BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G57940.1
Length=3476
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486246 jgi|Araly1|486246|fgenesh2_kg.5__2238__AT3G57940.1 5448 0.0
Ahg312088 jgi|Araly1|312088|fgenesh1_pm.C_scaffold_1000868 1598 0.0
Ahg939010 jgi|Araly1|939010|scaffold_503201.1 593 2e-168
> Ahg486246 jgi|Araly1|486246|fgenesh2_kg.5__2238__AT3G57940.1
Length=3318
Score = 5448 bits (2950), Expect = 0.0
Identities = 3185/3297 (97%), Gaps = 22/3297 (1%)
Strand=Plus/Plus
Query 97 TGTTGTTCTTAAAATTCAGTTCCAAACGGAAATTGATTTCTTCGTCAGTTGCG-TTTTTT 155
|||||||| |||||||||||| ||||| ||||||||||| | |||||||| |||||
Sbjct 35 TGTTGTTCATAAAATTCAGTTTTAAACGAAAATTGATTTC--AG-CAGTTGCGATTTTTA 91
Query 156 ACCAACACTCGAAAGCAGAACCCATATTTTGTTATTGAATTTGGGtttttttttGTCTGT 215
| ||||| |||||||||||||||| |||||||||||||| ||||| |||||| |||
Sbjct 92 ATCAACATTCGAAAGCAGAACCCAGATTTTGTTATTGAA-TTGGG----TTTTTGAGTGT 146
Query 216 GTTAAGAAGATTAAGTAGGAGGAAGAAGAAGAGCTAGTTTTGCGAGAATGAGGAAGAAGG 275
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 147 GTTAAGAAGATTAAGGAGGAGGAAGAAGAAGAGCTAGTTTTGCAAGAATGAGGAAGAAGG 206
Query 276 TTGATGAACGTATCAGGACTCTGATTGAAAACGGTGTCAAATTGAGACACCGTTCCATGT 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207 TTGATGAACGTATCAGGACTCTGATTGAAAACGGTGTCAAATTGAGACACCGTTCCATGT 266
Query 336 TTGTAATCATTGGTGACAAGTCTCGTGACCAGATAGTGAACCTCCATCATATGTTGTCAA 395
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 267 TTGTAATCATTGGTGACAAGTCTCGTGACCAGATAGTGAACCTCCATCATATGTTGTCTA 326
Query 396 AGGCAGTTATTAAATGTAATCCGAGTGTGTTGTGGTGCTACAAGGATAAACTTGACATTA 455
||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||
Sbjct 327 AGGCAGTGATTAAGTGTAATCCCAGTGTCTTGTGGTGCTACAAGGACAAACTTGACATTA 386
Query 456 GCAGTCATAAGCAAAAGCGTTCGAAGCAGCTGAAGAGATTGAGGGAGAGAGGACAGTTAG 515
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 387 GCAGTCATAAGCAAAAGCGTTCGAAGCAGCTCAAGAGATTGAGGGAGAGAGGACAGTTGG 446
Query 516 ATCCAGAGAAACTTGACGCTTTCTCGCGTTTGCTTGATGTTGGAAGAGTCACTCATTGCT 575
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 447 ATCCAGAGAAACTTGACGCTTTCTCGCGTTTGCTTGATGTGGGAAGAGTAACTCATTGCT 506
Query 576 TGTACAAAGATTCTGAACGAATTCTTGGAAATACTTTTGGCATGTGCATCTTACAGGATT 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 507 TGTACAAAGATTCTGAACGAATTCTTGGAAATACTTTTGGCATGTGCATCTTACAGGATT 566
Query 636 TTGAAGCTTTAACTCCAAATCTACTAGCAAGAACAATAGAGACTGTGGAAGGTGGTGGTT 695
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 567 TTGAAGCTTTAACTCCAAATCTACTAGCAAGAACAATAGAGACTGTGGAAGGTGGTGGTT 626
Query 696 TGGTTGTATTGATATTGCGATCACTTACATCGCTTACTAGTCTATGCACTATGGTTATGG 755
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 627 TGGTTGTATTAATATTACGATCACTTACATCGCTTACTAGTCTATGCACTATGGTTATGG 686
Query 756 ATGTCCATGACAGATTCCGAACTGAATCGCATTCTGAGGCTGCCGGCCGTTTCAATGAAC 815
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 687 ATGTCCATGACAGATTCCGAACTGAATCGCATTCTGAGGCTGCTGGCCGTTTCAATGAGC 746
Query 816 GTTTTCTGCTTTCACTTGCATCTTGCAAAGCATGTGTTGTCATGGATGATGAGTTGAATA 875
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 747 GTTTTCTGCTATCACTTGCATCGTGCAAAGCATGTGTTGTCATGGATGATGAGTTGAATA 806
Query 876 TTTTGCCGCTTTCCTCGCATATCAGATCTATTACTCAAGTTCCAACAGAAAAGGATTCCG 935
| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 807 TATTGCCGCTTTCCTCGCATATCAAATCTATTACTCAAGTTCCAACAGAAAAGGATTCCG 866
Query 936 AGGGGCTCTCTGAGGCAGAGCGGGATCTGAAGAGTTTGAAAGAAGACCTAAGTGATGATT 995
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 867 AGGGGCTCTCTGAGGCAGAGCGGGATCTGAAGAGTTTGAAAGAAGAACTAAGTGATGATT 926
Query 996 TTCCTGTTGGTCCGTTAATCAAGAAATGTTGTACATTGGATCAGGGTAAAGCTGTAGTAA 1055
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 927 TTCCTGTTGGTCCGTTAATCAAGAAATGCTGTACATTGGATCAGGGTAAAGCTGTAGTCA 986
Query 1056 CATTTTTCGATGCAATTTTGGATAAGGCTCTCCGCAGCATAGTTGCTTTGATTGCAAGTC 1115
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 CATTTTTTGATGCAATTTTGGATAAGGCTCTCCGCAGCATAGTTGCTTTGATTGCAAGTC 1046
Query 1116 GAGGACGTGGAAAATCTGCTGCACTTGGTTTAGCTGTTGCCGGGGCTGTTGCTGCTGGGT 1175
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1047 GAGGGCGTGGAAAATCTGCTGCACTTGGTTTAGCTGTTGCCGGGGCTGTTGCTGCTGGGT 1106
Query 1176 ACTCAAATATTTACATAACTGCACCAAGCCCGGATAACTTGAAGACATTCTTTGAGTTTG 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 ACTCAAATATTTACATAACTGCACCAAGCCCGGATAACTTGAAGACATTCTTTGAGTTTG 1166
Query 1236 TTTGCAAAGGCTTTGATGCACTTGAATATAAGGAGCACCTTGATTATGATGTTGTGAAAA 1295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 TTTGCAAAGGCTTTGATGCACTTGAATATAAGGAGCACCTTGATTATGATGTTGTGAAAA 1226
Query 1296 GTGCAAATCCTGACTTCAAAAAAGCTGTTGTACGGATAAATATCTTCAAGCAGCATAGAC 1355
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1227 GTGCGAATCCTGACTTCAAAAAAGCTATTGTACGGATAAATATCTTCAAGCAGCATAGAC 1286
Query 1356 AAACTATCCAGTATATACAACCACACGAACATGAGAAGCTTTCACAAGTAGAGCTGTTGG 1415
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1287 AAACTATCCAGTATATACAACCACACGAGCATGAGAAGCTCTCACAAGTAGAGCTGTTGG 1346
Query 1416 TTATTGATGAAGCAGCAGCTATTCCTTTACCAGTTGTGAAGTCTTTGCTTGGTCCTTATC 1475
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1347 TTATTGATGAAGCGGCAGCTATTCCTTTGCCAGTTGTGAAGTCTTTGCTTGGTCCTTATC 1406
Query 1476 TAGTTTTCCTATCCTCAACTGTCAGTGGCTATGAAGGCACTGGGAGATCTTTGTCCCTGA 1535
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAGTTTTCCTATCGTCAACTGTCAGTGGCTATGAAGGCACTGGGAGATCTTTGTCCCTGA 1466
Query 1536 AACTCCTCCAACAATTAGATGAGCAAAGTCGGGCTCCTGCTACTGGTCTTGAAGG----C 1591
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1467 AACTCCTCCAACAATTAGATGAGCAAAGCCGGGCTCCTGCTACTGGTCTTGAAGGCTCTC 1526
Query 1592 --TCTGGTTGTCTTTTCAAGAAGATAGAACTTACTGAGTCTATTAGATACGGTTCTGGAG 1649
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1527 TTTCTGGTTGTCTTTTCAAGAAGATAGAACTTAATGAGTCTATTAGATACGGTTCTGGAG 1586
Query 1650 ATCCAATAGAATCCTGGCTTAATGGCCTACTTTGCCTTGATGTTGCTACTTGTCTGCCTA 1709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1587 ATCCAATAGAATCCTGGCTTAATGGCCTACTTTGCCTTGATGTTGCTACTTGTCTGCCTA 1646
Query 1710 ATCCTGCGTGCCATCCTTCGCCAAGTCAGTGTGATCTCTATTATGTCAACCGAGACACAC 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1647 ATCCTGCGTGCCATCCTTCGCCAAGTCAGTGTGATCTCTATTATGTCAACCGAGACACAC 1706
Query 1770 TCTTTTCTTATCACAAAGATAGTGAATTGTTTCTACAGAGAATGATGGCGCTATGTGTCT 1829
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1707 TTTTTTCTTATCACAAAGATAGTGAATTGTTTCTACAGAGAATGATGGCGCTATGTGTCT 1766
Query 1830 CGTCTCACTACAAGAATTCTCCTAATGATCTTCAACTGCTGGCTGATGCTCCTGCTCATC 1889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1767 CGTCTCACTACAAGAATTCTCCTAATGATCTTCAACTGCTGGCTGATGCTCCTGCTCATC 1826
Query 1890 ATTTGTTTGTGTTACTTGGTCCTGTTGATGAGTCCCAAAACAAGATTCCTGATATACTCT 1949
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1827 ATTTGTTTGTGTTACTTGGTCCTGTTGATGAGTCCCAAAACAAGCTTCCTGATATACTCT 1886
Query 1950 GTGTTATCCAGGTCTGTCTCGAAGGAAAGATATCTGAGAACTCTGCCCTTCAAAGTTTAA 2009
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1887 GTGTTATCCAGGTCTGTCTTGAAGGAAAGATATCTGAGAACTCAGCCCTTCAAAGTTTAA 1946
Query 2010 GGGATGGCCATTCACCATACGGAGACCAAATTCCATGGAAATTCTGTGAACAATTCCGGG 2069
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1947 GGGATGGCCATTCACCATATGGAGACCAAATTCCATGGAAATTCTGTGAACAATTCCGGG 2006
Query 2070 ACACTGAATTTCCAGGTTTCTCTGGTGCTCGGATAGTTCGCATAGCAGTCCACCCTAACG 2129
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2007 ACATTGAATTTCCAGGTTTCTCTGGTGCTCGGATAGTTCGCATAGCAGTCCACCCTAACG 2066
Query 2130 CCATGAAGATGGGATATGGTTCTGCTGCAGTTGAACTCTTGACCAGATATTTTGAGGGTC 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 CCATGAAGATGGGATATGGTTCTGCTGCAGTTGAACTCTTGACCAGATATTTTGAGGGTC 2126
Query 2190 AGATAGCTCCAATCTCAGAAGCTGAAGATAAAGTTGATGTGGAGCATGCACCCATTAAAG 2249
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2127 AGATAGCTCCAATCTCAGAAGCTGATGATAAAGTTGATGTGGAGCATGCACCCATTAAAG 2186
Query 2250 TGACTGAGGCTGCTGAGAAGGTCTCCATGCTCGAGGAGCAAGTAAAGCCTCGTACAAATC 2309
| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2187 TCACTGAGGCAGCTGAGAAGGTCTCCATGCTCGAGGAGCAAGTAAAGCCTCGCACAAATC 2246
Query 2310 TTCCACCTCTATTGGTTCCACTCCATGATCGACGACCTGAGAAGCTCCACTACATTGGTG 2369
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2247 TTCCACCTCTATTGGTTCCACTCCATGATAGACGACCTGAGAAGCTCCACTACATTGGTG 2306
Query 2370 TTTCCTTTGGGCTTACTTTGGACCTCTTCAGATTTTGGAGAAAACACAATTTTGCGCCAT 2429
||||||||||||||||||||||||||||| |||||||||| ||||| |||||||||||||
Sbjct 2307 TTTCCTTTGGGCTTACTTTGGACCTCTTCCGATTTTGGAGGAAACATAATTTTGCGCCAT 2366
Query 2430 TCTACGTTAGCCAAATCCCAAGTGCTGTGACTGGTGAGCACACATGTATGCTTTTAAAAC 2489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2367 TCTACGTTAGCCAAATCCCAAGTGCTGTGACTGGTGAGCACACATGTATGCTTTTAAAAC 2426
Query 2490 CCTTAAAGAATGATGAACTAGAAGTCAACGAGTCCGATGAGTTGGGATTCTTTACTCCCT 2549
||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 2427 CCTTAAAAAATGATGAACTAGAAGTCAACGAGTCCGATGAGCTGGGCTTCTTTACTCCCT 2486
Query 2550 TCTATAAAGATTTCAAGATAAGGTTCTCTAAGCTGTTGAGTGACAAATTCAAGAAGATGG 2609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2487 TCTATAAAGATTTCAAGATAAGGTTCTCTAAGCTGTTGAGTGACAAATTCAAGAAGATGG 2546
Query 2610 ACTATAAACTTGCAATGAGTGTCTTAAACCCCAAGATCAACTTCGCCGAGGTTGATTCTT 2669
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2547 ACTATAAACTTGCAATGAGTGTCTTAAACCCCAAGATCAACTTCCCCGAGGTTGATTCTT 2606
Query 2670 CAGGGAGTTCATCAGGTGGATTTTTGAAGACACTCAACGGCATATTATCTCCGTATGATA 2729
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 2607 CAGGGAGTTCATCAGGTGGATTTTTGAAGACACTCGACGGCATATTATCTCCATATGATA 2666
Query 2730 TGGAGAGGCTCAGAGCATATACTGAAAATCTGACTGACTTCAATCTGGTTTATGACATCT 2789
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2667 TGGAGAGGCTCAGAGCATATACTAAAAATCTGACTGACTTCAATCTGGTTTATGACATCT 2726
Query 2790 GCAAAACGCTGGCACATCAGTATTTTGAAGAGAAGCTCCCCGTATCACTGTCATATGTTC 2849
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2727 GCAAAACACTGGCACATCAGTATTTTGAAGAGAAGCTCCCCGTATCACTGTCATATGTTC 2786
Query 2850 AAGCATCTATATTGCTATGCTTGGGGTTGCAGGAGACGGATTTCTCCAGCATCGAGAGAC 2909
| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 2787 AGGCATCTATATTGCTATGCTTGGGGTTGCAGGAGACGGATATCTCTAGCATCGAGAGAC 2846
Query 2910 AAATGCAGTTGGAGAGGGGACAAATACATTCTCTTCTCCTGAAGGTCGCAAGGGAGTTAT 2969
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct 2847 AAATGCAGTTGGAGAGGGGACAAATACATTCTCTTATCCTGAAGGTCGCAAGGGAGTTGT 2906
Query 2970 ACAAATATCTCAATGGAGTTGCGGGAAAGGAAATCAAATCAGCTCTCCCTCGTTTGAAAG 3029
|||||||||||||||||||||| |||||||| ||| ||||||| ||||||||||||||||
Sbjct 2907 ACAAATATCTCAATGGAGTTGCAGGAAAGGAGATCGAATCAGCCCTCCCTCGTTTGAAAG 2966
Query 3030 AGAGAGAGCTT-ACCGCTCACAATGTATCAGTCGACGATGATATCAGGGAAGGAGCAAAA 3088
||||||||||| | | ||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 2967 AGAGAGAGCTTGAAC-CTCACAATGAATCGGTCGACGATGATATCAGGGAAGGAGCAAAA 3025
Query 3089 CAAGTCGAGGAACAAATGAA-GAAGGAGAAGATTGAAGGATTAATGGATTCTGAGCTTCA 3147
||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||
Sbjct 3026 CAAGTCGAGGAACAAAT-AATGAAGGAGAAGATTGGAGGATTAATGGATTCTGAGCTTCA 3084
Query 3148 ACAATATGTAATTGGGGATAAAGAAGCAGAGGCTCTGCAACATTCAAAGATCTCTTCAAG 3207
|||||||||||||||||| |||||| |||||||||||||||| ||||| |||||||||||
Sbjct 3085 ACAATATGTAATTGGGGACAAAGAATCAGAGGCTCTGCAACACTCAAAAATCTCTTCAAG 3144
Query 3208 TGGTATTATCAGTGTTAAGTCTACCAAATCAGAGAATGAGAACGGGTTTGACAAATCCAC 3267
||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||
Sbjct 3145 TGGTATTATCAGTGTTAAGTCCACCAAATCGGGGAATGAGAACGGGTTTGACAAATCCAC 3204
Query 3268 CAAAAAGAGAAGCAGTGATAAGCGTTCCTCTTCTTCCTCTAAATCCAAATCGTCCAAGAA 3327
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3205 CAAAAAGAGAAGCAGTGATAAGCGTTCCTCTTCTTCCTCTAAATCCAAATCTTCCAAGAA 3264
Query 3328 GAGAAAGAGCCTGAAGGAGTGAATTTTAACAAATGATCAAATCTGTTTTGAGCATGA 3384
||||| |||||||||||||| ||||||||||| |||||||||| ||||||||||||
Sbjct 3265 GAGAA-GAGCCTGAAGGAGT-AATTTTAACAA-TGATCAAATCAATTTTGAGCATGA 3318
Score = 63.9 bits (34), Expect = 8e-09
Identities = 34/34 (100%), Gaps = 0/34 (0%)
Strand=Plus/Plus
Query 17 CTTCGGTCCTAAACCCTACTCAACAATTTAGAAA 50
||||||||||||||||||||||||||||||||||
Sbjct 1 CTTCGGTCCTAAACCCTACTCAACAATTTAGAAA 34
> Ahg312088 jgi|Araly1|312088|fgenesh1_pm.C_scaffold_1000868
Length=3168
Score = 1598 bits (865), Expect = 0.0
Identities = 1550/1869 (83%), Gaps = 94/1869 (5%)
Strand=Plus/Plus
Query 1503 GCTATGAAGGCACTGGGAGATCTTTGTCCCTGAAACTCCTCCAACAATTAGATGAGCAAA 1562
|||||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1292 GCTATGAAGGTACTGGTAGATCTTTGTCCCTGAAACTCCTCCAACAGTTAGAAGAGCAAA 1351
Query 1563 GTCGGGCTCCTGCT-ACTGGTCTTGAAGG----C--TCTGGTTGTCTTTTCAAGAAGATA 1615
| || || |||| | |||||| ||||||| | |||||||| |||||||||||||||
Sbjct 1352 GCCGAGCCCCTG-TCACTGGTGTTGAAGGCTCTCTTTCTGGTTGCCTTTTCAAGAAGATA 1410
Query 1616 GAACTTACTGAGTCTATTAGATACGGTTCTGGAGATCCAATAGAATCCTGGCTTAATGGC 1675
||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct 1411 GAACTTAATGAGTCTATTAGATACGCTTCTGGAGATCCAATTGAATCCTGGCTTAATGGA 1470
Query 1676 CTACTTTGCCTTGATGTTGCTACTTGTCTGCCTAATCCTGCGTGCCATCCTTC-GCCAAG 1734
|||| |||||||||||||||| |||||| || |||||||| |||||||| || ||||||
Sbjct 1471 TTACTATGCCTTGATGTTGCTAATTGTCTTCCAAATCCTGCTTGCCATCC-TCTGCCAAG 1529
Query 1735 TCAGTGTGATCTCTATTATGTCAACCGAGACACAC-TCTTTTCTTATCACAAAG--A-T- 1789
|||||||||||| |||||||||||||||||||| | | |||||||||||||||| | |
Sbjct 1530 TCAGTGTGATCTTTATTATGTCAACCGAGACAC-CTTATTTTCTTATCACAAAGACAGTG 1588
Query 1790 A---G----T----G-AAT--T-G-T--TTCTAC-A--GA--GAATGATGGCGCTATGTG 1826
| | | | ||| | | | || ||| | | |||||||||| || ||||
Sbjct 1589 AGTTGTTTTTACAGGTAATAATAGTTGATTTTACAATCTACCGAATGATGGCACTTTGTG 1648
Query 1827 TCTCGTCTCACTACAAGAATTCTCCTAATGATCTTCAACTGCTGGCTGATGCTCCTGCTC 1886
|||| ||||||||||||||||||||||||||||||||||| ||| | ||||| |||||||
Sbjct 1649 TCTCTTCTCACTACAAGAATTCTCCTAATGATCTTCAACTTCTGTCGGATGCCCCTGCTC 1708
Query 1887 ATCATTTGTTTGTGTTACTTGGTCCTGTTGATGAGTCCCAAAACAAGATTCCTGATATAC 1946
|||||||||||||||| || |||||||||||||||||| ||||| || ||||||||||||
Sbjct 1709 ATCATTTGTTTGTGTTGCTCGGTCCTGTTGATGAGTCCAAAAACCAGCTTCCTGATATAC 1768
Query 1947 TCTGTGTTATCCAGGTCTGTCTCGAAGGAAAGATATCT-GAGAACTCTGCCCTTCAAAGT 2005
| ||||||||||||||||||||||||||| |||||||| | ||| || || |||||
Sbjct 1769 TGTGTGTTATCCAGGTCTGTCTCGAAGGACAGATATCTCG-GAAATCAGCTGAAAAAAGT 1827
Query 2006 TTAAGGGATGGCCATTCACCATACGGAGACCAAATTCCATGGAAATTCTGTGAACAATTC 2065
||||| || || ||||||||| | ||||| ||||| |||||||| ||||||||||| |||
Sbjct 1828 TTAAGAGAAGGTCATTCACCACATGGAGATCAAATACCATGGAAGTTCTGTGAACAGTTC 1887
Query 2066 CGGGACACTGAATTTCC-AGGTTTCTCTGGTGCTCGGATAGTTCGCATAGCAGTCCACCC 2124
|||||| || ||||| | | || ||||||||||| ||||| |||||||||||||||||
Sbjct 1888 CGGGACGTTGTCTTTCCAAAGCTT-TCTGGTGCTCGTATAGTACGCATAGCAGTCCACCC 1946
Query 2125 TAACGCCATGAAGATGGGATATGGTTCTGCTGCAGTTGAACTCTTGACCAGATATTTTGA 2184
|| || ||||||||||||||||| |||||||| |||||||| ||||||||||| |||||
Sbjct 1947 CAATGCTATGAAGATGGGATATGGGTCTGCTGCGGTTGAACTTTTGACCAGATACTTTGA 2006
Query 2185 GGGTCAGATAGCTCCAATCTCAGAAGCTGAAGATAAAGTTGATGTGGAGCATGCACCCA- 2243
||||||| ||||| | || ||||||| ||| ||| || | |||||||||| | || |||
Sbjct 2007 GGGTCAGCTAGCTTCTATATCAGAAGGTGATGATGAACTGGATGTGGAGCCTTCA-CCAG 2065
Query 2244 TTAAAGTGACTGAGGCTGCTGAGAAGGTCTCCATGCTCGAGGAGCAAG-TAAAGCCTCGT 2302
| | ||| ||||||||||| || ||||| ||| |||| ||||| | || |||||||||||
Sbjct 2066 TCAGAGTTACTGAGGCTGCCGAAAAGGTTTCCTTGCTTGAGGAAC-AGATAAAGCCTCGT 2124
Query 2303 ACAAATCTTCCACCTCTATTGGTTCCACTCCATGATCGACGACCTGAGAAG-CTCCACTA 2361
| |||||||||||| | ||||||| || | |||||| ||||||||| || ||||||||
Sbjct 2125 GCCAATCTTCCACCTTTGCTGGTTCCTCTTCGTGATCGGCGACCTGAG-AGACTCCACTA 2183
Query 2362 CATTGGTGTTTCCTTTGGGCTTACTTTGGACCTCTTCAGATTT-TGGAGAAAACACAATT 2420
| | ||||| || |||||||||||||| ||||||||| | ||| ||||||||||| || |
Sbjct 2184 CCTCGGTGTCTCTTTTGGGCTTACTTTAGACCTCTTCCG-TTTCTGGAGAAAACATAAAT 2242
Query 2421 TTGCGCCATTCTACGTTAGCCAAATCCCAAGTGCTGTGACTGGTGAGCACACATGTATGC 2480
|||| ||||||||| | || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 2243 TTGCTCCATTCTACATCAGTCAAATACCAAGTGCTGTGACTGGTGAGCACACATGTATGC 2302
Query 2481 TTTTAAAACCCTTAA-A----G-AATGATGAACTAGAAGTCAACGAGTCCGATGAGTTGG 2534
|| | ||||| |||| | | || |||||| | ||||| | ||||| ||||| |||
Sbjct 2303 TTCTGAAACCATTAACATTAAGCAACGATGAATTCGAAGTTGATGAGTCAGATGAACTGG 2362
Query 2535 GATTCTTTACTCCCTTCTATAAAGATTTCAAGATAAGGTTCTCTAAGCTGTTGAGTGACA 2594
| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 2363 GCTTCTTTGCTCCCTTCTATAAAGATTTCAGGATAAGGTTCTCTAAGCTGTTGAGTGATA 2422
Query 2595 AATTCAAGAAGATGGACTATAAACTTGCAATGAGTGTCTTAAACCCCAAGATCAACTTCG 2654
|||||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||
Sbjct 2423 AATTCAAGAAGATGGATTATAAACTTGCAATGAGTGTCTTGAACCCTAAGATTAACTTC- 2481
Query 2655 CC-GAGGTTGATTCTTCAGGGAGTTCATCAGGTGGATTTTTGAAGACACTCAACGGCA-T 2712
|| |||||||||||||| |||| |||| | | |||||||||||||| |||| |||| | |
Sbjct 2482 CCAGAGGTTGATTCTTCGGGGAATTCACCTGATGGATTTTTGAAGAAACTCGACGG-AGT 2540
Query 2713 A-TTATCTCCGTATGATATGGAGAGGCTCAGAGCATATACTGAAAATCT-GACTGACTTC 2770
|| || || |||||||||||||| ||||||||||| |||| ||||| | |||||||
Sbjct 2541 CCTT-TCACCTTATGATATGGAGAGACTCAGAGCATACACTGCCAATCTCGT-TGACTTC 2598
Query 2771 AATCTGGTTTATGACATCTGCAAAACGCTGGCACATCAGTATTTTGAAGAGAAGCTCCCC 2830
|| ||||||||||| ||||||||||| || || ||||| |||||| |||||||||||||
Sbjct 2599 AACCTGGTTTATGATATCTGCAAAACTCTAGCTCATCATTATTTTCAAGAGAAGCTCCCG 2658
Query 2831 GTATCACTGTCATATGTTCAAGCATCTATATTGCTATGCTTGGGGTTGCAGGAGACGGAT 2890
|| || || |||||||||||||||||| || | || || ||||| ||||||||| |||||
Sbjct 2659 GTCTCGCTTTCATATGTTCAAGCATCTGTACTCCTGTGTTTGGGCTTGCAGGAGTCGGAT 2718
Query 2891 TTCTCCAGCATCGAGAGACAAATGCAGTTGGAGAGGGGACAAATACATTCTCTTCTCCTG 2950
||||| ||||| |||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 2719 TTCTCGAGCATTGAGAGACAAATGCAGTTGGAGAGGGGGCAAATACACTCTCTTCTATTG 2778
Query 2951 AAGGTCGCAAGGGAGTTATACAAATATCTCAATGGAGTTGCGGGAAAGGAAATCAAATC- 3009
||||| | || | |||||||||||||| | |||| | | || ||| || | ||||
Sbjct 2779 AAGGTTGGAAAGAAGTTATACAAATATTTGAATGCAATCGCAACAAAAGAGCTTGAATCC 2838
Query 3010 AGCTCTCCCTCGTTTGAAAGAGAGAGAGCTT-ACCGCTCACAATGTATCAGTCGACGATG 3068
| || | ||||| |||||||| |||| |||| | | ||||||| |||||||| ||||| |
Sbjct 2839 ACCT-TACCTCGGTTGAAAGATAGAGTGCTTGAAC-CTCACAAAGTATCAGTAGACGAAG 2896
Query 3069 ATATCAGGGAAGGAGCAAAACAAGTCGAGGAACAAATGAAGAAGGAGAAG-ATTGAAGGA 3127
|| ||||||||||||||||| |||| ||||||||||||| | || ||| || |||| |
Sbjct 2897 ATCTCAGGGAAGGAGCAAAAGAAGTTGAGGAACAAATGA-G--GGC-AAGGATAGAAGAA 2952
Query 3128 TTAATGGATTCTGAGCTTC---AACAATATGTAATTGGGGATAAAGAAGCAGAGGCTCTG 3184
|| |||| ||||||| | |||||| || ||||||||| |||||||| |||||| ||
Sbjct 2953 TTGTTGGACCCTGAGCTGCTTGAACAATTTGCAATTGGGGACAAAGAAGCTGAGGCTTTG 3012
Query 3185 CAACATTCAAAGATCTCTTCAAGTGGTATTATCAGTGTTAAGTCTACCAAATCAGA---- 3240
||| | || |||||||||||||||||| |||||||| || |||| || ||| | ||
Sbjct 3013 CAAAAGTCTAAGATCTCTTCAAGTGGTCTTATCAGTATTGAGTCCACGAAAACTGATAAC 3072
Query 3241 --GAATGAGAA-C------G-GGTTT-GACAAATCCACCAAAAAGAGAAGC-AGTGATAA 3288
||| ||||| | | ||||| || |||||||||||||||||| || | ||||||
Sbjct 3073 AAGAAAGAGAAGCCAACAAGTGGTTTTGATAAATCCACCAAAAAGAGAGGCGA-TGATAA 3131
Query 3289 GCGTTCCTC 3297
|| ||||||
Sbjct 3132 GCATTCCTC 3140
Score = 1404 bits (760), Expect = 0.0
Identities = 1094/1256 (87%), Gaps = 20/1256 (2%)
Strand=Plus/Plus
Query 263 ATGAGGAAGAAGGTTGATGAACGTATCAGGACTCTGATTGAAAACGGTGTCAAATTGAGA 322
|||||||||||||| || |||||||||||||||||||||||||||||||| ||| | |||
Sbjct 1 ATGAGGAAGAAGGTAGACGAACGTATCAGGACTCTGATTGAAAACGGTGTTAAACTCAGA 60
Query 323 CACCGTTCCATGTTTGTAATCATTGGTGAC-AAGTCTCGTGACCAGATAGTGAACCTCCA 381
||||||||||||||||| |||||||||||| ||| |||||||||||||||| || || ||
Sbjct 61 CACCGTTCCATGTTTGTCATCATTGGTGACAAAG-CTCGTGACCAGATAGTTAATCTTCA 119
Query 382 TCATATGTTGTC-AAA-GGCAGTTATTAAATGTAATC-CGAGTGTGTTGTGGTGCTACAA 438
||| || ||||| ||| || | | || | ||| | | |||||| | |||||||||||
Sbjct 120 TCACATTTTGTCAAAATCGCCG--GTCAAGTCTAA-CACAAGTGTGCTATGGTGCTACAA 176
Query 439 GGATAAACTTGACATTAGCAGTCATAAGCAAAAGCGTTCGAAGCAGCTGAAG-AGATTGA 497
| ||| ||| |||||||||||||| || |||| ||| |||||||| ||||| ||| |||
Sbjct 177 GAATAGACTCGACATTAGCAGTCACAATAAAAAACGTGCGAAGCAGTTGAAGAAGA-TGA 235
Query 498 GGGAGAGAGGACAGTTAGATCCAGAGAAACTTGACGCTTTCTCGCGTTTGCTTGATGTTG 557
|||||||||||| ||||| || || ||||| || |||||||| | ||| ||||||| ||
Sbjct 236 AGGAGAGAGGACAATTAGACCCTGAAAAACTAGATGCTTTCTCTCTTTTTCTTGATG-TG 294
Query 558 GAAGA-GTCACTCATTGCTTGTACAAAGATTCTGAACGAATTCTTGGAAATACTTTTGGC 616
| || ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 295 GGGGATGTCACGCATTGCTTGTACAAAGATTCTGAAAGAATTCTTGGGAATACTTTTGGC 354
Query 617 ATGTGCATCTTACAGGATTTTGAAGCTTTAACTCCAAATCTACTAGCAAGAACAATAGAG 676
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 355 ATGTGCATCTTACAGGATTTTGAAGCTCTAACTCCAAATCTACTAGCAAGAACAATAGAG 414
Query 677 ACTGTGGAAGGTGGTGGTTTGGTTGTATTGAT-ATTGCGATCACTTACATCGCTTACTAG 735
|| || ||||| ||||| | |||||||| || ||| | ||||||| | || ||||||||
Sbjct 415 ACAGTTGAAGGGGGTGGGCTAGTTGTATT-ATTATTACAATCACTTGCTTCACTTACTAG 473
Query 736 TCTATGCACTATGGTTATGGATGTCCATGACAGATTCCGAACTGAATCGCATTCTGAGGC 795
||| ||||| |||||||||||||| ||||| ||||| ||||| || || || ||||| ||
Sbjct 474 TCTCTGCACCATGGTTATGGATGTGCATGATAGATTTCGAACCGAGTCACACTCTGAAGC 533
Query 796 TGCCGGCCGTTTCAATGAACGTTTTCTGCTT-TCACTTGCATCTTGCAAAGCATGTGTTG 854
| |||| |||||||||||||| |||||| || ||||| || |||||||||||||||||||
Sbjct 534 TTCCGGACGTTTCAATGAACGATTTCTG-TTATCACTAGCGTCTTGCAAAGCATGTGTTG 592
Query 855 TCATGGATGATGAGTTGAATATTTTGCCGCTTTCCTCGCATATCAGATCTATTACTCAAG 914
|||||||||||||| ||||||| ||||||||||| || |||||||||||||| || |||
Sbjct 593 TCATGGATGATGAGCTGAATATATTGCCGCTTTCGTCTCATATCAGATCTATCACAAAAG 652
Query 915 TTCCAACAGAAA-AGGATTCCGAGGGGCTCTCTGAGGCAGAGCGGGATCTGAAGAGTTTG 973
|||||||| || ||||||| || ||||| ||||||||||| || || ||||||||||||
Sbjct 653 TTCCAACA-AAGGAGGATTCAGAAGGGCTTTCTGAGGCAGAACGAGACCTGAAGAGTTTG 711
Query 974 AAAGAAG-ACCTAAGTGATGATTTTCCTGTTGGTCCGTTAATCAAGAAATGTTGTACATT 1032
||||| | || ||| |||||||||||||||||||| || || || || |||||||||||
Sbjct 712 AAAGATGCAC-TAAACGATGATTTTCCTGTTGGTCCTTTGATTAATAAGTGTTGTACATT 770
Query 1033 GGATCAGGGTAAAGCTGTAGTAACATTTTTCGATGCAATTTTGGATAAGGCTCTCCGCAG 1092
|||||||||||||||||| || ||||||||||||||||| ||||||||| | ||||||||
Sbjct 771 GGATCAGGGTAAAGCTGTTGTCACATTTTTCGATGCAATATTGGATAAGACCCTCCGCAG 830
Query 1093 CATAGTTGCTTTGATTGCAAGTCGAGGACGTGGAAAATCTGCTGCACTTGGTTTAGCTGT 1152
|||||||||| ||||||| ||||| || |||||||||||||||||||||||| |||||||
Sbjct 831 CATAGTTGCTCTGATTGCTAGTCGTGGGCGTGGAAAATCTGCTGCACTTGGTCTAGCTGT 890
Query 1153 TGCCGGGGCTGTTGCTGCTGGGTACTCAAATATTTACATAACTGCACCAAGCCCGGATAA 1212
| | ||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||
Sbjct 891 TACTGGGGCTGTTGCTGCTGGGTACTCTAATATTTACGTAACAGCACCAAGCCCAGATAA 950
Query 1213 CTTGAAGACATTCTTTGAGTTTGTTTGCAAAGGCTTTGATGCACTTGAATATAAGGAGCA 1272
|||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct 951 CTTGAAAACATTCTTTGAGTTTGTTTGCAAAGGTTTTGAAGCACTTGAATATAAGGAACA 1010
Query 1273 CCTTGATTATGATGTTGTGAAAAGTGCAAATCCTGACTTCAAAAAAGCTGTTGTACGGAT 1332
||||| |||||||| |||| ||||| ||||||||||| || ||||| | ||||||||
Sbjct 1011 TCTTGAATATGATGTCGTGAGAAGTGTGAATCCTGACTTTAATAAAGCCATCGTACGGAT 1070
Query 1333 AAATATCTTCAAGCAGCATAGACAAACTATCCAGTATATACAACCACACGAACATGAGAA 1392
|||||| ||||||||||| || ||||||||||||||||||||||| || |||||||| ||
Sbjct 1071 AAATATATTCAAGCAGCACAGGCAAACTATCCAGTATATACAACCGCATGAACATGAAAA 1130
Query 1393 GCTTTCACAAGTAGAGCTGTTGGTTATTGATGAAGCAGCAGCTATTCCTTTACCAGTTGT 1452
||| |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1131 GCTCTCACAAGTTGAGCTGTTGGTTATTGATGAAGCGGCAGCTATTCCTTTGCCAGTTGT 1190
Query 1453 GAAGTCTTTGCTTGGTCCTTATCTAGTTTTCCTATCCTCAACTGTCAGTGGCTATG 1508
||||||| | ||||| ||||| ||||||||| |||| || ||||||||||| ||||
Sbjct 1191 GAAGTCTCTACTTGGCCCTTACCTAGTTTTCTTATCATCTACTGTCAGTGGGTATG 1246
> Ahg939010 jgi|Araly1|939010|scaffold_503201.1
Length=1825
Score = 593 bits (321), Expect = 2e-168
Identities = 431/478 (90%), Gaps = 32/478 (7%)
Strand=Plus/Plus
Query 1973 GGAAAGATATCTGAGAACTCTGCCCTTCAAAGTTTAAGGGATGGCCATTCACCATACGGA 2032
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 717 GGAAAGATATCTGAGAACTCAGCCCTTCAAAGTTTAAGGGATGGCCATTCACCATATGGA 776
Query 2033 GACCAAATTCCATGGAAATTCTGTGAACAATTCCGGGACACTGAATTTCCAGGTTTCTCT 2092
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 777 GACCAAATTCCATGGAAATTCTGTGAACAATTCCGGGATACTGAATTTCCAGGTTTCTCT 836
Query 2093 GGTGCTCGGATAGTTCGCATAGCAGTCCACCCTAACGCCATGAAGATGGGATATGGTTCT 2152
|| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 837 GGGGCTCGGATAGTTCGCATAGCAGTCTACCCTTACGCCATGAAGATGGGATATGGTTCT 896
Query 2153 GCTGCAGTTGAACTCTTGACCAGATATTTTGAGGGTCAGATAGCTCCAATCTCAGAAGCT 2212
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 897 GCTGCAGTTGAACTCTTGAGCAGATATTTTGAGGGTCAGATAGCTCCAATCTCAGAAGCT 956
Query 2213 GAAGATAAAGTTGATGTGGAGCATGCACCCATTAAAGT-GACTGAGGCTGCTGAGAAGGT 2271
|| ||||||||||||||||||||||||||||||||||| | | |||||||| ||||||||
Sbjct 957 GATGATAAAGTTGATGTGGAGCATGCACCCATTAAAGTCG-CAGAGGCTGCGGAGAAGGT 1015
Query 2272 CTCCATGCTCGAGGAGCAAGTAAAGCCTCGTACAAATCTTCCACCTCTATTGGTTCCACT 2331
|||||||||||||||||||||||||||||| |||||||||| || || | | |
Sbjct 1016 CTCCATGCTCGAGGAGCAAGTAAAGCCTCGCACAAATCTTC----TC-AT-G-----A-T 1063
Query 2332 CCATGATCGACGACCTGAGAAGCTCCACTACATTGGTGTTTCCTTTGGGCTTACTTTGGA 2391
| || | || | ||| ||||||||||||||||||||||||||||| ||
Sbjct 1064 C---GA-CTAC--C-TGATAAGCTCCACTACATTGGTGTTTCCTTTGG----AC------ 1106
Query 2392 CCTCTTCAGATTTTGGAGAAAACACAATTTTGCGCCATTCTACGTTAGCCAAATCCCA 2449
| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1107 C-TCTTCCGATTTTGGAGAAAACATAATTTTGCGCCATTCTACGTTAGCCAAATCCCA 1163
Score = 411 bits (222), Expect = 2e-113
Identities = 282/310 (91%), Gaps = 7/310 (2%)
Strand=Plus/Plus
Query 2981 AATGGAGTTGCGGGAAAGGAAATCAAATCAGCTCTCCCTCGTTTGAAAGAGAGAGAGCTT 3040
|||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||
Sbjct 1476 AATGGAGTTGCGGGAAAGGAGATCGAATCAGCCCTCCCTCGTTTGAAAGAGAGAGAGCTT 1535
Query 3041 --ACCGCTCACAATGTATCAGTCGACGATGATATCAGGGAAGGAGCAAAACAAGTCGAGG 3098
|||| ||||||||| |||||| ||| ||||||||||||||||| |||||||||||
Sbjct 1536 GAACCG--GGCAATGTATCGGTCGACTATGGTATCAGGGAAGGAGCAACACAAGTCGAGG 1593
Query 3099 AACAAATGAAGAAGGAGAAGATTGAAGGATTAATGGATTCTGAGCTTCAACAATATGTAA 3158
||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1594 AACAAATGATGAAGGAGAAGGTTGAAGGATTAATGGATTCTGAGCTTCAACAATATGTAA 1653
Query 3159 TTGGGGATAAAGAAGCAGAGGCTCTGCAACATTCAAAGATCTCTTCAAGTGGTATTATCA 3218
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1654 CAGGGGACAAAGAAGCAGAGGCTCTGCAACATTCAAAGATCCCTTCAAGTGGTATTATCA 1713
Query 3219 GTGT-T-AAGTCTACCAAATCAGAGAATGAGAACGGGTTT-GACAAATCCACCAAAAAGA 3275
|||| | ||||| || |||| ||||||||||| |||||| ||||||||||| |||||||
Sbjct 1714 GTGTGTTAAGTCCACTGAATCGGAGAATGAGAATGGGTTTTGACAAATCCACTAAAAAGA 1773
Query 3276 GAAGCAGTGA 3285
||||||||||
Sbjct 1774 GAAGCAGTGA 1783
Score = 213 bits (115), Expect = 7e-54
Identities = 126/131 (96%), Gaps = 2/131 (2%)
Strand=Plus/Plus
Query 2606 ATGGACTATAAACTTGCAATGAGTGTCTTAAACCCCAAGATCAACTTCGC-CGAGGTTGA 2664
|||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||
Sbjct 1197 ATGGACTATAAACTTGCAATGAGTGTCTTAAACCCCAACATCAACTTC-CACGAGGTTGA 1255
Query 2665 TTCTTCAGGGAGTTCATCAGGTGGATTTTTGAAGACACTCAACGGCATATTATCTCCGTA 2724
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1256 TTCTTCAGGGAGTTCATCAGGTGGATTTTTGAAGAGACTCGACGGCATATTATCTCCGTA 1315
Query 2725 TGATATGGAGA 2735
|||||||||||
Sbjct 1316 TGATATGGAGA 1326
Score = 206 bits (111), Expect = 1e-51
Identities = 123/129 (95%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 2777 GTTTATGACATCTGCAAAACGCTGGCACATCAGTATTTTGAAGAGAAGCTCCCCGTATCA 2836
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct 1328 GTTTATGACATCTGCAAAACGCTGGCACATCAGTATTTTGAAGAGAAGCTCCCCATATGA 1387
Query 2837 CTGTCATATGTTCAAGCATCTATATTGCTATGCTTGGGGTTGCAGGAGACGGATTTCTCC 2896
|||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 1388 CTGTCATATGTTCAGGCATCTATATTGCTATGCTTGGGGTTGCAGGAGGCGGACTTCTCT 1447
Query 2897 AGCATCGAG 2905
|||||||||
Sbjct 1448 AGCATCGAG 1456
Score = 187 bits (101), Expect = 4e-46
Identities = 134/149 (90%), Gaps = 5/149 (3%)
Strand=Plus/Plus
Query 1364 CAGTATATACAACCACACGAACATGAGAAGCTTTCACAAGTAGAGCTGTTGGTTATTGAT 1423
||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||
Sbjct 366 CAGTATATACAACCACAGGAGCATGAGAAGCTCTCACAAGTAGAGCTGTTGGTTATTGAT 425
Query 1424 GAAGCAG-CAGCTATTCCTTTACCAGTTGTG---AAGTCTTTGCTTGGTCCTTATCTAGT 1479
||||| | |||||||| |||| ||||||||| ||||||||||| ||||||||||| ||
Sbjct 426 GAAGC-GTCAGCTATTTCTTTGCCAGTTGTGGTGAAGTCTTTGCTAGGTCCTTATCTGGT 484
Query 1480 TTTCCTATCCTCAACTGTCAGTGGCTATG 1508
||||||||| ||||||||||| || ||||
Sbjct 485 TTTCCTATCGTCAACTGTCAGCGGGTATG 513
Score = 154 bits (83), Expect = 4e-36
Identities = 89/92 (97%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1503 GCTATGAAGGCACTGGGAGATCTTTGTCCCTGAAACTCCTCCAACAATTAGATGAGCAAA 1562
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 619 GCTATGAAGGCACTGGGAGATCTTTGTCCCTGAAATTCCTCCAACAATTAGATGAGCAAA 678
Query 1563 GTCGGGCTCCTGCTACTGGTCTTGAAGGCTCT 1594
| |||||||||||||||||||||||||| |||
Sbjct 679 GCCGGGCTCCTGCTACTGGTCTTGAAGGGTCT 710
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 131260569277
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5