||||||||||||||||||||| | ||| ||||| | ||||||| | | | Sbjct 214 ATCGAAGATAGATCTTACATGATCAAGATGTTTC-CTGAGGAGAAAGTCAGAGGAGATGG 272 Query 480 AGA-GTAAGTG-AG--GTTTATAAAGACATTGTCTTGTCTGCTCGT 521 ||| | || || || ||||| || ||||||||| | ||||||||| Sbjct 273 AGATGGAATTGGAGCTGTTTACAACGACATTGTCATATCTGCTCGT 318 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59915955385 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5