BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G58340.1
Length=978
Score E
Sequences producing significant alignments: (Bits) Value
Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754 773 0.0
Ahg938834 jgi|Araly1|938834|scaffold_503025.1 425 2e-118
Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854 303 1e-81
Ahg924373 jgi|Araly1|924373|scaffold_105654.1 272 3e-72
Ahg937123 jgi|Araly1|937123|scaffold_501314.1 167 2e-40
Ahg930958 jgi|Araly1|930958|scaffold_303415.1 154 1e-36
Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598 124 1e-27
Ahg938811 jgi|Araly1|938811|scaffold_503002.1 110 3e-23
Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994 93.5 3e-18
Ahg905868 jgi|Araly1|905868|Al_scaffold_0003_2996 89.8 3e-17
> Ahg898788 jgi|Araly1|898788|Al_scaffold_0005_2754
Length=918
Score = 773 bits (418), Expect = 0.0
Identities = 471/497 (95%), Gaps = 2/497 (0%)
Strand=Plus/Plus
Query 1 ATGGCGAAGGCAGTTGATAAGAAGTTTTGTTGGGAGATAAAGAATTTCTCCTCTTTGAAC 60
||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1 ATGGCCAAGGGAGTTGATAAGAAGTTTTGTTGGGAGATAAAGGATTTCTCCTCTTTGAAC 60
Query 61 TCTGAGAGATGTCATTCTGTTCCAGTCGTGATTGGTGACTGCAAATGGCGTCTTGTTGCC 120
|||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 61 TCTGAGAGATGTAATTCTGTTCCAGTCGTGATTGGTGACTACAAATGGCGTCTTGTTGCC 120
Query 121 TTTCCTAAGGGATATAAAGCAGATTACCTTTCTTTGTATTTAGAAGTTGCTGATTTTAAA 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 121 TTTCCTAAGGGATATAAAGCAGATTACTTTTCTTTGTATTTAGAAGTTGCTGATTTTCAA 180
Query 181 TCATTGCCTTCTGGATGGAGAAGATACGTCAAATTTCGTGCATGTATAGTAAATCAGCTT 240
|||||||||| ||||||||||||||||||||||||| | ||| |||||||||||||||||
Sbjct 181 TCATTGCCTTGTGGATGGAGAAGATACGTCAAATTTAGCGCAAGTATAGTAAATCAGCTT 240
Query 241 TCGCAAGAACTCTCTGTACAACAAGAAACGCAGCGCTGGTTTGATCAGAATGCTCCCGGA 300
||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||||
Sbjct 241 TCGCAAGAACTCTCTGTACAACAAGAAACACACCGCTGGTTTGATCAGAATGCTCGCGGA 300
Query 301 TGGGGTTTTGAAAACATGCTTCTACTTACCGAACTTAATGCCAAAGATGGTGGATTTTTG 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 301 TGGGGTTTTGAAAACATGCTTCCACTTACCGAACTTAATGCCAAAGATGGTGGATTTTTG 360
Query 361 GTAAATGGACAAGTCATGATTGTTGCTGAAGTAGAATTTCTTGAAGTTATTGGCACACTA 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 361 GTAAATGGACAAGTCATGATTGTTGCTGAAGTAGAATTTCATGAAGTTATTGGCACACTA 420
Query 421 GATGAATCAGAGGAA-ATTATTAAGTCTAGTGATTTAATCAACAAGACTCAAGAGGTGGC 479
||||||||| || || |||||| ||||| ||||||| ||||||||| || ||| |||||
Sbjct 421 GATGAATCAAAG-AATATTATTCTGTCTAATGATTTACTCAACAAGAGTCGAGAAGTGGC 479
Query 480 TCAACAAGTGAAGGAAA 496
|||||||||||||||||
Sbjct 480 TCAACAAGTGAAGGAAA 496
Score = 726 bits (393), Expect = 0.0
Identities = 457/488 (94%), Gaps = 3/488 (1%)
Strand=Plus/Plus
Query 493 GAA-ATTATTCAGCCTAATGATTTAATCAACAAGACTCAAGAGGTGGCTCAACAAGTGAA 551
||| ||||||| | ||||||||||| ||||||||| || ||| |||||||||||||||||
Sbjct 432 GAATATTATTCTGTCTAATGATTTACTCAACAAGAGTCGAGAAGTGGCTCAACAAGTGAA 491
Query 552 GGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACG 611
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 492 GGAAAGCATTGTTGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGCCG 551
Query 612 TATTTTTAAAAAACATCCAGACATTGCAGTAGGATTCCAAGTAAAGAACCAACATCTGAG 671
||||||| |||| || ||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 552 TATTTTTGAAAAGCACCCAGAGATTGCAGTAGGGTTCCAAGTAAAGAACCAACATCTGAG 611
Query 672 GAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGCCAATCTCTCCAGGA 731
||||||||||||||||||||| |||||||||||||||||| |||| |||||||| |||||
Sbjct 612 GAAAACATTCATGAATTTCCTGGTCAACGTAATTGAGACGCTGTGTCAATCTCTTCAGGA 671
Query 732 GCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCGTTGACATACTTGAAAGATGCGGG 791
|||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct 672 GCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCACTGACATATTTGAAAGATGCGGG 731
Query 792 ATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAGAAAAGAAGGAGAAAGA 851
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 732 ATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCAAGTGAAAGAAAAGAAGGAGAAAGA 791
Query 852 ACAGTCTGGTTTGATCATACTCCAAGGAATAGAGCAA-CAACTTCATGAATTGATGCACA 910
||| ||||||||| |||||||||||||||| ||| || || |||||||| ||||||||||
Sbjct 792 ACAATCTGGTTTGGTCATACTCCAAGGAATTGAG-AAGCAGCTTCATGACTTGATGCACA 850
Query 911 AGTGTGAGAAGAAGAAGTCAGAGGTTCTGTCCGTTGGAGCTCCTCTAAAGTTCGATGATG 970
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 851 AGTGTGAGAAGAAGAAGTCAGAGGTTTTGTCCATTGGAGCTCCTCTAAAGTTCGATGATG 910
Query 971 TTGTTTGA 978
||||||||
Sbjct 911 TTGTTTGA 918
> Ahg938834 jgi|Araly1|938834|scaffold_503025.1
Length=1017
Score = 425 bits (230), Expect = 2e-118
Identities = 311/350 (89%), Gaps = 6/350 (2%)
Strand=Plus/Plus
Query 539 CTCAACAAGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAG 598
|||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |
Sbjct 535 CTCAACAAGTGAAGGAAAGCATTGATGTCAATGGGTTTCAAGTTCATCCTTCACAGGTGG 594
Query 599 AATCTGTGAGACGTATTTTTAAAAAACATCCAGACATTGCAGTAGGA-TTCCAAGTAAAG 657
|||| |||||| |||||||| ||||||| |||||||||||| || || ||||||||||||
Sbjct 595 AATCCGTGAGATGTATTTTTGAAAAACACCCAGACATTGCAATA-GATTTCCAAGTAAAG 653
Query 658 AACCAACATCTGAGGAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGC 717
||||||||||||||||||||||||||||||||||| || |||||||| |||||| |||||
Sbjct 654 AACCAACATCTGAGGAAAACATTCATGAATTTCCTGGTTAACGTAATCGAGACGCTGTGC 713
Query 718 CAATCTCTCCAGGAGCTCTC-AAATGAAGATCTTGTGGAAGTAGACATTGCGTTGACATA 776
||| |||| ||||||||||| ||| ||||||||| |||| | ||||||||| |||||||
Sbjct 714 CAACCTCTTCAGGAGCTCTCCAAA-GAAGATCTTTTGGAGGCAGACATTGCACTGACATA 772
Query 777 CTTGAAAGATGCGGGATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAGA 836
| |||||||||| |||||||||||||||||||| |||||||||||||| | || |||||
Sbjct 773 CGTGAAAGATGCAGGATTTAAGGTGGATTGGTTGGAGAAGAAGCTGGAGGAAGTAAAAGA 832
Query 837 AAAGAAGGAGAAAGAACAGTCTGGTTTGATC-ATACTCCAAGGAATAGAG 885
|||||||| |||||||| ||| |||||| || | ||||||| ||| |||
Sbjct 833 AAAGAAGGGGAAAGAACTGTCCGGTTTGCTCCAG-CTCCAAGAAATGGAG 881
> Ahg324310 jgi|Araly1|324310|fgenesh1_pm.C_scaffold_5001854
Length=1308
Score = 303 bits (164), Expect = 1e-81
Identities = 275/328 (84%), Gaps = 10/328 (3%)
Strand=Plus/Plus
Query 539 CTCAACAAGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAG 598
|||||||| ||||||||| ||| ||| | ||||||||||||||||||||||||||||| |
Sbjct 848 CTCAACAACTGAAGGAAACCATGGATATCAATGGGTTTCAAGTTCTTCCTTCACAGGT-G 906
Query 599 AA-TCTGTGAGACGTATTTTTAAAAAACATCCAGACATTGCAGTAGGATTCCAAGTAAAG 657
|| | |||||| ||||||||| ||||| | ||||||||||||||||||||||| | ||||
Sbjct 907 AAATTTGTGAGCCGTATTTTTGAAAAATACCCAGACATTGCAGTAGGATTCCATGCAAAG 966
Query 658 AACCAACATCTGAGGAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGA-TGTG 716
||||||||||| | || | ||| ||||||| |||| ||| | |||| ||||| | ||||
Sbjct 967 AACCAACATCTTAAGACAGCATGCATGAATGTCCTCCTCAGCCTAATCGAGAC-ACTGTG 1025
Query 717 CCAATCTC-TCCAGGAGCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCGT-TGACA 774
|| || | || |||||||||||||||||||| | ||||||| ||||| ||| | | |||
Sbjct 1026 TCAGTCACCTC-AGGAGCTCTCAAATGAAGATATGGTGGAAGCAGACAATGC-TCTAACA 1083
Query 775 TACT-TGAAAGATGCGGGATTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAA 833
|| | ||||||||||||| ||||||||||||||||| |||| ||||||||| | || ||
Sbjct 1084 TA-TGTGAAAGATGCGGGCTTTAAGGTGGATTGGTTGGAGATGAAGCTGGAGGAAGTAAA 1142
Query 834 AGAAAAGAAGGAGAAAGAACAGTCTGGT 861
||||||||||| | ||| ||| |||||
Sbjct 1143 AGAAAAGAAGGTGGTAGAGCAGACTGGT 1170
> Ahg924373 jgi|Araly1|924373|scaffold_105654.1
Length=1003
Score = 272 bits (147), Expect = 3e-72
Identities = 304/377 (81%), Gaps = 21/377 (6%)
Strand=Plus/Plus
Query 546 AGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 605
||| || ||||||| || ||||||||||||||||||||||||||||||| |||||||||
Sbjct 551 AGTAAAAGAAAGCA-TG--GTTAATGGGTTTCAAGTTCTTCCTTCACAGGAAGAATCTGT 607
Query 606 GAGACGTATTTTTAAAAAACATCCAGACATTGCAGTAGGA-TTCCAAGTAAAGAACCAAC 664
||||||||| ||| ||| |||||||||||||| |||| | |||| | |||||||||||
Sbjct 608 GAGACGTATATTTGAAAGACATCCAGACATTGTGGTAG-ACTTCCGTGCAAAGAACCAAC 666
Query 665 ATCTGAGGAAAACATTCATGAATTTCCTTG-TCAACGTAATTGAGACGATGTGCCAA-TC 722
| || |||| ||||| ||||||||| ||| ||| | | || |||||| ||||| || ||
Sbjct 667 AGCTCAGGACAACATGGATGAATTTC-TTGCTCAGCTTGATCGAGACGCTGTGC-AAGTC 724
Query 723 TCTCCAGGAGCTCTCAAATGAAGATCTTGTGGAAGTAGACATTGCGTTGACATACTTGAA 782
| |||||||| || ||||| ||||||||||| | |||||||||| ||||| |||||||
Sbjct 725 AATTCAGGAGCTTTCCAATGACGATCTTGTGGATGCAGACATTGCGCTGACACACTTGAA 784
Query 783 AGATGCGGGA-TTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAGAAAAGA 841
|| || | | |||||||| |||||| | || |||||||| || || || ||||||||||
Sbjct 785 AGCTGTGA-ACTTTAAGGTAGATTGGCTGGAAAAGAAGCTTGATCAAGTAAAAGAAAAGA 843
Query 842 AGGAGAAAGAACAGTCTGGTT-TGATC-ATACTCCAAGGAATAGA-GCAACA-ACTTCAT 897
| ||||||||| ||||| || || | | |||||||| || ||| | || | | ||| |
Sbjct 844 AAAAGAAAGAACTGTCTG-TTGTGGCCCA-ACTCCAAGAAACAGAAGAAA-ATA-TTC-T 898
Query 898 GAA-TTGATGCACAAGT 913
||| |||| ||| ||||
Sbjct 899 GAAATTGAAGCAAAAGT 915
> Ahg937123 jgi|Araly1|937123|scaffold_501314.1
Length=1048
Score = 167 bits (90), Expect = 2e-40
Identities = 230/297 (77%), Gaps = 12/297 (4%)
Strand=Plus/Plus
Query 553 GAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACGT 612
|||||||||||||| |||||||||||||||||||||||||||| ||||| |||| ||||
Sbjct 531 GAAAGCATTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCCGTGAAACGT 590
Query 613 ATTTTTAAAAAACATCCAGACATTGCAGTAG-GATTCCAAGTAAAGAACCAACATCTGAG 671
|| || ||| ||| |||||||| ||| ||| | ||| | |||| |||||||||| ||||
Sbjct 591 ATATTCGAAAGACACCCAGACATGGCATTAGAGTTTCGA-GTAATGAACCAACATATGAG 649
Query 672 GAAAACATTCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGCCAATCTCTCCAGGA 731
|| | || ||| ||| |||| ||||| |||| ||||| ||||||| || || | ||
Sbjct 650 GACATTATGCATAAATCTCCTCCTCAACATAATCGAGACTTTGTGCCAGTCACTGAAAGA 709
Query 732 GC-TCTCAAATGAAGATCTTGTGG--AAGTAGACATTGCGTTGACATACTTGAAAGATGC 788
| | || | | | || || | || ||| ||| | || | | |||| |||||||| |
Sbjct 710 -CATTTCCATTCATGAACT-G-GGCCAAGCAGAGAAAGCACTAAGATACCTGAAAGATTC 766
Query 789 GGGA-TTTAAGGTGGATTGGTTAGAGAAGAAGCTGGACCATGTGAAAG-AAAAGAAG 843
|| | ||||||||||||||||||||| | || ||||| | || |||| ||||||||
Sbjct 767 GG-ACTTTAAGGTGGATTGGTTAGAGCATAAACTGGAGGAAGT-AAAGGAAAAGAAG 821
> Ahg930958 jgi|Araly1|930958|scaffold_303415.1
Length=959
Score = 154 bits (83), Expect = 1e-36
Identities = 202/259 (78%), Gaps = 10/259 (4%)
Strand=Plus/Plus
Query 560 TTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACGTATTTTTA 619
||||||| |||||||||||||||||||||||||||| |||||||||| |||||| ||
Sbjct 416 TTGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGCGGAATCTGTGAAACGTATATTCG 475
Query 620 AAAAACATCCAGACATTGCAGTAGGATTCCAAGTAAAGAACCAACATCTGAGGAAAACAT 679
||||||| |||||||| ||| || ||||| || ||||||||||||| ||| || | |||
Sbjct 476 AAAAACACCCAGACATGGCACTAAAATTCCGAGCAAAGAACCAACATTTGAAGACATCAT 535
Query 680 TCATGAATTTCCTTGTCAACGTAATTGAGACGATGTGCCAATCTCTCCAGGAGCTCTCAA 739
||| ||| |||| ||| | |||| ||||| ||||||| || || || || || || |
Sbjct 536 GCATAAATGTCCTCCTCAGCTTAATCAAGACGTTGTGCCAGTCACTGCAAGACCTTTCCA 595
Query 740 ATGAAGATCTTGTGG--AAGTAGA-CATTGCGTTGACATA-CTTGAA-AGATGCGGGATT 794
||| || || | || ||| ||| || || | ||||| || ||| | || ||| ||
Sbjct 596 TTGATGACCT-G-GGCCAAGCAGAGCAA-GCACTAACATATCT-GAATA-ATTTGGGCTT 650
Query 795 TAAGGTGGATTGGTTAGAG 813
||||||||||||||| |||
Sbjct 651 TAAGGTGGATTGGTTGGAG 669
> Ahg913344 jgi|Araly1|913344|Al_scaffold_0001_3598
Length=828
Score = 124 bits (67), Expect = 1e-27
Identities = 122/147 (83%), Gaps = 10/147 (7%)
Strand=Plus/Plus
Query 546 AGTGAAGGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 605
||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 450 AGTAAATGAAAGCATCGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGT 509
Query 606 GA-GACGTATTTTTAAAAAACATCCAGACATTGCAGT-AGGATTCCAAGT--AAAGAACC 661
|| || || |||||| ||| || |||||||||||| | | ||||| || ||||||||
Sbjct 510 GAAGA-GTCTTTTTATAAAGCACCCAGACATTGCA-TCACAATTCC--GTCCAAAGAACC 565
Query 662 AACATCTGAGGAAAA-CATTCATGAAT 687
||| ||||| || | ||| | |||||
Sbjct 566 CACACCTGAG-AACAGCATACTTGAAT 591
> Ahg938811 jgi|Araly1|938811|scaffold_503002.1
Length=1099
Score = 110 bits (59), Expect = 3e-23
Identities = 111/135 (82%), Gaps = 8/135 (6%)
Strand=Plus/Plus
Query 562 GATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAGACGTATTTTTAAA 621
||||| ||||||||||||||||||||||||||||| | | |||||| ||||||||| ||
Sbjct 651 GATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTGGGTTTTGTGAGCCGTATTTTTGAA 710
Query 622 AAACATCCAGACATTGCAGT-AGGATTCCAAGTA-AA-GAACCAACATCTGAGGAAAA-C 677
||||| ||||| | |||| | || || || ||| || ||||||| ||||||| || | |
Sbjct 711 AAACACCCAGAGACTGCA-TCAGAATGCC--GTACAAAGAACCAAGATCTGAG-AACATC 766
Query 678 ATTCATGAATTTCCT 692
|| ||||||| ||||
Sbjct 767 ATACATGAATGTCCT 781
> Ahg905866 jgi|Araly1|905866|Al_scaffold_0003_2994
Length=891
Score = 93.5 bits (50), Expect = 3e-18
Identities = 77/89 (87%), Gaps = 6/89 (7%)
Strand=Plus/Plus
Query 552 GGAAAGCATTGATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGA-GAC 610
||||| | | ||||| |||||||||||||||||||||||||||||||||||||||| | |
Sbjct 432 GGAAACCGTAGATGTCAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGAAG-C 490
Query 611 GTATT-TTTAAAAAACATCCA-GACATTG 637
|| || ||| ||||||| ||| || ||||
Sbjct 491 GT-TTGTTTGAAAAACA-CCAAGATATTG 517
> Ahg905868 jgi|Araly1|905868|Al_scaffold_0003_2996
Length=882
Score = 89.8 bits (48), Expect = 3e-17
Identities = 230/315 (73%), Gaps = 24/315 (8%)
Strand=Plus/Plus
Query 562 GATGTTAATGGGTTTCAAGTTCTTCCTTCACAGGTAGAATCTGTGA-GACGTATT-TTTA 619
||||| ||||| ||||||||||||||||||||||||||||| |||| | | | || |||
Sbjct 460 GATGTCAATGGCTTTCAAGTTCTTCCTTCACAGGTAGAATCAGTGAAG-CTT-TTGTTTG 517
Query 620 AAAAACATCCA-GACATTGCAGT-AGGATTCCAAGTAAAGAA-CCAACATCTGAGGAAAA 676
||| || ||| || ||||| | | ||| | |||| || ||| || ||| ||
Sbjct 518 AAAGTCA-CCAAGATTTTGCA-TCAAAATTTCGTCTAAATAATCCAT-ATATGAAGACGG 574
Query 677 CATTCATGAAT-TTC-CTTGTCAACGTAATTGAGACGATGTGCCAATCTC-TCCAGGAGC 733
||| ||||||| ||| |||| | | ||| | ||| | |||| ||| | || || | |
Sbjct 575 CATACATGAATGTTCTCTTG--AGCTTAACCCAAACGCTATGCCGATCGCCTCAAGAA-C 631
Query 734 TCTCAAATGAAGATCT-TGTGGAAGTAGACATTGCGTTGACATACTTGAAAGATGC-GGG 791
|||| ||||| | ||| | || | | | | ||| || |||| |||| ||| || |||
Sbjct 632 TCTCCAATGATGGTCTCTTTG-ATGCGGGCGCTGCACTGTCATATTTGAGAGAAGCAGGG 690
Query 792 ATTTAAGGTGGATTGGTTAGAGAAGAAGCT-GGACCATGTGAAAG-AAAAGAAGGAGAAA 849
|||||| |||||||||| |||||||| || || | || |||| |||||||| |||||
Sbjct 691 -TTTAAGTTGGATTGGTTGGAGAAGAAACTTGGTGAA-GT-AAAGGAAAAGAAGAAGAAA 747
Query 850 GAACAGTCTGGTTTG 864
||| || || |||||
Sbjct 748 GAAGAGGCTTGTTTG 762
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36331139901
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5