BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G58510.1
Length=2348
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486301 jgi|Araly1|486301|fgenesh2_kg.5__2293__AT3G58510.1 3755 0.0
Ahg483345 jgi|Araly1|483345|fgenesh2_kg.4__2405__AT2G42520.1 1679 0.0
Ahg486308 jgi|Araly1|486308|fgenesh2_kg.5__2300__AT3G58570.1 1258 0.0
> Ahg486301 jgi|Araly1|486301|fgenesh2_kg.5__2293__AT3G58510.1
Length=2310
Score = 3755 bits (2033), Expect = 0.0
Identities = 2230/2323 (96%), Gaps = 22/2323 (1%)
Strand=Plus/Plus
Query 34 TAACATGTCTATTTTATCGCGTTGTGTCCGATCCAGAAGGTTCTCTATTTTTCGTGGATA 93
||||||||||||||||||||||||||||||||||| ||| |||| ||||||| | |||||
Sbjct 2 TAACATGTCTATTTTATCGCGTTGTGTCCGATCCAAAAGTTTCTTTATTTTT-GCGGATA 60
Query 94 AGAA-GATAAAGTTATTGTTTATTGATAAGTTTTCTGCTGGGAAGTTGCAACTTTTTCTA 152
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGAAGGATAAAGTTATCGTTTATTGATAAGTTTTCTGCTGGGAAGTTGCAACTTTTTCTA 120
Query 153 GATTTAGGACGTTACAAATTTCAATCATGAGTGCATCATGGGCAGATGTGGCTGATTCAG 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GATTTAGGACGTTACAAATTTCAATCATGAGTGCATCATGGGCAGATGTGGCTGATTCAG 180
Query 213 AGAAGGCCGTTTCTCAGTCAAAGCCTCCTTATGTTCCCCCACACCTACGGAACAGGCCAT 272
||||||||| |||| || ||||| || |||| ||||||||||||||||||||||||||||
Sbjct 181 AGAAGGCCGGTTCTAAGCCAAAGACTTCTTACGTTCCCCCACACCTACGGAACAGGCCAT 240
Query 273 CAGAGCCTGTTGCTGCTCCTTTGCCACAAAATGATCATGCAGGGTATGGTGGTCAACCAG 332
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CAGAGCCTGCTGCTGCTCCTTTGCCACAAAATGATCATGCAGGGTATGGTGGTCAACCAG 300
Query 333 CTGGGTCTCGTTGGGCTCCTCCTAGCAGTGGGGGTGGTGGTGCCAGCGGCGGTGGCTATA 392
|||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||
Sbjct 301 CTGGGTCTCGATGGGCTCCTCCTAGCAGTGGGGTTGGTGGTGGCAGCAGCGGTGGCTATA 360
Query 393 GGAATGATGGAGGGCGCACTGGCTAtggttatggtgctggaggaggaggtggtggtggtg 452
||||||||||||||||| |||||||||||||| | | |||||||||| || |||||||
Sbjct 361 GGAATGATGGAGGGCGCCCTGGCTATGGTTAT-G-G-TGGAGGAGGA---GGAGGTGGTG 414
Query 453 gtggctggaacaacagaagtggagggtgggaCCGTAGGGAACGTGAAGTAAACCCATTTG 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 415 GTGGCTGGAACAACAGAAGTGGAGGGTGGGACCGTAGGGAACGTGAAGTAAACCCATTTG 474
Query 513 GAGATGATGCTGAGTTAGAACCGGTCTTTACAGAGCAGGAGAATACTGGCATTAATTTTG 572
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 475 GAGATGATGCTGAGTTAGAACCGGTCTTTACGGAGCAGGAGAATACAGGCATTAATTTTG 534
Query 573 ATGCCTATGAAGATATTCCAGTTGAGACCAGTGGGGGAGACGTGCCCCCTCCTGTTAACA 632
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 535 ATGCCTATGAAGATATTCCAGTTGAGACCAGTGGGGGAGACGTGCCTCCTCCTGTTAACA 594
Query 633 CATTTGCTGACATAGATCTTGGGGATGCATTAAATCTGAACATCCGGAGGTGCAAGTATG 692
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 595 CATTTGCAGACATAGACCTTGGGGATGCATTAAATCTGAACATCCGGAGGTGCAAGTACG 654
Query 693 TGAGGCCAACACCGGTACAGCGTCATGCTATTCCAATACTGCTTGCAGAGAGAGATTTGA 752
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 655 TGAGGCCAACACCGGTACAGCGTCATGCTATTCCAATACTGCTTGCAGAGAGGGATTTGA 714
Query 753 TGGCCTGTGCCCAGACTGGGTCTGGGAAGACTGCTGCTTTTTGCTTTCCAATAATTAGTG 812
|||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 715 TGGCCTGTGCACAGACAGGGTCTGGGAAGACGGCTGCTTTTTGCTTTCCAATAATTAGTG 774
Query 813 GAATCATGAAAGATCAGCATGTAGAAAGACCCCGTGGTTCACGGGCGGTTTACCCTTTTG 872
||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 775 GAATCATGAAAGATCTGCATGTACAGAGACCCCGTGGTTCACGGGCGGTTTACCCTTTTG 834
Query 873 CAGTCATCCTCTCACCAACAAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAAT 932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 CAGTCATCCTCTCACCAACAAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAAT 894
Query 933 TCTCCTACCAAACTGGTGTGAAGGTTGTTGTTGCTTATGGAGGAACACCCATTCACCAGC 992
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 895 TCTCCTACCAAACTGGTGTGAAGGTTGTTGTTGCTTATGGAGGAACACCTATTCACCAGC 954
Query 993 AGCTCAGGGAACTCGAGAGGGGATGT-GATATCCTTGTGGCAACTCCTGGCCGGTTAAAT 1051
|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 955 AGCTCAGGGAACTCGAGAGGGGC-GTTGATATCCTTGTGGCAACTCCTGGCCGGTTAAAT 1013
Query 1052 GATTTGCTTGAAAGAGCTAGAGTCTCAATGCAGATGATTAGGTTTTTAGCTCTAGATGAG 1111
|||||||| || |||||||||||||||||| ||||||||| ||||||||||| ||||||
Sbjct 1014 GATTTGCTAGAGAGAGCTAGAGTCTCAATGGAGATGATTAAATTTTTAGCTCTTGATGAG 1073
Query 1112 GCAGACAGGATGCTGGACATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAGCAGATG 1171
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1074 GCAGACAGGATGCTGGACATGGGTTTTGAGCCACAAATTAGAAAGATTGTTGAACAGATG 1133
Query 1172 GACATGCCTCCACGTGGGGTGAGACAGACAATGCTGTTCAGTGCTACATTTCCAAGTCAG 1231
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 1134 GACATGCCTCCACGTGGGGTGAGACAGACAATGTTGTTCAGTGCTACATTTCCAAGGGAG 1193
Query 1232 ATTCAGAGACTTGCAGCTGATTTCATGTCAAACTATATATTTTTGGCTGTGGGAAGAGTT 1291
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1194 ATCCAGAGACTTGCAGCTGATTTCATGTCAAACTATATATTTTTGGCTGTGGGAAGAGTT 1253
Query 1292 GGTTCAAGCACTGATTTAATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGA 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 GGTTCAAGCACTGATTTAATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGA 1313
Query 1352 AGCCATCTCATGGACCTGCTTCACGCGCAAAGAGAGACCCAAGACAAGCAATCATTGACA 1411
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1314 AGCCATCTCATGGACCTGCTTCATGCGCAGAGAGAGACCCAAGACAAGCAATCATTGACA 1373
Query 1412 TTAGTTTTTGTGGAGACAAAGAGGGGAGCTGATACTTTGGAAAATTGGCTGTGCATGAAT 1471
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 TTGGTTTTTGTGGAGACAAAGAGGGGAGCTGATACTTTGGAAAATTGGCTGTGCATGAAT 1433
Query 1472 GAGTTTCCAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTG 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 GAGTTTCCAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTG 1493
Query 1532 AGGTCCTTCAAAACTGGGAGGACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGT 1591
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1494 AGGTCCTTCAAAACTGGGAGAACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGT 1553
Query 1592 CTTGACATTCCCCACGTGGCTCATGTTGTAAACTTCGATCTACCAAATGACATTGATGAC 1651
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1554 CTTGACATTCCCCACGTGGCTCATGTTGTAAACTTTGATCTACCAAATGACATCGATGAC 1613
Query 1652 TATGTCCACCGTATCGGACGAACAGGACGTGCAGGCAAATCTGGAATAGCAACTGCCTTC 1711
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1614 TATGTCCACCGTATCGGACGAACAGGACGTGCCGGCAAATCGGGAATAGCAACTGCCTTC 1673
Query 1712 TTCAACGAGAACAATGCACAACTGGCTAGGTCGCTTGCTGAGCTAATGCAAGAAGCCAAT 1771
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1674 TTCAACGAGAACAATGCACAAATGGCTAGGTCGCTTGCTGAGCTGATGCAAGAAGCCAAT 1733
Query 1772 CAAGAGGTCCCCGAGTGGCTCACACGATATGCTTCACGTGCTTCATTTGGTGGTGGTAAG 1831
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1734 CAAGAGGTGCCCGAGTGGCTCACACGATACGCTTCACGTGCTTCATTTGGTGGTGGTAAG 1793
Query 1832 AAACGGTCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACAGTAga 1891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 AAACGGTCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACAGTAGA 1853
Query 1892 ggaggaggcggcggcggcggaggaggcggcagtgattactatggcggaggaggcTATGGT 1951
||||| ||| || || ||| || |||| ||||||||||||||||||||||||||||
Sbjct 1854 GGAGG---CGGTGGAGG---AGGCGGTGGCAATGATTACTATGGCGGAGGAGGCTATGGT 1907
Query 1952 GGTGGTGGATACGGTGGTGCTCCAAGCGGTGGGTATGGTGCTGGAGTGACCAGTGCTTGG 2011
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1908 GGTGGTGGATATGGTGGTGCTCCAAGCGGTGGGTATGGTGCTGGAGTGACCAGTGCTTGG 1967
Query 2012 GATTAGCCAATTAGGCTCCCCAATTTTTCCTCTTTTTAACCTGACTATTTATTTCTTCTC 2071
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1968 GATTAGCCAATTAGGCTCCCCAATTTTTCCTCTTTTTAACATGACTATTTATTTCTTCTC 2027
Query 2072 TTCTACATTCCCAAGAGAGCACGTGTATTTGCCCCCACCTTTGAGATCTCTCATTCAAGA 2131
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 2028 TTCTACATTCCCAAGAGAGTACATGTATTTGCCCCCACCTTTGAGATCTCTCATTCAAGA 2087
Query 2132 GATGGATTTAACTAATCTTGCTATTAGGTGGATCTCTCTGTTTTTTCAGGCTATTTTT-- 2189
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2088 GATGGATTTAACTAATCTTGCTATTAGGTGAATCTCTCTGTTTTTTCAGGCTATTTTTTT 2147
Query 2190 -AGGATTTGTCCTAAAAGATAGACAGTAGTTTTT---CCGATTTTGATCTTGTTCTTGGT 2245
||||||| ||||||||||||| ||||||||||| |||||||||||| ||| ||||||
Sbjct 2148 TAGGATTTTTCCTAAAAGATAGGCAGTAGTTTTTTTTCCGATTTTGATCATGTGCTTGGT 2207
Query 2246 TTCTTCTAACAATTTCATTTGTTAGTTTGAAATCCAATTTGTCTTTTTGTTTCCCTTTGT 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2208 TTCTTCTAACAATTTCATTTGTTAGTTTGAAATCCAATTTGTCTTTTTGTTTCCCTTTGT 2267
Query 2306 TGTTGACAATCTTTCTTGGTGAAATACAATCTCTCTTTATATC 2348
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 2268 TGTTGACAATCTTTCTTGGTGAAATACAATCTCTCTTTATATC 2310
> Ahg483345 jgi|Araly1|483345|fgenesh2_kg.4__2405__AT2G42520.1
Length=2155
Score = 1679 bits (909), Expect = 0.0
Identities = 1487/1760 (84%), Gaps = 64/1760 (4%)
Strand=Plus/Plus
Query 236 CCTCCTTATGTTCCCCCACACCTACGGAACA-G---GCCA--TCAGAGCCTGTTGCTGCT 289
||| |||||||||| ||||| ||| |||||| | |||| || ||||||| | ||||
Sbjct 197 CCTGCTTATGTTCCTCCACATCTAAGGAACAGGCCAGCCACTTCTGAGCCTG-T--TGCT 253
Query 290 CCTTTGCCA-CAAAATGATCATGCAGGGTATGGTGGTCAACCAGCTGGGTCTCGTTGGGC 348
||||| ||| | ||||||| || ||| | |||||||| ||| |||| ||||| |||||
Sbjct 254 CCTTTACCAGC-TAATGATCGTGTAGGCTTTGGTGGTCCACCTTCTGGCTCTCGATGGGC 312
Query 349 TCCTCCTAGCAGTGGGGGTGGTGGTGCCAGCGGCGGTGGCTATAGGAATGATGGAGGGCG 408
|||| | | || | ||| ||||| || ||||| |||||| ||||| ||| ||
Sbjct 313 TCCTGGT-G--GTAGTAGTGTTGGTG---TTGGTGGTGGTTATAGGGCTGATGCAGGTCG 366
Query 409 CACTGGCTAtggttatgg-tgctggaggaggaggtggtggtggtggtggctggaacaaca 467
| |||||| ||| ||||| | |||| ||| || || ||||||||| ||||||||||
Sbjct 367 CCCTGGCTCTGGCTATGGCT-CTGGTGGACGA---GGAGGTGGTGGT---TGGAACAACA 419
Query 468 gaagtggagggtgggaCCGTAGGGAACGTGAAGTAAACCCATTTG--GA-GATGATGCTG 524
|||||||||| ||||||||||||||||||||||||||||| |||| | |||||| | |
Sbjct 420 GAAGTGGAGGCTGGGACCGTAGGGAACGTGAAGTAAACCCCTTTGATAATGATGATTCCG 479
Query 525 AGTTAGAACCGGTCTTTACAGAGCAGGAGAATACTGGCATTAATTTTGATGCCTATGAAG 584
| |||||| | |||||| |||||||| ||||| | |||||||||||| ||||||||||
Sbjct 480 AACCAGAACCAGCCTTTACTGAGCAGGATAATACCGTCATTAATTTTGACGCCTATGAAG 539
Query 585 ATATTCCAGTTGAGACCAGTGGGGGA-GACGTGCCCCCTCCTGTTAACACATTTGCTGAC 643
|||||||| ||||||||||| ||||| | ||||| ||||||||||||||||| || ||
Sbjct 540 ATATTCCAATTGAGACCAGT-GGGGATAATGTGCCTCCTCCTGTTAACACATTCGCAGAG 598
Query 644 ATAGATCTTGGGGATGCATTAAATCTGAACATCCGGAGGTGCAAGTATGTGAGGCCAACA 703
|||||||| ||||| || || ||||| || ||||| || ||||| ||||| | |||||||
Sbjct 599 ATAGATCTCGGGGAGGCCTTGAATCTAAATATCCGTAGATGCAAATATGTTAAGCCAACA 658
Query 704 CCGGTACAGCGTCATGCTATTCCAATACTGCTTGCAGAGAGAGATTTGATGGCCTGTGCC 763
|| |||||||||||||| || || ||| |||||| || ||| |||||||||||||||||
Sbjct 659 CCTGTACAGCGTCATGCGATCCCGATATTGCTTGAAGGGAGGGATTTGATGGCCTGTGCT 718
Query 764 CAGACTGGGTCTGGGAAGACTGCTGCTTTTTGCTTTCCAATAATTAGTGGAATCATGAAA 823
||||| || ||||||||||| |||||||||||||||||||| |||||||| || ||||||
Sbjct 719 CAGACAGGCTCTGGGAAGACAGCTGCTTTTTGCTTTCCAATTATTAGTGGGATAATGAAA 778
Query 824 GATCAGCATGTAGAAAGACCCCGTGGTTCACGGGCGGTTTACCCTTTTGCAGTCATCCTC 883
|||||||||||| | ||||||||||||||||| | || |||||| ||||||| || |||
Sbjct 779 GATCAGCATGTACAGAGACCCCGTGGTTCACGAACAGTCTACCCTCTTGCAGTTATTCTC 838
Query 884 TCACCAACAAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAATTCTCCTACCAA 943
||||||||||| || |||||| | |||||||||||||| || ||||| ||||||||||||
Sbjct 839 TCACCAACAAGAGAGTTGGCAAGTCAGATACATGATGAGGCTAAAAAGTTCTCCTACCAA 898
Query 944 ACTGGTGTGAAGGTTGTTGTTGCTTATGGAGGAACACCCATTCACCAGCAGCTCAGGGAA 1003
|||||||||||||| |||||||| |||||||||||||| ||| ||||||||||| |||||
Sbjct 899 ACTGGTGTGAAGGTGGTTGTTGCATATGGAGGAACACCTATTAACCAGCAGCTCCGGGAA 958
Query 1004 CTCGAGAGGGGATGT-GATATCCTTGTGGCAACTCCTGGCCGGTTAAATGATTTGCTTGA 1062
|| ||||||||| || ||||| ||||||||||||||||| || |||||||||||||| ||
Sbjct 959 CTTGAGAGGGGA-GTCGATATTCTTGTGGCAACTCCTGGTCGATTAAATGATTTGCTCGA 1017
Query 1063 AAGAGCTAGAGTCTCAATGCAGATGATTAGGTTTTTAGCTCTAGATGAGGCAGACAGGAT 1122
|||||||||||||| |||||||||||||| ||||||||||| |||||||| || || ||
Sbjct 1018 GAGAGCTAGAGTCTCTATGCAGATGATTAGATTTTTAGCTCTTGATGAGGCCGATAGAAT 1077
Query 1123 GCTGGACATGGGTTTTGAGCCACAGATTAGAAAGATTGTTGAGCAGATGGACATGCCTCC 1182
||| |||||||||||||| ||||| |||||||||||||| || || ||||||||||||||
Sbjct 1078 GCTTGACATGGGTTTTGAACCACAAATTAGAAAGATTGTCGAACAAATGGACATGCCTCC 1137
Query 1183 ACGTGGGGTGAGACAGACAATGCTGTTCAGTGCTACATTTCCAAGTCAGATTCAGAGACT 1242
|||||| || ||||||||| || |||| |||||||| ||||| || | |||||||||||
Sbjct 1138 ACGTGGAGTTAGACAGACACTGTTGTTTAGTGCTACTTTTCCCAGAGAAATTCAGAGACT 1197
Query 1243 TGCAGCTGATTTCAT-GTCAAACTATATATTTTTGGCTGTGGGAAGAGTTGGTTCAAGCA 1301
|||||||| ||| | | |||| |||||||||||||||||||| ||||| |||||||| |
Sbjct 1198 GGCAGCTGACTTCCTAG-CAAATTATATATTTTTGGCTGTGGGTAGAGTGGGTTCAAGTA 1256
Query 1302 CTGATTTAATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGAAGCCATCTCA 1361
| ||||||||| |||||||||||||||||||| || |||||||| ||||| |||||||
Sbjct 1257 CCGATTTAATTGTCCAAAGGGTTGAGTTTGTCCTTGACTCTGACAAAAGAAGTCATCTCA 1316
Query 1362 TGGACCTGCTTCACGCGCA-A-AGAG-A--G-ACCCAAGACAAGCAATCATTGACATTAG 1415
|||||||||||||||| || | |||| | | | ||||| ||||||| | |||| ||||
Sbjct 1317 TGGACCTGCTTCACGCTCAGAGAGAGAATGGCATCCAAGGCAAGCAAGCCCTGACCTTAG 1376
Query 1416 TTTTTGTGGAGACAAAGAGGGGAGCTGA-TACTTTGGAAAATTGGCTGTGCATGAATGAG 1474
|||||||||||||||||||||||||||| | |||||||||||||| ||||||| |||| |
Sbjct 1377 TTTTTGTGGAGACAAAGAGGGGAGCTGACT-CTTTGGAAAATTGGTTGTGCATCAATGGG 1435
Query 1475 TTTCCAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTG-AG 1533
|||||||||||||||||||| || || |||||||| ||||||||||||||||||||| |
Sbjct 1436 TTTCCAGCAACCTCCATTCACGGTGACAGAACACAGCAGGAAAGAGAAGTGGCACTGAAA 1495
Query 1534 GTCCTTCAAAACTGGGAGGACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGTCT 1593
| ||||||| | |||||| ||||| ||||||||||||||||| || ||||||||||| ||
Sbjct 1496 G-CCTTCAAGAGTGGGAGAACACCGATTTTGGTTGCAACAGATGTAGCAGCACGTGGCCT 1554
Query 1594 TGACATTCCCCACGTGGCTCATGTTGTAAACTTCGATCTACCAAATGACATTGATGACTA 1653
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1555 TGACATTCCCCACGTGGCTCATGTGGTCAACTTCGATCTACCAAATGACATTGATGACTA 1614
Query 1654 TGTCCACCGTATCGGACGAACAGGACGTGCAGGCAAATCTGGAATAGCAACTGCCTTCTT 1713
|||||||||||| ||||||||||||||||| |||||||| ||| |||||||||| |||||
Sbjct 1615 TGTCCACCGTATTGGACGAACAGGACGTGCTGGCAAATCAGGACTAGCAACTGCTTTCTT 1674
Query 1714 CAACGA-GAACAATGCA-CAACTGGCTAGG-TCGCTTGCTGAGCTAATGCAAGAAGCCAA 1770
|||||| | ||| | || ||||| || | ||| |||||||| ||||||||||| ||
Sbjct 1675 CAACGATGG-CAACACCTCA-CTGGCCAGACT-GCTCGCTGAGCTGATGCAAGAAGCTAA 1731
Query 1771 TCAAGAGGTCCCCGAGTGGCTCACACGATATGCTTCACG-TGCTTCATTTGGTGGTGGTA 1829
|| || ||||| | |||||||||||| ||||| ||||| | |||| |||||||||||||
Sbjct 1732 CCAGGAAGTCCCTGCGTGGCTCACACGGTATGCATCACGGT-CTTCTTTTGGTGGTGGTA 1790
Query 1830 AGAAACGG---TCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACA 1886
|||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||| |
Sbjct 1791 AGAACCGGCGGTCTGGTGGTCGGTTTGGTGGCCGTGACTTTAGAAGGGAAGGGTCTTTCG 1850
Query 1887 GTAgaggaggaggcggcggcggcgga---ggaggcggcagtgattactatgg---cggag 1940
|||||||||| || || || || ||| |||||||| || || |||||| |||||
Sbjct 1851 GTAGAGGAGGTGGTGGAGGAGGAGGATATGGAGGCGG-AG-GAGG-CTATGGTGGCGGAG 1907
Query 1941 gaggcTATGGTGGTGGTGGA 1960
|||| |||||||| || |||
Sbjct 1908 GAGGATATGGTGGCGGAGGA 1927
> Ahg486308 jgi|Araly1|486308|fgenesh2_kg.5__2300__AT3G58570.1
Length=2309
Score = 1258 bits (681), Expect = 0.0
Identities = 1220/1474 (83%), Gaps = 61/1474 (4%)
Strand=Plus/Plus
Query 438 gaggtggtggtggtggtggctggaacaacagaagtggagggtgggaCCGTAGGGA-ACGT 496
|||| |||| ||| || || ||||| | |||||||||||| |||||||||||||| || |
Sbjct 435 GAGGAGGTGTTGGGGGCGGTTGGAATACCAGAAGTGGAGGTTGGGACCGTAGGGATAC-T 493
Query 497 G-AAGTAAACCCATTTGG-AGATGATGCTG-AGT-TAGAACCGG-TCTTTACAGAGCAGG 551
| || | ||||| ||||| | |||||| | | | ||| |||| | || || |||||||
Sbjct 494 GAAACT-AACCCGTTTGGTA-ATGATG--GAAATGCAGACCCGGTTGTTAAC-GAGCAGG 548
Query 552 AGAATACTGGCATTAATTTTGATGCCTATGAAGATATT-CCAGTTGAGACCAGTGGGGGA 610
| || || | |||||| ||||| ||||||||||||||| ||| | ||||| ||| |||||
Sbjct 549 AAAACACAGTCATTAACTTTGAAGCCTATGAAGATATTCCCA-TCGAGACAAGT-GGGGA 606
Query 611 -GACGTGCC-CCCTCCTGTTAACACATTTGCTGACATAGATCTTGGGGATGCAT-TAAAT 667
| ||||| ||| |||||||| |||||||| || ||||| || || || || | | |||
Sbjct 607 TAATGTGCCACCC-CCTGTTAATACATTTGCAGAGATAGACCTCGGAGAAGC-TCTGAAT 664
Query 668 CTGAACATCCGGAGGTGCAAGTATGTGAGGCCAACACCGGTACAGCGTCATGCTATTCCA 727
|| || |||| ||||||||| || |||| |||||| || || |||||| |||| |||||
Sbjct 665 CTAAATATCCAGAGGTGCAAATACGTGAAGCCAACTCCTGTGCAGCGTAATGCAATTCCC 724
Query 728 ATACT-GCTTG-CAGAGAGAGATTTGATGGCCTGTGCCCAGACTGGGTCTGGGAAGACTG 785
||| | || || | || || ||||||||||| ||||| ||||| |||||||||||||| |
Sbjct 725 ATATTGGC-TGCCGGA-AGGGATTTGATGGCTTGTGCTCAGACAGGGTCTGGGAAGACAG 782
Query 786 CTGCTTTTTGCTTTCCAATAATTAGTGGAATCATGAAAGATCAGCATGTAGAAAGACC-C 844
|||| ||||| ||||| || |||||||| || ||||| ||||||||| |||| ||||| |
Sbjct 783 CTGCCTTTTGTTTTCCGATTATTAGTGGGATTATGAAGGATCAGCATATAGAGAGACCAC 842
Query 845 -CGTG-GTTCACGGGCG-GTTTACCCTTTTGCAGTCATCCTCTCACCAACAAGGGAATTG 901
|| | ||| |||| | || || ||| |||| ||||| ||||||||||||||||| |||
Sbjct 843 GCG-GAGTT--CGGG-GAGTCTATCCTCTTGCTGTCATTCTCTCACCAACAAGGGAGTTG 898
Query 902 GCATGCCAGATACATGATGAAGCCAAAAAATTCTCCTACCAAACTGGTGTGAAGGTTGTT 961
|| |||||||||||||||||||||| ||| |||||||| |||||||| ||||| |||||
Sbjct 899 GCTTGCCAGATACATGATGAAGCCAGAAAGTTCTCCTATCAAACTGGAGTGAAAGTTGTG 958
Query 962 GTTGCTTATGGAGGAACACCCATTC-ACCAGCAGCTCAGGGAACTCGAGAGGGGATG-TG 1019
|||||||| ||||||||| ||| || |||| ||| | ||||| || || || ||| | ||
Sbjct 959 GTTGCTTACGGAGGAACA-CCAGTCAACCAACAGATTAGGGAGCTTGAAAGAGGA-GTTG 1016
Query 1020 ATATCCTTGTGGCAACTCCTGGCCGGTTAAATGATTTGCTTGAAAGAGCTAGAGTCTCAA 1079
|||| ||||| ||||||||||| | ||||||||||||||||| |||| |||||| |||
Sbjct 1017 ATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTTGCTTGAGAGAGGTAGAGTTTCAT 1076
Query 1080 TGCAGATGATTAGGTTTTTAGCTCTAGATGAGGCAGACAGGATGCTGGACATGGGTTTTG 1139
| |||||| | | || || || || |||||||| ||||| |||||||||||||||||||
Sbjct 1077 TACAGATGGTAAAATTCTTGGCACTTGATGAGGCGGACAGAATGCTGGACATGGGTTTTG 1136
Query 1140 AGCCACAGATTAGAAAGATTGTTGAGCAGATGGACATGCCTCCACGTGGGGTGAGACAGA 1199
| ||||| || || ||||| ||| ||||||||||||||||||| | ||| || | ||||
Sbjct 1137 AACCACAAATCAGGAAGATCGTTCAGCAGATGGACATGCCTCCTCCTGGTGTCCGGCAGA 1196
Query 1200 CAATGCTGTTCAGTGCTACATTTCCAAGTCAGATTCAGAGACTTGCAGCTGA-TTTCATG 1258
| ||| ||||||||||||||||||| || |||| |||||||||||| |||| |||| |
Sbjct 1197 CGATGTTGTTCAGTGCTACATTTCCTAGGGAGATACAGAGACTTGCATCTGATTTTC-TT 1255
Query 1259 TCAAACTATATATTTTTGGCTG-TGGGAAGAGTTGGTTCAAGCACTGATTTAATTACCCA 1317
||||| || |||||| |||||| |||| ||||| |||||||| || ||||||||| |||
Sbjct 1256 TCAAATTACATATTTCTGGCTGTTGGG-AGAGTGGGTTCAAGTACGGATTTAATTGTCCA 1314
Query 1318 AAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCTGCTTCACGC 1377
||| || ||||||||||| || |||||||| ||||||||||| |||||||| ||||| ||
Sbjct 1315 AAGAGTAGAGTTTGTCCATGATTCTGACAAAAGAAGCCATCTAATGGACCTTCTTCATGC 1374
Query 1378 GCA-A-AGAG-A--G-ACCCAA-GACAAGCAATCATTGACAT-TAGTTTTTGTGGAGACA 1429
|| | ||| | | | |||| || |||||| | ||||| | |||||||||||||||||
Sbjct 1375 CCAGAGGGAGAACGGTAACCAAGGA-AAGCAAGCTTTGAC-TCTAGTTTTTGTGGAGACA 1432
Query 1430 AAGAGGGGAGCTGA-TACTTTGGAAAATTGGCTGTGCATGAATGAGTTT-CCAGCAACCT 1487
|||| ||||||||| | ||||||| |||||| ||||||| |||| |||| ||||||||
Sbjct 1433 AAGAAGGGAGCTGACT-CTTTGGAGAATTGGTTGTGCATCAATG-GTTTCCCAGCAACGA 1490
Query 1488 CCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTGAGGTCCTTCAAAACTG 1547
||||||| || ||||| |||||||||||||||||||||||||||| || ||||| |||
Sbjct 1491 CCATTCACGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACTGAGATCATTCAAGACT- 1549
Query 1548 GGA-GGACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGTCTTGACATTCCCCAC 1606
||| |||||||||||||||||||||| || |||||||||||||||||||||||||| ||
Sbjct 1550 GGACGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGGTCTTGACATTCCGCAT 1609
Query 1607 GTGGCTCATGTTGTAAACTTCGATCTACCAAATGACATTGATGACTATGTCCACCGTATC 1666
||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 1610 GTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGACTATGTCCACCGTATC 1669
Query 1667 GGACGAACAGGACGTGCAGGCAAATCTGGAATAGCAACTGCCTTCTTCAACGAGAACAAT 1726
||||||||||||||||||||||| || ||| |||||||||| |||||||| || |||||
Sbjct 1670 GGACGAACAGGACGTGCAGGCAATTCAGGACTAGCAACTGCTTTCTTCAATGACAACAAC 1729
Query 1727 GCA-CAACTGGCTAGGTCGCTTGCTGAGCTAATGCAAGAAGCCAATCAAGAGGTCCCCGA 1785
|| ||| |||| | | | || |||||||||||||||||||| || || |||||||| ||
Sbjct 1730 ACATCAA-TGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCAAACCAGGAGGTCCCTGA 1788
Query 1786 GTGGCTCACACGATATGCTTCACGTGCTTCATTTGGTGGTGGTAAGAAACGG---TCTGG 1842
||||| || ||||| || || |||||||||||||| ||||||||||| ||| |||||
Sbjct 1789 CTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAAGAACCGGCGGTCTGG 1848
Query 1843 TGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAA 1876
||| ||||||||||||||||||||||| || |||
Sbjct 1849 TGGACGGTTTGGTGGCCGTGACTTCAGGAGAGAA 1882
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88445548890
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5