BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT3G58340.1 Length=978 Score E Sequences producing significant alignments: (Bits) Value Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754 773 0.0 Ahg938834 jgi|Araly1|938834|scaffold_503025.1 425 2e-118 Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854 303 1e-81 Ahg924373 jgi|Araly1|924373|scaffold_105654.1 272 3e-72 Ahg937123 jgi|Araly1|937123|scaffold_501314.1 167 2e-40 Ahg930958 jgi|Araly1|930958|scaffold_303415.1 154 1e-36 Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598 124 1e-27 Ahg938811 jgi|Araly1|938811|scaffold_503002.1 110 3e-23 Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994 93.5 3e-18 Ahg905868 jgi|Araly1|905868|Al_scaffold_0003_2996 89.8 3e-17 > Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754 Length=918 Score = 773 bits (418), Expect = 0.0 Identities = 471/497 (95%), Gaps = 2/497 (0%) Strand=Plus/Plus Query 1 ATGGCGAAGGCAGTTGATAAGAAGTTTTGTTGGGAGATAAAGAATTTCTCCTCTTTGAAC 60 ||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1 ATGGCCAAGGGAGTTGATAAGAAGTTTTGTTGGGAGATAAAGGATTTCTCCTCTTTGAAC 60 Query 61 TCTGAGAGATGTCATTCTGTTCCAGTCGTGATTGGTGACTGCAAATGGCGTCTTGTTGCC 120 |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 61 TCTGAGAGATGTAATTCTGTTCCAGTCGTGATTGGTGACTACAAATGGCGTCTTGTTGCC 120 Query 121 TTTCCTAAGGGATATAAAGCAGATTACCTTTCTTTGTATTTAGAAGTTGCTGATTTTAAA 180 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 121 TTTCCTAAGGGATATAAAGCAGATTACTTTTCTTTGTATTTAGAAGTTGCTGATTTTCAA 180 Query 181 TCATTGCCTTCTGGATGGAGAAGATACGTCAAATTTCGTGCATGTATAGTAAATCAGCTT 240 |||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||| Sbjct 181 TCATTGCCTTGTGGATGGAGAAGATACGTCAAATTTAGCGCAAGTATAGTAAATCAGCTT 240 Query 241 TCGCAAGAACTCTCTGTACAACAAGAAACGCAGCGCTGGTTTGATCAGAATGCTCCCGGA 300 ||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||| Sbjct 241 TCGCAAGAACTCTCTGTACAACAAGAAACACACCGCTGGTTTGATCAGAATGCTCGCGGA 300 Query 301 TGGGGTTTTGAAAACATGCTTCTACTTACCGAACTTAATGCCAAAGATGGTGGATTTTTG 360 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 301 TGGGGTTTTGAAAACATGCTTCCACTTACCGAACTTAATGCCAAAGATGGTGGATTTTTG 360 Query 361 GTAAATGGACAAGTCATGATTGTTGCTGAAGTAGAATTTCTTGAAGTTATTGGCACACTA 420 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 361 GTAAATGGACAAGTCATGATTGTTGCTGAAGTAGAATTTCATGAAGTTATTGGCACACTA 420 Query 421 GATGAATCAGAGGAA-ATTATTAAGTCTAGTGATTTAATCAACAAGACTCAAGAGGTGGC 479 ||||||||| || || |||||| ||||| ||||||| ||||||||| || ||| ||||| Sbjct 421 GATGAATCAAAG-AATATTATTCTGTCTAATGATTTACTCAACAAGAGTCGAGAAGTGGC 479 Query 480 TCAACAAGTGAAGGAAA 496 ||||||||||||||||| Sbjct 480 TCAACAAGTGAAGGAAA 496 Score = 726 bits (393), Expect = 0.0 Identities = 457/488 (94%), Gaps = 3/488 (1%) Strand=Plus/Plus Query 493 GAA-ATTATTCAGCCTAATGATTTAATCAACAAGACTCAAGAGGTGGCTCAACAAGTGAA 551 ||| ||||||| | ||||||||||| ||||||||| || ||| ||||||||||||||||| Sbjct 432 GAATATTATTCTGTCTAATGATTTACTCAACAAGAGTCGAGAAGTGGCTCAACAAGTGAA 491 Query 552 GGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACG 611 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 492 GGAAAGCATTGTTGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGCCG 551 Query 612 TATTTTTAAAAAACATCCAGACATTGCAGTAGGATTCCAAGTAAAGAACCAACATCTGAG 671 ||||||| |||| || ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 552 TATTTTTGAAAAGCACCCAGAGATTGCAGTAGGGTTCCAAGTAAAGAACCAACATCTGAG 611 Query 672 GAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGCCAATCTCTCCAGGA 731 ||||||||||||||||||||| |||||||||||||||||| |||| |||||||| ||||| Sbjct 612 GAAAACATTCATGAATTTCCTGGTCAACGTAATTGAGACGCTGTGTCAATCTCTTCAGGA 671 Query 732 GCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCGTTGACATACTTGAAAGATGCGGG 791 |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 672 GCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCACTGACATATTTGAAAGATGCGGG 731 Query 792 ATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAGAAAAGAAGGAGAAAGA 851 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 732 ATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCAAGTGAAAGAAAAGAAGGAGAAAGA 791 Query 852 ACAGTCTGGTTTGATCATACTCCAAGGAATAGAGCAA-CAACTTCATGAATTGATGCACA 910 ||| ||||||||| |||||||||||||||| ||| || || |||||||| |||||||||| Sbjct 792 ACAATCTGGTTTGGTCATACTCCAAGGAATTGAG-AAGCAGCTTCATGACTTGATGCACA 850 Query 911 AGTGTGAGAAGAAGAAGTCAGAGGTTCTGTCCGTTGGAGCTCCTCTAAAGTTCGATGATG 970 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 851 AGTGTGAGAAGAAGAAGTCAGAGGTTTTGTCCATTGGAGCTCCTCTAAAGTTCGATGATG 910 Query 971 TTGTTTGA 978 |||||||| Sbjct 911 TTGTTTGA 918 > Ahg938834 jgi|Araly1|938834|scaffold_503025.1 Length=1017 Score = 425 bits (230), Expect = 2e-118 Identities = 311/350 (89%), Gaps = 6/350 (2%) Strand=Plus/Plus Query 539 CTCAACAAGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAG 598 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| | Sbjct 535 CTCAACAAGTGAAGGAAAGCATTGATGTCAATGGGTTTCAAGTTCATCCTTCACAGGTGG 594 Query 599 AATCTGTGAGACGTATTTTTAAAAAACATCCAGACATTGCAGTAGGA-TTCCAAGTAAAG 657 |||| |||||| |||||||| ||||||| |||||||||||| || || |||||||||||| Sbjct 595 AATCCGTGAGATGTATTTTTGAAAAACACCCAGACATTGCAATA-GATTTCCAAGTAAAG 653 Query 658 AACCAACATCTGAGGAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGC 717 ||||||||||||||||||||||||||||||||||| || |||||||| |||||| ||||| Sbjct 654 AACCAACATCTGAGGAAAACATTCATGAATTTCCTGGTTAACGTAATCGAGACGCTGTGC 713 Query 718 CAATCTCTCCAGGAGCTCTC-AAATGAAGATCTTGTGGAAGTAGACATTGCGTTGACATA 776 ||| |||| ||||||||||| ||| ||||||||| |||| | ||||||||| ||||||| Sbjct 714 CAACCTCTTCAGGAGCTCTCCAAA-GAAGATCTTTTGGAGGCAGACATTGCACTGACATA 772 Query 777 CTTGAAAGATGCGGGATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAGA 836 | |||||||||| |||||||||||||||||||| |||||||||||||| | || ||||| Sbjct 773 CGTGAAAGATGCAGGATTTAAGGTGGATTGGTTGGAGAAGAAGCTGGAGGAAGTAAAAGA 832 Query 837 AAAGAAGGAGAAAGAACAGTCTGGTTTGATC-ATACTCCAAGGAATAGAG 885 |||||||| |||||||| ||| |||||| || | ||||||| ||| ||| Sbjct 833 AAAGAAGGGGAAAGAACTGTCCGGTTTGCTCCAG-CTCCAAGAAATGGAG 881 > Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854 Length=1308 Score = 303 bits (164), Expect = 1e-81 Identities = 275/328 (84%), Gaps = 10/328 (3%) Strand=Plus/Plus Query 539 CTCAACAAGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAG 598 |||||||| ||||||||| ||| ||| | ||||||||||||||||||||||||||||| | Sbjct 848 CTCAACAACTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT-G 906 Query 599 AA-TCTGTGAGACGTATTTTTAAAAAACATCCAGACATTGCAGTAGGATTCCAAGTAAAG 657 || | |||||| ||||||||| ||||| | ||||||||||||||||||||||| | |||| Sbjct 907 AAATTTGTGAGCCGTATTTTTGAAAAATACCCAGACATTGCAGTAGGATTCCATGCAAAG 966 Query 658 AACCAACATCTGAGGAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGA-TGTG 716 ||||||||||| | || | ||| ||||||| |||| ||| | |||| ||||| | |||| Sbjct 967 AACCAACATCTTAAGACAGCATGCATGAATGTCCTCCTCAGCCTAATCGAGAC-ACTGTG 1025 Query 717 CCAATCTC-TCCAGGAGCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCGT-TGACA 774 || || | || |||||||||||||||||||| | ||||||| ||||| ||| | | ||| Sbjct 1026 TCAGTCACCTC-AGGAGCTCTCAAATGAAGATATGGTGGAAGCAGACAATGC-TCTAACA 1083 Query 775 TACT-TGAAAGATGCGGGATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAA 833 || | ||||||||||||| ||||||||||||||||| |||| ||||||||| | || || Sbjct 1084 TA-TGTGAAAGATGCGGGCTTTAAGGTGGATTGGTTGGAGATGAAGCTGGAGGAAGTAAA 1142 Query 834 AGAAAAGAAGGAGAAAGAACAGTCTGGT 861 ||||||||||| | ||| ||| ||||| Sbjct 1143 AGAAAAGAAGGTGGTAGAGCAGACTGGT 1170 > Ahg924373 jgi|Araly1|924373|scaffold_105654.1 Length=1003 Score = 272 bits (147), Expect = 3e-72 Identities = 304/377 (81%), Gaps = 21/377 (6%) Strand=Plus/Plus Query 546 AGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 605 ||| || ||||||| || ||||||||||||||||||||||||||||||| ||||||||| Sbjct 551 AGTAAAAGAAAGCA-TG--GTTAATGGGTTTCAAGTTCTTCCTTCACAGGAAGAATCTGT 607 Query 606 GAGACGTATTTTTAAAAAACATCCAGACATTGCAGTAGGA-TTCCAAGTAAAGAACCAAC 664 ||||||||| ||| ||| |||||||||||||| |||| | |||| | ||||||||||| Sbjct 608 GAGACGTATATTTGAAAGACATCCAGACATTGTGGTAG-ACTTCCGTGCAAAGAACCAAC 666 Query 665 ATCTGAGGAAAACATTCATGAATTTCCTTG-TCAACGTAATTGAGACGATGTGCCAA-TC 722 | || |||| ||||| ||||||||| ||| ||| | | || |||||| ||||| || || Sbjct 667 AGCTCAGGACAACATGGATGAATTTC-TTGCTCAGCTTGATCGAGACGCTGTGC-AAGTC 724 Query 723 TCTCCAGGAGCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCGTTGACATACTTGAA 782 | |||||||| || ||||| ||||||||||| | |||||||||| ||||| ||||||| Sbjct 725 AATTCAGGAGCTTTCCAATGACGATCTTGTGGATGCAGACATTGCGCTGACACACTTGAA 784 Query 783 AGATGCGGGA-TTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAGAAAAGA 841 || || | | |||||||| |||||| | || |||||||| || || || |||||||||| Sbjct 785 AGCTGTGA-ACTTTAAGGTAGATTGGCTGGAAAAGAAGCTTGATCAAGTAAAAGAAAAGA 843 Query 842 AGGAGAAAGAACAGTCTGGTT-TGATC-ATACTCCAAGGAATAGA-GCAACA-ACTTCAT 897 | ||||||||| ||||| || || | | |||||||| || ||| | || | | ||| | Sbjct 844 AAAAGAAAGAACTGTCTG-TTGTGGCCCA-ACTCCAAGAAACAGAAGAAA-ATA-TTC-T 898 Query 898 GAA-TTGATGCACAAGT 913 ||| |||| ||| |||| Sbjct 899 GAAATTGAAGCAAAAGT 915 > Ahg937123 jgi|Araly1|937123|scaffold_501314.1 Length=1048 Score = 167 bits (90), Expect = 2e-40 Identities = 230/297 (77%), Gaps = 12/297 (4%) Strand=Plus/Plus Query 553 GAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACGT 612 |||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||| Sbjct 531 GAAAGCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCCGTGAAACGT 590 Query 613 ATTTTTAAAAAACATCCAGACATTGCAGTAG-GATTCCAAGTAAAGAACCAACATCTGAG 671 || || ||| ||| |||||||| ||| ||| | ||| | |||| |||||||||| |||| Sbjct 591 ATATTCGAAAGACACCCAGACATGGCATTAGAGTTTCGA-GTAATGAACCAACATATGAG 649 Query 672 GAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGCCAATCTCTCCAGGA 731 || | || ||| ||| |||| ||||| |||| ||||| ||||||| || || | || Sbjct 650 GACATTATGCATAAATCTCCTCCTCAACATAATCGAGACTTTGTGCCAGTCACTGAAAGA 709 Query 732 GC-TCTCAAATGAAGATCTTGTGG--AAGTAGACATTGCGTTGACATACTTGAAAGATGC 788 | | || | | | || || | || ||| ||| | || | | |||| |||||||| | Sbjct 710 -CATTTCCATTCATGAACT-G-GGCCAAGCAGAGAAAGCACTAAGATACCTGAAAGATTC 766 Query 789 GGGA-TTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAG-AAAAGAAG 843 || | ||||||||||||||||||||| | || ||||| | || |||| |||||||| Sbjct 767 GG-ACTTTAAGGTGGATTGGTTAGAGCATAAACTGGAGGAAGT-AAAGGAAAAGAAG 821 > Ahg930958 jgi|Araly1|930958|scaffold_303415.1 Length=959 Score = 154 bits (83), Expect = 1e-36 Identities = 202/259 (78%), Gaps = 10/259 (4%) Strand=Plus/Plus Query 560 TTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACGTATTTTTA 619 ||||||| |||||||||||||||||||||||||||| |||||||||| |||||| || Sbjct 416 TTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAACGTATATTCG 475 Query 620 AAAAACATCCAGACATTGCAGTAGGATTCCAAGTAAAGAACCAACATCTGAGGAAAACAT 679 ||||||| |||||||| ||| || ||||| || ||||||||||||| ||| || | ||| Sbjct 476 AAAAACACCCAGACATGGCACTAAAATTCCGAGCAAAGAACCAACATTTGAAGACATCAT 535 Query 680 TCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGCCAATCTCTCCAGGAGCTCTCAA 739 ||| ||| |||| ||| | |||| ||||| ||||||| || || || || || || | Sbjct 536 GCATAAATGTCCTCCTCAGCTTAATCAAGACGTTGTGCCAGTCACTGCAAGACCTTTCCA 595 Query 740 ATGAAGATCTTGTGG--AAGTAGA-CATTGCGTTGACATA-CTTGAA-AGATGCGGGATT 794 ||| || || | || ||| ||| || || | ||||| || ||| | || ||| || Sbjct 596 TTGATGACCT-G-GGCCAAGCAGAGCAA-GCACTAACATATCT-GAATA-ATTTGGGCTT 650 Query 795 TAAGGTGGATTGGTTAGAG 813 ||||||||||||||| ||| Sbjct 651 TAAGGTGGATTGGTTGGAG 669 > Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598 Length=828 Score = 124 bits (67), Expect = 1e-27 Identities = 122/147 (83%), Gaps = 10/147 (7%) Strand=Plus/Plus Query 546 AGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 605 ||| || |||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 450 AGTAAATGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 509 Query 606 GA-GACGTATTTTTAAAAAACATCCAGACATTGCAGT-AGGATTCCAAGT--AAAGAACC 661 || || || |||||| ||| || |||||||||||| | | ||||| || |||||||| Sbjct 510 GAAGA-GTCTTTTTATAAAGCACCCAGACATTGCA-TCACAATTCC--GTCCAAAGAACC 565 Query 662 AACATCTGAGGAAAA-CATTCATGAAT 687 ||| ||||| || | ||| | ||||| Sbjct 566 CACACCTGAG-AACAGCATACTTGAAT 591 > Ahg938811 jgi|Araly1|938811|scaffold_503002.1 Length=1099 Score = 110 bits (59), Expect = 3e-23 Identities = 111/135 (82%), Gaps = 8/135 (6%) Strand=Plus/Plus Query 562 GATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACGTATTTTTAAA 621 ||||| ||||||||||||||||||||||||||||| | | |||||| ||||||||| || Sbjct 651 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGAGCCGTATTTTTGAA 710 Query 622 AAACATCCAGACATTGCAGT-AGGATTCCAAGTA-AA-GAACCAACATCTGAGGAAAA-C 677 ||||| ||||| | |||| | || || || ||| || ||||||| ||||||| || | | Sbjct 711 AAACACCCAGAGACTGCA-TCAGAATGCC--GTACAAAGAACCAAGATCTGAG-AACATC 766 Query 678 ATTCATGAATTTCCT 692 || ||||||| |||| Sbjct 767 ATACATGAATGTCCT 781 > Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994 Length=891 Score = 93.5 bits (50), Expect = 3e-18 Identities = 77/89 (87%), Gaps = 6/89 (7%) Strand=Plus/Plus Query 552 GGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGA-GAC 610 ||||| | | ||||| |||||||||||||||||||||||||||||||||||||||| | | Sbjct 432 GGAAACCGTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAG-C 490 Query 611 GTATT-TTTAAAAAACATCCA-GACATTG 637 || || ||| ||||||| ||| || |||| Sbjct 491 GT-TTGTTTGAAAAACA-CCAAGATATTG 517 > Ahg905868 jgi|Araly1|905868|Al_scaffold_0003_2996 Length=882 Score = 89.8 bits (48), Expect = 3e-17 Identities = 230/315 (73%), Gaps = 24/315 (8%) Strand=Plus/Plus Query 562 GATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGA-GACGTATT-TTTA 619 ||||| ||||| ||||||||||||||||||||||||||||| |||| | | | || ||| Sbjct 460 GATGTCAATGGCTTTCAAGTTCTTCCTTCACAGGTAGAATCAGTGAAG-CTT-TTGTTTG 517 Query 620 AAAAACATCCA-GACATTGCAGT-AGGATTCCAAGTAAAGAA-CCAACATCTGAGGAAAA 676 ||| || ||| || ||||| | | ||| | |||| || ||| || ||| || Sbjct 518 AAAGTCA-CCAAGATTTTGCA-TCAAAATTTCGTCTAAATAATCCAT-ATATGAAGACGG 574 Query 677 CATTCATGAAT-TTC-CTTGTCAACGTAATTGAGACGATGTGCCAATCTC-TCCAGGAGC 733 ||| ||||||| ||| |||| | | ||| | ||| | |||| ||| | || || | | Sbjct 575 CATACATGAATGTTCTCTTG--AGCTTAACCCAAACGCTATGCCGATCGCCTCAAGAA-C 631 Query 734 TCTCAAATGAAGATCT-TGTGGAAGTAGACATTGCGTTGACATACTTGAAAGATGC-GGG 791 |||| ||||| | ||| | || | | | | ||| || |||| |||| ||| || ||| Sbjct 632 TCTCCAATGATGGTCTCTTTG-ATGCGGGCGCTGCACTGTCATATTTGAGAGAAGCAGGG 690 Query 792 ATTTAAGGTGGATTGGTTAGAGAAGAAGCT-GGACCATGTGAAAG-AAAAGAAGGAGAAA 849 |||||| |||||||||| |||||||| || || | || |||| |||||||| ||||| Sbjct 691 -TTTAAGTTGGATTGGTTGGAGAAGAAACTTGGTGAA-GT-AAAGGAAAAGAAGAAGAAA 747 Query 850 GAACAGTCTGGTTTG 864 ||| || || ||||| Sbjct 748 GAAGAGGCTTGTTTG 762 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36331139901 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5