BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G57890.2
Length=2210
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486241 jgi|Araly1|486241|fgenesh2_kg.5__2233__AT3G57890.1 2263 0.0
Ahg483312 jgi|Araly1|483312|fgenesh2_kg.4__2372__AT2G42230.1 1068 0.0
> Ahg486241 jgi|Araly1|486241|fgenesh2_kg.5__2233__AT3G57890.1
Length=2116
Score = 2263 bits (1225), Expect = 0.0
Identities = 1349/1408 (96%), Gaps = 11/1408 (1%)
Strand=Plus/Plus
Query 802 GCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCACAGGCAGATGATGAAGCTCATCA 861
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 569 GCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCACAAGCAGATGATGAAGCTCATCA 628
Query 862 GTTGTCATATCTGCAAAAACATTTAGCAAACATCATTTCTCTCCTTGCAGAGCCTGTGGA 921
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 629 ATTGTCATATTTGCAAAAACATTTAGCAAACATCATTTCTCTCCTTGCAGAGCCTGTGGA 688
Query 922 GGGAGAAGGAGATGAATCATTGGTTTTCTCTATGGAGGCGTTCGAGCATCTGCGTTTTCT 981
||||||||||||||||||||||||| |||| |||||||| |||||||| ||| |||||||
Sbjct 689 GGGAGAAGGAGATGAATCATTGGTTCTCTCCATGGAGGCTTTCGAGCACCTGGGTTTTCT 748
Query 982 TGTTCAGTTTGGTGATAAGGGATCTGATGTATCTCCATTGAGCCAAGCTACTCCtttttt 1041
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 749 TGTTCAGTTTGGTGATAAGGGATCTGATGTATCTCCATTGAGCCAAGCTACTCCATTTTT 808
Query 1042 tGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCCCCGCTTCCCAAGTGCATGACTG 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 TGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCCCCGCTTCCCAAGTGCATGACTG 868
Query 1102 GCTTCTGCAAAACATAGCTTCCGCTTTAGAAAGCATTACTGAGAGAATTTCTGGAAAAGA 1161
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 GCTTATGCAAAACATAGCTTCCGCTTTAGAAAGCATTACTGAGAGAATTTCTGGAAAAGA 928
Query 1162 GAACGGACCTTCTAACGATCAAGATGATGCGATGTCAGATGTTTGTGCTGCTCCGAACAA 1221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 929 GAACGGACCTTCTAACGATCAAGATGATGCGATGTCAGATGTTTGTGCTGCTCCGAACAA 988
Query 1222 GGTTGCACCTAGTACTAGAGGCCCGTGTTTAATCGAGGGAGTCTCCAAGACTTCACTTGT 1281
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 989 GGTTGCACCTAGTACTAGAGGTCCGTGTTTAATCGAGGGAGTCTCCAAGACTTCACTTGT 1048
Query 1282 TAAGCAAGCCTCCGATCTAAGGGGTAGATCTGTGAAGGTTGTCAATTGCCATGATTCTGT 1341
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1049 TAAGCAGGCCTCCGATCTAAGGGGTAGATCTGTGAAGGTTGTCAATTGCCATGATTCTGT 1108
Query 1342 AATTTATCTTTTAGCACCATTGCGATATGCAACTGTGCACGGATGTTCTGATACTACTAT 1401
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1109 AATTTATCTTTTAGCACCATTGCGATATGCAACTGTTCATGGATGTTCTGATACTACTAT 1168
Query 1402 AGTTTTGGGAGCTGTTGGCAAGGCAATAAAAGTTGAGCACTGTGAAAGAGTTCATGTGAT 1461
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1169 AGTTTTGGGAGCTGTTGGCAAGGCATTAAAAGTTGAGCACTGTGAGAGAGTTCATGTGAT 1228
Query 1462 TGTAGCTGCCAAACGAGTGTGCATTGCCAATTGTCGTGAATGTGTATTCTTCTTGGGAGT 1521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1229 TGTAGCTGCCAAACGAGTGTGCATTGCCAATTGTCGTGAATGTGTATTCTTCTTGGGAGT 1288
Query 1522 CAATCAGCGGCCACTTATTGTTGGTGATAACCACAAACTGCAGGTCGCTCCATATAATAC 1581
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1289 CAATCAGCGACCACTTATTGTTGGTGATAACCACAAACTGCAGGTCGCTCCATATAATAC 1348
Query 1582 ATTTTACTCTCATTTGGAAGAGCACATGAGGGAGGTAGGGCTTGAGCCAACGATCAACAA 1641
|||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||
Sbjct 1349 ATTTTACTCTCATTTGGAAGAGCACATGAGTGAGGTTGGGGTTGAGCCAACAATCAACAA 1408
Query 1642 ATGGGACAAACCATTGGCCCTGGGAGCTGTGGATCCACATGACTCCCTGTCACATCCTGC 1701
|||||||||||||||||| |||||||| || |||||||||||||| |||||||| |||||
Sbjct 1409 ATGGGACAAACCATTGGCTCTGGGAGCAGTAGATCCACATGACTCACTGTCACACCCTGC 1468
Query 1702 CGGTGTTGCTGATGCACAGGCTGAATCAGCTGCTTCTGTAGACCCTGACCAGTTCGTAAA 1761
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 1469 CGGTGTTGCTGATGCACAAGCTGAATCAGCTGCTTCTGTAGACCCTGACCAGTTCGTTAA 1528
Query 1762 CTTTTTGATCCCAAACTGGTTTAGCGGCGCGGAG-CTTGGTTCGACGAAAGACAATCCAT 1820
||||||||||||||||||||||||||||| |||| || |||||||| |||||||||||||
Sbjct 1529 CTTTTTGATCCCAAACTGGTTTAGCGGCGAGGAGACT-GGTTCGACAAAAGACAATCCAT 1587
Query 1821 TTCCATTGCCAGATGCTTATATGGCAGCTCAGCAGAGAAACCTTAAGAACTTTGAAGAAA 1880
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 TTCCATTGCCAGATACTTATATGGCAGCTCAGCAGAGAAACCTTAAGAACTTTGAAGAAA 1647
Query 1881 CAAGACGATCGTTAAAAGAGGCGCCTCTAGAAGAAAACCGGAAACGAGAGCTATCAAGTG 1940
||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct 1648 CAAGACGATCGTTAAAAGAAGCGCCTTTGGAAGAAAACCGGAAACGAGAGCTATCAAGTG 1707
Query 1941 CACTCCATGTTTATTTCAAAGACTGGCTTTACGCATCTGGAAATATAAGGCAACTCTACT 2000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1708 CACTCCATGTTTATTTCAAAGACTGGCTTTACGCATCTGGAAATATAAGGCAACTCTACT 1767
Query 2001 GCCTACAAGGTGACTAATAAGAATAATAGACCAAGCGGAAAGTGTCTTGTTCATGTAGAG 2060
||||||||||||||||| ||||| ||||||||||||||||| ||||| |||| |||||||
Sbjct 1768 GCCTACAAGGTGACTAAAAAGAAAAATAGACCAAGCGGAAAATGTCTCGTTCCTGTAGAG 1827
Query 2061 CTCC-TTCGATCATATTTGGCATATTGCTAGTGAAGAAACCC-CACC--CCAAGACCaaa 2116
|||| || |||||||||||||||||||||| ||||||||||| || |||| | |||
Sbjct 1828 CTCCCTT-GATCATATTTGGCATATTGCTACTGAAGAAACCCTCAAAGACCAAAAAAAAA 1886
Query 2117 agaaaaaagaaaaaa-g-agaaaTCAGCCTGATTCAGTGATTTGTAGTTTGGAACCAATA 2174
|||| || ||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1887 AGAAGAA-GAAAAAAAGGAGAAATCAGCCTGATTCAGTGATTTGTAGTTTGGAACCAATA 1945
Query 2175 CTTCACAACGTAACTTATCTGCACAGAA 2202
| ||| |||||||||||||||||||||
Sbjct 1946 CG-CACCACGTAACTTATCTGCACAGAA 1972
Score = 941 bits (509), Expect = 0.0
Identities = 554/575 (96%), Gaps = 6/575 (1%)
Strand=Plus/Plus
Query 120 GCAACTTCACCACCGGACCAGtctctctctatctcttctgtctctctACCTCGCGCGACG 179
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct 1 GCAACTTCACCACCGGACCAGTCTCTCTCTATCTCTTCTGTCTCTCGACCTCGCGCCACG 60
Query 180 AATCAATCATGACTGAAGAACAAGACCTCATCGACCAATCACCACCACCTTCAGCACCCG 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 61 AATCAATCATGACTGAAGAACAAGACCTCATCGACCAATCACCACCGCCTTCAGCACCCG 120
Query 240 ACCCTGAACCAAACTCGAGCACGAATCCGAATTCAGTAATCCATCCAAGGCGTGTGTCTT 299
||||||||||||| | | ||||||||||||||||||||||||| |||||||| ||||
Sbjct 121 ACCCTGAACCAAA--C---C-CGAATCCGAATTCAGTAATCCATCCGAGGCGTGTCTCTT 174
Query 300 TCGAGCACGGACTCCTCCCGATCCAGAAACTCGTTTTCACCGACCCGATCCAAACCTTAG 359
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 175 TCGAGCACGGACTCCTCCCGATCCAGAAGCTCGTTTTTACCGACCCGATCCAAACCTTAG 234
Query 360 CCCCTGTCAAGCAGAAGCTAGCCGATGCGGCTTCGAATAACCGCGTTGGATCGGCTGCAA 419
| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 235 CACCTGTCAAGCAGAAGCTAGCCGATGCCGCTTCTAATAACCGCGTTGGATCGGCTGCAA 294
Query 420 TCGCCGACGTTCTCCAGATCTCCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 295 TCGCCGACGTTCTCCAGATCTCCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTT 354
Query 480 CGGTGCTTCATTCCGAGTCTGACCCTCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCCG 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 355 CGGTGCTTCATTCCGAGTCTGACCCTCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCTG 414
Query 540 TCGGAGCTGATTTGCGGGATCTTATTTTGTTCCTGTACATTCAATCGTATAAGAAGTTGC 599
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 415 TCGGAGCTGATTTGCGGGATCTAATTTTGTTCCTCTACATTCAATCGTATAAGAAGTTGC 474
Query 600 TTCCTAGGACGCATAAGGACTCCGCAGCGGTGGCTGATGTTTGGCCATCGACTTCAGCTT 659
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 475 TTCCTAGGACGCATAAGGACTCCGCAGCGGTGGCTGATGTATGGCCGTCGACTTCAGCTT 534
Query 660 TTGATGGATACTTGTCTGCGTTATCGCCAATTCAG 694
|||||||||||||||||||||||||||||||||||
Sbjct 535 TTGATGGATACTTGTCTGCGTTATCGCCAATTCAG 569
> Ahg483312 jgi|Araly1|483312|fgenesh2_kg.4__2372__AT2G42230.1
Length=2135
Score = 1068 bits (578), Expect = 0.0
Identities = 996/1195 (83%), Gaps = 40/1195 (3%)
Strand=Plus/Plus
Query 802 GCTTGTTCGCAGCAACAGCCGTCGATTTATGCCATCACAGGCAGATGATGAAGCTCATCA 861
||||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||
Sbjct 551 GCTTGTTCGTAGCAACAGCCGTCGGTTTATGCCATCACCTACAGATGAAGAAGCTCATCA 610
Query 862 GTTGTCATATCTGCAAAAACATTTAGCAAACATCATTTCTCTCCTTGCAGAGCCTGTGGA 921
|| || ||||||||||| || ||||||| || || |||||||||||||||||| |||
Sbjct 611 ATTATCGTATCTGCAAAAGCACATAGCAAATATTGTTGCTCTCCTTGCAGAGCCTGGGGA 670
Query 922 GGGAGAAGGAGATGAATCATTGGTTTTCTCTATGGAGGCG-TTCGAGCAT-CTGCGTTTT 979
|||||||||||||||||| ||||| | |||||||| | | || |||||| || | |||
Sbjct 671 GGGAGAAGGAGATGAATCTTTGGTCCTGTCTATGGA-GAGTTTGGAGCATATTG-GGTTT 728
Query 980 CTTGTTCAGTT-TGGTGATAAGGGATCTGATGTATCTCCATTGAGCCAAGCTACTCCttt 1038
|||||||| || |||||||||||||| ||||||| || | || |||||||||| ||||||
Sbjct 729 CTTGTTCA-TTATGGTGATAAGGGATTTGATGTACCTTCTTTAAGCCAAGCTAGTCCTTT 787
Query 1039 ttttGCAAATTCTGATCCGGATATGCCCGCTGTTCCAGTCCCCGCTTCCCAAGTGCATGA 1098
|||||||||||||||||| ||||||||||||| || || || |||||||||||| ||||
Sbjct 788 TTTTGCAAATTCTGATCCCAATATGCCCGCTGTCCCCGTTCCTGCTTCCCAAGTGAATGA 847
Query 1099 CTGGCTTCTGCAAA-ACATAGCTTCCGCTTTAGAAAGCATTACTGAGAGAATTTCTGGAA 1157
|||||||| |||| |||||||||| || ||||||||||| |||| |||||||||||||
Sbjct 848 TTGGCTTCT-CAAAGACATAGCTTCTGCCATAGAAAGCATTTCTGACAGAATTTCTGGAA 906
Query 1158 AAGAGAACGGACCTTCTAA-----C-GATCAAGATGATGCGATGTCAGA-TGTTTGTGCT 1210
|||| || || | ||||| | |||||||||| ||| ||| || | | ||| ||
Sbjct 907 AAGAAAATGGGGCATCTAATGCCTCTGATCAAGATGCTGCAATGGCAAATTCTTT-TGGA 965
Query 1211 GCTCCGAACAAGGTTGCACCTAGT-ACTAGAGGCCCGTGT-TTAATCGAGGGAGTCTCCA 1268
|||| || || ||| || ||| | || ||||| |||||| || || ||||||||||| |
Sbjct 966 GCTCTTAATAAAGTTTCATCTAATGAC-AGAGGTCCGTGTATT-ATTGAGGGAGTCTCTA 1023
Query 1269 AGACTTCACTTGTT-AAGCAAGCCTCCGATC-TAAGGGGTAGATCTGTGAAGGTTGTCAA 1326
|||| |||||| || ||||| || || |||| ||| ||||||||| |||||||||| |||
Sbjct 1024 AGACCTCACTT-TTCAAGCAGGCTTCTGATCTTAA-GGGTAGATCAGTGAAGGTTGCCAA 1081
Query 1327 TTGCCATGATTCTGTAATTTATCTTTTAGCACCATTGCGATATGCAACTGTGCACGGATG 1386
||||||||||||||| |||||||| |||||||||||| |||||||||||||| | |||||
Sbjct 1082 TTGCCATGATTCTGTTATTTATCTGTTAGCACCATTGAGATATGCAACTGTGTATGGATG 1141
Query 1387 TTCTGATACTACTAT-AGTTTTGGGAGCTGTTGGCAAGGCAATAAAAGTTGAGCACTGTG 1445
||||||| ||||||| | || |||||||| |||||||||| ||| ||||||||| ||||
Sbjct 1142 TTCTGATTCTACTATCA-TTCTGGGAGCTACTGGCAAGGCAGTAAGAGTTGAGCATTGTG 1200
Query 1446 AAAGAGTTCATGTGATTGTAGCTGCCAAACGAGTGTGCATTGCCAATTGTCGTGAATGTG 1505
| ||||||||||||||||||||| |||||||| | ||||| |||||||| ||||||||||
Sbjct 1201 AGAGAGTTCATGTGATTGTAGCTACCAAACGAATCTGCATCGCCAATTGCCGTGAATGTG 1260
Query 1506 TATTCTTCTTGGGAGTCAATCAGCGGCCACTTATTGTTGGTGATAACCACAAACTGCAGG 1565
| || || ||||||||||||||||| || |||||||||||||| ||||||||||| ||||
Sbjct 1261 TGTTATTTTTGGGAGTCAATCAGCGACCTCTTATTGTTGGTGACAACCACAAACTACAGG 1320
Query 1566 TCGCTCCATATAATACATTTTACTCTCATTTGGAAGAGCACATGAGGGAGGTAGGGCTTG 1625
| ||||||||||||||||||||||| || ||||| |||||||| | |||||||| ||
Sbjct 1321 TTGCTCCATATAATACATTTTACTCACACTTGGAGGAGCACATAACCGAGGTAGGAATTC 1380
Query 1626 AGCCAACGATCAACAAATGGGA-CAAACCATTGGCCCTGGGAGCTGTGGATCCACATGAC 1684
||||||| |||||||||||| | || || ||||| |||||||| || ||||| ||||||
Sbjct 1381 AGCCAACTATCAACAAATGGAATGAATCC-TTGGCACTGGGAGCAGTTGATCCGCATGAC 1439
Query 1685 TCCCTGTCACATCCTG-CCGGTG-TTGCTGATGCACAGGCTGAATCAGCTGCTTCTGTAG 1742
|| || |||||||| | | |||| | ||||| ||| ||||| | ||| ||| ||| |
Sbjct 1440 TCACTATCACATCC-GACTGGTGCCT-CTGATAAACAATCTGAACCGGCTTCTTGTGTGG 1497
Query 1743 ACCCTGACCAGTTC-GTAAACTTTTTGATCCCAAACTGGTTT-AGCGGCGCGGAGCTTGG 1800
|||||||||||||| | | ||||||||| |||||||||||| || |||| | ||||||
Sbjct 1498 ACCCTGACCAGTTCACT-ACCTTTTTGATTCCAAACTGGTTTGAG-GGCGAAGCGCTTGG 1555
Query 1801 TTCGACGAAAGACAATCCATTTCCATTGCCAGATGCTTATATGGCAGCT-CAGCAGAGAA 1859
||| |||||||||||||||||||||||||||||||| |||| ||||| | ||||||| ||
Sbjct 1556 TTCCACGAAAGACAATCCATTTCCATTGCCAGATGCATATAAGGCAG-TGCAGCAGACAA 1614
Query 1860 ACCTTAAGAACTTTGAAGAAACAAGACGATCGTTAAAAGAGGCGCCTCTAGAAGAAAACC 1919
||||||||||||| ||||||||||||| ||| |||| ||| | |||| ||||||||||
Sbjct 1615 ACCTTAAGAACTTAGAAGAAACAAGACAATCATTAAGAGAATCATCTCTTGAAGAAAACC 1674
Query 1920 GGAAACGAGAGCT-ATCAAGTGCACTCCATGTTTATTTCAAAGACTGGCTTTACG 1973
| |||||||| || | | | || |||| | |||||||||||||||| ||||
Sbjct 1675 GAAAACGAGAACTTA-CTACAGCGTTCCACATGCATTTCAAAGACTGGCTCTACG 1728
Score = 440 bits (238), Expect = 2e-122
Identities = 372/436 (85%), Gaps = 12/436 (3%)
Strand=Plus/Plus
Query 265 TCCGAATTCAGTAATCCATCCAAGGCGTGTGT-CTTTCGAGCACGGACTCCTCCCGATCC 323
|||||||| ||||||||| || || ||||| | ||||||||||||| || || |||||||
Sbjct 122 TCCGAATTTAGTAATCCACCCGAGACGTGT-TCCTTTCGAGCACGGCCTTCTTCCGATCC 180
Query 324 AGAAACTCGTTTTCACCGACCCGATCCAAACCT-TAGCCCCTG-TCAAGCAGAAGCTAGC 381
|||| || ||||| ||||||||||| |||| || |||| || | ||||||| ||||||||
Sbjct 181 AGAAGCTTGTTTTTACCGACCCGATTCAAA-CTCTAGCTCC-GATCAAGCAAAAGCTAGC 238
Query 382 CGATGCGGCTTCGAATAACCGCGTTGGATCGGCTGCAATCGCCGACGTTCTC-CAGATCT 440
| | | || ||||||||||||| ||||| ||||| || |||| | ||| | |||||
Sbjct 239 TGCTTCCGCAACGAATAACCGCGTCGGATCTGCTGCCATTTCCGATGCACTCTC-GATCT 297
Query 441 CCGGCGACCATGCGCGTCTCGTTCTCGAGACTCTCGGTTCGGTGCTTCATTCCGAGTCTG 500
|| ||||||||||| |||||||| || ||||||||||||||||| |||| |||| |||
Sbjct 298 CCAATGACCATGCGCGGCTCGTTCTTGAAACTCTCGGTTCGGTGCTCCATTGCGAGACTG 357
Query 501 ACCC-TCTGGTTCGGGCGAAACCTGAGGAAGTTGATTCCGTCGGAGCTGATTTGCGGGAT 559
|||| | ||||| ||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 358 ACCCAT-TGGTTTTGGCCAAACCTGAGGAAGTTGATTCCGTCGGAGCTGATTTGAGGGAT 416
Query 560 CTTATTTTGTTCCTGTACATTCAATCGTATAAGAAGTTGCTT-CCTAGGACGCATAAGGA 618
|| || ||||| || |||||||||||||||||||||||| || |||||||||||||||||
Sbjct 417 CTGATATTGTTTCTCTACATTCAATCGTATAAGAAGTTG-TTGCCTAGGACGCATAAGGA 475
Query 619 CTCCGCAGCGGTGGCTGATGTTTGGCCATCGACTTCAGCTTTTGATGGATACTTGTCTGC 678
||| || | |||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 476 CTCTGCTTCTGTGGCTGATGTTTGGCCATCGACTTCTGCTTTTGATGGATACTTGTCAGC 535
Query 679 GTTATCGCCAATTCAG 694
||||| |||||||||
Sbjct 536 ATTATCTCCAATTCAG 551
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83189095080
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5