BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT3G58570.1
Length=2341
Score E
Sequences producing significant alignments: (Bits) Value
Ahg486308 jgi|Araly1|486308|fgenesh2_kg.5__2300__AT3G58570.1 3795 0.0
Ahg483345 jgi|Araly1|483345|fgenesh2_kg.4__2405__AT2G42520.1 1384 0.0
Ahg486301 jgi|Araly1|486301|fgenesh2_kg.5__2293__AT3G58510.1 1312 0.0
> Ahg486308 jgi|Araly1|486308|fgenesh2_kg.5__2300__AT3G58570.1
Length=2309
Score = 3795 bits (2055), Expect = 0.0
Identities = 2249/2337 (96%), Gaps = 35/2337 (1%)
Strand=Plus/Plus
Query 4 TTTTCTCTTTTGCTCATTTCCCAGAAACCTTTGTTTCATTTGCTTCGTGTGCGATCGCGA 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TTTTCTCTTTTGCTCATTTCCCAGAAACCTTTGTTTCATTTGCTTCGTGTGCGATCGCGA 60
Query 64 GAACAAGGGAAAATTAGGGTTTATATCCTCAAGCTTTTTCGAACACCATTGATCGTTGAT 123
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 61 GAACAAGGGAAAATTAGGGTTTATATTCTCAAGCTTTTTCGAACACCATTGATCCTTGAT 120
Query 124 CTAAGATTTTTCTTCTAGTCGAGTTTCTTAAGGGGCTTTGATCAAACTCAAAATTGAAGA 183
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 121 CTAAGATTTTTCTTCTATTCGAGTTTCTTAAGGGGCTTTGATCAAACTCAAAATCGAAGA 180
Query 184 CCAATACTTTGAAGGATTCTGGTAAAGCTAAGCAACTATGAGTTCAAATTCATGGGCTGA 243
|||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 181 CCAAGACGTTGAAGGATTCTGGTAAAGCTAAGCAATTATGAGTTCAAATTCATGGGCTGA 240
Query 244 TGTTTCTGAATCAGAGAGGGCACCATCTGGTGGTGGTTGGGGTTATTCTCGTCCGTCTCG 303
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 241 TGTTTCTGAATCAGAGAGGGCACCATC---TGGTGCTTGGGGTTATTCTCGTCCGTCTCG 297
Query 304 AACCAACTATGTTCCTCCACATCTTAGGAGCCGTACACCATCTTCGGAGTTTGTTGCTCC 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 298 AACCAACTATGTTCCTCCACATCTTAGGAGCCGTACACCATCTTCGGAGTTTGTTGCTCC 357
Query 364 TTCACCTGGTAATAATGATCGTGGGGGATATGGTGGTGCAAATAGTGGTTATGGTGGTCG 423
||||||||| |||||||| | ||| || | | |||||||||||
Sbjct 358 TTCACCTGG---TAATGATC------G---TGG-GG-G-----A-----TATGGTGGTCG 393
Query 424 AGGCCAAGGTTATGGTGGTCGAGGTTCGGGCTATGGTGGTAGAGGAGGTCCTGTGGGCGG 483
||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||
Sbjct 394 AGGCCAAGGTTATGGTGGTCGAGGTTCTGGCTATGGTGGTAGAGGAGGTGTTGGGGGCGG 453
Query 484 TTGGAATGCCAGAAGTGGAGGTTGGGACCGTCGGGATACTGAAACTAACCCGTTTGGTAA 543
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 454 TTGGAATACCAGAAGTGGAGGTTGGGACCGTAGGGATACTGAAACTAACCCGTTTGGTAA 513
Query 544 TGATGGAAATGCAGACCCGGCTGTTAACGAGCAGGAAAACACTGTCATTAACTTTGAGGC 603
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||
Sbjct 514 TGATGGAAATGCAGACCCGGTTGTTAACGAGCAGGAAAACACAGTCATTAACTTTGAAGC 573
Query 604 CTATGAAGATATTCCCATCGAGACAAGTGGGGATAATGTGCCACCTCCTGTTAATACATT 663
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 574 CTATGAAGATATTCCCATCGAGACAAGTGGGGATAATGTGCCACCCCCTGTTAATACATT 633
Query 664 TGCAGAGATAGACCTCGGAGAAGCTCTCAATCTAAATATCCAGAGGTGCAAATACGTGAA 723
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 634 TGCAGAGATAGACCTCGGAGAAGCTCTGAATCTAAATATCCAGAGGTGCAAATACGTGAA 693
Query 724 GCCGACCCCTGTGCAGCGTAATGCAATTCCCATATTGGCTGCAGGAAGGGATTTGATGGC 783
||| || ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 694 GCCAACTCCTGTGCAGCGTAATGCAATTCCCATATTGGCTGCCGGAAGGGATTTGATGGC 753
Query 784 TTGTGCTCAGACAGGCTCTGGGAAGACAGCTGCCTTTTGTTTTCCGATTATTAGTGGGAT 843
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 TTGTGCTCAGACAGGGTCTGGGAAGACAGCTGCCTTTTGTTTTCCGATTATTAGTGGGAT 813
Query 844 TATGAAGGATCAGCATATAGAGAGACCACGTGGAGTTCGGGGAGTCTATCCTCTTGCTGT 903
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 814 TATGAAGGATCAGCATATAGAGAGACCACGCGGAGTTCGGGGAGTCTATCCTCTTGCTGT 873
Query 904 CATTCTCTCACCAACAAGGGAATTGGCTTGCCAGATACATGATGAAGCCAGAAAGTTCTC 963
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 874 CATTCTCTCACCAACAAGGGAGTTGGCTTGCCAGATACATGATGAAGCCAGAAAGTTCTC 933
Query 964 CTATCAAACTGGAGTGAAAGTTGTGGTTGCTTACGGAGGAACACCAGTCAACCAACAGAT 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 934 CTATCAAACTGGAGTGAAAGTTGTGGTTGCTTACGGAGGAACACCAGTCAACCAACAGAT 993
Query 1024 TAGGGAGCTTGAAAGAGGAGTTGATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTT 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 994 TAGGGAGCTTGAAAGAGGAGTTGATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTT 1053
Query 1084 GCTTGAGAGAGGTAGAGTCTCATTACAGATGGTAAGATTCTTGGCACTTGATGAGGCGGA 1143
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1054 GCTTGAGAGAGGTAGAGTTTCATTACAGATGGTAAAATTCTTGGCACTTGATGAGGCGGA 1113
Query 1144 CAGAATGCTGGACATGGGTTTTGAACCACAAATCAGGAAGATCGTTCAGCAGATGGACAT 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1114 CAGAATGCTGGACATGGGTTTTGAACCACAAATCAGGAAGATCGTTCAGCAGATGGACAT 1173
Query 1204 GCCTCCTCCTGGTGTCCGGCAGACAATGTTGTTCAGTGCTACATTTCCTAGGGAGATACA 1263
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1174 GCCTCCTCCTGGTGTCCGGCAGACGATGTTGTTCAGTGCTACATTTCCTAGGGAGATACA 1233
Query 1264 GAGACTTGCATCTGATTTTCTTTCAAATTACATATTTCTGGCTGTTGGAAGAGTGGGTTC 1323
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1234 GAGACTTGCATCTGATTTTCTTTCAAATTACATATTTCTGGCTGTTGGGAGAGTGGGTTC 1293
Query 1324 AAGTACGGATTTAATTGTCCAAAGAGTAGAGTTTGTTCATGATTCTGACAAAAGAAGCCA 1383
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1294 AAGTACGGATTTAATTGTCCAAAGAGTAGAGTTTGTCCATGATTCTGACAAAAGAAGCCA 1353
Query 1384 TCTAATGGACCTTCTTCATGCCCAGAGGGAGAATGGTAACCAAGGAAAGCAAGCTTTGAC 1443
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1354 TCTAATGGACCTTCTTCATGCCCAGAGGGAGAACGGTAACCAAGGAAAGCAAGCTTTGAC 1413
Query 1444 TCTAGTTTTTGTGGAGACAAAGAAGGGAGCTGACTCTTTGGAGAATTGGTTGTGCATCAA 1503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1414 TCTAGTTTTTGTGGAGACAAAGAAGGGAGCTGACTCTTTGGAGAATTGGTTGTGCATCAA 1473
Query 1504 TGGTTTCCCAGCAACGACCATTCATGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACT 1563
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1474 TGGTTTCCCAGCAACGACCATTCACGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACT 1533
Query 1564 GAGATCATTCAAGACTGGGCGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGG 1623
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1534 GAGATCATTCAAGACTGGACGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGG 1593
Query 1624 TCTTGACATTCCGCACGTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGA 1683
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1594 TCTTGACATTCCGCATGTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGA 1653
Query 1684 CTATGTCCACCGTATCGGACGAACAGGACGTGCAGGAAATTCAGGACTAGCAACTGCTTT 1743
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1654 CTATGTCCACCGTATCGGACGAACAGGACGTGCAGGCAATTCAGGACTAGCAACTGCTTT 1713
Query 1744 CTTCAATGACAACAACACAACAATGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCTAA 1803
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1714 CTTCAATGACAACAACACATCAATGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCAAA 1773
Query 1804 CCAGGAGGTCCCTGACTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAA 1863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 CCAGGAGGTCCCTGACTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAA 1833
Query 1864 GAACCGGCGGTCTGGTGGACGGTTTGGTGGTCGTGACTTCAGGAGAGAATCTTTTAGTCG 1923
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 1834 GAACCGGCGGTCTGGTGGACGGTTTGGTGGCCGTGACTTCAGGAGAGAATCTTTTAGCCG 1893
Query 1924 AGGCGGTGGTGGTGCTGACTACTATGGTGGAGGTGGTGGATATGGAGGCGTTCCTGGTGG 1983
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1894 AGGCGGTGGTGGTGCTGACTACTATGGTGGTGGTGGTGGGTATGGAGGCGTTCCTGGTGG 1953
Query 1984 TGGCTATGGAGCAATGCCTGGTGGGTACGGACCCGTACCAGGTGGTGGATATGGAAATGT 2043
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 1954 TGGCTATGGAGCAATGCCTGGTGGGTACGGCCCCGTACCAGGTGGTGGATATGGAACTGT 2013
Query 2044 TCCGGGTGGTGGTTATGCACCTTATGGTAGAGGTGGTGGTGCTTACTATGGT------CC 2097
||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2014 TCCTGGTGGTGGCTATGCACCTTATGGTAGAGGTGGTGGTGCTTACTATGGTGGAGGTCC 2073
Query 2098 TGGAGGATATGGAACCGTTCCTAACCAAGGGTATGGTCCTGGAGTGGCTAGTGCGTGGGA 2157
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2074 TGGAGGATATGGAACTGTTCCTAGCCAAGGGTATGGTCCTGGAGTGGCTAGTGCGTGGGA 2133
Query 2158 CTAAGCTTTAACTTCAATTCTTCAAGAACCGATTATGTTCTCTTTCTCTCTCACTTATCT 2217
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 2134 TTAAGCTTTAACTTCAATTCTTCAAGAACCGATTATGTTCTCT--CTCTCACACTTATCT 2191
Query 2218 CTATTGTTTATTATTAGGGAGCAGCCACAGATGTGTATGTTTGCTCTTTAAATGGTTATG 2277
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2192 CTATTGTTTATTATTAGGGAGCAGCCACCGATGTGTATGTTTGCTCTTTAAATGGTTATG 2251
Query 2278 TAGTAGACACGAATCGTCTCTTTGTTCAATGTGAAAAAAGAAAACCCCCTAGTAGAC 2334
|||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||
Sbjct 2252 TAGTAGACACGAATCGTCTCTTTGTTCACTGTGAAAAAAGAAAAACCCCTAGTCGAC 2308
> Ahg483345 jgi|Araly1|483345|fgenesh2_kg.4__2405__AT2G42520.1
Length=2155
Score = 1384 bits (749), Expect = 0.0
Identities = 1245/1481 (84%), Gaps = 48/1481 (3%)
Strand=Plus/Plus
Query 482 GGTTGGAATGCCAGAAGTGGAGGTTGGGACCGTCGGGATAC-TGAAACT-AACCCGTTTG 539
|||||||| |||||||||||| ||||||||| |||| || || || | ||||| ||||
Sbjct 407 GGTTGGAACAACAGAAGTGGAGGCTGGGACCGTAGGGA-ACGTG-AAGTAAACCCCTTTG 464
Query 540 GTAATGATGGAAAT--G---CAG-ACCCGGCTGTTAAC-GAGCAGGAAAACACTGTCATT 592
||||||| | | | | ||| ||| | || || || |||||||| || || ||||||
Sbjct 465 ATAATGAT-G-ATTCCGAACCAGAACCAGCCT-TT-ACTGAGCAGGATAATACCGTCATT 520
Query 593 AACTTTGAGGCCTATGAAGATATTCCCATCGAGACAAGTGGGGATAATGTGCCACCTCCT 652
|| ||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||||
Sbjct 521 AATTTTGACGCCTATGAAGATATTCCAATTGAGACCAGTGGGGATAATGTGCCTCCTCCT 580
Query 653 GTTAATACATTTGCAGAGATAGACCTCGGAGAAG-CTCTCAATCTAAATATCCAG-AGGT 710
||||| ||||| ||||||||||| ||||| || | || | ||||||||||||| | || |
Sbjct 581 GTTAACACATTCGCAGAGATAGATCTCGGGGAGGCCT-TGAATCTAAATATCC-GTAGAT 638
Query 711 GCAAATACGTGAAGCCGACCCCTGTGCAGCGTAATGCAATTCCC-ATATTGGC-TGCAGG 768
||||||| || ||||| || ||||| |||||| |||| | |||| ||||| || || |||
Sbjct 639 GCAAATATGTTAAGCCAACACCTGTACAGCGTCATGCGA-TCCCGATATT-GCTTGAAGG 696
Query 769 AAGGGATTTGATGGCTTGTGCTCAGACAGGCTCTGGGAAGACAGCTGCCTTTTGTTTTCC 828
|||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 697 GAGGGATTTGATGGCCTGTGCTCAGACAGGCTCTGGGAAGACAGCTGCTTTTTGCTTTCC 756
Query 829 GATTATTAGTGGGATTATGAAGGATCAGCATATAGAGAGACCACGTGGAGTTCGGGGA-- 886
|||||||||||||| ||||| ||||||||| || ||||||| ||||| ||| | |
Sbjct 757 AATTATTAGTGGGATAATGAAAGATCAGCATGTACAGAGACCCCGTGG--TTCACGAACA 814
Query 887 GTCTATCCTCTTGCTGTCATTCTCTCACCAACAAGGGAATTGGCTTGCCAGATACATGAT 946
||||| |||||||| || ||||||||||||||||| || ||||| | ||||||||||||
Sbjct 815 GTCTACCCTCTTGCAGTTATTCTCTCACCAACAAGAGAGTTGGCAAGTCAGATACATGAT 874
Query 947 GAAGCCAGAAAGTTCTCCTATCAAACTGGAGTGAAAGTTGTGGTTGCTTACGGAGGAACA 1006
|| || | |||||||||||| |||||||| ||||| || || ||||| || |||||||||
Sbjct 875 GAGGCTAAAAAGTTCTCCTACCAAACTGGTGTGAAGGTGGTTGTTGCATATGGAGGAACA 934
Query 1007 CC-AGTCAACCAACAGATTAGGGAGCTTGAAAGAGGAGTTGATATTCTTGTTGCAACTCC 1065
|| | | ||||| ||| | |||| ||||| || ||||| ||||||||||| ||||||||
Sbjct 935 CCTATT-AACCAGCAGCTCCGGGAACTTGAGAGGGGAGTCGATATTCTTGTGGCAACTCC 993
Query 1066 TGGGAGATTAAATGATTTGCTTGAGAGAGGTAGAGTCTC-ATTACAGATGGTAAGATTCT 1124
||| |||||||||||||||| ||||||| ||||||||| || |||||| | ||||| |
Sbjct 994 TGGTCGATTAAATGATTTGCTCGAGAGAGCTAGAGTCTCTATG-CAGATGATTAGATTTT 1052
Query 1125 TGGCACTTGATGAGGCGGACAGAATGCTGGACATGGGTTTTGAACCACAAATCAGGAAGA 1184
| || ||||||||||| || |||||||| ||||||||||||||||||||||| || ||||
Sbjct 1053 TAGCTCTTGATGAGGCCGATAGAATGCTTGACATGGGTTTTGAACCACAAATTAGAAAGA 1112
Query 1185 TCGTTC-AGCAGATGGACATGCCTCCTCCTGGTGTCCGGCAGACAATGTTGTTCAGTGCT 1243
| || | | || |||||||||||||| | ||| || | |||||| ||||||| ||||||
Sbjct 1113 TTGT-CGAACAAATGGACATGCCTCCACGTGGAGTTAGACAGACACTGTTGTTTAGTGCT 1171
Query 1244 ACATTTCCTAGGGAGATACAGAGACTTGCATCTGATTTTCTTTCAAATTACATATTTCTG 1303
|| ||||| || || || |||||||| ||| |||| || || ||||||| |||||| ||
Sbjct 1172 ACTTTTCCCAGAGAAATTCAGAGACTGGCAGCTGACTTCCTAGCAAATTATATATTTTTG 1231
Query 1304 GCTGTTGGAAGAGTGGGTTCAAGTACGGATTTAATTGTCCAAAGAGTAGAGTTTGTTCAT 1363
||||| || ||||||||||||||||| ||||||||||||||||| || |||||||| | |
Sbjct 1232 GCTGTGGGTAGAGTGGGTTCAAGTACCGATTTAATTGTCCAAAGGGTTGAGTTTGTCCTT 1291
Query 1364 GATTCTGACAAAAGAAGCCATCTAATGGACCTTCTTCATGCCCAGAGGGAGAATGGTAAC 1423
|| |||||||||||||| ||||| |||||||| ||||| || ||||| |||||||| | |
Sbjct 1292 GACTCTGACAAAAGAAGTCATCTCATGGACCTGCTTCACGCTCAGAGAGAGAATGGCATC 1351
Query 1424 CAAGGAAAGCAAGCTTTGACTCT-AGTTTTTGTGGAGACAAAGAAGGGAGCTGACTCTTT 1482
||||| |||||||| |||| || |||||||||||||||||||| |||||||||||||||
Sbjct 1352 CAAGGCAAGCAAGCCCTGAC-CTTAGTTTTTGTGGAGACAAAGAGGGGAGCTGACTCTTT 1410
Query 1483 GGAGAATTGGTTGTGCATCAATGG-TTTCCCAGCAACGACCATTCATGGTGATAGGTCAC 1541
||| |||||||||||||||||||| ||||| |||||| ||||||| ||||| || |||
Sbjct 1411 GGAAAATTGGTTGTGCATCAATGGGTTTCC-AGCAACCTCCATTCACGGTGACAGAACAC 1469
Query 1542 AACAGGAAAGAGAAGTGGCACTGAGATCATTCAAGACTGGGCGGACACCTATTTTGGTTG 1601
| |||||||||||||||||||||| | | ||||||| |||| | ||||| ||||||||||
Sbjct 1470 AGCAGGAAAGAGAAGTGGCACTGAAAGCCTTCAAGAGTGGGAGAACACCGATTTTGGTTG 1529
Query 1602 CAACCGATGTGGCAGCACGTGGTCTTGACATTCCGCACGTGGCTCATGTAGTGAACTTTG 1661
|||| ||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| |
Sbjct 1530 CAACAGATGTAGCAGCACGTGGCCTTGACATTCCCCACGTGGCTCATGTGGTCAACTTCG 1589
Query 1662 ATCTACCAAACGACATTGATGACTATGTCCACCGTATCGGACGAACAGGACGTGCAGG-A 1720
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || |
Sbjct 1590 ATCTACCAAATGACATTGATGACTATGTCCACCGTATTGGACGAACAGGACGTGCTGGCA 1649
Query 1721 AATTCAGGACTAGCAACTGCTTTCTTCAATGACAACAACACAACAATGGCCAAGCCA-CT 1779
||| ||||||||||||||||||||||||| || |||||| || |||||| | | ||
Sbjct 1650 AAT-CAGGACTAGCAACTGCTTTCTTCAACGATGGCAACACCTCACTGGCCA-GACTGCT 1707
Query 1780 GGCTGAGCTAATGCAAGAAGCTAACCAGGAGGTCCCTGAC-TGGCTGACTCGATACGCAT 1838
|||||||| |||||||||||||||||||| ||||||| | ||||| || || || ||||
Sbjct 1708 CGCTGAGCTGATGCAAGAAGCTAACCAGGAAGTCCCTG-CGTGGCTCACACGGTATGCAT 1766
Query 1839 CTCG-TGCTTCATTTGGAGGTGGTAAGAACCGGCGGTCTGGTGGACGGTTTGGTGGTCGT 1897
| || | |||| ||||| |||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1767 CACGGT-CTTCTTTTGGTGGTGGTAAGAACCGGCGGTCTGGTGGTCGGTTTGGTGGCCGT 1825
Query 1898 GACTTCAGGAGAGAA---TCTTTTAGTCGAGGCGGTGGTGG 1935
||||| || || ||| ||||| || |||| ||||||||
Sbjct 1826 GACTTTAGAAGGGAAGGGTCTTTCGGTAGAGGAGGTGGTGG 1866
> Ahg486301 jgi|Araly1|486301|fgenesh2_kg.5__2293__AT3G58510.1
Length=2310
Score = 1312 bits (710), Expect = 0.0
Identities = 1255/1511 (83%), Gaps = 66/1511 (4%)
Strand=Plus/Plus
Query 455 TATGGTGGTA-GAGGAGGTCCT-GTGGGCGGTTGGAATGCCAGAAGTGGAGGTTGGGACC 512
|||||||| | ||||||| | || || || ||||| |||||||||||| |||||||
Sbjct 390 TATGGTGG-AGGAGGAGGAGGTGGT-GGTGGCTGGAACAACAGAAGTGGAGGGTGGGACC 447
Query 513 GTCGGGATAC-TGAAACT-AACCCGTTTGGTA-ATGATG--GAAATGCAGACCCGGCTGT 567
|| |||| || || || | ||||| ||||| | |||||| | | | ||| |||| | |
Sbjct 448 GTAGGGA-ACGTG-AAGTAAACCCATTTGG-AGATGATGCTG-AGT-TAGAACCGG-TCT 501
Query 568 TAAC-GAGCAGGAAAACACTGTCATTAACTTTGAGGCCTATGAAGATATTCCCA-TCGAG 625
| || |||||||| || || | |||||| ||||| ||||||||||||||| ||| | |||
Sbjct 502 TTACGGAGCAGGAGAATACAGGCATTAATTTTGATGCCTATGAAGATATT-CCAGTTGAG 560
Query 626 ACAAGT-GGGGATAATGTGCCACCTCCTGTTAATACATTTGCAGAGATAGACCTCGGAGA 684
|| ||| ||||| | ||||| ||||||||||| ||||||||||| |||||||| || ||
Sbjct 561 ACCAGTGGGGGA-GACGTGCCTCCTCCTGTTAACACATTTGCAGACATAGACCTTGGGGA 619
Query 685 AGC-TCTCAATCTAAATATCCAGAGGTGCAAATACGTGAAGCCGACCCCTGTGCAGCGTA 743
|| | | ||||| || |||| ||||||||| ||||||| ||| || || || ||||||
Sbjct 620 TGCAT-TAAATCTGAACATCCGGAGGTGCAAGTACGTGAGGCCAACACCGGTACAGCGTC 678
Query 744 ATGCAATTCCCATATTGGC-TGCAGGA-AGGGATTTGATGGCTTGTGCTCAGACAGGCTC 801
|||| ||||| ||| | || |||| || |||||||||||||| ||||| |||||||| ||
Sbjct 679 ATGCTATTCCAATACT-GCTTGCA-GAGAGGGATTTGATGGCCTGTGCACAGACAGGGTC 736
Query 802 TGGGAAGACAGCTGCCTTTTGTTTTCCGATTATTAGTGGGATTATGAAGGATCAGCATAT 861
||||||||| ||||| ||||| ||||| || |||||||| || ||||| |||| |||| |
Sbjct 737 TGGGAAGACGGCTGCTTTTTGCTTTCCAATAATTAGTGGAATCATGAAAGATCTGCATGT 796
Query 862 AGAGAGACCACGTGGAGTT--CGGG-GAGTCTATCCTCTTGCTGTCATTCTCTCACCAAC 918
| ||||||| ||| | ||| |||| | || || ||| |||| ||||| |||||||||||
Sbjct 797 ACAGAGACCCCGT-G-GTTCACGGGCG-GTTTACCCTTTTGCAGTCATCCTCTCACCAAC 853
Query 919 AAGGGAATTGGCTTGCCAGATACATGATGAAGCCAGAAAGTTCTCCTATCAAACTGGAGT 978
|||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| ||
Sbjct 854 AAGGGAATTGGCATGCCAGATACATGATGAAGCCAAAAAATTCTCCTACCAAACTGGTGT 913
Query 979 GAAAGTTGTGGTTGCTTACGGAGGAACACC-AGTCAACCAACAGATTAGGGAGCTTGAAA 1037
||| ||||| |||||||| ||||||||||| | || |||| ||| | ||||| || || |
Sbjct 914 GAAGGTTGTTGTTGCTTATGGAGGAACACCTATTC-ACCAGCAGCTCAGGGAACTCGAGA 972
Query 1038 GAGGAGTTGATATTCTTGTTGCAACTCCTGGGAGATTAAATGATTTGCTTGAGAGAGGTA 1097
| || |||||||| ||||| ||||||||||| | |||||||||||||| ||||||| ||
Sbjct 973 GGGGCGTTGATATCCTTGTGGCAACTCCTGGCCGGTTAAATGATTTGCTAGAGAGAGCTA 1032
Query 1098 GAGTCTCATTACAGATG-GTAAGATTCTTGGCACTTGATGAGGCGGACAGAATGCTGGAC 1156
|||||||| | ||||| ||| ||| || || ||||||||||| ||||| |||||||||
Sbjct 1033 GAGTCTCAATGGAGATGATTAA-ATTTTTAGCTCTTGATGAGGCAGACAGGATGCTGGAC 1091
Query 1157 ATGGGTTTTGAACCACAAATCAGGAAGATCGTTCAGCAGATGGACATGCCTCCTCCTGGT 1216
||||||||||| |||||||| || ||||| ||| | ||||||||||||||||| | |||
Sbjct 1092 ATGGGTTTTGAGCCACAAATTAGAAAGATTGTTGAACAGATGGACATGCCTCCACGTGGG 1151
Query 1217 GTCCGGCAGACAATGTTGTTCAGTGCTACATTTCCTAGGGAGATACAGAGACTTGCATCT 1276
|| | ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||
Sbjct 1152 GTGAGACAGACAATGTTGTTCAGTGCTACATTTCCAAGGGAGATCCAGAGACTTGCAGCT 1211
Query 1277 GATTTTC-TTTCAAATTACATATTTCTGGCTGTTGGAAGAGTGGGTTCAAGTACGGATTT 1335
|| |||| | ||||| || |||||| ||||||| |||||||| |||||||| || |||||
Sbjct 1212 GA-TTTCATGTCAAACTATATATTTTTGGCTGTGGGAAGAGTTGGTTCAAGCACTGATTT 1270
Query 1336 AATTGTCCAAAGAGTAGAGTTTGTTCATGATTCTGACAAAAGAAGCCATCTAATGGACCT 1395
|||| |||||| || |||||||| || || |||||||| ||||||||||| ||||||||
Sbjct 1271 AATTACCCAAAGGGTTGAGTTTGTCCAAGAGTCTGACAAGAGAAGCCATCTCATGGACCT 1330
Query 1396 TCTTCATGCCCAGAGGGAGAATGGTAACCAAGGA-AAGCAAGCTTTGAC-TCTAGTTTTT 1453
|||||||| |||| ||| | | | |||| || |||||| | ||||| | | ||||||
Sbjct 1331 GCTTCATGCGCAGA--GAG-A--G-ACCCAA-GACAAGCAATCATTGACAT-TGGTTTTT 1382
Query 1454 GTGGAGACAAAGAAGGGAGCTGACT-CTTTGGAGAATTGGTTGTGCATCAATG-GTTTCC 1511
||||||||||||| ||||||||| | ||||||| |||||| ||||||| |||| |||| |
Sbjct 1383 GTGGAGACAAAGAGGGGAGCTGA-TACTTTGGAAAATTGGCTGTGCATGAATGAGTTT-C 1440
Query 1512 CAGCAACGACCATTCATGGTGATAGGTCACAACAGGAAAGAGAAGTGGCACTGAGATCAT 1571
||||||| |||||||||| ||||| |||||||||||||||||||||||||||| || |
Sbjct 1441 CAGCAACCTCCATTCATGGCGATAGAACACAACAGGAAAGAGAAGTGGCACTGAGGTCCT 1500
Query 1572 TCAAGACTGGGCGGACACCTATTTTGGTTGCAACCGATGTGGCAGCACGTGGTCTTGACA 1631
|||| |||||| | |||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1501 TCAAAACTGGGAGAACACCTATTTTGGTTGCAACAGACGTGGCAGCACGTGGTCTTGACA 1560
Query 1632 TTCCGCACGTGGCTCATGTAGTGAACTTTGATCTACCAAACGACATTGATGACTATGTCC 1691
|||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||
Sbjct 1561 TTCCCCACGTGGCTCATGTTGTAAACTTTGATCTACCAAATGACATCGATGACTATGTCC 1620
Query 1692 ACCGTATCGGACGAACAGGACGTGCAGG-AAATTCAGGACTAGCAACTGCTTTCTTCAAT 1750
||||||||||||||||||||||||| || |||| | ||| |||||||||| ||||||||
Sbjct 1621 ACCGTATCGGACGAACAGGACGTGCCGGCAAAT-CGGGAATAGCAACTGCCTTCTTCAAC 1679
Query 1751 GACAACAA--CACAACAATGGCCAAGCCACTGGCTGAGCTAATGCAAGAAGCTAACCAGG 1808
|| ||||| ||||| | |||| | | | || |||||||| ||||||||||| || || |
Sbjct 1680 GAGAACAATGCACAA-A-TGGCTAGGTCGCTTGCTGAGCTGATGCAAGAAGCCAATCAAG 1737
Query 1809 AGGT-CCCTGACTGGCTGACTCGATACGCATCTCGTGCTTCATTTGGAGGTGGTAAGAAC 1867
|||| ||| || ||||| || |||||||| || |||||||||||||| |||||||||||
Sbjct 1738 AGGTGCCC-GAGTGGCTCACACGATACGCTTCACGTGCTTCATTTGGTGGTGGTAAGAAA 1796
Query 1868 CGGCGGTCTGGTGGACGGTTTGGTGGTCGTGACTTCAGGAGAGAAT-CTTTTA--GTCGA 1924
||| |||||||| ||||||||||| ||||||||||| || ||| || ||| || ||
Sbjct 1797 CGG---TCTGGTGGTCGGTTTGGTGGCCGTGACTTCAGAAGGGAAGGCTCTTACAGTAGA 1853
Query 1925 GGCGGTGGTGG 1935
|| || |||||
Sbjct 1854 GGAGGCGGTGG 1864
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 88178917175
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5